HEADER HYDROLASE/HYDROLASE INHIBITOR 03-AUG-00 1FI8 TITLE RAT GRANZYME B [N66Q] COMPLEXED TO ECOTIN [81-84 IEPD] COMPND MOL_ID: 1; COMPND 2 MOLECULE: NATURAL KILLER CELL PROTEASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GRANZYME B; COMPND 5 EC: 3.4.21.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ECOTIN; COMPND 10 CHAIN: C, E; COMPND 11 FRAGMENT: RESIDUES 28 - 111; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: ECOTIN; COMPND 16 CHAIN: D, F; COMPND 17 FRAGMENT: RESIDUES 112 - 169; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PPICZAA; SOURCE 9 OTHER_DETAILS: CYTOTOXIC LYMPHOCYTE GRANULES; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PTACTAC; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 19 ORGANISM_TAXID: 562; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 23 EXPRESSION_SYSTEM_PLASMID: PTACTAC KEYWDS COMPLEX (SERINE PROTEASE-INHIBITOR), PROTEASE SUBSTRATE INTERACTIONS, KEYWDS 2 BETA STRAND STRUCTURE, CHYMOTRYPSIN FOLD, GRANZYME B, ECOTIN, KEYWDS 3 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.M.WAUGH,J.L.HARRIS,R.J.FLETTERICK,C.S.CRAIK REVDAT 4 03-NOV-21 1FI8 1 SEQADV REVDAT 3 24-FEB-09 1FI8 1 VERSN REVDAT 2 01-APR-03 1FI8 1 JRNL REVDAT 1 13-SEP-00 1FI8 0 JRNL AUTH S.M.WAUGH,J.L.HARRIS,R.FLETTERICK,C.S.CRAIK JRNL TITL THE STRUCTURE OF THE PRO-APOPTOTIC PROTEASE GRANZYME B JRNL TITL 2 REVEALS THE MOLECULAR DETERMINANTS OF ITS SPECIFICITY JRNL REF NAT.STRUCT.BIOL. V. 7 762 2000 JRNL REFN ISSN 1072-8368 JRNL PMID 10966646 JRNL DOI 10.1038/78992 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 25137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : 5% OF OBSERVED REFLECTIONS REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1305 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.49 REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.50 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.350 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.860 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CRYSTAL 1 DATA WAS USED FOR INITIAL REMARK 3 MOLECULAR REPLACEMENT AND REFINEMENT. CRYSTAL 2 DATA WAS GIVEN REMARK 3 THE SAME RFREE SET AND USED FOR FINAL REFINEMENT. MOLECULAR REMARK 3 REPLACEMENT USED 1AZZ AND 1AUG. REMARK 4 REMARK 4 1FI8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-00. REMARK 100 THE DEPOSITION ID IS D_1000011614. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-99; 23-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 85; 85 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL9-1; BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.08; 1.08 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98218 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 35.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, PEGMME 2000, AMMONIUM REMARK 280 ACETATE,, PH 4.