data_1F6L # _entry.id 1F6L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1F6L RCSB RCSB011306 WWPDB D_1000011306 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1F6L _pdbx_database_status.recvd_initial_deposition_date 2000-06-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nymalm, Y.' 1 'Kravchuk, Z.' 2 'Salminen, T.' 3 'Chumanevich, A.A.' 4 'Dubnovitsky, A.P.' 5 'Kankare, J.' 6 'Pentikainen, O.' 7 'Lehtonen, J.' 8 'Arosio, P.' 9 'Martsev, S.' 10 'Johnson, M.S.' 11 # _citation.id primary _citation.title 'Antiferritin VL homodimer binds human spleen ferritin with high specificity' _citation.journal_abbrev J.STRUCT.BIOL. _citation.journal_volume 138 _citation.page_first 171 _citation.page_last 186 _citation.year 2002 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12217656 _citation.pdbx_database_id_DOI '10.1016/S1047-8477(02)00015-1' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nymalm, Y.' 1 primary 'Kravchuk, Z.' 2 primary 'Salminen, T.' 3 primary 'Chumanevich, A.A.' 4 primary 'Dubnovitsky, A.P.' 5 primary 'Kankare, J.' 6 primary 'Pentikainen, O.' 7 primary 'Lehtonen, J.' 8 primary 'Arosio, P.' 9 primary 'Martsev, S.' 10 primary 'Johnson, M.S.' 11 # _cell.entry_id 1F6L _cell.length_a 52.214 _cell.length_b 52.214 _cell.length_c 157.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F6L _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ANTI-FERRITIN IMMUNOGLOBULIN LIGHT CHAIN' 12709.074 1 ? ? 'VARIABLE LIGHT CHAIN' ? 2 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP EDFGSYYCQHHYGTPFTFGSGTKLEIKRHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP EDFGSYYCQHHYGTPFTFGSGTKLEIKRHHHHHH ; _entity_poly.pdbx_strand_id L _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 GLN n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 ALA n 1 10 SER n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 GLU n 1 18 THR n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 ARG n 1 25 ALA n 1 26 SER n 1 27 GLU n 1 28 ASN n 1 29 ILE n 1 30 TYR n 1 31 SER n 1 32 TYR n 1 33 LEU n 1 34 ALA n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 LYS n 1 40 GLN n 1 41 GLY n 1 42 LYS n 1 43 SER n 1 44 PRO n 1 45 GLN n 1 46 LEU n 1 47 LEU n 1 48 VAL n 1 49 TYR n 1 50 ASN n 1 51 ALA n 1 52 LYS n 1 53 THR n 1 54 LEU n 1 55 ALA n 1 56 GLU n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 GLN n 1 71 PHE n 1 72 SER n 1 73 LEU n 1 74 LYS n 1 75 ILE n 1 76 ASN n 1 77 SER n 1 78 LEU n 1 79 GLN n 1 80 PRO n 1 81 GLU n 1 82 ASP n 1 83 PHE n 1 84 GLY n 1 85 SER n 1 86 TYR n 1 87 TYR n 1 88 CYS n 1 89 GLN n 1 90 HIS n 1 91 HIS n 1 92 TYR n 1 93 GLY n 1 94 THR n 1 95 PRO n 1 96 PHE n 1 97 THR n 1 98 PHE n 1 99 GLY n 1 100 SER n 1 101 GLY n 1 102 THR n 1 103 LYS n 1 104 LEU n 1 105 GLU n 1 106 ILE n 1 107 LYS n 1 108 ARG n 1 109 HIS n 1 110 HIS n 1 111 HIS n 1 112 HIS n 1 113 HIS n 1 114 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ SPLEEN _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETVL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code KV1H_HUMAN _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P01600 _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_seq_one_letter_code ;DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP EDFGSYYCQHHYGTPFTFGSGTKLEIKR ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1F6L _struct_ref_seq.pdbx_strand_id L _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01600 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 128 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1F6L HIS L 109 ? UNP P01600 ? ? 'EXPRESSION TAG' 109 1 1 1F6L HIS L 110 ? UNP P01600 ? ? 'EXPRESSION TAG' 110 2 1 1F6L HIS L 111 ? UNP P01600 ? ? 'EXPRESSION TAG' 111 3 1 1F6L HIS L 112 ? UNP P01600 ? ? 'EXPRESSION TAG' 112 4 1 1F6L HIS L 113 ? UNP P01600 ? ? 'EXPRESSION TAG' 113 5 1 1F6L HIS L 114 ? UNP P01600 ? ? 