HEADER HYDROLASE 19-JUL-00 1FCV TITLE CRYSTAL STRUCTURE OF BEE VENOM HYALURONIDASE IN COMPLEX WITH TITLE 2 HYALURONIC ACID TETRAMER CAVEAT 1FCV NAG B 2 HAS WRONG CHIRALITY AT ATOM C1 GCU B 3 HAS WRONG CAVEAT 2 1FCV CHIRALITY AT ATOM C1 GCU B 5 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYALURONOGLUCOSAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HYALURONIDASE, API M II; COMPND 5 EC: 3.2.1.35; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: APIS MELLIFERA; SOURCE 3 ORGANISM_COMMON: HONEY BEE; SOURCE 4 ORGANISM_TAXID: 7460; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL: HIGH-FIVE INSECT CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PMELBAC A KEYWDS 7 STRANDED TIM BARREL, ALLERGEN, GLYCOSIDASE FAMILY 56, HYALURONIC KEYWDS 2 ACID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.MARKOVIC-HOUSLEY,G.MIGLIERINI,L.SOLDATOVA,P.J.RIZKALLAH,U.MUELLER, AUTHOR 2 T.SCHIRMER REVDAT 6 29-JUL-20 1FCV 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 25-NOV-15 1FCV 1 AUTHOR REVDAT 4 13-JUL-11 1FCV 1 VERSN REVDAT 3 24-FEB-09 1FCV 1 VERSN REVDAT 2 01-APR-03 1FCV 1 JRNL REVDAT 1 01-OCT-01 1FCV 0 JRNL AUTH Z.MARKOVIC-HOUSLEY,G.MIGLIERINI,L.SOLDATOVA,P.J.RIZKALLAH, JRNL AUTH 2 U.MULLER,T.SCHIRMER JRNL TITL CRYSTAL STRUCTURE OF HYALURONIDASE, A MAJOR ALLERGEN OF BEE JRNL TITL 2 VENOM. JRNL REF STRUCTURE FOLD.DES. V. 8 1025 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11080624 JRNL DOI 10.1016/S0969-2126(00)00511-6 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1295 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2681 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.009 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.032 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FCV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1000011485. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-00 REMARK 200 TEMPERATURE (KELVIN) : 277 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR571 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.29500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULPHATE, NA REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.88400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.44200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.44200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 100.88400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 ASN A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 VAL A 8 REMARK 465 ARG A 9 REMARK 465 ASN A 334 REMARK 465 ASN A 335 REMARK 465 ASN A 336 REMARK 465 ALA A 337 REMARK 465 ASN A 338 REMARK 465 ASP A 339 REMARK 465 ARG A 340 REMARK 465 LEU A 341 REMARK 465 THR A 342 REMARK 465 VAL A 343 REMARK 465 ASP A 344 REMARK 465 VAL A 345 REMARK 465 SER A 346 REMARK 465 VAL A 347 REMARK 465 ASP A 348 REMARK 465 GLN A 349 REMARK 465 VAL A 350 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 LEU A 333 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 10 CG CD OE1 OE2 REMARK 480 GLU A 30 CG CD OE1 OE2 REMARK 480 ASP A 93 CG OD1 OD2 REMARK 480 LYS A 131 CD CE NZ REMARK 480 ARG A 138 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 174 