HEADER TRANSFERASE 12-JUL-00 1FA9 TITLE HUMAN LIVER GLYCOGEN PHOSPHORYLASE A COMPLEXED WITH AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN PHOSPHORYLASE, LIVER FORM; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: LIVER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PKK2332 KEYWDS PROTEIN-LIGAND COMPLEX, ALLOSTERIC PROTEIN, PHOSPHORYLATED PROTEIN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.L.RATH,M.AMMIRATI,P.K.LEMOTTE,K.F.FENNELL,M.N.MANSOUR,D.E.DANLEY, AUTHOR 2 T.R.HYNES,G.K.SCHULTE,D.J.WASILKO,J.PANDIT REVDAT 7 09-AUG-23 1FA9 1 HETSYN REVDAT 6 29-JUL-20 1FA9 1 COMPND REMARK SEQADV HETNAM REVDAT 6 2 1 LINK SITE REVDAT 5 31-JAN-18 1FA9 1 REMARK REVDAT 4 13-JUL-11 1FA9 1 VERSN REVDAT 3 24-FEB-09 1FA9 1 VERSN REVDAT 2 01-APR-03 1FA9 1 JRNL REVDAT 1 25-AUG-00 1FA9 0 JRNL AUTH V.L.RATH,M.AMMIRATI,P.K.LEMOTTE,K.F.FENNELL,M.N.MANSOUR, JRNL AUTH 2 D.E.DANLEY,T.R.HYNES,G.K.SCHULTE,D.J.WASILKO,J.PANDIT JRNL TITL ACTIVATION OF HUMAN LIVER GLYCOGEN PHOSPHORYLASE BY JRNL TITL 2 ALTERATION OF THE SECONDARY STRUCTURE AND PACKING OF THE JRNL TITL 3 CATALYTIC CORE. JRNL REF MOL.CELL V. 6 139 2000 JRNL REFN ISSN 1097-2765 JRNL PMID 10949035 JRNL DOI 10.1016/S1097-2765(00)00015-0 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 43732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : X-PLOR REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4101 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE : 0.4760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6750 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FA9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1000011436. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-94 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43732 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: 1GPA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, TRIS/HCL, AMP, GLUCOSE, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 25K, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.56000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.12000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.12000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.56000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER CONSTRUCTED FROM CHAIN A REMARK 300 A SYMMETRY PARTNER GENERATED BY THE TWO-FOLD. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 127.68000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 LYS A 2 REMARK 465 PRO A 3 REMARK 465 LEU A 4 REMARK 465 GLU A 839 REMARK 465 SER A 840 REMARK 465 ASN A 841 REMARK 465 LYS A 842 REMARK 465 VAL A 843 REMARK 465 ASN A 844 REMARK 465 GLY A 845 REMARK 465 ASN A 846 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 5 OG1 CG2 REMARK 470 SER A 837 OG REMARK 