HEADER IMMUNE SYSTEM 28-JUL-00 1FG9 TITLE 3:1 COMPLEX OF INTERFERON-GAMMA RECEPTOR WITH INTERFERON-GAMMA DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERFERON GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: 10 C-TERMINAL RESIDUES DELETED; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTERFERON-GAMMA RECEPTOR ALPHA CHAIN; COMPND 8 CHAIN: C, D, E; COMPND 9 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: SF9 INSECT CELLS KEYWDS CYTOKINE-RECEPTOR COMPLEX, FIBRONECTIN TYPE-III, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.J.THIEL,M.-H.LE DU,R.L.WALTER,A.D'ARCY,C.CHENE,M.FOUNTOULAKIS, AUTHOR 2 G.GAROTTA,F.K.WINKLER,S.E.EALICK REVDAT 5 21-DEC-22 1FG9 1 SEQADV REVDAT 4 24-FEB-09 1FG9 1 VERSN REVDAT 3 01-APR-03 1FG9 1 JRNL REVDAT 2 29-NOV-00 1FG9 1 JRNL SOURCE REVDAT 1 11-AUG-00 1FG9 0 JRNL AUTH D.J.THIEL,M.H.LE DU,R.L.WALTER,A.D'ARCY,C.CHENE, JRNL AUTH 2 M.FOUNTOULAKIS,G.GAROTTA,F.K.WINKLER,S.E.EALICK JRNL TITL OBSERVATION OF AN UNEXPECTED THIRD RECEPTOR MOLECULE IN THE JRNL TITL 2 CRYSTAL STRUCTURE OF HUMAN INTERFERON-GAMMA RECEPTOR JRNL TITL 3 COMPLEX. JRNL REF STRUCTURE FOLD.DES. V. 8 927 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 10986460 JRNL DOI 10.1016/S0969-2126(00)00184-2 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6905 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 2.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-00. REMARK 100 THE DEPOSITION ID IS D_1000011566. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : CHESS; CHESS REMARK 200 BEAMLINE : A1; F2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.92; 0.9795 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : PRINCETON 2K; CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33105 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% PEG 8000, TRIS, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 99.65000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 99.65000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 57.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 127 REMARK 465 LYS A 128 REMARK 465 ARG A 129 REMARK 465 LYS A 130 REMARK 465 ARG A 131 REMARK 465 SER A 132 REMARK 465 GLN A 133 REMARK 465 GLY B 127 REMARK 465 LYS B 128 REMARK 465 ARG B 129 REMARK 465 LYS B 130 REMARK 465 ARG B 131 REMARK 465 SER B 132 REMARK 465 GLN B 133 REMARK 465 GLU C 1 REMARK 465 MET C 2 REMARK 465 GLY C 3 REMARK 465 THR C 4 REMARK 465 ALA C 5 REMARK 465 ASP C 6 REMARK 465 LEU C 7 REMARK 465 GLY