'EXPRESSION TAG' 114 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1F6L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.61 _exptl_crystal.density_Matthews 2.44 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'PEG 400, ammonium sulfate, hepes, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1998-10-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1F6L _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.8 _reflns.number_obs 3445 _reflns.number_all 3589 _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.099 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 90.5 _reflns_shell.Rmerge_I_obs 0.323 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 315 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1F6L _refine.ls_number_reflns_obs 3335 _refine.ls_number_reflns_all 3553 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 500 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs 93.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.257 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 328 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 816 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 824 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 500 # _struct.entry_id 1F6L _struct.title 'VARIABLE LIGHT CHAIN DIMER OF ANTI-FERRITIN ANTIBODY' _struct.pdbx_descriptor 'ANTI-FERRITIN IMMUNOGLOBULIN LIGHT CHAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1F6L _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'immunoglobulin fold, variable light chain, dimer, anti-ferritin antibody, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 79 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id PHE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 83 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLN _struct_conf.beg_auth_asym_id L _struct_conf.beg_auth_seq_id 79 _struct_conf.end_auth_comp_id PHE _struct_conf.end_auth_asym_id L _struct_conf.end_auth_seq_id 83 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 23 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 88 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id L _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 23 _struct_conn.ptnr2_auth_asym_id L _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 88 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.017 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 0.21 2 THR 94 A . ? THR 94 L PRO 95 A ? PRO 95 L 1 -0.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? SER A 7 ? MET L 4 SER L 7 A 2 VAL A 19 ? ALA A 25 ? VAL L 19 ALA L 25 A 3 GLN A 70 ? ILE A 75 ? GLN L 70 ILE L 75 A 4 PHE A 62 ? SER A 67 ? PHE L 62 SER L 67 B 1 SER A 10 ? SER A 12 ? SER L 10 SER L 12 B 2 THR A 102 ? GLU A 105 ? THR L 102 GLU L 105 B 3 GLY A 84 ? HIS A 90 ? GLY L 84 HIS L 90 B 4 LEU A 33 ? GLN A 38 ? LEU L 33 GLN L 38 B 5 GLN A 45 ? TYR A 49 ? GLN L 45 TYR L 49 B 6 THR A 53 ? LEU A 54 ? THR L 53 LEU L 54 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 7 ? O SER L 7 N THR A 22 ? N THR L 22 A 2 3 N CYS A 23 ? N CYS L 23 O PHE A 71 ? O PHE L 71 A 3 4 N LYS A 74 ? N LYS L 74 O SER A 63 ? O SER L 63 B 1 2 N LEU A 11 ? N LEU L 11 O LYS A 103 ? O LYS L 103 B 2 3 N LEU A 104 ? N LEU L 104 O GLY A 84 ? O GLY L 84 B 3 4 O GLN A 89 ? O GLN L 89 N ALA A 34 ? N ALA L 34 B 4 5 O GLN A 37 ? O GLN L 37 N GLN A 45 ? N GLN L 45 B 5 6 O TYR A 49 ? O TYR L 49 N THR A 53 ? N THR L 53 # _database_PDB_matrix.entry_id 1F6L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1F6L _atom_sites.fract_transf_matrix[1][1] 0.019152 _atom_sites.fract_transf_matrix[1][2] 0.011057 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022115 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006339 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 GLN 3 3 3 GLN GLN L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 ALA 9 9 9 ALA ALA L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 ALA 13 13 13 ALA ALA L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 VAL 15 15 15 VAL VAL L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 GLU 17 17 17 GLU GLU L . n A 1 18 THR 18 18 18 THR THR L . n A 1 19 VAL 19 19 19 VAL VAL L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 ALA 25 25 25 ALA ALA L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLU 27 27 27 GLU GLU L . n A 1 28 ASN 28 28 28 ASN ASN L . n A 1 29 ILE 29 29 29 ILE ILE L . n A 1 30 TYR 30 30 30 TYR TYR L . n