470 ASN A 838 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 318 N THR A 319 1.41 REMARK 500 O SER A 318 OG1 THR A 319 1.56 REMARK 500 CA GLY A 321 N ALA A 322 1.63 REMARK 500 N GLY A 321 N ALA A 322 1.75 REMARK 500 NH1 ARG A 320 CA GLY A 323 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG2 THR A 319 CD2 LEU A 543 5665 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 319 C ARG A 320 N -0.173 REMARK 500 ARG A 320 C GLY A 321 N -0.145 REMARK 500 GLY A 321 N GLY A 321 CA -0.101 REMARK 500 GLY A 321 C ALA A 322 N -0.586 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 319 CA - C - N ANGL. DEV. = -16.6 DEGREES REMARK 500 THR A 319 O - C - N ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG A 320 CA - C - N ANGL. DEV. = -19.0 DEGREES REMARK 500 ARG A 320 O - C - N ANGL. DEV. = 18.4 DEGREES REMARK 500 GLY A 321 C - N - CA ANGL. DEV. = 12.7 DEGREES REMARK 500 GLY A 321 N - CA - C ANGL. DEV. = -25.8 DEGREES REMARK 500 GLY A 321 CA - C - N ANGL. DEV. = -30.2 DEGREES REMARK 500 GLY A 321 O - C - N ANGL. DEV. = 24.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 6 -103.71 -153.05 REMARK 500 GLN A 7 179.79 77.69 REMARK 500 ILE A 18 23.61 -76.78 REMARK 500 LEU A 95 -72.15 -50.19 REMARK 500 PHE A 166 159.44 159.59 REMARK 500 TYR A 203 -140.74 57.27 REMARK 500 MET A 234 28.41 45.97 REMARK 500 ASN A 282 108.90 -49.16 REMARK 500 ASN A 284 6.34 -64.99 REMARK 500 ASP A 339 -166.49 74.50 REMARK 500 LEU A 417 -18.38 -159.34 REMARK 500 SER A 436 114.59 139.70 REMARK 500 LYS A 466 -79.07 -75.54 REMARK 500 ASP A 477 -9.75 -59.62 REMARK 500 LEU A 492 -69.46 -142.21 REMARK 500 PHE A 563 77.78 79.23 REMARK 500 LYS A 568 172.46 178.67 REMARK 500 ARG A 575 -101.76 74.71 REMARK 500 GLN A 576 -15.42 55.71 REMARK 500 ASP A 593 133.95 168.58 REMARK 500 PRO A 594 -157.78 -65.03 REMARK 500 LYS A 595 -37.23 68.62 REMARK 500 SER A 638 39.14 -68.54 REMARK 500 GLN A 665 55.08 -118.86 REMARK 500 ILE A 666 37.99 -91.86 REMARK 500 SER A 674 -159.31 -133.78 REMARK 500 ASP A 722 34.98 -82.65 REMARK 500 LYS A 723 -18.33 -142.69 REMARK 500 LYS A 724 -61.30 -106.27 REMARK 500 PRO A 736 -70.77 -64.21 REMARK 500 PHE A 766 -93.21 -78.34 REMARK 500 HIS A 768 22.14 -141.57 REMARK 500 ASP A 769 -175.08 -64.92 REMARK 500 ARG A 770 -21.33 -163.78 REMARK 500 LYS A 772 72.38 49.44 REMARK 500 ILE A 824 -52.03 -122.36 REMARK 500 SER A 837 73.60 -110.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 320 10.