C 8 REMARK 465 PRO C 9 REMARK 465 SER C 10 REMARK 465 SER C 11 REMARK 465 VAL C 142 REMARK 465 ASP C 143 REMARK 465 TYR C 144 REMARK 465 SER C 225 REMARK 465 ILE C 226 REMARK 465 LYS C 227 REMARK 465 GLY C 228 REMARK 465 SER C 229 REMARK 465 LEU C 230 REMARK 465 TRP C 231 REMARK 465 ILE C 232 REMARK 465 PRO C 233 REMARK 465 VAL C 234 REMARK 465 VAL C 235 REMARK 465 ALA C 236 REMARK 465 ALA C 237 REMARK 465 LEU C 238 REMARK 465 LEU C 239 REMARK 465 LEU C 240 REMARK 465 PHE C 241 REMARK 465 LEU C 242 REMARK 465 VAL C 243 REMARK 465 LEU C 244 REMARK 465 SER C 245 REMARK 465 GLU D 1 REMARK 465 MET D 2 REMARK 465 GLY D 3 REMARK 465 THR D 4 REMARK 465 ALA D 5 REMARK 465 ASP D 6 REMARK 465 LEU D 7 REMARK 465 GLY D 8 REMARK 465 PRO D 9 REMARK 465 SER D 10 REMARK 465 VAL D 142 REMARK 465 ASP D 143 REMARK 465 TYR D 144 REMARK 465 ASP D 145 REMARK 465 PRO D 146 REMARK 465 GLU D 147 REMARK 465 PHE D 222 REMARK 465 ASN D 223 REMARK 465 SER D 224 REMARK 465 SER D 225 REMARK 465 ILE D 226 REMARK 465 LYS D 227 REMARK 465 GLY D 228 REMARK 465 SER D 229 REMARK 465 LEU D 230 REMARK 465 TRP D 231 REMARK 465 ILE D 232 REMARK 465 PRO D 233 REMARK 465 VAL D 234 REMARK 465 VAL D 235 REMARK 465 ALA D 236 REMARK 465 ALA D 237 REMARK 465 LEU D 238 REMARK 465 LEU D 239 REMARK 465 LEU D 240 REMARK 465 PHE D 241 REMARK 465 LEU D 242 REMARK 465 VAL D 243 REMARK 465 LEU D 244 REMARK 465 SER D 245 REMARK 465 GLU E 1 REMARK 465 MET E 2 REMARK 465 GLY E 3 REMARK 465 THR E 4 REMARK 465 ALA E 5 REMARK 465 ASP E 6 REMARK 465 LEU E 7 REMARK 465 GLY E 8 REMARK 465 PRO E 9 REMARK 465 SER E 10 REMARK 465 SER E 11 REMARK 465 VAL E 12 REMARK 465 TYR E 96 REMARK 465 ALA E 97 REMARK 465 LYS E 98 REMARK 465 VAL E 133 REMARK 465 PHE E 134 REMARK 465 VAL E 135 REMARK 465 ASN E 136 REMARK 465 GLY E 137 REMARK 465 ASP E 138 REMARK 465 GLU E 139 REMARK 465 GLN E 140 REMARK 465 GLU E 141 REMARK 465 VAL E 142 REMARK 465 ASP E 143 REMARK 465 TYR E 144 REMARK 465 ASP E 145 REMARK 465 PHE E 222 REMARK 465 ASN E 223 REMARK 465 SER E 224 REMARK 465 SER E 225 REMARK 465 ILE E 226 REMARK 465 LYS E 227 REMARK 465 GLY E 228 REMARK 465 SER E 229 REMARK 465 LEU E 230 REMARK 465 TRP E 231 REMARK 465 ILE E 232 REMARK 465 PRO E 233 REMARK 465 VAL E 234 REMARK 465 VAL E 235 REMARK 465 ALA E 236 REMARK 465 ALA E 237 REMARK 465 LEU E 238 REMARK 465 LEU E 239 REMARK 465 LEU E 240 REMARK 465 PHE E 241 REMARK 465 LEU E 242 REMARK 465 VAL E 243 REMARK 465 LEU E 244 REMARK 465 SER E 