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 280 NE CZ NH1 NH2 REMARK 480 ARG A 330 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 332 N LEU A 333 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 236 NZ LYS A 261 4455 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 10 CB GLU A 10 CG 0.149 REMARK 500 ALA A 332 C LEU A 333 N -0.256 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 28 CD - NE - CZ ANGL. DEV. = 10.7 DEGREES REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A 44 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 47 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 116 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 TRP A 123 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 155 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 155 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 TYR A 160 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 176 CD - NE - CZ ANGL. DEV. = 9.5 DEGREES REMARK 500 ARG A 176 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 TYR A 183 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 229 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 244 NH1 - CZ - NH2 ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG A 244 NE - CZ - NH1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG A 250 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 250 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 THR A 256 N - CA - CB ANGL. DEV. = -13.4 DEGREES REMARK 500 ARG A 273 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 280 CG - CD - NE ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 288 CA - CB - CG ANGL. DEV. = 13.3 DEGREES REMARK 500 ARG A 317 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ALA A 332 CA - C - N ANGL. DEV. = 23.9 DEGREES REMARK 500 ALA A 332 O - C - N ANGL. DEV. = -29.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 124 -121.45 41.06 REMARK 500 ALA A 185 -4.64 78.26 REMARK 500 CYS A 189 -35.93 -140.02 REMARK 500 MET A 212 35.56 -95.68 REMARK 500 ARG A 273 56.99 -174.21 REMARK 500 ILE A 307 43.82 -142.73 REMARK 500 GLU A 323 -67.53 -133.53 REMARK 500 ILE A 331 -105.88 -75.93 REMARK 500 ALA A 332 -65.98 -29.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 66 -14.77 REMARK 500 ASP A 101 -10.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FCQ RELATED DB: PDB REMARK 900 1FCQ IS THE SAME PROTEIN WITHOUT LIGAND IN A DIFFERENT CRYSTAL FORM REMARK 900 RELATED ID: 1FCU RELATED DB: PDB REMARK 900 1FCU IS THE SAME PROTEIN WITHOUT LIGAND IN THE SAME CRYSTAL FORM DBREF 1FCV A 1 350 UNP Q08169 HUGA_APIME 33 382 SEQRES 1 A 350 THR PRO ASP ASN ASN LYS THR VAL ARG GLU PHE ASN VAL SEQRES 2 A 350 TYR TRP ASN VAL PRO THR PHE MET CYS HIS LYS TYR GLY SEQRES 3 A 350 LEU ARG PHE GLU GLU VAL SER GLU LYS TYR GLY ILE LEU SEQRES 4 A 350 GLN ASN TRP MET ASP LYS PHE ARG GLY GLU GLU ILE ALA SEQRES 5 A 350 ILE LEU TYR ASP PRO GLY MET PHE PRO ALA LEU LEU LYS SEQRES 6 A 350 ASP PRO ASN GLY ASN VAL VAL ALA ARG ASN GLY GLY VAL SEQRES 7 A 350 PRO GLN LEU GLY ASN LEU THR LYS HIS LEU GLN VAL PHE SEQRES 8 A 350 ARG ASP HIS LEU ILE ASN GLN ILE PRO ASP LYS SER PHE SEQRES 9 A 350 PRO GLY VAL GLY VAL