data_1F4R # _entry.id 1F4R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1F4R pdb_00001f4r 10.2210/pdb1f4r/pdb NDB PD0168 ? ? RCSB RCSB011241 ? ? WWPDB D_1000011241 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-12-11 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_conn_type 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.conn_type_id' 17 4 'Structure model' '_struct_conn.id' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 4 'Structure model' '_struct_conn_type.id' 35 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1F4R _pdbx_database_status.recvd_initial_deposition_date 2000-06-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BNK ;Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: mechanisms for nucleotide flipping and base excision ; unspecified PDB 1EWN ;CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA ; unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lau, A.Y.' 1 'Wyatt, M.D.' 2 'Glassner, B.J.' 3 'Samson, L.D.' 4 'Ellenberger, T.' 5 # _citation.id primary _citation.title 'Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 97 _citation.page_first 13573 _citation.page_last 13578 _citation.year 2000 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11106395 _citation.pdbx_database_id_DOI 10.1073/pnas.97.25.13573 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lau, A.Y.' 1 ? primary 'Wyatt, M.D.' 2 ? primary 'Glassner, B.J.' 3 ? primary 'Samson, L.D.' 4 ? primary 'Ellenberger, T.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDA)P*TP*TP*GP*CP*CP*T)-3') ; 3990.618 1 ? ? ? 1,N6-ETHENOADENINE-DNA 2 polymer syn ;DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3') ; 3975.611 1 ? ? ? ? 3 polymer man '3-METHYL-ADENINE DNA GLYCOSYLASE' 24328.916 1 3.2.2.20 ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 48 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'AAG, ALKYLADENINE DNA GLYCOSYLASE' # _entity_name_sys.entity_id 3 _entity_name_sys.name E.C.3.2.2.20 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(DA)(DC)(DA)(DT)(DG)(EDA)(DT)(DT)(DG)(DC)(DC)(DT)' GACATGATTGCCT D ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DC)(DA)(DA)(DT)(DC)(DA)(DT)(DG)(DT)(DC)(DA)' GGCAATCATGTCA E ? 3 'polypeptide(L)' no no ;KGHLTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVY IIYGMYFCMNISSQGDGACVLLRALEPLEGLETMRQLRSTLRKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQD EAVWLERGPLEPSEPAVVAAARVGVGHAGEWARKPLRFYVRGSPWVSVVDRVAEQDTQA ; ;KGHLTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVY IIYGMYFCMNISSQGDGACVLLRALEPLEGLETMRQLRSTLRKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQD EAVWLERGPLEPSEPAVVAAARVGVGHAGEWARKPLRFYVRGSPWVSVVDRVAEQDTQA ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DC n 1 4 DA n 1 5 DT n 1 6 DG n 1 7 EDA n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DC n 1 12 DC n 1 13 DT n 2 1 DG n 2 2 DG n 2 3 DC n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DA n 2 9 DT n 2 10 DG n 2 11 DT n 2 12 DC n 2 13 DA n 3 1 LYS n 3 2 GLY n 3 3 HIS n 3 4 LEU n 3 5 THR n 3 6 ARG n 3 7 LEU n 3 8 GLY n 3 9 LEU n 3 10 GLU n 3 11 PHE n 3 12 PHE n 3 13 ASP n 3 14 GLN n 3 15 PRO n 3 16 ALA n 3 17 VAL n 3 18 PRO n 3 19 LEU n 3 20 ALA n 3 21 ARG n 3 22 ALA n 3 23 PHE n 3 24 LEU n 3 25 GLY n 3 26 GLN n 3 27 VAL n 3 28 LEU n 3 29 VAL n 3 30 ARG n 3 31 ARG n 3 32 LEU n 3 33 PRO n 3 34 ASN n 3 35 GLY n 3 36 THR n 3 37 GLU n 3 38 LEU n 3 39 ARG n 3 40 GLY n 3 41 ARG n 3 42 ILE n 3 43 VAL n 3 44 GLU n 3 45 THR n 3 46 GLU n 3 47 ALA n 3 48 TYR n 3 49 LEU n 3 50 GLY n 3 51 PRO n 3 52 GLU n 3 53 ASP n 3 54 GLU n 3 55 ALA n 3 56 ALA n 3 57 HIS n 3 58 SER n 3 59 ARG n 3 60 GLY n 3 61 GLY n 3 62 ARG n 3 63 GLN n 3 64 THR n 3 65 PRO n 3 66 ARG n 3 67 ASN n 3 68 ARG n 3 69 GLY n 3 70 MET n 3 71 PHE n 3 72 MET n 3 73 LYS n 3 74 PRO n 3 75 GLY n 3 76 THR n 3 77 LEU n 3 78 TYR n 3 79 VAL n 3 80 TYR n 3 81 ILE n 3 82 ILE n 3 83 TYR n 3 84 GLY n 3 85 MET n 3 86 TYR n 3 87 PHE n 3 88 CYS n 3 89 MET n 3 90 ASN n 3 91 ILE n 3 92 SER n 3 93 SER n 3 94 GLN n 3 95 GLY n 3 96 ASP n 3 97 GLY n 3 98 ALA n 3 99 CYS n 3 100 VAL n 3 101 LEU n 3 102 LEU n 3 103 ARG n 3 104 ALA n 3 105 LEU n 3 106 GLU n 3 107 PRO n 3 108 LEU n 3 109 GLU n 3 110 GLY n 3 111 LEU n 3 112 GLU n 3 113 THR n 3 114 MET n 3 115 ARG n 3 116 GLN n 3 117 LEU n 3 118 ARG n 3 119 SER n 3 120 THR n 3 121 LEU n 3 122 ARG n 3 123 LYS n 3 124 GLY n 3 125 THR n 3 126 ALA n 3 127 SER n 3 128 ARG n 3 129 VAL n 3 130 LEU n 3 131 LYS n 3 132 ASP n 3 133 ARG n 3 134 GLU n 3 135 LEU n 3 136 CYS n 3 137 SER n 3 138 GLY n 3 139 PRO n 3 140 SER n 3 141 LYS n 3 142 LEU n 3 143 CYS n 3 144 GLN n 3 145 ALA n 3 146 LEU n 3 147 ALA n 3 148 ILE n 3 149 ASN n 3 150 LYS n 3 151 SER n 3 152 PHE n 3 153 ASP n 3 154 GLN n 3 155 ARG n 3 156 ASP n 3 157 LEU n 3 158 ALA n 3 159 GLN n 3 160 ASP n 3 161 GLU n 3 162 ALA n 3 163 VAL n 3 164 TRP n 3 165 LEU n 3 166 GLU n 3 167 ARG n 3 168 GLY n 3 169 PRO n 3 170 LEU n 3 171 GLU n 3 172 PRO n 3 173 SER n 3 174 GLU n 3 175 PRO n 3 176 ALA n 3 177 VAL n 3 178 VAL n 3 179 ALA n 3 180 ALA n 3 181 ALA n 3 182 ARG n 3 183 VAL n 3 184 GLY n 3 185 VAL n 3 186 GLY n 3 187 HIS n 3 188 ALA n 3 189 GLY n 3 190 GLU n 3 191 TRP n 3 192 ALA n 3 193 ARG n 3 194 LYS n 3 195 PRO n 3 196 LEU n 3 197 ARG n 3 198 PHE n 3 199 TYR n 3 200 VAL n 3 201 ARG n 3 202 GLY n 3 203 SER n 3 204 PRO n 3 205 TRP n 3 206 VAL n 3 207 SER n 3 208 VAL n 3 209 VAL n 3 210 ASP n 3 211 ARG n 3 212 VAL n 3 213 ALA n 3 214 GLU n 3 215 GLN n 3 216 ASP n 3 217 THR n 3 218 GLN n 3 219 ALA n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PLM1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDA 'DNA linking' n "3-[2-DEOXY-RIBOFURANOSYL]-3H-1,3,4,5A,8-PENTAAZA-AS-INDACENE-5'-MONOPHOSPHATE" ? 