data_1FBN # _entry.id 1FBN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FBN RCSB RCSB000938 WWPDB D_1000000938 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id BSGCAIR30365 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FBN _pdbx_database_status.recvd_initial_deposition_date 1999-04-25 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, H.' 1 'Boisvert, D.' 2 'Kim, K.K.' 3 'Kim, R.' 4 'Kim, S.H.' 5 'Berkeley Structural Genomics Center (BSGC)' 6 # _citation.id primary _citation.title 'Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 19 _citation.page_first 317 _citation.page_last 323 _citation.year 2000 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10654930 _citation.pdbx_database_id_DOI 10.1093/emboj/19.3.317 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, H.' 1 primary 'Boisvert, D.' 2 primary 'Kim, K.K.' 3 primary 'Kim, R.' 4 primary 'Kim, S.H.' 5 # _cell.entry_id 1FBN _cell.length_a 121.407 _cell.length_b 43.264 _cell.length_c 55.303 _cell.angle_alpha 90.00 _cell.angle_beta 96.99 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FBN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MJ FIBRILLARIN HOMOLOGUE' 26239.734 1 ? ? ? ? 2 water nat water 18.015 186 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)EDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYRIWNPNKSKLAAAIIKGLKV(MSE)PI KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRI(MSE)RELLDACAERENIIPILGDANKPQEYANIVEKVDVIY EDVAQPNQAEILIKNAKWFLKKGGYG(MSE)IAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHV (MSE)FVGIWEGK ; _entity_poly.pdbx_seq_one_letter_code_can ;MEDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILY LGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEIL IKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWEGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier BSGCAIR30365 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLU n 1 3 ASP n 1 4 ILE n 1 5 LYS n 1 6 ILE n 1 7 LYS n 1 8 GLU n 1 9 ILE n 1 10 PHE n 1 11 GLU n 1 12 ASN n 1 13 ILE n 1 14 TYR n 1 15 GLU n 1 16 VAL n 1 17 ASP n 1 18 LEU n 1 19 GLY n 1 20 ASP n 1 21 GLY n 1 22 LEU n 1 23 LYS n 1 24 ARG n 1 25 ILE n 1 26 ALA n 1 27 THR n 1 28 LYS n 1 29 SER n 1 30 ILE n 1 31 VAL n 1 32 LYS n 1 33 GLY n 1 34 LYS n 1 35 LYS n 1 36 VAL n 1 37 TYR n 1 38 ASP n 1 39 GLU n 1 40 LYS n 1 41 ILE n 1 42 ILE n 1 43 LYS n 1 44 ILE n 1 45 GLY n 1 46 ASP n 1 47 GLU n 1 48 GLU n 1 49 TYR n 1 50 ARG n 1 51 ILE n 1 52 TRP n 1 53 ASN n 1 54 PRO n 1 55 ASN n 1 56 LYS n 1 57 SER n 1 58 LYS n 1 59 LEU n 1 60 ALA n 1 61 ALA n 1 62 ALA n 1 63 ILE n 1 64 ILE n 1 65 LYS n 1 66 GLY n 1 67 LEU n 1 68 LYS n 1 69 VAL n 1 70 MSE n 1 71 PRO n 1 72 ILE n 1 73 LYS n 1 74 ARG n 1 75 ASP n 1 76 SER n 1 77 LYS n 1 78 ILE n 1 79 LEU n 1 80 TYR n 1 81 LEU n 1 82 GLY n 1 83 ALA n 1 84 SER n 1 85 ALA n 1 86 GLY n 1 87 THR n 1 88 THR n 1 89 PRO n 1 90 SER n 1 91 HIS n 1 92 VAL n 1 93 ALA n 1 94 ASP n 1 95 ILE n 1 96 ALA n 1 97 ASP n 1 98 LYS n 1 99 GLY n 1 100 ILE n 1 101 VAL n 1 102 TYR n 1 103 ALA n 1 104 ILE n 1 105 GLU n 1 106 TYR n 1 107 ALA n 1 108 PRO n 1 109 ARG n 1 110 ILE n 1 111 MSE n 1 112 ARG n 