A 1 31 SER 31 31 31 SER SER L . n A 1 32 TYR 32 32 32 TYR TYR L . n A 1 33 LEU 33 33 33 LEU LEU L . n A 1 34 ALA 34 34 34 ALA ALA L . n A 1 35 TRP 35 35 35 TRP TRP L . n A 1 36 TYR 36 36 36 TYR TYR L . n A 1 37 GLN 37 37 37 GLN GLN L . n A 1 38 GLN 38 38 38 GLN GLN L . n A 1 39 LYS 39 39 39 LYS LYS L . n A 1 40 GLN 40 40 40 GLN GLN L . n A 1 41 GLY 41 41 41 GLY GLY L . n A 1 42 LYS 42 42 42 LYS LYS L . n A 1 43 SER 43 43 43 SER SER L . n A 1 44 PRO 44 44 44 PRO PRO L . n A 1 45 GLN 45 45 45 GLN GLN L . n A 1 46 LEU 46 46 46 LEU LEU L . n A 1 47 LEU 47 47 47 LEU LEU L . n A 1 48 VAL 48 48 48 VAL VAL L . n A 1 49 TYR 49 49 49 TYR TYR L . n A 1 50 ASN 50 50 50 ASN ASN L . n A 1 51 ALA 51 51 51 ALA ALA L . n A 1 52 LYS 52 52 52 LYS LYS L . n A 1 53 THR 53 53 53 THR THR L . n A 1 54 LEU 54 54 54 LEU LEU L . n A 1 55 ALA 55 55 55 ALA ALA L . n A 1 56 GLU 56 56 56 GLU GLU L . n A 1 57 GLY 57 57 57 GLY GLY L . n A 1 58 VAL 58 58 58 VAL VAL L . n A 1 59 PRO 59 59 59 PRO PRO L . n A 1 60 SER 60 60 60 SER SER L . n A 1 61 ARG 61 61 61 ARG ARG L . n A 1 62 PHE 62 62 62 PHE PHE L . n A 1 63 SER 63 63 63 SER SER L . n A 1 64 GLY 64 64 64 GLY GLY L . n A 1 65 SER 65 65 65 SER SER L . n A 1 66 GLY 66 66 66 GLY GLY L . n A 1 67 SER 67 67 67 SER SER L . n A 1 68 GLY 68 68 68 GLY GLY L . n A 1 69 THR 69 69 69 THR THR L . n A 1 70 GLN 70 70 70 GLN GLN L . n A 1 71 PHE 71 71 71 PHE PHE L . n A 1 72 SER 72 72 72 SER SER L . n A 1 73 LEU 73 73 73 LEU LEU L . n A 1 74 LYS 74 74 74 LYS LYS L . n A 1 75 ILE 75 75 75 ILE ILE L . n A 1 76 ASN 76 76 76 ASN ASN L . n A 1 77 SER 77 77 77 SER SER L . n A 1 78 LEU 78 78 78 LEU LEU L . n A 1 79 GLN 79 79 79 GLN GLN L . n A 1 80 PRO 80 80 80 PRO PRO L . n A 1 81 GLU 81 81 81 GLU GLU L . n A 1 82 ASP 82 82 82 ASP ASP L . n A 1 83 PHE 83 83 83 PHE PHE L . n A 1 84 GLY 84 84 84 GLY GLY L . n A 1 85 SER 85 85 85 SER SER L . n A 1 86 TYR 86 86 86 TYR TYR L . n A 1 87 TYR 87 87 87 TYR TYR L . n A 1 88 CYS 88 88 88 CYS CYS L . n A 1 89 GLN 89 89 89 GLN GLN L . n A 1 90 HIS 90 90 90 HIS HIS L . n A 1 91 HIS 91 91 91 HIS HIS L . n A 1 92 TYR 92 92 92 TYR TYR L . n A 1 93 GLY 93 93 93 GLY GLY L . n A 1 94 THR 94 94 94 THR THR L . n A 1 95 PRO 95 95 95 PRO PRO L . n A 1 96 PHE 96 96 96 PHE PHE L . n A 1 97 THR 97 97 97 THR THR L . n A 1 98 PHE 98 98 98 PHE PHE L . n A 1 99 GLY 99 99 99 GLY GLY L . n A 1 100 SER 100 100 100 SER SER L . n A 1 101 GLY 101 101 101 GLY GLY L . n A 1 102 THR 102 102 102 THR THR L . n A 1 103 LYS 103 103 103 LYS LYS L . n A 1 104 LEU 104 104 104 LEU LEU L . n A 1 105 GLU 105 105 105 GLU GLU L . n A 1 106 ILE 106 106 106 ILE ILE L . n A 1 107 LYS 107 107 ? ? ? L . n A 1 108 ARG 108 108 ? ? ? L . n A 1 109 HIS 109 109 ? ? ? L . n A 1 110 HIS 110 110 ? ? ? L . n A 1 111 HIS 111 111 ? ? ? L . n A 1 112 HIS 112 112 ? ? ? L . n A 1 113 HIS 113 113 ? ? ? L . n A 1 114 HIS 114 114 ? ? ? L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 115 101 HOH HOH L . B 2 HOH 2 116 102 HOH HOH L . B 2 HOH 3 117 103 HOH HOH L . B 2 HOH 4 118 104 HOH HOH L . B 2 HOH 5 119 105 HOH HOH L . B 2 HOH 6 120 106 HOH HOH L . B 2 HOH 7 121 107 HOH HOH L . B 2 HOH 8 122 108 HOH HOH L . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 78.3210000000 -0.8660254038 0.5000000000 0.0000000000 45.2186504332 0.0000000000 0.0000000000 -1.0000000000 105.1666666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-10-23 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category diffrn_source # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_source.type' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR L 30 ? ? 59.76 -104.53 2 1 GLN L 40 ? ? 52.27 -127.00 3 1 ALA L 51 ? ? 70.01 -45.83 4 1 LYS L 52 ? ? -140.34 18.74 5 1 PRO L 59 ? ? -42.68 151.60 6 1 SER L 77 ? ? 40.87 77.89 7 1 TYR L 92 ? ? -101.64 -98.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L LYS 107 ? A LYS 107 2 1 Y 1 L ARG 108 ? A ARG 108 3 1 Y 1 L HIS 109 ? A HIS 109 4 1 Y 1 L HIS 110 ? A HIS 110 5 1 Y 1 L HIS 111 ? A HIS 111 6 1 Y 1 L HIS 112 ? A HIS 112 7 1 Y 1 L HIS 113 ? A HIS 113 8 1 Y 1 L HIS 114 ? A HIS 114 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #