HEADER TRANSCRIPTION 10-JUL-00 1F9F TITLE CRYSTAL STRUCTURE OF THE HPV-18 E2 DNA-BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN E2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 287-365 OF HPV-18 E2 WITH GSHM; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PAPILLOMAVIRUS TYPE 18; SOURCE 3 ORGANISM_TAXID: 333761; SOURCE 4 GENE: E2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3 KEYWDS DIMERIC BETA BARREL, ACTIVATOR, DNA-BINDING, TRANS-ACTING FACTOR, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.S.KIM,J.TAM,A.F.WANG,R.HEGDE REVDAT 6 07-FEB-24 1F9F 1 REMARK REVDAT 5 13-JUN-18 1F9F 1 COMPND SOURCE REMARK DBREF REVDAT 5 2 1 SEQADV REVDAT 4 24-FEB-09 1F9F 1 VERSN REVDAT 3 01-APR-03 1F9F 1 JRNL REVDAT 2 06-DEC-00 1F9F 1 ATOM REVDAT 1 15-NOV-00 1F9F 0 JRNL AUTH S.S.KIM,J.K.TAM,A.F.WANG,R.S.HEGDE JRNL TITL THE STRUCTURAL BASIS OF DNA TARGET DISCRIMINATION BY JRNL TITL 2 PAPILLOMAVIRUS E2 PROTEINS. JRNL REF J.BIOL.CHEM. V. 275 31245 2000 JRNL REFN ISSN 0021-9258 JRNL PMID 10906136 JRNL DOI 10.1074/JBC.M004541200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.100 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 546997.800 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 24144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2367 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3100 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 318 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2451 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.74000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : -3.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.028 REMARK 3 BOND ANGLES (DEGREES) : 2.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.420 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.390 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.290 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.600 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.700 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 68.54 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1F9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1000011406. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-99 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.53000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.53000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.75000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 283 REMARK 465 SER A 284 REMARK 465 THR A 323 REMARK 465 GLY A 324 REMARK 465 ALA A 325 REMARK 465 GLY A 326 REMARK 465 ASN A 327 REMARK 465 GLY B 283 REMARK 465 GLY B 324 REMARK 465 ALA B 325 REMARK 465 GLY B 326 REMARK 465 ASN B 327 REMARK 465 GLU B 328 REMARK 465 GLY C 283 REMARK 465 GLY C 324 REMARK 465 ALA C 325 REMARK 465 GLY C 326 REMARK 465 ASN C 327 REMARK 465 GLU C 328 REMARK 465 LYS C 329 REMARK 465 GLY D 283 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 304 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 305 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS A 308 CG CD CE NZ REMARK 470 GLU A 328 CB CG CD OE1 OE2 REMARK 470 LYS A 329 CB CG CD CE NZ REMARK 