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 77.30000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE TETRAMER IN THE ASYMMETRIC REMARK 300 UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 38 REMARK 465 SER A 245 REMARK 465 ALA C 1 REMARK 465 GLU C 2 REMARK 465 SER C 3 REMARK 465 VAL C 4 REMARK 465 GLN C 5 REMARK 465 ASN C 51 REMARK 465 MET D 85 REMARK 465 ALA D 86 REMARK 465 CYS D 87 REMARK 465 PRO D 88 REMARK 465 ASP D 89 REMARK 465 GLY D 90 REMARK 465 LYS D 91 REMARK 465 LYS D 92 REMARK 465 GLU D 93 REMARK 465 LYS D 94 REMARK 465 SER B 245 REMARK 465 ALA E 1 REMARK 465 GLU E 2 REMARK 465 SER E 3 REMARK 465 VAL E 4 REMARK 465 GLN E 5 REMARK 465 ASN E 51 REMARK 465 LYS E 76 REMARK 465 VAL E 77 REMARK 465 MET F 85 REMARK 465 ALA F 86 REMARK 465 CYS F 87 REMARK 465 PRO F 88 REMARK 465 ASP F 89 REMARK 465 GLY F 90 REMARK 465 LYS F 91 REMARK 465 LYS F 92 REMARK 465 GLU F 93 REMARK 465 LYS F 94 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 36A CG OD1 OD2 REMARK 470 TYR A 37 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 37A OG REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 127 CG OD1 ND2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 LYS A 188A CG CD CE NZ REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 LYS A 244 CG CD CE NZ REMARK 470 LYS C 9 CG CD CE NZ REMARK 470 LYS C 18 CG CD CE NZ REMARK 470 GLU C 31 CG CD OE1 OE2 REMARK 470 GLU C 47 CG CD OE1 OE2 REMARK 470 LYS C 58 CG CD CE NZ REMARK 470 GLU C 60 CG CD OE1 OE2 REMARK 470 GLU C 65 CG CD OE1 OE2 REMARK 470 LYS C 76 CG CD CE NZ REMARK 470 LYS D 95 CG CD CE NZ REMARK 470 GLU D 134 CG CD OE1 OE2 REMARK 470 LYS D 135 CG CD CE NZ REMARK 470 ASP B 36A CG OD1 OD2 REMARK 470 GLU B 36B CG CD OE1 OE2 REMARK 470 TYR B 37 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 37A OG REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LYS B 87 CG CD CE NZ REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 LYS B 113 CG CD CE NZ REMARK 470 ARG B 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 ARG B 126 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 127 CG OD1 ND2 REMARK 470 LYS B 129 CG CD CE NZ REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 LYS B 188A CG CD CE NZ REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 LYS B 239 CG CD CE NZ REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 LYS E 9 CG CD CE NZ REMARK 470 LYS E 18 CG CD CE NZ REMARK 470 GLU E 31 CG CD OE1 OE2 REMARK 470 GLU E 47 CG CD OE1 OE2 REMARK 470 LYS E 58 CG CD CE NZ REMARK 470 GLU E 60 CG CD OE1 OE2 REMARK 470 GLU E 65 CG CD OE1 OE2 REMARK 470 LYS F 95 CG CD CE NZ REMARK 470 GLU F 134 CG CD OE1 OE2 REMARK 470 LYS F 135 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 195 O ASP E 84 1.72 REMARK 500 OG SER A 195 O ASP C 84 1.75 REMARK 500 OG SER B 195 C ASP E 84 1.83 REMARK 500 OG SER A 195 C ASP