'C12 H14 N5 O6 P' 355.243 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G D . n A 1 2 DA 2 2 2 DA A D . n A 1 3 DC 3 3 3 DC C D . n A 1 4 DA 4 4 4 DA A D . n A 1 5 DT 5 5 5 DT T D . n A 1 6 DG 6 6 6 DG G D . n A 1 7 EDA 7 7 7 EDA EDA D . n A 1 8 DT 8 8 8 DT T D . n A 1 9 DT 9 9 9 DT T D . n A 1 10 DG 10 10 10 DG G D . n A 1 11 DC 11 11 11 DC C D . n A 1 12 DC 12 12 12 DC C D . n A 1 13 DT 13 13 ? ? ? D . n B 2 1 DG 1 14 ? ? ? E . n B 2 2 DG 2 15 15 DG G E . n B 2 3 DC 3 16 16 DC C E . n B 2 4 DA 4 17 17 DA A E . n B 2 5 DA 5 18 18 DA A E . n B 2 6 DT 6 19 19 DT T E . n B 2 7 DC 7 20 20 DC C E . n B 2 8 DA 8 21 21 DA A E . n B 2 9 DT 9 22 22 DT T E . n B 2 10 DG 10 23 23 DG G E . n B 2 11 DT 11 24 24 DT T E . n B 2 12 DC 12 25 25 DC C E . n B 2 13 DA 13 26 26 DA A E . n C 3 1 LYS 1 80 ? ? ? A . n C 3 2 GLY 2 81 ? ? ? A . n C 3 3 HIS 3 82 82 HIS HIS A . n C 3 4 LEU 4 83 83 LEU LEU A . n C 3 5 THR 5 84 84 THR THR A . n C 3 6 ARG 6 85 85 ARG ARG A . n C 3 7 LEU 7 86 86 LEU LEU A . n C 3 8 GLY 8 87 87 GLY GLY A . n C 3 9 LEU 9 88 88 LEU LEU A . n C 3 10 GLU 10 89 89 GLU GLU A . n C 3 11 PHE 11 90 90 PHE PHE A . n C 3 12 PHE 12 91 91 PHE PHE A . n C 3 13 ASP 13 92 92 ASP ASP A . n C 3 14 GLN 14 93 93 GLN GLN A . n C 3 15 PRO 15 94 94 PRO PRO A . n C 3 16 ALA 16 95 95 ALA ALA A . n C 3 17 VAL 17 96 96 VAL VAL A . n C 3 18 PRO 18 97 97 PRO PRO A . n C 3 19 LEU 19 98 98 LEU LEU A . n C 3 20 ALA 20 99 99 ALA ALA A . n C 3 21 ARG 21 100 100 ARG ARG A . n C 3 22 ALA 22 101 101 ALA ALA A . n C 3 23 PHE 23 102 102 PHE PHE A . n C 3 24 LEU 24 103 103 LEU LEU A . n C 3 25 GLY 25 104 104 GLY GLY A . n C 3 26 GLN 26 105 105 GLN GLN A . n C 3 27 VAL 27 106 106 VAL VAL A . n C 3 28 LEU 28 107 107 LEU LEU A . n C 3 29 VAL 29 108 108 VAL VAL A . n C 3 30 ARG 30 109 109 ARG ARG A . n C 3 31 ARG 31 110 110 ARG ARG A . n C 3 32 LEU 32 111 111 LEU LEU A . n C 3 33 PRO 33 112 112 PRO PRO A . n C 3 34 ASN 34 113 113 ASN ASN A . n C 3 35 GLY 35 114 114 GLY GLY A . n C 3 36 THR 36 115 115 THR THR A . n C 3 37 GLU 37 116 116 GLU GLU A . n C 3 38 LEU 38 117 117 LEU LEU A . n C 3 39 ARG 39 118 118 ARG ARG A . n C 3 40 GLY 40 119 119 GLY GLY A . n C 3 41 ARG 41 120 120 ARG ARG A . n C 3 42 ILE 42 121 121 ILE ILE A . n C 3 43 VAL 43 122 122 VAL VAL A . n C 3 44 GLU 44 123 123 GLU GLU A . n C 3 45 THR 45 124 124 THR THR A . n C 3 46 GLU 46 125 125 GLU GLU A . n C 3 47 ALA 47 126 126 ALA ALA A . n C 3 48 TYR 48 127 127 TYR TYR A . n C 3 49 LEU 49 128 128 LEU LEU A . n C 3 50 GLY 50 129 129 GLY GLY A . n C 3 51 PRO 51 130 130 PRO PRO A . n C 3 52 GLU 52 131 131 GLU GLU A . n C 3 53 ASP 53 132 132 ASP ASP A . n C 3 54 GLU 54 133 133 GLU GLU A . n C 3 55 ALA 55 134 134 ALA ALA A . n C 3 56 ALA 56 135 135 ALA ALA A . n C 3 57 HIS 57 136 136 HIS HIS A . n C 3 58 SER 58 137 137 SER SER A . n C 3 59 ARG 59 138 138 ARG ARG A . n C 3 60 GLY 60 139 139 GLY GLY A . n C 3 61 GLY 61 140 140 GLY GLY A . n C 3 62 ARG 62 141 141 ARG ARG A . n C 3 63 GLN 63 142 142 GLN GLN A . n C 3 64 THR 64 143 143 THR THR A . n C 3 65 PRO 65 144 144 PRO PRO A . n C 3 66 ARG 66 145 145 ARG ARG A . n C 3 67 ASN 67 146 146 ASN ASN A . n C 3 68 ARG 68 147 147 ARG ARG A . n C 3 69 GLY 69 148 148 GLY GLY A . n C 3 70 MET 70 149 149 MET MET A . n C 3 71 PHE 71 150 150 PHE PHE A . n C 3 72 MET 72 151 151 MET MET A . n C 3 73 LYS 73 152 152 LYS LYS A . n C 3 74 PRO 74 153 153 PRO PRO A . n C 3 75 GLY 75 154 154 GLY GLY A . n C 3 76 THR 76 155 155 THR THR A . n C 3 77 LEU 77 156 156 LEU LEU A . n C 3 78 TYR 78 157 157 TYR TYR A . n C 3 79 VAL 79 158 158 VAL VAL A . n C 3 80 TYR 80 159 159 TYR TYR A . n C 3 81 ILE 81 160 160 ILE ILE A . n C 3 82 ILE 82 161 161 ILE ILE A . n C 3 83 TYR 83 162 162 TYR TYR A . n C 3 84 GLY 84 163 163 GLY GLY A . n C 3 85 MET 85 164 164 MET MET A . n C 3 86 TYR 86 165 165 TYR TYR A . n C 3 87 PHE 87 166 166 PHE PHE A . n C 3 88 CYS 88 167 167 CYS CYS A . n C 3 89 MET 89 168 168 MET MET A . n C 3 90 ASN 90 169 169 ASN ASN A . n C 3 91 ILE 91 170 170 ILE ILE A . n C 3 92 SER 92 171 171 SER SER A . n C 3 93 SER 93 172 172 SER SER A . n C 3 94 GLN 94 173 173 GLN GLN A . n C 3 95 GLY 95 174 174 GLY GLY A . n C 3 96 ASP 96 175 175 ASP ASP A . n C 3 97 GLY 97 176 176 GLY GLY A . n C 3 98 ALA 98 177 177 ALA ALA A . n C 3 99 CYS 99 178 178 CYS CYS A . n C 3 100 VAL 100 179 179 VAL VAL A . n C 3 101 LEU 101 180 180 LEU LEU A . n C 3 102 LEU 102 181 181 LEU LEU A . n C 3 103 ARG 103 182 182 ARG ARG A . n C 3 104 ALA 104 183 183 ALA ALA A . n C 3 105 LEU 105 184 184 LEU LEU A . n C 3 106 GLU 106 185 185 GLU GLU A . n C 3 107 PRO 107 186 186 PRO PRO A . n C 3 108 LEU 108 187 187 LEU LEU A . n C 3 109 GLU 109 188 188 GLU GLU A . n C 3 110 GLY 110 189 189 GLY GLY A . n C 3 111 LEU 111 190 190 LEU LEU A . n C 3 112 GLU 112 191 191 GLU GLU A . n C 