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 126 OG1 CG2 REMARK 470 VAL C 12 CG1 CG2 REMARK 470 GLN C 91 CG CD OE1 NE2 REMARK 470 GLU C 139 CG CD OE1 OE2 REMARK 470 GLN C 140 CG CD OE1 NE2 REMARK 470 GLU C 141 CG CD OE1 OE2 REMARK 470 ASP C 145 CG OD1 OD2 REMARK 470 GLN D 91 CG CD OE1 NE2 REMARK 470 ASN D 136 CG OD1 ND2 REMARK 470 GLU D 139 CG CD OE1 OE2 REMARK 470 GLN D 140 CG CD OE1 NE2 REMARK 470 GLU D 141 CG CD OE1 OE2 REMARK 470 ILE D 221 CG1 CG2 CD1 REMARK 470 GLN E 91 CG CD OE1 NE2 REMARK 470 ILE E 221 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 19 N - CA - CB ANGL. DEV. = -10.8 DEGREES REMARK 500 LEU A 56 CA - CB - CG ANGL. DEV. = 21.7 DEGREES REMARK 500 LEU B 56 CA - CB - CG ANGL. DEV. = 19.6 DEGREES REMARK 500 GLY C 90 N - CA - C ANGL. DEV. = -20.3 DEGREES REMARK 500 SER C 194 N - CA - C ANGL. DEV. = 18.7 DEGREES REMARK 500 PRO D 13 C - N - CA ANGL. DEV. = 10.8 DEGREES REMARK 500 PRO D 13 N - CA - C ANGL. DEV. = 18.1 DEGREES REMARK 500 GLU D 121 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 19 130.31 169.42 REMARK 500 SER A 20 -71.80 -12.13 REMARK 500 ASN A 25 80.67 66.37 REMARK 500 PHE A 29 -78.23 -92.50 REMARK 500 LEU A 30 -50.72 -10.59 REMARK 500 PHE A 60 20.70 -143.65 REMARK 500 ASP A 63 89.91 -58.20 REMARK 500 ASN A 83 48.23 36.84 REMARK 500 SER A 84 18.43 54.63 REMARK 500 SER A 99 101.87 -59.63 REMARK 500 VAL A 100 4.41 -64.29 REMARK 500 PRO A 122 112.67 -35.76 REMARK 500 ALA A 124 91.18 -160.91 REMARK 500 LYS A 125 85.13 -155.73 REMARK 500 SER B 20 -58.72 -24.92 REMARK 500 ASN B 25 79.62 66.04 REMARK 500 PHE B 29 -80.26 -92.00 REMARK 500 LEU B 30 -53.16 -7.66 REMARK 500 ASN B 59 21.06 -73.38 REMARK 500 PHE B 60 19.49 -144.87 REMARK 500 ASN B 83 49.74 36.23 REMARK 500 SER B 84 18.21 53.94 REMARK 500 VAL B 100 4.55 -64.61 REMARK 500 GLU B 112 20.98 -75.11 REMARK 500 MET C 25 72.04 62.16 REMARK 500 ASN C 26 99.18 179.69 REMARK 500 TYR C 33 142.75 178.24 REMARK 500 TYR C 49 136.39 -34.40 REMARK 500 ASN C 53 -100.60 -118.56 REMARK 500 SER C 54 10.62 -154.86 REMARK 500 ASN C 62 63.30 38.08 REMARK 500 HIS C 65 -161.89 -74.24 REMARK 500 SER C 71 -33.17 -39.37 REMARK 500 ASP C 72 40.18 -91.64 REMARK 500 PRO C 77 10.17 -57.04 REMARK 500 SER C 80 140.34 -29.77 REMARK 500 VAL C 89 146.35 -172.46 REMARK 500 GLN C 91 -2.76 162.84 REMARK 500 ARG C 118 -153.83 -165.63 REMARK 500 GLU C 121 -100.44 17.75 REMARK 500 ASN C 136 -33.12 -157.96 REMARK 500 ASP C 138 128.25 -24.26 REMARK 500 GLU C 139 -33.45 -137.86 REMARK 500 GLN C 140 