C 84 1.88 REMARK 500 O ASP A 36A N SER A 37A 1.98 REMARK 500 O HOH D 151 O HOH F 150 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 36B CB - CA - C ANGL. DEV. = 12.0 DEGREES REMARK 500 GLU A 36B N - CA - CB ANGL. DEV. = -28.1 DEGREES REMARK 500 GLU A 36B CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 GLU A 36B CG - CD - OE1 ANGL. DEV. = 15.8 DEGREES REMARK 500 GLU A 36B CG - CD - OE2 ANGL. DEV. = -16.6 DEGREES REMARK 500 TYR A 37 CB - CA - C ANGL. DEV. = -28.4 DEGREES REMARK 500 TYR A 37 N - CA - CB ANGL. DEV. = 21.4 DEGREES REMARK 500 SER A 37A N - CA - CB ANGL. DEV. = -15.4 DEGREES REMARK 500 ARG A 48 CD - NE - CZ ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 48 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 48 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ARG B 48 CD - NE - CZ ANGL. DEV. = 10.7 DEGREES REMARK 500 ARG B 48 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG B 48 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36B -39.94 -25.42 REMARK 500 GLU A 49 -28.92 -38.13 REMARK 500 HIS A 71 -57.92 -134.06 REMARK 500 LYS A 172 109.76 -26.80 REMARK 500 TYR A 174 -40.17 -149.42 REMARK 500 LYS A 177 -19.36 -46.62 REMARK 500 ALA A 189 167.23 179.48 REMARK 500 ASP C 49 59.68 -98.07 REMARK 500 ASP C 75 -154.06 -148.65 REMARK 500 ASP B 36A -102.67 -167.02 REMARK 500 GLU B 36B -50.12 -176.19 REMARK 500 GLU B 49 -28.90 -38.58 REMARK 500 HIS B 71 -58.27 -133.82 REMARK 500 LYS B 172 110.09 -27.41 REMARK 500 TYR B 174 -40.26 -149.16 REMARK 500 LYS B 177 -19.55 -46.71 REMARK 500 ALA B 189 166.73 179.95 REMARK 500 ASP E 49 -125.20 -67.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 1FI8 A 16 245 UNP P18291 NKP1_RAT 21 248 DBREF 1FI8 C 6 84 UNP P23827 ECOT_ECOLI 21 100 DBREF 1FI8 D 85 142 UNP P23827 ECOT_ECOLI 105 162 DBREF 1FI8 B 16 245 UNP P18291 NKP1_RAT 21 248 DBREF 1FI8 E 6 84 UNP P23827 ECOT_ECOLI 21 100 DBREF 1FI8 F 85 142 UNP P23827 ECOT_ECOLI 105 162 SEQADV 1FI8 GLN A 66 UNP P18291 ASN 72 ENGINEERED MUTATION SEQADV 1FI8 GLN B 66 UNP P18291 ASN 72 ENGINEERED MUTATION SEQADV 1FI8 ILE C 81 UNP P23827 VAL 108 ENGINEERED MUTATION SEQADV 1FI8 GLU C 82 UNP P23827 SER 109 ENGINEERED MUTATION SEQADV 1FI8 PRO C 83 UNP P23827 THR 110 ENGINEERED MUTATION SEQADV 1FI8 ASP C 84 UNP P23827 MET 111 ENGINEERED MUTATION SEQADV 1FI8 ILE E 81 UNP P23827 VAL 108 ENGINEERED MUTATION SEQADV 1FI8 GLU E 82 UNP P23827 SER 109 ENGINEERED MUTATION SEQADV 1FI8 PRO E 83 UNP P23827 THR 110 ENGINEERED MUTATION SEQADV 1FI8 ASP E 84 UNP P23827 MET 111 ENGINEERED MUTATION SEQRES 1 A 228 ILE ILE GLY GLY HIS GLU ALA LYS PRO HIS SER ARG PRO SEQRES 2 A 228 TYR MET ALA TYR LEU GLN ILE MET ASP GLU TYR SER GLY SEQRES 3 A 228 SER LYS LYS CYS GLY GLY PHE LEU ILE ARG GLU ASP PHE SEQRES 4 A 228 VAL LEU THR ALA ALA HIS CYS SER GLY SER LYS ILE GLN SEQRES 5 A 228 VAL THR LEU GLY ALA