3 113 THR 113 192 192 THR THR A . n C 3 114 MET 114 193 193 MET MET A . n C 3 115 ARG 115 194 194 ARG ARG A . n C 3 116 GLN 116 195 195 GLN GLN A . n C 3 117 LEU 117 196 196 LEU LEU A . n C 3 118 ARG 118 197 197 ARG ARG A . n C 3 119 SER 119 198 198 SER SER A . n C 3 120 THR 120 199 199 THR THR A . n C 3 121 LEU 121 200 ? ? ? A . n C 3 122 ARG 122 201 ? ? ? A . n C 3 123 LYS 123 202 ? ? ? A . n C 3 124 GLY 124 203 ? ? ? A . n C 3 125 THR 125 204 ? ? ? A . n C 3 126 ALA 126 205 ? ? ? A . n C 3 127 SER 127 206 ? ? ? A . n C 3 128 ARG 128 207 ? ? ? A . n C 3 129 VAL 129 208 208 VAL VAL A . n C 3 130 LEU 130 209 209 LEU LEU A . n C 3 131 LYS 131 210 210 LYS LYS A . n C 3 132 ASP 132 211 211 ASP ASP A . n C 3 133 ARG 133 212 212 ARG ARG A . n C 3 134 GLU 134 213 213 GLU GLU A . n C 3 135 LEU 135 214 214 LEU LEU A . n C 3 136 CYS 136 215 215 CYS CYS A . n C 3 137 SER 137 216 216 SER SER A . n C 3 138 GLY 138 217 217 GLY GLY A . n C 3 139 PRO 139 218 218 PRO PRO A . n C 3 140 SER 140 219 219 SER SER A . n C 3 141 LYS 141 220 220 LYS LYS A . n C 3 142 LEU 142 221 221 LEU LEU A . n C 3 143 CYS 143 222 222 CYS CYS A . n C 3 144 GLN 144 223 223 GLN GLN A . n C 3 145 ALA 145 224 224 ALA ALA A . n C 3 146 LEU 146 225 225 LEU LEU A . n C 3 147 ALA 147 226 226 ALA ALA A . n C 3 148 ILE 148 227 227 ILE ILE A . n C 3 149 ASN 149 228 228 ASN ASN A . n C 3 150 LYS 150 229 229 LYS LYS A . n C 3 151 SER 151 230 230 SER SER A . n C 3 152 PHE 152 231 231 PHE PHE A . n C 3 153 ASP 153 232 232 ASP ASP A . n C 3 154 GLN 154 233 233 GLN GLN A . n C 3 155 ARG 155 234 234 ARG ARG A . n C 3 156 ASP 156 235 235 ASP ASP A . n C 3 157 LEU 157 236 236 LEU LEU A . n C 3 158 ALA 158 237 237 ALA ALA A . n C 3 159 GLN 159 238 238 GLN GLN A . n C 3 160 ASP 160 239 239 ASP ASP A . n C 3 161 GLU 161 240 240 GLU GLU A . n C 3 162 ALA 162 241 241 ALA ALA A . n C 3 163 VAL 163 242 242 VAL VAL A . n C 3 164 TRP 164 243 243 TRP TRP A . n C 3 165 LEU 165 244 244 LEU LEU A . n C 3 166 GLU 166 245 245 GLU GLU A . n C 3 167 ARG 167 246 246 ARG ARG A . n C 3 168 GLY 168 247 247 GLY GLY A . n C 3 169 PRO 169 248 248 PRO PRO A . n C 3 170 LEU 170 249 ? ? ? A . n C 3 171 GLU 171 250 ? ? ? A . n C 3 172 PRO 172 251 ? ? ? A . n C 3 173 SER 173 252 ? ? ? A . n C 3 174 GLU 174 253 ? ? ? A . n C 3 175 PRO 175 254 ? ? ? A . n C 3 176 ALA 176 255 255 ALA ALA A . n C 3 177 VAL 177 256 256 VAL VAL A . n C 3 178 VAL 178 257 257 VAL VAL A . n C 3 179 ALA 179 258 258 ALA ALA A . n C 3 180 ALA 180 259 259 ALA ALA A . n C 3 181 ALA 181 260 260 ALA ALA A . n C 3 182 ARG 182 261 261 ARG ARG A . n C 3 183 VAL 183 262 262 VAL VAL A . n C 3 184 GLY 184 263 263 GLY GLY A . n C 3 185 VAL 185 264 264 VAL VAL A . n C 3 186 GLY 186 265 265 GLY GLY A . n C 3 187 HIS 187 266 266 HIS HIS A . n C 3 188 ALA 188 267 267 ALA ALA A . n C 3 189 GLY 189 268 268 GLY GLY A . n C 3 190 GLU 190 269 269 GLU GLU A . n C 3 191 TRP 191 270 270 TRP TRP A . n C 3 192 ALA 192 271 271 ALA ALA A . n C 3 193 ARG 193 272 272 ARG ARG A . n C 3 194 LYS 194 273 273 LYS LYS A . n C 3 195 PRO 195 274 274 PRO PRO A . n C 3 196 LEU 196 275 275 LEU LEU A . n C 3 197 ARG 197 276 276 ARG ARG A . n C 3 198 PHE 198 277 277 PHE PHE A . n C 3 199 TYR 199 278 278 TYR TYR A . n C 3 200 VAL 200 279 279 VAL VAL A . n C 3 201 ARG 201 280 280 ARG ARG A . n C 3 202 GLY 202 281 281 GLY GLY A . n C 3 203 SER 203 282 282 SER SER A . n C 3 204 PRO 204 283 283 PRO PRO A . n C 3 205 TRP 205 284 284 TRP TRP A . n C 3 206 VAL 206 285 285 VAL VAL A . n C 3 207 SER 207 286 286 SER SER A . n C 3 208 VAL 208 287 287 VAL VAL A . n C 3 209 VAL 209 288 288 VAL VAL A . n C 3 210 ASP 210 289 289 ASP ASP A . n C 3 211 ARG 211 290 290 ARG ARG A . n C 3 212 VAL 212 291 291 VAL VAL A . n C 3 213 ALA 213 292 292 ALA ALA A . n C 3 214 GLU 214 293 293 GLU GLU A . n C 3 215 GLN 215 294 294 GLN GLN A . n C 3 216 ASP 216 295 ? ? ? A . n C 3 217 THR 217 296 ? ? ? A . n C 3 218 GLN 218 297 ? ? ? A . n C 3 219 ALA 219 298 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 1001 1001 NA NA A . E 5 HOH 1 14 3 HOH HOH D . E 5 HOH 2 15 20 HOH HOH D . E 5 HOH 3 16 31 HOH HOH D . E 5 HOH 4 17 34 HOH HOH D . E 5 HOH 5 18 36 HOH HOH D . F 5 HOH 1 27 12 HOH HOH E . F 5 HOH 2 28 22 HOH HOH E . F 5 HOH 3 29 28 HOH HOH E . F 5 HOH 4 30 47 HOH HOH E . G 5 HOH 1 1 1 HOH HOH A . G 5 HOH 2 2 2 HOH HOH A . G 5 HOH 3 4 4 HOH HOH A . G 5 HOH 4 5 5 HOH HOH A . G 5 HOH 5 6 6 HOH HOH A . G 5 HOH 6 7 7 HOH HOH A . G 5 HOH 7 8 8 HOH HOH A . G 5 HOH 8 9 9 HOH HOH A . G 5 HOH 9 10 10 HOH HOH A . G 5 HOH 10 11 11 HOH HOH A . G 5 HOH 11 13 13 HOH HOH A . G 5 HOH 12 14 14 HOH HOH A . G 5 HOH 13 15 15 HOH HOH A . G 5 HOH 14 16 16 HOH HOH A . G 5 HOH 15 17 17 HOH HOH A . G 5 HOH 16 18 18 HOH HOH A . G 5 HOH 17 19 19 HOH HOH A . G 5 HOH 18 21 21 HOH HOH A . G 5 HOH 19 23 23 HOH HOH A . G 5 HOH 20 24 24 HOH HOH A . G 5 HOH 21 25 25 HOH HOH A . G 5 HOH 22 26 26 HOH HOH A . G 5 HOH 23 27 27 HOH HOH A . G 5 HOH 24 29 29 HOH HOH A . G 5 HOH 25 30 30 HOH HOH A . G 5 HOH 26 32 32 HOH HOH A . G 5 HOH 27 33 33 HOH HOH A . G 5 HOH 28 35 35 HOH HOH A . G 5 HOH 29 37 37 HOH HOH A . G 5 HOH 30 38 38 HOH HOH A . G 5 HOH 31 39 39 HOH HOH A . G 5 HOH 32 40 40 HOH HOH A . G 5 HOH 33 41 41 HOH HOH A . G 5 HOH 34 42 42 HOH HOH A . G 5 HOH 35 43 