470 VAL A 350 CG1 CG2 REMARK 470 SER B 284 OG REMARK 470 HIS B 285 CG ND1 CD2 CE1 NE2 REMARK 470 MET B 286 CG SD CE REMARK 470 LYS B 293 CG CD CE NZ REMARK 470 ARG B 307 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 308 CG CD CE NZ REMARK 470 HIS B 309 CB CG ND1 CD2 CE1 NE2 REMARK 470 SER B 310 OG REMARK 470 ASP B 311 CB CG OD1 OD2 REMARK 470 HIS B 312 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 323 CB OG1 CG2 REMARK 470 LYS B 329 CB CG CD CE NZ REMARK 470 TYR C 304 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 305 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 308 CB CG CD CE NZ REMARK 470 HIS C 309 CG ND1 CD2 CE1 NE2 REMARK 470 SER C 310 CB OG REMARK 470 ASP C 311 CG OD1 OD2 REMARK 470 HIS C 312 CG ND1 CD2 CE1 NE2 REMARK 470 LYS D 308 CG CD CE NZ REMARK 470 HIS D 309 CG ND1 CD2 CE1 NE2 REMARK 470 ASP D 311 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 340 OH TYR D 362 1.91 REMARK 500 OD1 ASP A 315 O HOH A 80 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 337 CE1 TYR A 337 CZ 0.079 REMARK 500 VAL B 335 CB VAL B 335 CG1 0.132 REMARK 500 TYR D 337 CZ TYR D 337 OH 0.105 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 296 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP C 311 CA - C - N ANGL. DEV. = -15.6 DEGREES REMARK 500 ARG C 314 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 LEU C 333 CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 ARG D 314 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP D 315 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP D 315 CB - CG - OD2 ANGL. DEV. = -8.9 DEGREES REMARK 500 LEU D 333 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 349 -10.70 -143.98 REMARK 500 LYS B 308 78.04 -107.35 REMARK 500 HIS B 309 23.29 144.85 REMARK 500 SER C 310 141.63 16.98 REMARK 500 ASP C 311 -138.58 -122.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 362 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 3 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH D 63 DISTANCE = 6.56 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 902 DBREF 1F9F A 287 365 UNP P06790 VE2_HPV18 287 365 DBREF 1F9F B 287 365 UNP P06790 VE2_HPV18 287 365 DBREF 1F9F C 287 365 UNP P06790 VE2_HPV18 287 365 DBREF 1F9F D 287 365 UNP P06790 VE2_HPV18 287 365 SEQADV 1F9F GLY A 283 UNP P06790 EXPRESSION TAG SEQADV 1F9F SER A 284 UNP P06790 EXPRESSION TAG SEQADV 1F9F HIS A 285 UNP P06790 EXPRESSION TAG SEQADV 1F9F MET A 286 UNP P06790 EXPRESSION TAG SEQADV 1F9F GLY B 283 UNP P06790 EXPRESSION TAG SEQADV 1F9F SER B 284 UNP P06790 EXPRESSION TAG SEQADV 1F9F HIS B 285 UNP P06790 EXPRESSION TAG SEQADV 1F9F MET B 286 UNP P06790 EXPRESSION TAG SEQADV 1F9F GLY C 283 UNP P06790 EXPRESSION TAG SEQADV 1F9F SER C 284 UNP P06790 EXPRESSION TAG SEQADV 1F9F HIS C 285 UNP P06790 EXPRESSION TAG SEQADV 1F9F MET C 286 UNP P06790 EXPRESSION TAG SEQADV 1F9F GLY D 283 UNP P06790 EXPRESSION TAG SEQADV 1F9F SER D 284 UNP P06790 EXPRESSION TAG SEQADV 1F9F HIS D 285 UNP P06790 EXPRESSION TAG SEQADV 1F9F MET D 286 UNP P06790 EXPRESSION TAG SEQRES 1 A 83 GLY SER HIS MET THR PRO ILE ILE HIS LEU LYS GLY ASP SEQRES 2 A 