HIS ASN ILE LYS GLU GLN GLU LYS SEQRES 6 A 228 MET GLN GLN ILE ILE PRO VAL VAL LYS ILE ILE PRO HIS SEQRES 7 A 228 PRO ALA TYR ASN SER LYS THR ILE SER ASN ASP ILE MET SEQRES 8 A 228 LEU LEU LYS LEU LYS SER LYS ALA LYS ARG SER SER ALA SEQRES 9 A 228 VAL LYS PRO LEU ASN LEU PRO ARG ARG ASN VAL LYS VAL SEQRES 10 A 228 LYS PRO GLY ASP VAL CYS TYR VAL ALA GLY TRP GLY LYS SEQRES 11 A 228 LEU GLY PRO MET GLY LYS TYR SER ASP THR LEU GLN GLU SEQRES 12 A 228 VAL GLU LEU THR VAL GLN GLU ASP GLN LYS CYS GLU SER SEQRES 13 A 228 TYR LEU LYS ASN TYR PHE ASP LYS ALA ASN GLU ILE CYS SEQRES 14 A 228 ALA GLY ASP PRO LYS ILE LYS ARG ALA SER PHE ARG GLY SEQRES 15 A 228 ASP SER GLY GLY PRO LEU VAL CYS LYS LYS VAL ALA ALA SEQRES 16 A 228 GLY ILE VAL SER TYR GLY GLN ASN ASP GLY SER THR PRO SEQRES 17 A 228 ARG ALA PHE THR LYS VAL SER THR PHE LEU SER TRP ILE SEQRES 18 A 228 LYS LYS THR MET LYS LYS SER SEQRES 1 C 84 ALA GLU SER VAL GLN PRO LEU GLU LYS ILE ALA PRO TYR SEQRES 2 C 84 PRO GLN ALA GLU LYS GLY MET LYS ARG GLN VAL ILE GLN SEQRES 3 C 84 LEU THR PRO GLN GLU ASP GLU SER THR LEU LYS VAL GLU SEQRES 4 C 84 LEU LEU ILE GLY GLN THR LEU GLU VAL ASP CYS ASN LEU SEQRES 5 C 84 HIS ARG LEU GLY GLY LYS LEU GLU ASN LYS THR LEU GLU SEQRES 6 C 84 GLY TRP GLY TYR ASP TYR TYR VAL PHE ASP LYS VAL SER SEQRES 7 C 84 SER PRO ILE GLU PRO ASP SEQRES 1 D 58 MET ALA CYS PRO ASP GLY LYS LYS GLU LYS LYS PHE VAL SEQRES 2 D 58 THR ALA TYR LEU GLY ASP ALA GLY MET LEU ARG TYR ASN SEQRES 3 D 58 SER LYS LEU PRO ILE VAL VAL TYR THR PRO ASP ASN VAL SEQRES 4 D 58 ASP VAL LYS TYR ARG VAL TRP LYS ALA GLU GLU LYS ILE SEQRES 5 D 58 ASP ASN ALA VAL VAL ARG SEQRES 1 B 228 ILE ILE GLY GLY HIS GLU ALA LYS PRO HIS SER ARG PRO SEQRES 2 B 228 TYR MET ALA TYR LEU GLN ILE MET ASP GLU TYR SER GLY SEQRES 3 B 228 SER LYS LYS CYS GLY GLY PHE LEU ILE ARG GLU ASP PHE SEQRES 4 B 228 VAL LEU THR ALA ALA HIS CYS SER GLY SER LYS ILE GLN SEQRES 5 B 228 VAL THR LEU GLY ALA HIS ASN ILE LYS GLU GLN GLU LYS SEQRES 6 B 228 MET GLN GLN ILE ILE PRO VAL VAL LYS ILE ILE PRO HIS SEQRES 7 B 228 PRO ALA TYR ASN SER LYS THR ILE SER ASN ASP ILE MET SEQRES 8 B 228 LEU LEU LYS LEU LYS SER LYS ALA LYS ARG SER SER ALA SEQRES 9 B 228 VAL LYS PRO LEU ASN LEU PRO ARG ARG ASN VAL LYS VAL SEQRES 10 B 228 LYS PRO GLY ASP VAL CYS TYR VAL ALA GLY TRP GLY LYS SEQRES 11 B 228 LEU GLY PRO MET GLY LYS TYR SER ASP THR LEU GLN GLU SEQRES 12 B 228 VAL GLU LEU THR VAL GLN GLU ASP GLN LYS CYS GLU SER SEQRES 13 B 228 TYR LEU LYS ASN TYR PHE ASP LYS ALA ASN GLU ILE CYS SEQRES 14 B 228 ALA GLY ASP PRO LYS ILE LYS ARG ALA SER PHE ARG GLY SEQRES 15 B 228 ASP SER GLY GLY PRO LEU VAL CYS LYS LYS VAL ALA ALA SEQRES 16 B 228 GLY ILE VAL SER TYR GLY GLN ASN ASP GLY SER THR PRO SEQRES 17 B 228 ARG ALA PHE THR LYS VAL SER THR PHE LEU SER TRP ILE SEQRES 18 B 228 LYS LYS THR MET LYS LYS SER SEQRES 1 E 84 ALA