43 HOH HOH A . G 5 HOH 36 44 44 HOH HOH A . G 5 HOH 37 45 45 HOH HOH A . G 5 HOH 38 46 46 HOH HOH A . G 5 HOH 39 48 48 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 82 ? CG ? C HIS 3 CG 2 1 Y 1 A HIS 82 ? ND1 ? C HIS 3 ND1 3 1 Y 1 A HIS 82 ? CD2 ? C HIS 3 CD2 4 1 Y 1 A HIS 82 ? CE1 ? C HIS 3 CE1 5 1 Y 1 A HIS 82 ? NE2 ? C HIS 3 NE2 6 1 Y 1 A GLU 131 ? CG ? C GLU 52 CG 7 1 Y 1 A GLU 131 ? CD ? C GLU 52 CD 8 1 Y 1 A GLU 131 ? OE1 ? C GLU 52 OE1 9 1 Y 1 A GLU 131 ? OE2 ? C GLU 52 OE2 10 1 Y 1 A THR 199 ? OG1 ? C THR 120 OG1 11 1 Y 1 A THR 199 ? CG2 ? C THR 120 CG2 12 1 Y 1 A VAL 208 ? CG1 ? C VAL 129 CG1 13 1 Y 1 A VAL 208 ? CG2 ? C VAL 129 CG2 14 1 Y 1 A LYS 210 ? CG ? C LYS 131 CG 15 1 Y 1 A LYS 210 ? CD ? C LYS 131 CD 16 1 Y 1 A LYS 210 ? CE ? C LYS 131 CE 17 1 Y 1 A LYS 210 ? NZ ? C LYS 131 NZ 18 1 Y 1 A GLN 238 ? CG ? C GLN 159 CG 19 1 Y 1 A GLN 238 ? CD ? C GLN 159 CD 20 1 Y 1 A GLN 238 ? OE1 ? C GLN 159 OE1 21 1 Y 1 A GLN 238 ? NE2 ? C GLN 159 NE2 22 1 Y 1 A GLU 240 ? CG ? C GLU 161 CG 23 1 Y 1 A GLU 240 ? CD ? C GLU 161 CD 24 1 Y 1 A GLU 240 ? OE1 ? C GLU 161 OE1 25 1 Y 1 A GLU 240 ? OE2 ? C GLU 161 OE2 26 1 Y 1 A GLU 269 ? CG ? C GLU 190 CG 27 1 Y 1 A GLU 269 ? CD ? C GLU 190 CD 28 1 Y 1 A GLU 269 ? OE1 ? C GLU 190 OE1 29 1 Y 1 A GLU 269 ? OE2 ? C GLU 190 OE2 30 1 Y 1 A GLN 294 ? CG ? C GLN 215 CG 31 1 Y 1 A GLN 294 ? CD ? C GLN 215 CD 32 1 Y 1 A GLN 294 ? OE1 ? C GLN 215 OE1 33 1 Y 1 A GLN 294 ? NE2 ? C GLN 215 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1F4R _cell.length_a 42.1 _cell.length_b 57.3 _cell.length_c 125.5 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F4R _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 # _exptl.entry_id 1F4R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.03 _exptl_crystal.density_Matthews 2.32 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'PEG 4000, magnesium chloride, Tris-HCl, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 MgCl2 ? ? ? 1 3 2 'PEG 4000' ? ? ? 1 4 2 MgCl2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type PHILLIPS _diffrn_detector.pdbx_collection_date 1999-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.01 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_wavelength 1.01 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1F4R _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 500 _reflns.d_resolution_high 2.4 _reflns.number_obs 12526 _reflns.number_all 12607 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.0430000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 55.4 _reflns.B_iso_Wilson_estimate 45.6 _reflns.pdbx_redundancy 8.0 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.51 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.1370000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.number_unique_all 1478 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1F4R _refine.ls_number_reflns_obs 12526 _refine.ls_number_reflns_all 12607 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 500 _refine.ls_d_res_high 2.4 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2390000 _refine.ls_R_factor_R_free 0.2760000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 1227 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;Used Powell conjugate gradient minimization and torsion angle-restrained molecular dynamics ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1525 _refine_hist.pdbx_number_atoms_nucleic_acid 490 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 2064 _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 500 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.20 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1F4R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1F4R _struct.title 'CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1F4R _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP 3MG_HUMAN P29372 3 80 ? ? 2 PDB 1F4R 1F4R 1 ? ? ? 3 PDB 1F4R 1F4R 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1F4R A 1 ? 219 ? P29372 80 ? 298 ? 80 298 2 2 1F4R D 1 ? 13 ? 1F4R 1 ? 13 ? 1 13 3 3 1F4R E 1 ? 13 ? 1F4R 14 ? 26 ? 14 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY C 8 ? ASP C 13 ? GLY A 87 ASP A 92 1 ? 6 HELX_P HELX_P2 2 PRO C 15 ? LEU C 24 ? PRO A 94 LEU A 103 1 ? 10 HELX_P HELX_P3 3 SER C 58 ? ARG C 62 ? SER A 137 ARG A 141 5 ? 5 HELX_P HELX_P4 4 ASN C 67 ? MET C 72 ? ASN A 146 MET A 151 1 ? 6 HELX_P HELX_P5 5 GLY C 110 ? ARG C 118 ? GLY A 189 ARG A 197 1 ? 9 HELX_P HELX_P6 6 LYS C 131 ? LEU C 135 ? LYS A 210 LEU A 214 5 ? 5 HELX_P HELX_P7 7 GLY C 138 ? LEU C 146 ? GLY A 217 LEU A 225 1 ? 9 HELX_P HELX_P8 8 ASN C 149 ? ASP C 153 ? ASN A 228 ASP A 232 5 ? 5 HELX_P HELX_P9 9 GLY C 189 ? LYS C 194 ? GLY A 268 LYS A 273 1 ? 6 HELX_P HELX_P10 10 ASP C 210 ? GLN C 215 ? ASP A 289 GLN A 294 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 6 "O3'" ? ? ? 1_555 A EDA 7 P ? ? D DG 6 D EDA 7 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale2 covale both ? A EDA 7 "O3'" ? ? ? 1_555 A DT 8 P ? ? D EDA 7 D DT 8 1_555 ? ? ? ? ? ? ? 1.612 ? ? metalc1 metalc ? ? G HOH . O ? ? ? 1_555 D NA . NA ? ? A HOH 42 A NA 1001 1_555 ? ? ? ? ? ? ? 2.578 ? ? metalc2 metalc ? ? C MET 70 O ? ? ? 1_555 D NA . NA ? ? A MET 149 A NA 1001 1_555 ? ? ? ? ? ? ? 