90.07 73.86 REMARK 500 CYS C 150 77.59 -101.94 REMARK 500 ASN C 162 -78.42 2.70 REMARK 500 ILE C 170 112.09 -163.20 REMARK 500 GLN C 173 -83.60 -92.33 REMARK 500 GLU C 175 142.42 172.32 REMARK 500 ILE C 181 -67.23 -100.86 REMARK 500 REMARK 500 THIS ENTRY HAS 121 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 96 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS D 205 15.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 1FG9 A 1 133 UNP P01579 IFNG_HUMAN 24 156 DBREF 1FG9 B 1 133 UNP P01579 IFNG_HUMAN 24 156 DBREF 1FG9 C 1 245 UNP P15260 INGR1_HUMAN 18 262 DBREF 1FG9 D 1 245 UNP P15260 INGR1_HUMAN 18 262 DBREF 1FG9 E 1 245 UNP P15260 INGR1_HUMAN 18 262 SEQADV 1FG9 MET A 0 UNP P01579 INITIATING METHIONINE SEQADV 1FG9 MET B 0 UNP P01579 INITIATING METHIONINE SEQRES 1 A 134 MET GLN ASP PRO TYR VAL LYS GLU ALA GLU ASN LEU LYS SEQRES 2 A 134 LYS TYR PHE ASN ALA GLY HIS SER ASP VAL ALA ASP ASN SEQRES 3 A 134 GLY THR LEU PHE LEU GLY ILE LEU LYS ASN TRP LYS GLU SEQRES 4 A 134 GLU SER ASP ARG LYS ILE MET GLN SER GLN ILE VAL SER SEQRES 5 A 134 PHE TYR PHE LYS LEU PHE LYS ASN PHE LYS ASP ASP GLN SEQRES 6 A 134 SER ILE GLN LYS SER VAL GLU THR ILE LYS GLU ASP MET SEQRES 7 A 134 ASN VAL LYS PHE PHE ASN SER ASN LYS LYS LYS ARG ASP SEQRES 8 A 134 ASP PHE GLU LYS LEU THR ASN TYR SER VAL THR ASP LEU SEQRES 9 A 134 ASN VAL GLN ARG LYS ALA ILE HIS GLU LEU ILE GLN VAL SEQRES 10 A 134 MET ALA GLU LEU SER PRO ALA ALA LYS THR GLY LYS ARG SEQRES 11 A 134 LYS ARG SER GLN SEQRES 1 B 134 MET GLN ASP PRO TYR VAL LYS GLU ALA GLU ASN LEU LYS SEQRES 2 B 134 LYS TYR PHE ASN ALA GLY HIS SER ASP VAL ALA ASP ASN SEQRES 3 B 134 GLY THR LEU PHE LEU GLY ILE LEU LYS ASN TRP LYS GLU SEQRES 4 B 134 GLU SER ASP ARG LYS ILE MET GLN SER GLN ILE VAL SER SEQRES 5 B 134 PHE TYR PHE LYS LEU PHE LYS ASN PHE LYS ASP ASP GLN SEQRES 6 B 134 SER ILE GLN LYS SER VAL GLU THR ILE LYS GLU ASP MET SEQRES 7 B 134 ASN VAL LYS PHE PHE ASN SER ASN LYS LYS LYS ARG ASP SEQRES 8 B 134 ASP PHE GLU LYS LEU THR ASN TYR SER VAL THR ASP LEU SEQRES 9 B 134 ASN VAL GLN ARG LYS ALA ILE HIS GLU LEU ILE GLN VAL SEQRES 10 B 134 MET ALA GLU LEU SER PRO ALA ALA LYS THR GLY LYS ARG SEQRES 11 B 134 LYS ARG SER GLN SEQRES 1 C 245 GLU MET GLY THR ALA ASP LEU GLY PRO SER SER VAL PRO SEQRES 2 C 245 THR PRO THR ASN VAL THR ILE GLU SER TYR ASN MET ASN SEQRES 3 C 245 PRO ILE VAL TYR TRP GLU TYR GLN ILE MET PRO GLN VAL SEQRES 4 C 245 PRO VAL PHE THR VAL GLU VAL LYS ASN TYR GLY VAL LYS SEQRES 5 C 245 ASN