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FC0 RELATED DB: PDB REMARK 900 1FC0 CONTAINS THE SAME PROTEIN COMPLEXED WITH N-ACETYL-BETA-D- REMARK 900 GLUCOPYRANOSYLAMINE DBREF 1FA9 A 1 846 UNP P06737 PHS1_HUMAN 2 847 SEQADV 1FA9 SEP A 14 UNP P06737 SER 15 MODIFIED RESIDUE SEQRES 1 A 846 ALA LYS PRO LEU THR ASP GLN GLU LYS ARG ARG GLN ILE SEQRES 2 A 846 SEP ILE ARG GLY ILE VAL GLY VAL GLU ASN VAL ALA GLU SEQRES 3 A 846 LEU LYS LYS SER PHE ASN ARG HIS LEU HIS PHE THR LEU SEQRES 4 A 846 VAL LYS ASP ARG ASN VAL ALA THR THR ARG ASP TYR TYR SEQRES 5 A 846 PHE ALA LEU ALA HIS THR VAL ARG ASP HIS LEU VAL GLY SEQRES 6 A 846 ARG TRP ILE ARG THR GLN GLN HIS TYR TYR ASP LYS CYS SEQRES 7 A 846 PRO LYS ARG VAL TYR TYR LEU SER LEU GLU PHE TYR MET SEQRES 8 A 846 GLY ARG THR LEU GLN ASN THR MET ILE ASN LEU GLY LEU SEQRES 9 A 846 GLN ASN ALA CYS ASP GLU ALA ILE TYR GLN LEU GLY LEU SEQRES 10 A 846 ASP ILE GLU GLU LEU GLU GLU ILE GLU GLU ASP ALA GLY SEQRES 11 A 846 LEU GLY ASN GLY GLY LEU GLY ARG LEU ALA ALA CYS PHE SEQRES 12 A 846 LEU ASP SER MET ALA THR LEU GLY LEU ALA ALA TYR GLY SEQRES 13 A 846 TYR GLY ILE ARG TYR GLU TYR GLY ILE PHE ASN GLN LYS SEQRES 14 A 846 ILE ARG ASP GLY TRP GLN VAL GLU GLU ALA ASP ASP TRP SEQRES 15 A 846 LEU ARG TYR GLY ASN PRO TRP GLU LYS SER ARG PRO GLU SEQRES 16 A 846 PHE MET LEU PRO VAL HIS PHE TYR GLY LYS VAL GLU HIS SEQRES 17 A 846 THR ASN THR GLY THR LYS TRP ILE ASP THR GLN VAL VAL SEQRES 18 A 846 LEU ALA LEU PRO TYR ASP THR PRO VAL PRO GLY TYR MET SEQRES 19 A 846 ASN ASN THR VAL ASN THR MET ARG LEU TRP SER ALA ARG SEQRES 20 A 846 ALA PRO ASN ASP PHE ASN LEU ARG ASP PHE ASN VAL GLY SEQRES 21 A 846 ASP TYR ILE GLN ALA VAL LEU ASP ARG ASN LEU ALA GLU SEQRES 22 A 846 ASN ILE SER ARG VAL LEU TYR PRO ASN ASP ASN PHE PHE SEQRES 23 A 846 GLU GLY LYS GLU LEU ARG LEU LYS GLN GLU TYR PHE VAL SEQRES 24 A 846 VAL ALA ALA THR LEU GLN ASP ILE ILE ARG ARG PHE LYS SEQRES 25 A 846 ALA SER LYS PHE GLY SER THR ARG GLY ALA GLY THR VAL SEQRES 26 A 846 PHE ASP ALA PHE PRO ASP GLN VAL ALA ILE GLN LEU ASN SEQRES 27 A 846 ASP THR HIS PRO ALA LEU ALA ILE PRO GLU LEU MET ARG SEQRES 28 A 846 ILE PHE VAL ASP ILE GLU LYS LEU PRO TRP SER LYS ALA SEQRES 29 A 846 TRP GLU LEU THR GLN LYS THR PHE ALA TYR THR ASN HIS SEQRES 30 A 846 THR VAL LEU PRO GLU ALA LEU GLU ARG TRP PRO VAL ASP SEQRES 31 A 846 LEU VAL GLU LYS LEU LEU PRO ARG HIS LEU GLU ILE ILE SEQRES 32 A 846 TYR GLU ILE ASN GLN LYS HIS LEU ASP ARG ILE VAL ALA SEQRES 33 A 846 LEU PHE PRO LYS ASP VAL ASP ARG LEU ARG ARG MET SER SEQRES 34 A 846 LEU ILE GLU GLU GLU GLY SER LYS ARG ILE ASN MET ALA SEQRES 35 A 846 HIS LEU CYS ILE VAL GLY SER HIS ALA VAL ASN GLY VAL SEQRES 36 A 846 ALA LYS ILE HIS SER ASP ILE VAL LYS THR LYS VAL PHE SEQRES 37 A 846 LYS ASP PHE SER GLU LEU GLU PRO ASP LYS PHE GLN ASN SEQRES 38 A 846 LYS THR ASN GLY ILE THR PRO ARG ARG TRP LEU LEU LEU SEQRES 39 A 846 CYS ASN PRO GLY LEU ALA GLU LEU ILE ALA GLU LYS ILE SEQRES 40 A 846 GLY GLU ASP TYR VAL LYS ASP LEU SER GLN LEU THR LYS SEQRES 41 A 846 LEU HIS SER PHE LEU GLY ASP ASP VAL PHE LEU ARG GLU