2.514 ? ? metalc3 metalc ? ? C SER 92 OG ? ? ? 1_555 D NA . NA ? ? A SER 171 A NA 1001 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc4 metalc ? ? C SER 93 O ? ? ? 1_555 D NA . NA ? ? A SER 172 A NA 1001 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc5 metalc ? ? C GLY 95 O ? ? ? 1_555 D NA . NA ? ? A GLY 174 A NA 1001 1_555 ? ? ? ? ? ? ? 2.569 ? ? metalc6 metalc ? ? C ALA 98 O ? ? ? 1_555 D NA . NA ? ? A ALA 177 A NA 1001 1_555 ? ? ? ? ? ? ? 2.549 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 12 N3 ? ? D DG 1 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 12 O2 ? ? D DG 1 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 12 N4 ? ? D DG 1 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 11 N3 ? ? D DA 2 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 11 O4 ? ? D DA 2 E DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? D DC 3 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? D DC 3 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? D DC 3 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? D DA 4 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? D DA 4 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 8 N1 ? ? D DT 5 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 8 N6 ? ? D DT 5 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 7 N3 ? ? D DG 6 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 7 O2 ? ? D DG 6 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 7 N4 ? ? D DG 6 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? D DT 8 E DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? D DT 8 E DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 4 N1 ? ? D DT 9 E DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 4 N6 ? ? D DT 9 E DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? D DG 10 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? D DG 10 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? D DG 10 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? D DC 11 E DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? D DC 11 E DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? D DC 11 E DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? G HOH . ? A HOH 42 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C MET 70 ? A MET 149 ? 1_555 84.8 ? 2 O ? G HOH . ? A HOH 42 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 OG ? C SER 92 ? A SER 171 ? 1_555 84.8 ? 3 O ? C MET 70 ? A MET 149 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 OG ? C SER 92 ? A SER 171 ? 1_555 84.0 ? 4 O ? G HOH . ? A HOH 42 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C SER 93 ? A SER 172 ? 1_555 89.9 ? 5 O ? C MET 70 ? A MET 149 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C SER 93 ? A SER 172 ? 1_555 174.7 ? 6 OG ? C SER 92 ? A SER 171 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C SER 93 ? A SER 172 ? 1_555 94.9 ? 7 O ? G HOH . ? A HOH 42 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C GLY 95 ? A GLY 174 ? 1_555 80.8 ? 8 O ? C MET 70 ? A MET 149 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C GLY 95 ? A GLY 174 ? 1_555 96.0 ? 9 OG ? C SER 92 ? A SER 171 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C GLY 95 ? A GLY 174 ? 1_555 165.5 ? 10 O ? C SER 93 ? A SER 172 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C GLY 95 ? A GLY 174 ? 1_555 83.7 ? 11 O ? G HOH . ? A HOH 42 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C ALA 98 ? A ALA 177 ? 1_555 170.6 ? 12 O ? C MET 70 ? A MET 149 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C ALA 98 ? A ALA 177 ? 1_555 92.1 ? 13 OG ? C SER 92 ? A SER 171 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C ALA 98 ? A ALA 177 ? 1_555 103.7 ? 14 O ? C SER 93 ? A SER 172 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C ALA 98 ? A ALA 177 ? 1_555 93.2 ? 15 O ? C GLY 95 ? A GLY 174 ? 1_555 NA ? D NA . ? A NA 1001 ? 1_555 O ? C ALA 98 ? A ALA 177 ? 1_555 90.8 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU C 77 ? ILE C 82 ? LEU A 156 ILE A 161 A 2 TYR C 86 ? SER C 92 ? TYR A 165 SER A 171 A 3 CYS C 99 ? GLU C 109 ? CYS A 178 GLU A 188 A 4 GLU C 37 ? TYR C 48 ? GLU A 116 TYR A 127 A 5 VAL C 27 ? ARG C 31 ? VAL A 106 ARG A 110 A 6 VAL C 163 ? GLU C 166 ? VAL A 242 GLU A 245 B 1 LEU C 77 ? ILE C 82 ? LEU A 156 ILE A 161 B 2 TYR C 86 ? SER C 92 ? TYR A 165 SER A 171 B 3 CYS C 99 ? GLU C 109 ? CYS A 178 GLU A 188 B 4 GLU C 37 ? TYR C 48 ? GLU A 116 TYR A 127 B 5 ARG C 197 ? VAL C 200 ? ARG A 276 VAL A 279 B 6 VAL C 177 ? ALA C 180 ? VAL A 256 ALA A 259 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE C 82 ? N ILE A 161 O TYR C 86 ? O TYR A 165 A 2 3 O ILE C 91 ? O ILE A 170 N VAL C 100 ? N VAL A 179 A 3 4 N LEU C 108 ? N LEU A 187 O ARG C 39 ? O ARG A 118 A 4 5 O GLY C 40 ? O GLY A 119 N LEU C 28 ? N LEU A 107 A 5 6 N VAL C 29 ? N VAL A 108 O TRP C 164 ? O TRP A 243 B 1 2 N ILE C 82 ? N ILE A 161 O TYR C 86 ? O TYR A 165 B 2 3 O ILE C 91 ? O ILE A 170 N VAL C 100 ? N VAL A 179 B 3 4 N LEU C 108 ? N LEU A 187 O ARG C 39 ? O ARG A 118 B 4 5 O THR C 45 ? O THR A 124 N PHE C 198 ? N PHE A 277 B 5 6 O TYR C 199 ? O TYR A 278 N VAL C 178 ? N VAL A 257 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 1001 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE NA A 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH G . ? HOH A 42 . ? 