SER GLU TRP ILE ASP ALA CYS ILE ASN ILE SER HIS SEQRES 6 C 245 HIS TYR CYS ASN ILE SER ASP HIS VAL GLY ASP PRO SER SEQRES 7 C 245 ASN SER LEU TRP VAL ARG VAL LYS ALA ARG VAL GLY GLN SEQRES 8 C 245 LYS GLU SER ALA TYR ALA LYS SER GLU GLU PHE ALA VAL SEQRES 9 C 245 CYS ARG ASP GLY LYS ILE GLY PRO PRO LYS LEU ASP ILE SEQRES 10 C 245 ARG LYS GLU GLU LYS GLN ILE MET ILE ASP ILE PHE HIS SEQRES 11 C 245 PRO SER VAL PHE VAL ASN GLY ASP GLU GLN GLU VAL ASP SEQRES 12 C 245 TYR ASP PRO GLU THR THR CYS TYR ILE ARG VAL TYR ASN SEQRES 13 C 245 VAL TYR VAL ARG MET ASN GLY SER GLU ILE GLN TYR LYS SEQRES 14 C 245 ILE LEU THR GLN LYS GLU ASP ASP CYS ASP GLU ILE GLN SEQRES 15 C 245 CYS GLN LEU ALA ILE PRO VAL SER SER LEU ASN SER GLN SEQRES 16 C 245 TYR CYS VAL SER ALA GLU GLY VAL LEU HIS VAL TRP GLY SEQRES 17 C 245 VAL THR THR GLU LYS SER LYS GLU VAL CYS ILE THR ILE SEQRES 18 C 245 PHE ASN SER SER ILE LYS GLY SER LEU TRP ILE PRO VAL SEQRES 19 C 245 VAL ALA ALA LEU LEU LEU PHE LEU VAL LEU SER SEQRES 1 D 245 GLU MET GLY THR ALA ASP LEU GLY PRO SER SER VAL PRO SEQRES 2 D 245 THR PRO THR ASN VAL THR ILE GLU SER TYR ASN MET ASN SEQRES 3 D 245 PRO ILE VAL TYR TRP GLU TYR GLN ILE MET PRO GLN VAL SEQRES 4 D 245 PRO VAL PHE THR VAL GLU VAL LYS ASN TYR GLY VAL LYS SEQRES 5 D 245 ASN SER GLU TRP ILE ASP ALA CYS ILE ASN ILE SER HIS SEQRES 6 D 245 HIS TYR CYS ASN ILE SER ASP HIS VAL GLY ASP PRO SER SEQRES 7 D 245 ASN SER LEU TRP VAL ARG VAL LYS ALA ARG VAL GLY GLN SEQRES 8 D 245 LYS GLU SER ALA TYR ALA LYS SER GLU GLU PHE ALA VAL SEQRES 9 D 245 CYS ARG ASP GLY LYS ILE GLY PRO PRO LYS LEU ASP ILE SEQRES 10 D 245 ARG LYS GLU GLU LYS GLN ILE MET ILE ASP ILE PHE HIS SEQRES 11 D 245 PRO SER VAL PHE VAL ASN GLY ASP GLU GLN GLU VAL ASP SEQRES 12 D 245 TYR ASP PRO GLU THR THR CYS TYR ILE ARG VAL TYR ASN SEQRES 13 D 245 VAL TYR VAL ARG MET ASN GLY SER GLU ILE GLN TYR LYS SEQRES 14 D 245 ILE LEU THR GLN LYS GLU ASP ASP CYS ASP GLU ILE GLN SEQRES 15 D 245 CYS GLN LEU ALA ILE PRO VAL SER SER LEU ASN SER GLN SEQRES 16 D 245 TYR CYS VAL SER ALA GLU GLY VAL LEU HIS VAL TRP GLY SEQRES 17 D 245 VAL THR THR GLU LYS SER LYS GLU VAL CYS ILE THR ILE SEQRES 18 D 245 PHE ASN SER SER ILE LYS GLY SER LEU TRP ILE PRO VAL SEQRES 19 D 245 VAL ALA ALA LEU LEU LEU PHE LEU VAL LEU SER SEQRES 1 E 245 GLU MET GLY THR ALA ASP LEU GLY PRO SER SER VAL PRO SEQRES 2 E 245 THR PRO THR ASN VAL THR ILE GLU SER TYR ASN MET ASN SEQRES 3 E 245 PRO ILE VAL TYR TRP GLU TYR GLN ILE MET PRO GLN VAL SEQRES 4 E 