SEQRES 42 A 846 LEU ALA LYS VAL LYS GLN GLU ASN LYS LEU LYS PHE SER SEQRES 43 A 846 GLN PHE LEU GLU THR GLU TYR LYS VAL LYS ILE ASN PRO SEQRES 44 A 846 SER SER MET PHE ASP VAL GLN VAL LYS ARG ILE HIS GLU SEQRES 45 A 846 TYR LYS ARG GLN LEU LEU ASN CYS LEU HIS VAL ILE THR SEQRES 46 A 846 MET TYR ASN ARG ILE LYS LYS ASP PRO LYS LYS LEU PHE SEQRES 47 A 846 VAL PRO ARG THR VAL ILE ILE GLY GLY LYS ALA ALA PRO SEQRES 48 A 846 GLY TYR HIS MET ALA LYS MET ILE ILE LYS LEU ILE THR SEQRES 49 A 846 SER VAL ALA ASP VAL VAL ASN ASN ASP PRO MET VAL GLY SEQRES 50 A 846 SER LYS LEU LYS VAL ILE PHE LEU GLU ASN TYR ARG VAL SEQRES 51 A 846 SER LEU ALA GLU LYS VAL ILE PRO ALA THR ASP LEU SER SEQRES 52 A 846 GLU GLN ILE SER THR ALA GLY THR GLU ALA SER GLY THR SEQRES 53 A 846 GLY ASN MET LYS PHE MET LEU ASN GLY ALA LEU THR ILE SEQRES 54 A 846 GLY THR MET ASP GLY ALA ASN VAL GLU MET ALA GLU GLU SEQRES 55 A 846 ALA GLY GLU GLU ASN LEU PHE ILE PHE GLY MET ARG ILE SEQRES 56 A 846 ASP ASP VAL ALA ALA LEU ASP LYS LYS GLY TYR GLU ALA SEQRES 57 A 846 LYS GLU TYR TYR GLU ALA LEU PRO GLU LEU LYS LEU VAL SEQRES 58 A 846 ILE ASP GLN ILE ASP ASN GLY PHE PHE SER PRO LYS GLN SEQRES 59 A 846 PRO ASP LEU PHE LYS ASP ILE ILE ASN MET LEU PHE TYR SEQRES 60 A 846 HIS ASP ARG PHE LYS VAL PHE ALA ASP TYR GLU ALA TYR SEQRES 61 A 846 VAL LYS CYS GLN ASP LYS VAL SER GLN LEU TYR MET ASN SEQRES 62 A 846 PRO LYS ALA TRP ASN THR MET VAL LEU LYS ASN ILE ALA SEQRES 63 A 846 ALA SER GLY LYS PHE SER SER ASP ARG THR ILE LYS GLU SEQRES 64 A 846 TYR ALA GLN ASN ILE TRP ASN VAL GLU PRO SER ASP LEU SEQRES 65 A 846 LYS ILE SER LEU SER ASN GLU SER ASN LYS VAL ASN GLY SEQRES 66 A 846 ASN MODRES 1FA9 SEP A 14 SER PHOSPHOSERINE HET SEP A 14 10 HET GLC A 998 12 HET AMP A 997 23 HET PLP A 999 15 HETNAM SEP PHOSPHOSERINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN SEP PHOSPHONOSERINE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 GLC C6 H12 O6 FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 4 PLP C8 H10 N O6 P FORMUL 5 HOH *242(H2 O) HELIX 1 1 LYS A 9 ILE A 13 5 5 HELIX 2 2 ASN A 23 PHE A 37 1 15 HELIX 3 3 THR A 47 CYS A 78 1 32 HELIX 4 4 THR A 94 LEU A 102 1 9 HELIX 5 5 LEU A 104 LEU A 115 1 12 HELIX 6 6 ASP A 118 GLU A 124 1 7 HELIX 7 7 GLY A 134 LEU A 150 1 17 HELIX 8 8 ASN A 253 GLY A 260 1 8 HELIX 9 9 ILE A 263 ALA A 265 5 3 HELIX 10 10 VAL A 266 ILE A 275 1 10 HELIX 11 11 PHE A 285 SER A 314 1 30 HELIX 12 12 ALA A 328 GLN A 332 1 5 HELIX 13 13 LEU A 344 ILE A 356 1 13 HELIX 14 14 PRO A 360 THR A 371 1 12 HELIX 15 15 LEU A 380 LEU A 384 5 5 HELIX 16 16 VAL A 389 LEU A 396 1 8 HELIX 17 17 LEU A 396 VAL A 415 1 20 HELIX 18 18 ASP A 421 SER A 429 1 9 HELIX 19 19 MET A 441 SER A 449 1 9 HELIX 20 20 ALA A 456 LYS A 466 1 11 HELIX 21 21 PHE