1_555 ? 2 AC1 6 MET C 70 ? MET A 149 . ? 1_555 ? 3 AC1 6 SER C 92 ? SER A 171 . ? 1_555 ? 4 AC1 6 SER C 93 ? SER A 172 . ? 1_555 ? 5 AC1 6 GLY C 95 ? GLY A 174 . ? 1_555 ? 6 AC1 6 ALA C 98 ? ALA A 177 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 164 ? ? -161.84 -23.79 2 1 ASP A 211 ? ? -39.79 -31.60 3 1 GLN A 238 ? ? -144.74 52.22 4 1 HIS A 266 ? ? -119.15 50.34 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 127 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.063 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id EDA _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id D _pdbx_struct_mod_residue.auth_comp_id EDA _pdbx_struct_mod_residue.auth_seq_id 7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DA _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D DT 13 ? A DT 13 2 1 Y 1 E DG 14 ? B DG 1 3 1 Y 1 A LYS 80 ? C LYS 1 4 1 Y 1 A GLY 81 ? C GLY 2 5 1 Y 1 A LEU 200 ? C LEU 121 6 1 Y 1 A ARG 201 ? C ARG 122 7 1 Y 1 A LYS 202 ? C LYS 123 8 1 Y 1 A GLY 203 ? C GLY 124 9 1 Y 1 A THR 204 ? C THR 125 10 1 Y 1 A ALA 205 ? C ALA 126 11 1 Y 1 A SER 206 ? C SER 127 12 1 Y 1 A ARG 207 ? C ARG 128 13 1 Y 1 A LEU 249 ? C LEU 170 14 1 Y 1 A GLU 250 ? C GLU 171 15 1 Y 1 A PRO 251 ? C PRO 172 16 1 Y 1 A SER 252 ? C SER 173 17 1 Y 1 A GLU 253 ? C GLU 174 18 1 Y 1 A PRO 254 ? C PRO 175 19 1 Y 1 A ASP 295 ? C ASP 216 20 1 Y 1 A THR 296 ? C THR 217 21 1 Y 1 A GLN 297 ? C GLN 218 22 1 Y 1 A ALA 298 ? C ALA 219 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDA P P N N 231 EDA OP1 O N N 232 EDA OP2 O N N 233 EDA OP3 O N N 234 EDA "O5'" O N N 235 EDA N9 N Y N 236 EDA C4 C Y N 237 EDA N3 N Y N 238 EDA C2 C Y N 239 EDA N1 N Y N 240 EDA C6 C Y N 241 EDA C10 C Y N 242 EDA C11 C Y N 243 EDA N6 N Y N 244 EDA C5 C Y N 245 EDA N7 N Y N 246 EDA C8 C Y N 247 EDA "C2'" C N N 248 EDA "C5'" C N N 249 EDA "C4'" C N R 250 EDA "O4'" O N N 251 EDA "C1'" C N R 252 EDA "C3'" C N S 253 EDA "O3'" O N N 254 EDA HOP2 H N N 255 EDA HOP3 H N N 256 EDA H2 H N N 257 EDA H10 H N N 258 EDA H11 H N N 259 EDA H8 H N N 260 EDA "H2'" H N N 261 EDA "H2''" H N N 262 EDA "H5'" H N N 263 EDA "H5''" H N N 264 EDA "H4'" H N N 265 EDA "H1'" H N N 266 EDA "H3'" H N N 267 EDA "HO3'" H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 ILE N N N N 342 ILE CA C N S 343 ILE C C N N 344 ILE O O N N 345 ILE CB C N S 346 ILE CG1 C N N 347 ILE CG2 C N N 348 ILE CD1 C N N 349 ILE OXT O N N 350 ILE H H N N 351 ILE H2 H N N 352 ILE HA H N N 353 ILE HB H N N 354 ILE HG12 H N N 355 ILE HG13 H N N 356 ILE HG21 H N N 357 ILE HG22 H N N 358 ILE HG23 H N N 359 ILE HD11 H N N 360 ILE HD12 H N N 361 ILE HD13 H N N 362 ILE HXT H N N 363 LEU N N N N 364 LEU CA C N S 365 LEU C C N N 366 LEU O O N N 367 LEU CB C N N 368 LEU CG C N N 369 LEU CD1 C N N 370 LEU CD2 C N N 371 LEU OXT O N N 372 LEU H H N N 373 LEU H2 H N N 374 LEU HA H N N 375 LEU HB2 H N N 376 LEU HB3 H N N 377 LEU HG H N N 378 LEU HD11 H N N 379 LEU HD12 H N N 380 LEU HD13 H N N 381 LEU HD21 H N N 382 LEU HD22 H N N 383 LEU HD23 H N N 384 LEU HXT H N N 385 LYS N N N N 386 LYS CA C N S 387 LYS C C N N 388 LYS O O N N 389 LYS CB C N N 390 LYS CG C N N 391 LYS CD C N N 392 LYS CE C N N 393 LYS NZ N N N 394 LYS OXT O N N 395 LYS H H N N 396 LYS H2 H N N 397 LYS HA H N N 398 LYS HB2 H N N 399 LYS HB3 H N N 400 LYS HG2 H N N 401 LYS HG3 H N N 402 LYS HD2 H N N 403 LYS HD3 H N N 404 LYS HE2 H N N 405 LYS HE3 H N N 406 LYS HZ1 H N N 407 LYS HZ2 H N N 408 LYS HZ3 H N N 409 LYS HXT H N N 410 MET N N N N 411 MET CA C N S 412 MET C C N N 413 MET O O N N 414 MET CB C N N 415 MET CG C N N 416 MET SD S N N 417 MET CE C N N 418 MET OXT O N N 419 MET H H N N 420 MET H2 H N N 421 MET HA H N N 422 MET HB2 H N N 423 MET HB3 H N N 424 MET HG2 H N N 425 MET HG3 H N N 426 MET HE1 H N N 427 MET HE2 H N N 428 MET HE3 H N N 429 MET HXT H N N 430 NA NA NA N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TRP N N N N 503 TRP CA C N S 504 TRP C C N N 505 TRP O O N N 506 TRP CB C N N 507 TRP CG C Y N 508 TRP CD1 C Y N 509 TRP CD2 C Y N 510 TRP NE1 N Y N 511 TRP CE2 C Y N 512 TRP CE3 C Y N 513 TRP CZ2 C Y N 514 TRP CZ3 C Y N 515 TRP CH2 C Y N 516 TRP OXT O N N 517 TRP H H N N 518 TRP H2 H N N 519 TRP HA H N N 520 TRP HB2 H N N 521 TRP HB3 H N N 522 TRP HD1 H N N 523 TRP HE1 H N N 524 TRP HE3 H N N 525 TRP HZ2 H N N 526 TRP HZ3 H N N 527 TRP HH2 H N N 528 TRP HXT H N N 529 TYR N N N N 530 TYR CA C N S 531 TYR C C N N 532 TYR O O N N 533 TYR CB C N N 534 TYR CG C Y N 535 TYR CD1 C Y N 536 TYR CD2 C Y N 537 TYR CE1 C Y N 538 TYR CE2 C Y N 539 TYR CZ C Y N 540 TYR OH O N N 541 TYR OXT O N N 542 TYR H H N N 543 TYR H2 H N N 544 TYR HA H N N 545 TYR HB2 H N N 546 TYR HB3 H N N 547 TYR HD1 H N N 548 TYR HD2 H N N 549 TYR HE1 H N N 550 TYR HE2 H N N 551 TYR HH H N N 552 TYR HXT H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDA P OP1 doub N N 232 EDA P OP2 sing N N 233 EDA P OP3 sing N N 234 EDA P "O5'" sing N N 235 EDA OP2 HOP2 sing N N 236 EDA OP3 HOP3 sing N N 237 EDA "O5'" "C5'" sing N N 238 EDA N9 C4 sing Y N 239 EDA N9 C8 sing Y N 240 EDA N9 "C1'" sing N N 241 EDA C4 N3 sing Y N 242 EDA C4 C5 doub Y N 243 EDA N3 C2 doub Y N 244 EDA C2 N1 sing Y N 245 EDA C2 