245 PRO VAL PHE THR VAL GLU VAL LYS ASN TYR GLY VAL LYS SEQRES 5 E 245 ASN SER GLU TRP ILE ASP ALA CYS ILE ASN ILE SER HIS SEQRES 6 E 245 HIS TYR CYS ASN ILE SER ASP HIS VAL GLY ASP PRO SER SEQRES 7 E 245 ASN SER LEU TRP VAL ARG VAL LYS ALA ARG VAL GLY GLN SEQRES 8 E 245 LYS GLU SER ALA TYR ALA LYS SER GLU GLU PHE ALA VAL SEQRES 9 E 245 CYS ARG ASP GLY LYS ILE GLY PRO PRO LYS LEU ASP ILE SEQRES 10 E 245 ARG LYS GLU GLU LYS GLN ILE MET ILE ASP ILE PHE HIS SEQRES 11 E 245 PRO SER VAL PHE VAL ASN GLY ASP GLU GLN GLU VAL ASP SEQRES 12 E 245 TYR ASP PRO GLU THR THR CYS TYR ILE ARG VAL TYR ASN SEQRES 13 E 245 VAL TYR VAL ARG MET ASN GLY SER GLU ILE GLN TYR LYS SEQRES 14 E 245 ILE LEU THR GLN LYS GLU ASP ASP CYS ASP GLU ILE GLN SEQRES 15 E 245 CYS GLN LEU ALA ILE PRO VAL SER SER LEU ASN SER GLN SEQRES 16 E 245 TYR CYS VAL SER ALA GLU GLY VAL LEU HIS VAL TRP GLY SEQRES 17 E 245 VAL THR THR GLU LYS SER LYS GLU VAL CYS ILE THR ILE SEQRES 18 E 245 PHE ASN SER SER ILE LYS GLY SER LEU TRP ILE PRO VAL SEQRES 19 E 245 VAL ALA ALA LEU LEU LEU PHE LEU VAL LEU SER HELIX 1 1 ASP A 2 PHE A 15 1 14 HELIX 2 2 HIS A 19 ASP A 24 5 6 HELIX 3 3 GLY A 31 TRP A 36 5 6 HELIX 4 4 GLU A 38 ASN A 59 1 22 HELIX 5 5 ASP A 63 SER A 65 5 3 HELIX 6 6 ILE A 66 PHE A 82 1 17 HELIX 7 7 ASN A 85 ASN A 97 1 13 HELIX 8 8 ASN A 104 GLU A 112 1 9 HELIX 9 9 GLU A 112 ALA A 118 1 7 HELIX 10 10 ASP B 2 ASN B 16 1 15 HELIX 11 11 HIS B 19 ASP B 24 5 6 HELIX 12 12 GLY B 31 TRP B 36 5 6 HELIX 13 13 GLU B 38 ASN B 59 1 22 HELIX 14 14 ILE B 66 PHE B 82 1 17 HELIX 15 15 ASN B 85 ASN B 97 1 13 HELIX 16 16 ASN B 104 GLU B 112 1 9 HELIX 17 17 GLU B 112 ALA B 118 1 7 HELIX 18 18 SER C 71 VAL C 74 5 4 HELIX 19 19 ALA C 103 GLY C 108 1 6 HELIX 20 20 SER D 71 VAL D 74 5 4 HELIX 21 21 ALA D 103 GLY D 108 1 6 HELIX 22 22 SER E 71 VAL E 74 5 4 SHEET 1 A 3 THR C 16 THR C 19 0 SHEET 2 A 3 ILE C 28 GLU C 32 -1 N TYR C 30 O THR C 19 SHEET 3 A 3 TYR C 67 ASN C 69 -1 O CYS C 68 N VAL C 29 SHEET 1 B 4 ILE C 57 ILE C 63 0 SHEET 2 B 4 VAL C 41 ASN C 48 -1 O PHE C 42 N ILE C 63 SHEET 3 B 4 LEU C 81 ARG C 88 -1 N TRP C 82 O LYS C 47 SHEET 4 B 4 ALA C 97 LYS C 98 -1 N ALA C 97 O VAL C 85 SHEET 1 C 2 LYS C 114 ILE C 117 0 SHEET 2 C 2 ILE C 126 PHE C 129 -1 N ASP C 127 O ASP C 116 SHEET 1 D 2 GLN C 123 ILE C 124 0 SHEET 2 D 2 ILE C 187 PRO C 188 -1 N ILE C 187 O ILE C 124 SHEET 1 E 8 VAL C 217 ILE C 219 0 SHEET 2 E 8 TYR C 196 LEU C 204 -1 N TYR C 196 O ILE C 219 SHEET 3 E 8 ILE C 152 MET C 161 -1 N ARG C 153 