ILE ASP PHE GLU SER TRP ARG PRO SEQRES 10 A 350 ILE PHE ARG GLN ASN TRP ALA SER LEU GLN PRO TYR LYS SEQRES 11 A 350 LYS LEU SER VAL GLU VAL VAL ARG ARG GLU HIS PRO PHE SEQRES 12 A 350 TRP ASP ASP GLN ARG VAL GLU GLN GLU ALA LYS ARG ARG SEQRES 13 A 350 PHE GLU LYS TYR GLY GLN LEU PHE MET GLU GLU THR LEU SEQRES 14 A 350 LYS ALA ALA LYS ARG MET ARG PRO ALA ALA ASN TRP GLY SEQRES 15 A 350 TYR TYR ALA TYR PRO TYR CYS TYR ASN LEU THR PRO ASN SEQRES 16 A 350 GLN PRO SER ALA GLN CYS GLU ALA THR THR MET GLN GLU SEQRES 17 A 350 ASN ASP LYS MET SER TRP LEU PHE GLU SER GLU ASP VAL SEQRES 18 A 350 LEU LEU PRO SER VAL TYR LEU ARG TRP ASN LEU THR SER SEQRES 19 A 350 GLY GLU ARG VAL GLY LEU VAL GLY GLY ARG VAL LYS GLU SEQRES 20 A 350 ALA LEU ARG ILE ALA ARG GLN MET THR THR SER ARG LYS SEQRES 21 A 350 LYS VAL LEU PRO TYR TYR TRP TYR LYS TYR GLN ASP ARG SEQRES 22 A 350 ARG ASP THR ASP LEU SER ARG ALA ASP LEU GLU ALA THR SEQRES 23 A 350 LEU ARG LYS ILE THR ASP LEU GLY ALA ASP GLY PHE ILE SEQRES 24 A 350 ILE TRP GLY SER SER ASP ASP ILE ASN THR LYS ALA LYS SEQRES 25 A 350 CYS LEU GLN PHE ARG GLU TYR LEU ASN ASN GLU LEU GLY SEQRES 26 A 350 PRO ALA VAL LYS ARG ILE ALA LEU ASN ASN ASN ALA ASN SEQRES 27 A 350 ASP ARG LEU THR VAL ASP VAL SER VAL ASP GLN VAL HET GCU B 1 1 HET NAG B 2 14 HET GCU B 3 12 HET NAG B 4 14 HET GCU B 5 12 HETNAM GCU ALPHA-D-GLUCOPYRANURONIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 2 GCU 3(C6 H10 O7) FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 HOH *132(H2 O) HELIX 1 1 PRO A 18 GLY A 26 5 9 HELIX 2 2 GLU A 30 LYS A 35 1 6 HELIX 3 3 ASN A 41 LYS A 45 5 5 HELIX 4 4 ASN A 75 GLY A 77 5 3 HELIX 5 5 VAL A 78 GLY A 82 5 5 HELIX 6 6 ASN A 83 ILE A 99 1 17 HELIX 7 7 ILE A 118 ASN A 122 5 5 HELIX 8 8 TRP A 123 LEU A 126 5 4 HELIX 9 9 GLN A 127 HIS A 141 1 15 HELIX 10 10 ASP A 145 ARG A 176 1 32 HELIX 11 11 GLU A 202 MET A 212 1 11 HELIX 12 12 MET A 212 GLU A 219 1 8 HELIX 13 13 THR A 233 ARG A 253 1 21 HELIX 14 14 SER A 279 GLY A 294 1 16 HELIX 15 15 SER A 303 ILE A 307 5 5 HELIX 16 16 THR A 309 GLU A 323 1 15 HELIX 17 17 GLU A 323 ILE A 331 1 9 SHEET 1 A 3 ASN A 12 ASN A 16 0 SHEET 2 A 3 GLY A 297 TRP A 301 1 O PHE A 298 N TYR A 14 SHEET 3 A 3 TYR A 265 TRP A 267 1 N TYR A 266 O ILE A 299 SHEET 1 B 3 ILE A 51 TYR A 55 0 SHEET 2 B 3 VAL A 107 ASP A 111 1 O VAL A 107 N ALA A 52 SHEET 3 B 3 ASN A 180 TYR A 183 1 O ASN A 180 N GLY A 108 SHEET 1 C 2 ALA A 62 LYS A 65 0 SHEET 2 C 2 VAL A 71 ARG A 74 -1 N VAL A 72 O LEU A 64 SHEET 1 D 2 VAL A 221 LEU A 222 0 SHEET 2 D 2 LYS A 261 VAL A 262 1 O LYS A 261 N LEU A 222 SHEET 1 E 2 LYS A 269 TYR A 270 0 SHEET 2 E 2 ARG A 273 ASP A 277 -1 N ARG A 273 O TYR A 270 SSBOND 1 CYS A 22 CYS A 313 1555 1555 2.05 SSBOND 2 CYS A 189 CYS A 201 1555 1555 1.99 LINK O4 GCU B 1 C1 NAG B 2 1555 1555 1.35 LINK O3 NAG B 2 C1 GCU B 3 1555 1555 1.30 LINK O4 GCU B 3 C1 NAG B 4 1555 1555 1.33 LINK O3 NAG B 4 C1 GCU B 5 1555 1555 1.31 CISPEP 1 TYR A 186 PRO A 187 0 2.58 CRYST1 71.012 71.012 151.326 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014080 0.008130 0.000000 0.00000 SCALE2 0.000000 0.016260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006610 0.00000