HEADER VIRAL PROTEIN 10-DEC-96 1FGP TITLE MEMBRANE PENETRATION DOMAIN OF THE MINOR COAT PROTEIN G3P OF PHAGE FD, TITLE 2 NMR, 15 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: FD GENE 3 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; SOURCE 3 ORGANISM_TAXID: 10864; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_CELLULAR_LOCATION: SUPERNATANT; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PUC119 KEYWDS PHAGE COAT PROTEIN, SH3 DOMAIN, PH DOMAIN, PDZ DOMAIN, FD PHAGE, KEYWDS 2 FILAMENTOUS PAHGE, PHAGE INFECTION, PTB DOMAIN, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR P.HOLLIGER,L.RIECHMANN REVDAT 3 23-FEB-22 1FGP 1 REMARK REVDAT 2 24-FEB-09 1FGP 1 VERSN REVDAT 1 16-JUN-97 1FGP 0 JRNL AUTH P.HOLLIGER,L.RIECHMANN JRNL TITL A CONSERVED INFECTION PATHWAY FOR FILAMENTOUS BACTERIOPHAGES JRNL TITL 2 IS SUGGESTED BY THE STRUCTURE OF THE MEMBRANE PENETRATION JRNL TITL 3 DOMAIN OF THE MINOR COAT PROTEIN G3P FROM PHAGE FD. JRNL REF STRUCTURE V. 5 265 1997 JRNL REFN ISSN 0969-2126 JRNL PMID 9032075 JRNL DOI 10.1016/S0969-2126(97)00184-6 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SEE JRNL REFERENCE. REMARK 4 REMARK 4 1FGP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173282. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N + 13C NOESY-HMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX500 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST TOTAL ENERGIES REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 9 179.90 -46.66 REMARK 500 1 HIS A 11 81.40 69.17 REMARK 500 1 THR A 12 -59.34 86.00 REMARK 500 1 GLU A 13 97.08 -44.84 REMARK 500 1 ASN A 14 -149.52 168.53 REMARK 500 1 SER A 15 -173.12 178.83 REMARK 500 1 VAL A 19 156.42 -46.96 REMARK 500 1 LEU A 26 58.97 70.90 REMARK 500 1 ASP A 27 176.77 170.94 REMARK 500 1 GLU A 33 95.59 35.42 REMARK 500 1 THR A 40 -91.53 -101.77 REMARK 500 1 VAL A 42 89.14 -50.96 REMARK 500 1 ILE A 59 -32.49 -154.95 REMARK 500 1 ALA A 62 43.89 173.11 REMARK 500 1 ILE A 63 -36.26 163.15 REMARK 500 1 GLU A 65 -156.61 -72.20 REMARK 500 1 ALA A 68 47.49 75.62 REMARK 500 2 THR A 2 124.56 67.44 REMARK 500 2 LYS A 9 -179.76 -46.92 REMARK 500 2 HIS A 11 81.24 71.60 REMARK 500 2 THR A 12 -59.53 86.14 REMARK 500 2 GLU A 13 98.94 -44.88 REMARK 500 2 ASN A 14 -158.02 167.44 REMARK 500 2 ASN A 18 18.84 58.32 REMARK 500 2 VAL A 19 153.70 -41.94 REMARK 500 2 LEU A 26 62.02 71.08 REMARK 500 2 ASP A 27 170.89 167.37 REMARK 500 2 GLU A 33 93.02 34.67 REMARK 500 2 THR A 40 -150.43 -86.12 REMARK 500 2 GLU A 49 28.18 81.73 REMARK 500 2 ILE A 59 -32.85 -159.34 REMARK 500 2 ALA A 62 52.59 171.45 REMARK 500 2 ILE A 63 -41.55 158.39 REMARK 500 2 GLU A 65 -154.19 -82.64 REMARK 500 2 ASN A 66 49.89 -91.54 REMARK 500 2 ALA A 67 110.30 179.26 REMARK 500 2 ALA A 68 99.45 -43.25 REMARK 500 3 THR A 2 98.41 57.28 REMARK 500 3 LYS A 9 -178.64 -46.01 REMARK 500 3 HIS A 11 81.89 71.68 REMARK 500 3 THR A 12 -59.53 84.89 REMARK 500 3 GLU A 13 98.95 -44.86 REMARK 500 3 ASN A 14 -154.84 165.44 REMARK 500 3 SER A 15 -170.06 -178.65 REMARK 500 3 VAL A 19 151.21 -48.34 REMARK 500 3 LEU A 26 59.28 70.50 REMARK 500 3 ASP A 27 174.72 168.54 REMARK 500 3 GLU A 33 88.78 35.54 REMARK 500 3 VAL A 43 -167.75 -116.01 REMARK 500 3 ILE A 59 -29.79 -150.20 REMARK 500 REMARK 500 THIS ENTRY HAS 277 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 28 0.31 SIDE CHAIN REMARK 500 2 ARG A 28 0.22 SIDE CHAIN REMARK 500 3 ARG A 28 0.29 SIDE CHAIN REMARK 500 4 ARG A 28 0.31 SIDE CHAIN REMARK 500 5 ARG A 28 0.18 SIDE CHAIN REMARK 500 6 ARG A 28 0.31 SIDE CHAIN REMARK 500 7 ARG A 28 0.14 SIDE CHAIN REMARK 500 8 ARG A 28 0.17 SIDE CHAIN REMARK 500 9 ARG A 28 0.23 SIDE CHAIN REMARK 500 10 ARG A 28 0.23 SIDE CHAIN REMARK 500 11 ARG A 28 0.31 SIDE CHAIN REMARK 500 12 ARG A 28 0.20 SIDE CHAIN REMARK 500 13 ARG A 28 0.28 SIDE CHAIN REMARK 500 14 ARG A 28 0.14 SIDE CHAIN REMARK 500 15 ARG A 28 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1FGP A 1 66 UNP P03661 COATA_BPFD 20 85 SEQRES 1 A 70 GLU THR VAL GLU SER CYS LEU ALA LYS PRO HIS THR GLU SEQRES 2 A 70 ASN SER PHE THR ASN VAL TRP LYS ASP ASP LYS THR LEU SEQRES 3 A 70 ASP ARG TYR ALA ASN TYR GLU GLY CYS LEU TRP ASN ALA SEQRES 4 A 70 THR GLY VAL VAL VAL CYS THR GLY ASP GLU THR GLN CYS SEQRES 5 A 70 TYR GLY THR TRP VAL PRO ILE GLY LEU ALA ILE PRO GLU SEQRES 6 A 70 ASN ALA ALA ALA HIS HELIX 1 1 VAL A 3 ALA A 8 1 6 SHEET 1 A 3 THR A 12 PHE A 16 0 SHEET 2 A 3 GLN A 51 TRP A 56 -1 N TRP A 56 O THR A 12 SHEET 3 A 3 VAL A 43 THR A 46 -1 N THR A 46 O GLN A 51 SHEET 1 B 4 TRP A 20 ASP A 22 0 SHEET 2 B 4 ASP A 27 TYR A 32 -1 N TYR A 29 O TRP A 20 SHEET 3 B 4 CYS A 35 ALA A 39 -1 N ALA A 39 O ARG A 28 SHEET 4 B 4 TRP A 56 GLY A 60 -1 N GLY A 60 O LEU A 36 SSBOND 1 CYS A 6 CYS A 35 1555 1555 2.02 SSBOND 2 CYS A 45 CYS A 52 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1