1 113 GLU n 1 114 LEU n 1 115 LEU n 1 116 ASP n 1 117 ALA n 1 118 CYS n 1 119 ALA n 1 120 GLU n 1 121 ARG n 1 122 GLU n 1 123 ASN n 1 124 ILE n 1 125 ILE n 1 126 PRO n 1 127 ILE n 1 128 LEU n 1 129 GLY n 1 130 ASP n 1 131 ALA n 1 132 ASN n 1 133 LYS n 1 134 PRO n 1 135 GLN n 1 136 GLU n 1 137 TYR n 1 138 ALA n 1 139 ASN n 1 140 ILE n 1 141 VAL n 1 142 GLU n 1 143 LYS n 1 144 VAL n 1 145 ASP n 1 146 VAL n 1 147 ILE n 1 148 TYR n 1 149 GLU n 1 150 ASP n 1 151 VAL n 1 152 ALA n 1 153 GLN n 1 154 PRO n 1 155 ASN n 1 156 GLN n 1 157 ALA n 1 158 GLU n 1 159 ILE n 1 160 LEU n 1 161 ILE n 1 162 LYS n 1 163 ASN n 1 164 ALA n 1 165 LYS n 1 166 TRP n 1 167 PHE n 1 168 LEU n 1 169 LYS n 1 170 LYS n 1 171 GLY n 1 172 GLY n 1 173 TYR n 1 174 GLY n 1 175 MSE n 1 176 ILE n 1 177 ALA n 1 178 ILE n 1 179 LYS n 1 180 ALA n 1 181 ARG n 1 182 SER n 1 183 ILE n 1 184 ASP n 1 185 VAL n 1 186 THR n 1 187 LYS n 1 188 ASP n 1 189 PRO n 1 190 LYS n 1 191 GLU n 1 192 ILE n 1 193 PHE n 1 194 LYS n 1 195 GLU n 1 196 GLN n 1 197 LYS n 1 198 GLU n 1 199 ILE n 1 200 LEU n 1 201 GLU n 1 202 ALA n 1 203 GLY n 1 204 GLY n 1 205 PHE n 1 206 LYS n 1 207 ILE n 1 208 VAL n 1 209 ASP n 1 210 GLU n 1 211 VAL n 1 212 ASP n 1 213 ILE n 1 214 GLU n 1 215 PRO n 1 216 PHE n 1 217 GLU n 1 218 LYS n 1 219 ASP n 1 220 HIS n 1 221 VAL n 1 222 MSE n 1 223 PHE n 1 224 VAL n 1 225 GLY n 1 226 ILE n 1 227 TRP n 1 228 GLU n 1 229 GLY n 1 230 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Methanocaldococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2190 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant PSJ1240 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET21A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLPA_METJA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q58108 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FBN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 230 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q58108 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 230 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1FBN MSE A 1 ? UNP Q58108 MET 1 'MODIFIED RESIDUE' 1 1 1 1FBN MSE A 70 ? UNP Q58108 MET 70 'MODIFIED RESIDUE' 70 2 1 1FBN MSE A 111 ? UNP Q58108 MET 111 'MODIFIED RESIDUE' 111 3 1 1FBN MSE A 175 ? UNP Q58108 MET 175 'MODIFIED RESIDUE' 175 4 1 1FBN MSE A 222 ? UNP Q58108 MET 222 'MODIFIED RESIDUE' 222 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FBN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '20% 2-PROPANOL, 20% PEG4k, 0.1M SODIUM CITRATE, pH 5.6' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 170 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1997-10-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97921 1.0 2 0.97894 1.0 3 0.96373 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97921,0.97894,0.96373 # _reflns.entry_id 1FBN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.6 _reflns.number_obs 37155 _reflns.number_all ? _reflns.percent_possible_obs 97 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 28.3 _reflns.pdbx_redundancy 2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 95.