A 468 GLU A 473 1 6 HELIX 22 22 GLU A 475 ASP A 477 5 3 HELIX 23 23 ASN A 496 GLY A 508 1 13 HELIX 24 24 ASP A 514 LEU A 525 5 12 HELIX 25 25 ASP A 527 LYS A 554 1 28 HELIX 26 26 GLN A 576 ASP A 593 1 18 HELIX 27 27 TYR A 613 ASP A 633 1 21 HELIX 28 28 ARG A 649 ILE A 657 1 9 HELIX 29 29 PRO A 658 THR A 660 5 3 HELIX 30 30 GLY A 675 GLY A 685 1 11 HELIX 31 31 GLY A 694 GLY A 704 1 11 HELIX 32 32 GLU A 705 LEU A 708 5 4 HELIX 33 33 ARG A 714 ASP A 722 1 9 HELIX 34 34 ALA A 728 LEU A 735 1 8 HELIX 35 35 LEU A 735 GLY A 748 1 14 HELIX 36 36 GLN A 754 LEU A 757 5 4 HELIX 37 37 PHE A 758 PHE A 766 1 9 HELIX 38 38 LYS A 772 MET A 792 1 21 HELIX 39 39 ASN A 793 ALA A 806 1 14 HELIX 40 40 ALA A 807 PHE A 811 5 5 HELIX 41 41 SER A 812 ILE A 824 1 13 SHEET 1 A 9 PHE A 479 ASN A 481 0 SHEET 2 A 9 ALA A 451 GLY A 454 1 O VAL A 452 N GLN A 480 SHEET 3 A 9 PHE A 372 THR A 375 1 O PHE A 372 N ALA A 451 SHEET 4 A 9 VAL A 333 ASN A 338 1 O ILE A 335 N ALA A 373 SHEET 5 A 9 ARG A 81 LEU A 85 1 O ARG A 81 N ALA A 334 SHEET 6 A 9 ALA A 154 ILE A 159 1 O TYR A 155 N TYR A 84 SHEET 7 A 9 VAL A 238 ARG A 247 1 O THR A 240 N GLY A 156 SHEET 8 A 9 GLN A 219 PRO A 231 -1 N LEU A 222 O ARG A 247 SHEET 9 A 9 LYS A 191 SER A 192 -1 O LYS A 191 N ASP A 227 SHEET 1 B 9 PHE A 479 ASN A 481 0 SHEET 2 B 9 ALA A 451 GLY A 454 1 O VAL A 452 N GLN A 480 SHEET 3 B 9 PHE A 372 THR A 375 1 O PHE A 372 N ALA A 451 SHEET 4 B 9 VAL A 333 ASN A 338 1 O ILE A 335 N ALA A 373 SHEET 5 B 9 ARG A 81 LEU A 85 1 O ARG A 81 N ALA A 334 SHEET 6 B 9 ALA A 154 ILE A 159 1 O TYR A 155 N TYR A 84 SHEET 7 B 9 VAL A 238 ARG A 247 1 O THR A 240 N GLY A 156 SHEET 8 B 9 GLN A 219 PRO A 231 -1 N LEU A 222 O ARG A 247 SHEET 9 B 9 LEU A 198 PHE A 202 -1 O LEU A 198 N ALA A 223 SHEET 1 C 2 ASN A 167 ARG A 171 0 SHEET 2 C 2 TRP A 174 GLU A 178 -1 O TRP A 174 N ARG A 171 SHEET 1 D 2 LYS A 205 THR A 209 0 SHEET 2 D 2 GLY A 212 ILE A 216 -1 O GLY A 212 N THR A 209 SHEET 1 E 3 ARG A 386 PRO A 388 0 SHEET 2 E 3 ARG A 438 ASN A 440 -1 N ILE A 439 O TRP A 387 SHEET 3 E 3 ILE A 431 GLU A 432 -1 N GLU A 432 O ARG A 438 SHEET 1 F 6 LEU A 640 LEU A 645 0 SHEET 2 F 6 ARG A 601 GLY A 606 1 O ARG A 601 N LYS A 641 SHEET 3 F 6 ASP A 564 VAL A 567 1 N ASP A 564 O THR A 602 SHEET 4 F 6 LEU A 662 GLN A 665 1 O LEU A 662 N VAL A 565 SHEET 5 F 6 LEU A 687 GLY A 690 1 O LEU A 687 N SER A 663 SHEET 6 F 6 PHE A 709 ILE A 710 1 N PHE A 709 O THR A 688 LINK C ILE A 13 N SEP A 14 1555 1555 1.33 LINK C SEP A 14 N ILE A 15 1555 1555 1.34 LINK NZ LYS A 680 C4A PLP A 999 1555 1555 1.45 CRYST1 123.910 123.910 127.680 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008070 0.004659 0.000000 0.00000 SCALE2 0.000000 0.009319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007832 0.00000