H2 sing N N 246 EDA N1 C6 sing Y N 247 EDA N1 C10 sing Y N 248 EDA C6 N6 doub Y N 249 EDA C6 C5 sing Y N 250 EDA C10 C11 doub Y N 251 EDA C10 H10 sing N N 252 EDA C11 N6 sing Y N 253 EDA C11 H11 sing N N 254 EDA C5 N7 sing Y N 255 EDA N7 C8 doub Y N 256 EDA C8 H8 sing N N 257 EDA "C2'" "C1'" sing N N 258 EDA "C2'" "C3'" sing N N 259 EDA "C2'" "H2'" sing N N 260 EDA "C2'" "H2''" sing N N 261 EDA "C5'" "C4'" sing N N 262 EDA "C5'" "H5'" sing N N 263 EDA "C5'" "H5''" sing N N 264 EDA "C4'" "O4'" sing N N 265 EDA "C4'" "C3'" sing N N 266 EDA "C4'" "H4'" sing N N 267 EDA "O4'" "C1'" sing N N 268 EDA "C1'" "H1'" sing N N 269 EDA "C3'" "O3'" sing N N 270 EDA "C3'" "H3'" sing N N 271 EDA "O3'" "HO3'" sing N N 272 GLN N CA sing N N 273 GLN N H sing N N 274 GLN N H2 sing N N 275 GLN CA C sing N N 276 GLN CA CB sing N N 277 GLN CA HA sing N N 278 GLN C O doub N N 279 GLN C OXT sing N N 280 GLN CB CG sing N N 281 GLN CB HB2 sing N N 282 GLN CB HB3 sing N N 283 GLN CG CD sing N N 284 GLN CG HG2 sing N N 285 GLN CG HG3 sing N N 286 GLN CD OE1 doub N N 287 GLN CD NE2 sing N N 288 GLN NE2 HE21 sing N N 289 GLN NE2 HE22 sing N N 290 GLN OXT HXT sing N N 291 GLU N CA sing N N 292 GLU N H sing N N 293 GLU N H2 sing N N 294 GLU CA C sing N N 295 GLU CA CB sing N N 296 GLU CA HA sing N N 297 GLU C O doub N N 298 GLU C OXT sing N N 299 GLU CB CG sing N N 300 GLU CB HB2 sing N N 301 GLU CB HB3 sing N N 302 GLU CG CD sing N N 303 GLU CG HG2 sing N N 304 GLU CG HG3 sing N N 305 GLU CD OE1 doub N N 306 GLU CD OE2 sing N N 307 GLU OE2 HE2 sing N N 308 GLU OXT HXT sing N N 309 GLY N CA sing N N 310 GLY N H sing N N 311 GLY N H2 sing N N 312 GLY CA C sing N N 313 GLY CA HA2 sing N N 314 GLY CA HA3 sing N N 315 GLY C O doub N N 316 GLY C OXT sing N N 317 GLY OXT HXT sing N N 318 HIS N CA sing N N 319 HIS N H sing N N 320 HIS N H2 sing N N 321 HIS CA C sing N N 322 HIS CA CB sing N N 323 HIS CA HA sing N N 324 HIS C O doub N N 325 HIS C OXT sing N N 326 HIS CB CG sing N N 327 HIS CB HB2 sing N N 328 HIS CB HB3 sing N N 329 HIS CG ND1 sing Y N 330 HIS CG CD2 doub Y N 331 HIS ND1 CE1 doub Y N 332 HIS ND1 HD1 sing N N 333 HIS CD2 NE2 sing Y N 334 HIS CD2 HD2 sing N N 335 HIS CE1 NE2 sing Y N 336 HIS CE1 HE1 sing N N 337 HIS NE2 HE2 sing N N 338 HIS OXT HXT sing N N 339 HOH O H1 sing N N 340 HOH O H2 sing N N 341 ILE N CA sing N N 342 ILE N H sing N N 343 ILE N H2 sing N N 344 ILE CA C sing N N 345 ILE CA CB sing N N 346 ILE CA HA sing N N 347 ILE C O doub N N 348 ILE C OXT sing N N 349 ILE CB CG1 sing N N 350 ILE CB CG2 sing N N 351 ILE CB HB sing N N 352 ILE CG1 CD1 sing N N 353 ILE CG1 HG12 sing N N 354 ILE CG1 HG13 sing N N 355 ILE CG2 HG21 sing N N 356 ILE CG2 HG22 sing N N 357 ILE CG2 HG23 sing N N 358 ILE CD1 HD11 sing N N 359 ILE CD1 HD12 sing N N 360 ILE CD1 HD13 sing N N 361 ILE OXT HXT sing N N 362 LEU N CA sing N N 363 LEU N H sing N N 364 LEU N H2 sing N N 365 LEU CA C sing N N 366 LEU CA CB sing N N 367 LEU CA HA sing N N 368 LEU C O doub N N 369 LEU C OXT sing N N 370 LEU CB CG sing N N 371 LEU CB HB2 sing N N 372 LEU CB HB3 sing N N 373 LEU CG CD1 sing N N 374 LEU CG CD2 sing N N 375 LEU CG HG sing N N 376 LEU CD1 HD11 sing N N 377 LEU CD1 HD12 sing N N 378 LEU CD1 HD13 sing N N 379 LEU CD2 HD21 sing N N 380 LEU CD2 HD22 sing N N 381 LEU CD2 HD23 sing N N 382 LEU OXT HXT sing N N 383 LYS N CA sing N N 384 LYS N H sing N N 385 LYS N H2 sing N N 386 LYS CA C sing N N 387 LYS CA CB sing N N 388 LYS CA HA sing N N 389 LYS C O doub N N 390 LYS C OXT sing N N 391 LYS CB CG sing N N 392 LYS CB HB2 sing N N 393 LYS CB HB3 sing N N 394 LYS CG CD sing N N 395 LYS CG HG2 sing N N 396 LYS CG HG3 sing N N 397 LYS CD CE sing N N 398 LYS CD HD2 sing N N 399 LYS CD HD3 sing N N 400 LYS CE NZ sing N N 401 LYS CE HE2 sing N N 402 LYS CE HE3 sing N N 403 LYS NZ HZ1 sing N N 404 LYS NZ HZ2 sing N N 405 LYS NZ HZ3 sing N N 406 LYS OXT HXT sing N N 407 MET N CA sing N N 408 MET N H sing N N 409 MET N H2 sing N N 410 MET CA C sing N N 411 MET CA CB sing N N 412 MET CA HA sing N N 413 MET C O doub N N 414 MET C OXT sing N N 415 MET CB CG sing N N 416 MET CB HB2 sing N N 417 MET CB HB3 sing N N 418 MET CG SD sing N N 419 MET CG HG2 sing N N 420 MET CG HG3 sing N N 421 MET SD CE sing N N 422 MET CE HE1 sing N N 423 MET CE HE2 sing N N 424 MET CE HE3 sing N N 425 MET OXT HXT sing N N 426 PHE N CA sing N N 427 PHE N H sing N N 428 PHE N H2 sing N N 429 PHE CA C sing N N 430 PHE CA CB sing N N 431 PHE CA HA sing N N 432 PHE C O doub N N 433 PHE C OXT sing N N 434 PHE CB CG sing N N 435 PHE CB HB2 sing N N 436 PHE CB HB3 sing N N 437 PHE CG CD1 doub Y N 438 PHE CG CD2 sing Y N 439 PHE CD1 CE1 sing Y N 440 PHE CD1 HD1 sing N N 441 PHE CD2 CE2 doub Y N 442 PHE CD2 HD2 sing N N 443 PHE CE1 CZ doub Y N 444 PHE CE1 HE1 sing N N 445 PHE CE2 CZ sing Y N 446 PHE CE2 HE2 sing N N 447 PHE CZ HZ sing N N 448 PHE OXT HXT sing N N 449 PRO N CA sing N N 450 PRO N CD sing N N 451 PRO N H sing N N 452 PRO CA C sing N N 453 PRO CA CB sing N N 454 PRO CA HA sing N N 455 PRO C O doub N N 456 PRO C OXT sing N N 457 PRO CB CG sing N N 458 PRO CB HB2 sing N N 459 PRO CB HB3 sing N N 460 PRO CG CD sing N N 461 PRO CG HG2 sing N N 462 PRO CG HG3 sing N N 463 PRO CD HD2 sing N N 464 PRO CD HD3 sing N N 465 PRO OXT HXT