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.4 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1FBN _refine.ls_number_reflns_obs 35943 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 12 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs 95.2 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.248 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.2 _refine.ls_number_reflns_R_free 3645 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 32.9 _refine.aniso_B[1][1] 5.34 _refine.aniso_B[2][2] -6.52 _refine.aniso_B[3][3] 0.99 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 2.94 _refine.aniso_B[2][3] 0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1FBN _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.27 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.13 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1829 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 2015 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 12 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.71 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.55 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.73 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 5.82 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.34 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.6 _refine_ls_shell.d_res_low 1.7 _refine_ls_shell.number_reflns_R_work 4908 _refine_ls_shell.R_factor_R_work 0.381 _refine_ls_shell.percent_reflns_obs 87.8 _refine_ls_shell.R_factor_R_free 0.381 _refine_ls_shell.R_factor_R_free_error 0.014 _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 548 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1FBN _struct.title 'CRYSTAL STRUCTURE OF A FIBRILLARIN HOMOLOGUE FROM METHANOCOCCUS JANNASCHII, A HYPERTHERMOPHILE, AT 1.6 A' _struct.pdbx_descriptor 'MJ FIBRILLARIN HOMOLOGUE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FBN _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text ;FIBRILLARIN, MJ PROTEINS, RIBOSOMAL RNA PROCESSING, SNORNP, Structural Genomics, BSGC structure funded by NIH, Protein Structure Initiative, PSI, Berkeley Structural Genomics Center, RIBOSOME ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 58 ? ILE A 64 ? LYS A 58 ILE A 64 1 ? 7 HELX_P HELX_P2 2 THR A 87 ? ILE A 95 ? THR A 87 ILE A 95 1 ? 9 HELX_P HELX_P3 3 PRO A 108 ? ALA A 117 ? PRO A 108 ALA A 117 5 ? 10 HELX_P HELX_P4 4 PRO A 134 ? TYR A 137 ? PRO A 134 TYR A 137 5 ? 4 HELX_P HELX_P5 5 GLN A 156 ? PHE A 167 ? GLN A 156 PHE A 167 1 ? 12 HELX_P HELX_P6 6 ALA A 180 ? SER A 182 ? ALA A 180 SER A 182 5 ? 3 HELX_P HELX_P7 7 PRO A 189 ? GLY A 203 ? PRO A 189 GLY A 203 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A GLU 2 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A VAL 69 C ? ? ? 1_555 A MSE 70 N ? ? A VAL 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A MSE 70 C ? ? ? 1_555 A PRO 71 N ? ? A MSE 70 A PRO 71 1_555 ? ? ? ? ? ? ? 1.344 ? covale4 covale ? ? A ILE 110 C ? ? ? 1_555 A MSE 111 N ? ? A ILE 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A MSE 111 C ? ? ? 1_555 A ARG 112 N ? ? A MSE 111 A ARG 112 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A GLY 174 C ? ? ? 