83 ARG ASN SER LEU LYS CYS LEU ARG TYR ARG LEU ARG LYS SEQRES 3 A 83 HIS SER ASP HIS TYR ARG ASP ILE SER SER THR TRP HIS SEQRES 4 A 83 TRP THR GLY ALA GLY ASN GLU LYS THR GLY ILE LEU THR SEQRES 5 A 83 VAL THR TYR HIS SER GLU THR GLN ARG THR LYS PHE LEU SEQRES 6 A 83 ASN THR VAL ALA ILE PRO ASP SER VAL GLN ILE LEU VAL SEQRES 7 A 83 GLY TYR MET THR MET SEQRES 1 B 83 GLY SER HIS MET THR PRO ILE ILE HIS LEU LYS GLY ASP SEQRES 2 B 83 ARG ASN SER LEU LYS CYS LEU ARG TYR ARG LEU ARG LYS SEQRES 3 B 83 HIS SER ASP HIS TYR ARG ASP ILE SER SER THR TRP HIS SEQRES 4 B 83 TRP THR GLY ALA GLY ASN GLU LYS THR GLY ILE LEU THR SEQRES 5 B 83 VAL THR TYR HIS SER GLU THR GLN ARG THR LYS PHE LEU SEQRES 6 B 83 ASN THR VAL ALA ILE PRO ASP SER VAL GLN ILE LEU VAL SEQRES 7 B 83 GLY TYR MET THR MET SEQRES 1 C 83 GLY SER HIS MET THR PRO ILE ILE HIS LEU LYS GLY ASP SEQRES 2 C 83 ARG ASN SER LEU LYS CYS LEU ARG TYR ARG LEU ARG LYS SEQRES 3 C 83 HIS SER ASP HIS TYR ARG ASP ILE SER SER THR TRP HIS SEQRES 4 C 83 TRP THR GLY ALA GLY ASN GLU LYS THR GLY ILE LEU THR SEQRES 5 C 83 VAL THR TYR HIS SER GLU THR GLN ARG THR LYS PHE LEU SEQRES 6 C 83 ASN THR VAL ALA ILE PRO ASP SER VAL GLN ILE LEU VAL SEQRES 7 C 83 GLY TYR MET THR MET SEQRES 1 D 83 GLY SER HIS MET THR PRO ILE ILE HIS LEU LYS GLY ASP SEQRES 2 D 83 ARG ASN SER LEU LYS CYS LEU ARG TYR ARG LEU ARG LYS SEQRES 3 D 83 HIS SER ASP HIS TYR ARG ASP ILE SER SER THR TRP HIS SEQRES 4 D 83 TRP THR GLY ALA GLY ASN GLU LYS THR GLY ILE LEU THR SEQRES 5 D 83 VAL THR TYR HIS SER GLU THR GLN ARG THR LYS PHE LEU SEQRES 6 D 83 ASN THR VAL ALA ILE PRO ASP SER VAL GLN ILE LEU VAL SEQRES 7 D 83 GLY TYR MET THR MET HET SO4 C 902 5 HET SO4 D 901 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *99(H2 O) HELIX 1 1 ARG A 296 SER A 310 1 15 HELIX 2 2 SER A 339 VAL A 350 1 12 HELIX 3 3 ARG B 296 ARG B 307 1 12 HELIX 4 4 HIS B 309 TYR B 313 5 5 HELIX 5 5 SER B 339 VAL B 350 1 12 HELIX 6 6 ASP C 295 SER C 310 1 16 HELIX 7 7 SER C 339 VAL C 350 1 12 HELIX 8 8 ASP D 295 SER D 310 1 16 HELIX 9 9 SER D 339 VAL D 350 1 12 SHEET 1 A 4 ASP A 315 ILE A 316 0 SHEET 2 A 4 THR A 330 THR A 336 -1 N THR A 336 O ASP A 315 SHEET 3 A 4 MET A 286 ASP A 295 -1 O ILE A 290 N VAL A 335 SHEET 4 A 4 GLN A 357 THR A 364 -1 N GLN A 357 O LYS A 293 SHEET 1 B 4 ASP B 315 ILE B 316 0 SHEET 2 B 4 THR B 330 THR B 336 -1 N THR B 336 O ASP B 315 SHEET 3 B 4 MET B 286 ASP B 295 -1 O ILE B 290 N VAL B 335 SHEET 4 B 4 GLN B 357 THR B 364 -1 N GLN B 357 O LYS B 293 SHEET 1 C 4 ASP C 315 ILE C 316 0 SHEET 2 C 4 GLY C 331 THR C 336 -1 N THR C 336 O ASP C 315 SHEET 3 C 4 MET C 286 GLY C 294 -1 O ILE C 290 N VAL C 335 SHEET 4 C 4 GLN C 357 THR C 364 -1 N GLN C 357 O LYS C 293 SHEET 1 D 4 ASP D 315 ILE D 316 0 SHEET 2 D 4 GLY D 331 THR D 336 -1 N THR D 336 O ASP D 315 SHEET 3 D 4 HIS D 285 GLY D 294 -1 O ILE D 290 N VAL D 335 SHEET 4 D 4 GLN D 357 MET D 365 -1 N GLN D 357 O LYS D 293 SITE 1 AC1 6 HOH D 17 HOH D 74 LYS D 300 ARG D 303 SITE 2 AC1 6 SER D 318 THR D 319 SITE 1 AC2 4 LYS C 300 ARG C 303 SER C 318 THR C 319 CRYST1 41.500 46.800 161.060 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006209 0.00000