sing N N 466 SER N CA sing N N 467 SER N H sing N N 468 SER N H2 sing N N 469 SER CA C sing N N 470 SER CA CB sing N N 471 SER CA HA sing N N 472 SER C O doub N N 473 SER C OXT sing N N 474 SER CB OG sing N N 475 SER CB HB2 sing N N 476 SER CB HB3 sing N N 477 SER OG HG sing N N 478 SER OXT HXT sing N N 479 THR N CA sing N N 480 THR N H sing N N 481 THR N H2 sing N N 482 THR CA C sing N N 483 THR CA CB sing N N 484 THR CA HA sing N N 485 THR C O doub N N 486 THR C OXT sing N N 487 THR CB OG1 sing N N 488 THR CB CG2 sing N N 489 THR CB HB sing N N 490 THR OG1 HG1 sing N N 491 THR CG2 HG21 sing N N 492 THR CG2 HG22 sing N N 493 THR CG2 HG23 sing N N 494 THR OXT HXT sing N N 495 TRP N CA sing N N 496 TRP N H sing N N 497 TRP N H2 sing N N 498 TRP CA C sing N N 499 TRP CA CB sing N N 500 TRP CA HA sing N N 501 TRP C O doub N N 502 TRP C OXT sing N N 503 TRP CB CG sing N N 504 TRP CB HB2 sing N N 505 TRP CB HB3 sing N N 506 TRP CG CD1 doub Y N 507 TRP CG CD2 sing Y N 508 TRP CD1 NE1 sing Y N 509 TRP CD1 HD1 sing N N 510 TRP CD2 CE2 doub Y N 511 TRP CD2 CE3 sing Y N 512 TRP NE1 CE2 sing Y N 513 TRP NE1 HE1 sing N N 514 TRP CE2 CZ2 sing Y N 515 TRP CE3 CZ3 doub Y N 516 TRP CE3 HE3 sing N N 517 TRP CZ2 CH2 doub Y N 518 TRP CZ2 HZ2 sing N N 519 TRP CZ3 CH2 sing Y N 520 TRP CZ3 HZ3 sing N N 521 TRP CH2 HH2 sing N N 522 TRP OXT HXT sing N N 523 TYR N CA sing N N 524 TYR N H sing N N 525 TYR N H2 sing N N 526 TYR CA C sing N N 527 TYR CA CB sing N N 528 TYR CA HA sing N N 529 TYR C O doub N N 530 TYR C OXT sing N N 531 TYR CB CG sing N N 532 TYR CB HB2 sing N N 533 TYR CB HB3 sing N N 534 TYR CG CD1 doub Y N 535 TYR CG CD2 sing Y N 536 TYR CD1 CE1 sing Y N 537 TYR CD1 HD1 sing N N 538 TYR CD2 CE2 doub Y N 539 TYR CD2 HD2 sing N N 540 TYR CE1 CZ doub Y N 541 TYR CE1 HE1 sing N N 542 TYR CE2 CZ sing Y N 543 TYR CE2 HE2 sing N N 544 TYR CZ OH sing N N 545 TYR OH HH sing N N 546 TYR OXT HXT sing N N 547 VAL N CA sing N N 548 VAL N H sing N N 549 VAL N H2 sing N N 550 VAL CA C sing N N 551 VAL CA CB sing N N 552 VAL CA HA sing N N 553 VAL C O doub N N 554 VAL C OXT sing N N 555 VAL CB CG1 sing N N 556 VAL CB CG2 sing N N 557 VAL CB HB sing N N 558 VAL CG1 HG11 sing N N 559 VAL CG1 HG12 sing N N 560 VAL CG1 HG13 sing N N 561 VAL CG2 HG21 sing N N 562 VAL CG2 HG22 sing N N 563 VAL CG2 HG23 sing N N 564 VAL OXT HXT sing N N 565 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1F4R 'b-form double helix' 1F4R 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 12 1_555 -0.379 -0.202 -1.112 -21.525 7.994 -5.097 1 D_DG1:DC25_E D 1 ? E 25 ? 19 1 1 A DA 2 1_555 B DT 11 1_555 -0.041 -0.193 -0.219 -14.608 -8.616 8.569 2 D_DA2:DT24_E D 2 ? E 24 ? 20 1 1 A DC 3 1_555 B DG 10 1_555 0.183 0.123 0.018 -2.168 -8.966 5.348 3 D_DC3:DG23_E D 3 ? E 23 ? 19 1 1 A DA 4 1_555 B DT 9 1_555 -0.109 0.074 0.235 0.769 -21.419 2.937 4 D_DA4:DT22_E D 4 ? E 22 ? 20 1 1 A DT 5 1_555 B DA 8 1_555 0.295 -0.098 -0.032 4.273 -15.868 1.260 5 D_DT5:DA21_E D 5 ? E 21 ? 20 1 1 A DG 6 1_555 B DC 7 1_555 -0.146 -0.053 0.330 12.369 3.896 2.736 6 D_DG6:DC20_E D 6 ? E 20 ? 19 1 1 A DT 8 1_555 B DA 5 1_555 -0.304 -0.072 0.228 -1.682 -15.390 2.497 7 D_DT8:DA18_E D 8 ? E 18 ? 20 1 1 A DT 9 1_555 B DA 4 1_555 -0.065 0.165 0.144 -0.035 -18.144 0.183 8 D_DT9:DA17_E D 9 ? E 17 ? 20 1 1 A DG 10 1_555 B DC 3 1_555 -0.372 -0.111 -0.172 7.472 5.953 2.579 9 D_DG10:DC16_E D 10 ? E 16 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.611 -0.330 -1.019 20.763 3.571 -11.997 10 D_DC11:DG15_E D 11 ? E 15 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 12 1_555 A DA 2 1_555 B DT 11 1_555 -0.390 0.280 3.354 -5.466 -4.019 37.355 0.960 -0.120 3.329 -6.212 8.449 37.944 1 DD_DG1DA2:DT24DC25_EE D 1 ? E 25 ? D 2 ? E 24 ? 1 A DA 2 1_555 B DT 11 1_555 A DC 3 1_555 B DG 10 1_555 -0.676 0.020 3.016 -3.374 5.934 32.264 -0.907 0.656 3.025 10.531 5.987 32.959 2 DD_DA2DC3:DG23DT24_EE D 2 ? E 24 ? D 3 ? E 23 ? 1 A DC 3 1_555 B DG 10 1_555 A DA 4 1_555 B DT 9 1_555 -0.408 0.689 3.341 -1.089 -0.668 38.207 1.138 0.482 3.339 -1.020 1.663 38.227 3 DD_DC3DA4:DT22DG23_EE D 3 ? E 23 ? D 4 ? E 22 ? 1 A DA 4 1_555 B DT 9 1_555 A DT 5 1_555 B DA 8 1_555 0.124 -0.190 3.185 3.556 5.000 32.715 -1.144 0.361 3.119 8.781 -6.244 33.270 4 DD_DA4DT5:DA21DT22_EE D 4 ? E 22 ? D 5 ? E 21 ? 1 A DT 5 1_555 B DA 8 1_555 A DG 6 1_555 B DC 7 1_555 0.551 1.975 3.423 -0.841 -5.333 42.796 3.217 -0.833 3.156 -7.273 1.147 43.119 5 DD_DT5DG6:DC20DA21_EE D 5 ? E 21 ? D 6 ? E 20 ? 1 A DT 8 1_555 B DA 5 1_555 A DT 9 1_555 B DA 4 1_555 0.371 0.157 3.288 0.818 2.238 35.104 -0.076 -0.491 3.299 3.705 -1.355 35.183 6 DD_DT8DT9:DA17DA18_EE D 8 ? E 18 ? D 9 ? E 17 ? 1 A DT 9 1_555 B DA 4 1_555 A DG 10 1_555 B DC 3 1_555 1.558 0.608 3.330 3.716 -4.285 31.697 1.887 -2.125 3.377 -7.767 -6.737 32.188 7 DD_DT9DG10:DC16DA17_EE D 9 ? E 17 ? D 10 ? E 16 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -0.795 0.155 3.273 4.249 -3.820 39.740 0.655 1.635 3.148 -5.584 -6.211 40.132 8 DD_DG10DC11:DG15DC16_EE D 10 ? E 16 ? D 11 ? E 15 ? # _atom_sites.entry_id 1F4R _atom_sites.fract_transf_matrix[1][1] 0.023753 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017452 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007968 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_