1_555 A MSE 175 N ? ? A GLY 174 A MSE 175 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A MSE 175 C ? ? ? 1_555 A ILE 176 N ? ? A MSE 175 A ILE 176 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? A VAL 221 C ? ? ? 1_555 A MSE 222 N ? ? A VAL 221 A MSE 222 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? A MSE 222 C ? ? ? 1_555 A PHE 223 N ? ? A MSE 222 A PHE 223 1_555 ? ? ? ? ? ? ? 1.326 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 5 ? ILE A 9 ? LYS A 5 ILE A 9 A 2 ILE A 13 ? ASP A 17 ? ILE A 13 ASP A 17 B 1 ALA A 26 ? LYS A 28 ? ALA A 26 LYS A 28 B 2 GLU A 47 ? ILE A 51 ? GLU A 47 ILE A 51 B 3 ILE A 41 ? ILE A 44 ? ILE A 41 ILE A 44 C 1 VAL A 146 ? GLU A 149 ? VAL A 146 GLU A 149 C 2 LYS A 77 ? LEU A 81 ? LYS A 77 LEU A 81 C 3 ILE A 100 ? GLU A 105 ? ILE A 100 GLU A 105 C 4 ILE A 124 ? LEU A 128 ? ILE A 124 LEU A 128 D 1 PHE A 205 ? ASP A 209 ? PHE A 205 ASP A 209 D 2 VAL A 224 ? TRP A 227 ? VAL A 224 TRP A 227 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 5 ? O LYS A 5 N ASP A 17 ? N ASP A 17 B 1 2 O THR A 27 ? O THR A 27 N ARG A 50 ? N ARG A 50 B 2 3 O GLU A 47 ? O GLU A 47 N ILE A 44 ? N ILE A 44 C 1 2 O VAL A 146 ? O VAL A 146 N LEU A 79 ? N LEU A 79 C 2 3 O ILE A 78 ? O ILE A 78 N ILE A 100 ? N ILE A 100 C 3 4 O VAL A 101 ? O VAL A 101 N ILE A 125 ? N ILE A 125 D 1 2 O LYS A 206 ? O LYS A 206 N ILE A 226 ? N ILE A 226 # _database_PDB_matrix.entry_id 1FBN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FBN _atom_sites.fract_transf_matrix[1][1] 0.008237 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001010 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023114 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018218 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 MSE 70 70 70 MSE MSE A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 MSE 111 111 111 MSE MSE A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 GLN 156 156 156 GLN GLN A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 TRP 166 166 166 TRP TRP A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 MSE 175 175 175 MSE MSE A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 LYS 194 194 194 LYS LYS A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 GLN 196 196 196 GLN GLN A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 PHE 205 205 205 PHE PHE A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 PHE 216 216 216 PHE PHE A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 HIS 220 220 220 HIS HIS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 MSE 222 222 222 MSE MSE A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 VAL 224 224 224 VAL VAL A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 TRP 227 227 227 TRP TRP A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 GLY 229 229 229 GLY GLY A . n A 1 230 LYS 230 230 230 LYS LYS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Berkeley Structural Genomics Center' _pdbx_SG_project.initial_of_center BSGC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 70 A MSE 70 ? MET SELENOMETHIONINE 3 A MSE 111 A MSE 111 ? MET SELENOMETHIONINE 4 A MSE 175 A MSE 175 ? MET SELENOMETHIONINE 5 A MSE 222 A MSE 222 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-26 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-11-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 10 ? ? 