O VAL C 203 SHEET 4 E 8 SER C 164 TYR C 168 -1 O SER C 164 N MET C 161 SHEET 5 E 8 GLU E 216 CYS E 218 1 O GLU E 216 N GLN C 167 SHEET 6 E 8 CYS E 197 LEU E 204 -1 O VAL E 198 N VAL E 217 SHEET 7 E 8 ILE E 152 MET E 161 -1 N ARG E 153 O VAL E 203 SHEET 8 E 8 SER E 164 LEU E 171 -1 N SER E 164 O MET E 161 SHEET 1 F 3 THR D 16 SER D 22 0 SHEET 2 F 3 PRO D 27 GLU D 32 -1 N ILE D 28 O GLU D 21 SHEET 3 F 3 TYR D 67 ASN D 69 -1 O CYS D 68 N VAL D 29 SHEET 1 G 4 ILE D 57 ILE D 63 0 SHEET 2 G 4 VAL D 41 ASN D 48 -1 O PHE D 42 N ILE D 63 SHEET 3 G 4 LEU D 81 VAL D 89 -1 N TRP D 82 O LYS D 47 SHEET 4 G 4 LYS D 92 GLU D 93 -1 N LYS D 92 O VAL D 89 SHEET 1 H 4 ILE D 57 ILE D 63 0 SHEET 2 H 4 VAL D 41 ASN D 48 -1 O PHE D 42 N ILE D 63 SHEET 3 H 4 LEU D 81 VAL D 89 -1 N TRP D 82 O LYS D 47 SHEET 4 H 4 ALA D 97 LYS D 98 -1 N ALA D 97 O VAL D 85 SHEET 1 I 2 LYS D 114 ILE D 117 0 SHEET 2 I 2 ILE D 126 PHE D 129 -1 N ASP D 127 O ASP D 116 SHEET 1 J 2 GLN D 123 ILE D 124 0 SHEET 2 J 2 ILE D 187 PRO D 188 -1 O ILE D 187 N ILE D 124 SHEET 1 K 4 SER D 164 TYR D 168 0 SHEET 2 K 4 ILE D 152 MET D 161 -1 N VAL D 157 O TYR D 168 SHEET 3 K 4 TYR D 196 LEU D 204 -1 N CYS D 197 O ARG D 160 SHEET 4 K 4 VAL D 217 ILE D 219 -1 N VAL D 217 O VAL D 198 SHEET 1 L 3 THR E 16 SER E 22 0 SHEET 2 L 3 PRO E 27 GLU E 32 -1 N ILE E 28 O GLU E 21 SHEET 3 L 3 TYR E 67 ASN E 69 -1 O CYS E 68 N VAL E 29 SHEET 1 M 4 ILE E 57 ILE E 63 0 SHEET 2 M 4 VAL E 41 ASN E 48 -1 O PHE E 42 N ILE E 63 SHEET 3 M 4 LEU E 81 VAL E 89 -1 N TRP E 82 O LYS E 47 SHEET 4 M 4 LYS E 92 GLU E 93 -1 N LYS E 92 O VAL E 89 SHEET 1 N 3 LYS E 114 ILE E 117 0 SHEET 2 N 3 GLN E 123 PHE E 129 -1 N ASP E 127 O ASP E 116 SHEET 3 N 3 ALA E 186 PRO E 188 -1 O ILE E 187 N ILE E 124 SSBOND 1 CYS C 60 CYS C 68 1555 1555 2.03 SSBOND 2 CYS C 105 CYS C 150 1555 1555 2.08 SSBOND 3 CYS C 178 CYS C 183 1555 1555 2.04 SSBOND 4 CYS C 197 CYS C 218 1555 1555 2.07 SSBOND 5 CYS D 60 CYS D 68 1555 1555 2.03 SSBOND 6 CYS D 105 CYS D 150 1555 1555 2.02 SSBOND 7 CYS D 178 CYS D 183 1555 1555 2.03 SSBOND 8 CYS D 197 CYS D 218 1555 1555 2.07 SSBOND 9 CYS E 60 CYS E 68 1555 1555 2.04 SSBOND 10 CYS E 105 CYS E 150 1555 1555 2.04 SSBOND 11 CYS E 178 CYS E 183 1555 1555 2.03 SSBOND 12 CYS E 197 CYS E 218 1555 1555 2.05 CRYST1 199.300 114.650 74.340 90.00 116.27 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005018 0.000000 0.002477 0.00000 SCALE2 0.000000 0.008722 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015001 0.00000