51.84 -122.29 2 1 THR A 87 ? ? -52.62 -73.20 3 1 ALA A 119 ? ? -35.44 -74.19 4 1 GLU A 214 ? ? -22.55 -57.83 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 400 400 HOH HOH A . B 2 HOH 2 401 401 HOH HOH A . B 2 HOH 3 402 402 HOH HOH A . B 2 HOH 4 403 403 HOH HOH A . B 2 HOH 5 404 404 HOH HOH A . B 2 HOH 6 405 405 HOH HOH A . B 2 HOH 7 406 406 HOH HOH A . B 2 HOH 8 407 407 HOH HOH A . B 2 HOH 9 408 408 HOH HOH A . B 2 HOH 10 409 409 HOH HOH A . B 2 HOH 11 410 410 HOH HOH A . B 2 HOH 12 411 411 HOH HOH A . B 2 HOH 13 412 412 HOH HOH A . B 2 HOH 14 413 413 HOH HOH A . B 2 HOH 15 414 414 HOH HOH A . B 2 HOH 16 415 415 HOH HOH A . B 2 HOH 17 416 416 HOH HOH A . B 2 HOH 18 417 417 HOH HOH A . B 2 HOH 19 418 418 HOH HOH A . B 2 HOH 20 419 419 HOH HOH A . B 2 HOH 21 420 420 HOH HOH A . B 2 HOH 22 421 421 HOH HOH A . B 2 HOH 23 422 422 HOH HOH A . B 2 HOH 24 423 423 HOH HOH A . B 2 HOH 25 424 424 HOH HOH A . B 2 HOH 26 425 425 HOH HOH A . B 2 HOH 27 426 426 HOH HOH A . B 2 HOH 28 427 427 HOH HOH A . B 2 HOH 29 428 428 HOH HOH A . B 2 HOH 30 429 429 HOH HOH A . B 2 HOH 31 430 430 HOH HOH A . B 2 HOH 32 431 431 HOH HOH A . B 2 HOH 33 432 432 HOH HOH A . B 2 HOH 34 433 433 HOH HOH A . B 2 HOH 35 434 434 HOH HOH A . B 2 HOH 36 435 435 HOH HOH A . B 2 HOH 37 436 436 HOH HOH A . B 2 HOH 38 437 437 HOH HOH A . B 2 HOH 39 438 438 HOH HOH A . B 2 HOH 40 439 439 HOH HOH A . B 2 HOH 41 440 440 HOH HOH A . B 2 HOH 42 441 441 HOH HOH A . B 2 HOH 43 442 442 HOH HOH A . B 2 HOH 44 443 443 HOH HOH A . B 2 HOH 45 444 444 HOH HOH A . B 2 HOH 46 445 445 HOH HOH A . B 2 HOH 47 446 446 HOH HOH A . B 2 HOH 48 447 447 HOH HOH A . B 2 HOH 49 448 448 HOH HOH A . B 2 HOH 50 449 449 HOH HOH A . B 2 HOH 51 450 450 HOH HOH A . B 2 HOH 52 451 451 HOH HOH A . B 2 HOH 53 452 452 HOH HOH A . B 2 HOH 54 453 453 HOH HOH A . B 2 HOH 55 454 454 HOH HOH A . B 2 HOH 56 455 455 HOH HOH A . B 2 HOH 57 456 456 HOH HOH A . B 2 HOH 58 457 457 HOH HOH A . B 2 HOH 59 458 458 HOH HOH A . B 2 HOH 60 459 459 HOH HOH A . B 2 HOH 61 460 460 HOH HOH A . B 2 HOH 62 461 461 HOH HOH A . B 2 HOH 63 462 462 HOH HOH A . B 2 HOH 64 463 463 HOH HOH A . B 2 HOH 65 464 464 HOH HOH A . B 2 HOH 66 465 465 HOH HOH A . B 2 HOH 67 466 466 HOH HOH A . B 2 HOH 68 467 467 HOH HOH A . B 2 HOH 69 468 468 HOH HOH A . B 2 HOH 70 469 469 HOH HOH A . B 2 HOH 71 470 470 HOH HOH A . B 2 HOH 72 471 471 HOH HOH A . B 2 HOH 73 472 472 HOH HOH A . B 2 HOH 74 473 473 HOH HOH A . B 2 HOH 75 474 474 HOH HOH A . B 2 HOH 76 475 475 HOH HOH A . B 2 HOH 77 476 476 HOH HOH A . B 2 HOH 78 477 477 HOH HOH A . B 2 HOH 79 478 478 HOH HOH A . B 2 HOH 80 479 479 HOH HOH A . B 2 HOH 81 480 480 HOH HOH A . B 2 HOH 82 481 481 HOH HOH A . B 2 HOH 83 482 482 HOH HOH A . B 2 HOH 84 483 483 HOH HOH A . B 2 HOH 85 484 484 HOH HOH A . B 2 HOH 86 485 485 HOH HOH A . B 2 HOH 87 486 486 HOH HOH A . B 2 HOH 88 487 487 HOH HOH A . B 2 HOH 89 488 488 HOH HOH A . B 2 HOH 90 489 489 HOH HOH A . B 2 HOH 91 490 490 HOH HOH A . B 2 HOH 92 491 491 HOH HOH A . B 2 HOH 93 492 492 HOH HOH A . B 2 HOH 94 493 493 HOH HOH A . B 2 HOH 95 494 494 HOH HOH A . B 2 HOH 96 495 495 HOH HOH A . B 2 HOH 97 496 496 HOH HOH A . B 2 HOH 98 497 497 HOH HOH A . B 2 HOH 99 498 498 HOH HOH A . B 2 HOH 100 499 499 HOH HOH A . B 2 HOH 101 500 500 HOH HOH A . B 2 HOH 102 501 501 HOH HOH A . B 2 HOH 103 502 502 HOH HOH A . B 2 HOH 104 503 503 HOH HOH A . B 2 HOH 105 504 504 HOH HOH A . B 2 HOH 106 505 505 HOH HOH A . B 2 HOH 107 506 506 HOH HOH A . B 2 HOH 108 507 507 HOH HOH A . B 2 HOH 109 508 508 HOH HOH A . B 2 HOH 110 509 509 HOH HOH A . B 2 HOH 111 510 510 HOH HOH A . B 2 HOH 112 511 511 HOH HOH A . B 2 HOH 113 512 512 HOH HOH A . B 2 HOH 114 513 513 HOH HOH A . B 2 HOH 115 514 514 HOH HOH A . B 2 HOH 116 515 515 HOH HOH A . B 2 HOH 117 516 516 HOH HOH A . B 2 HOH 118 517 517 HOH HOH A . B 2 HOH 119 518 518 HOH HOH A . B 2 HOH 120 519 519 HOH HOH A . B 2 HOH 121 520 520 HOH HOH A . B 2 HOH 122 521 521 HOH HOH A . B 2 HOH 123 522 522 HOH HOH A . B 2 HOH 124 523 523 HOH HOH A . B 2 HOH 125 524 524 HOH HOH A . B 2 HOH 126 525 525 HOH HOH A . B 2 HOH 127 526 526 HOH HOH A . B 2 HOH 128 527 527 HOH HOH A . B 2 HOH 129 528 528 HOH HOH A . B 2 HOH 130 529 529 HOH HOH A . B 2 HOH 131 530 530 HOH HOH A . B 2 HOH 132 531 531 HOH HOH A . B 2 HOH 133 532 532 HOH HOH A . B 2 HOH 134 533 533 HOH HOH A . B 2 HOH 135 534 534 HOH HOH A . B 2 HOH 136 535 535 HOH HOH A . B 2 HOH 137 536 536 HOH HOH A . B 2 HOH 138 537 537 HOH HOH A . B 2 HOH 139 538 538 HOH HOH A . B 2 HOH 140 539 539 HOH HOH A . B 2 HOH 141 540 540 HOH HOH A . B 2 HOH 142 541 541 HOH HOH A . B 2 HOH 143 542 542 HOH HOH A . B 2 HOH 144 543 543 HOH HOH A . B 2 HOH 145 544 544 HOH HOH A . B 2 HOH 146 545 545 HOH HOH A . B 2 HOH 147 546 546 HOH HOH A . B 2 HOH 148 547 547 HOH HOH A . B 2 HOH 149 548 548 HOH HOH A . B 2 HOH 150 549 549 HOH HOH A . B 2 HOH 151 550 550 HOH HOH A . B 2 HOH 152 551 551 HOH HOH A . B 2 HOH 153 552 552 HOH HOH A . B 2 HOH 154 553 553 HOH HOH A . B 2 HOH 155 554 554 HOH HOH A . B 2 HOH 156 555 555 HOH HOH A . B 2 HOH 157 556 556 HOH HOH A . B 2 HOH 158 557 557 HOH HOH A . B 2 HOH 159 558 558 HOH HOH A . B 2 HOH 160 559 559 HOH HOH A . B 2 HOH 161 560 560 HOH HOH A . B 2 HOH 162 561 561 HOH HOH A . B 2 HOH 163 562 562 HOH HOH A . B 2 HOH 164 563 563 HOH HOH A . B 2 HOH 165 564 564 HOH HOH A . B 2 HOH 166 565 565 HOH HOH A . B 2 HOH 167 566 566 HOH HOH A . B 2 HOH 168 567 567 HOH HOH A . B 2 HOH 169 568 568 HOH HOH A . B 2 HOH 170 569 569 HOH HOH A . B 2 HOH 171 570 570 HOH HOH A . B 2 HOH 172 571 571 HOH HOH A . B 2 HOH 173 572 572 HOH HOH A . B 2 HOH 174 573 573 HOH HOH A . B 2 HOH 175 574 574 HOH HOH A . B 2 HOH 176 575 575 HOH HOH A . B 2 HOH 177 576 576 HOH HOH A . B 2 HOH 178 577 577 HOH HOH A . B 2 HOH 179 578 578 HOH HOH A . B 2 HOH 180 579 579 HOH HOH A . B 2 HOH 181 580 580 HOH HOH A . B 2 HOH 182 581 581 HOH HOH A . B 2 HOH 183 582 582 HOH HOH A . B 2 HOH 184 583 583 HOH HOH A . B 2 HOH 185 584 584 HOH HOH A . B 2 HOH 186 585 585 HOH HOH A . #