GLU SER VAL GLN PRO LEU GLU LYS ILE ALA PRO TYR SEQRES 2 E 84 PRO GLN ALA GLU LYS GLY MET LYS ARG GLN VAL ILE GLN SEQRES 3 E 84 LEU THR PRO GLN GLU ASP GLU SER THR LEU LYS VAL GLU SEQRES 4 E 84 LEU LEU ILE GLY GLN THR LEU GLU VAL ASP CYS ASN LEU SEQRES 5 E 84 HIS ARG LEU GLY GLY LYS LEU GLU ASN LYS THR LEU GLU SEQRES 6 E 84 GLY TRP GLY TYR ASP TYR TYR VAL PHE ASP LYS VAL SER SEQRES 7 E 84 SER PRO ILE GLU PRO ASP SEQRES 1 F 58 MET ALA CYS PRO ASP GLY LYS LYS GLU LYS LYS PHE VAL SEQRES 2 F 58 THR ALA TYR LEU GLY ASP ALA GLY MET LEU ARG TYR ASN SEQRES 3 F 58 SER LYS LEU PRO ILE VAL VAL TYR THR PRO ASP ASN VAL SEQRES 4 F 58 ASP VAL LYS TYR ARG VAL TRP LYS ALA GLU GLU LYS ILE SEQRES 5 F 58 ASP ASN ALA VAL VAL ARG FORMUL 7 HOH *370(H2 O) HELIX 1 1 ALA A 55 SER A 59 5 5 HELIX 2 2 GLU A 164 LEU A 171 1 9 HELIX 3 3 PHE A 234 LYS A 243 1 10 HELIX 4 4 PRO C 6 ILE C 10 5 5 HELIX 5 5 ASP C 32 SER C 34 5 3 HELIX 6 6 LEU D 101 ALA D 104 5 4 HELIX 7 7 ALA B 55 SER B 59 5 5 HELIX 8 8 GLU B 164 LEU B 171 1 9 HELIX 9 9 PHE B 234 LYS B 243 1 10 HELIX 10 10 PRO E 6 ILE E 10 5 5 HELIX 11 11 ASP E 32 SER E 34 5 3 HELIX 12 12 LEU F 101 ALA F 104 5 4 SHEET 1 A 9 HIS A 20 GLU A 21 0 SHEET 2 A 9 GLN A 156 THR A 161 -1 N GLU A 157 O HIS A 20 SHEET 3 A 9 VAL A 135 GLY A 140 -1 O CYS A 136 N LEU A 160 SHEET 4 A 9 PRO A 198 CYS A 201 -1 O PRO A 198 N ALA A 139 SHEET 5 A 9 VAL A 204 GLN A 217 -1 O VAL A 204 N CYS A 201 SHEET 6 A 9 ILE C 81 PRO C 83 -1 N GLU C 82 O GLY A 216 SHEET 7 A 9 VAL A 204 GLN A 217 -1 O GLY A 216 N GLU C 82 SHEET 8 A 9 ARG A 226 LYS A 230 -1 N ALA A 227 O TYR A 215 SHEET 9 A 9 GLU A 180 ALA A 183 -1 N ILE A 181 O PHE A 228 SHEET 1 B 7 GLN A 81 PRO A 90 0 SHEET 2 B 7 LYS A 64 LEU A 68 -1 O ILE A 65 N VAL A 85 SHEET 3 B 7 MET A 30 MET A 36 -1 O TYR A 32 N THR A 67A SHEET 4 B 7 LYS A 41 ARG A 48 -1 O CYS A 42 N LEU A 33 SHEET 5 B 7 PHE A 51 THR A 54 -1 N PHE A 51 O ARG A 48 SHEET 6 B 7 MET A 104 LEU A 108 -1 O MET A 104 N THR A 54 SHEET 7 B 7 GLN A 81 PRO A 90 -1 N VAL A 86 O LYS A 107 SHEET 1 C 5 VAL F 140 VAL F 141 0 SHEET 2 C 5 MET C 20 ILE C 25 -1 N VAL C 24 O VAL F 140 SHEET 3 C 5 ILE D 115 PRO D 120 -1 O ILE D 115 N ILE C 25 SHEET 4 C 5 ASP C 70 ASP C 75 1 O TYR C 72 N TYR D 118 SHEET 5 C 5 LYS C 58 THR C 63 -1 O LYS C 58 N ASP C 75 SHEET 1 D14 MET D 106 ARG D 108 0 SHEET 2 D14 LEU C 36 THR C 45 -1 O VAL C 38 N LEU D 107 SHEET 3 D14 PHE D 96 THR D 98 -1 N VAL D 97 O GLN C 44 SHEET 4 D14 LEU C 36 THR C 45 -1 O GLN C 44 N VAL D 97 SHEET 5 D14 ASP D 124 ALA D 132 -1 N ASP D 124 O GLY C 43 SHEET 6 D14 ASP F 137 ASN F 138 -1 O ASP F 137 N TYR D 127 SHEET 7 D14 ASP D 124 ALA D 132 -1 N TYR D 127 O ASP F 137 SHEET 8 D14 ASP F 124 ALA F 132 -1 N LYS F 131 O LYS D 131 SHEET 9 D14 ASP D 137 ASN D 138 -1 O ASP D 137 N TYR F 127 SHEET 10 D14 ASP F 124 ALA F 132 -1 N TYR F 127 O ASP D 137 SHEET 11 D14 LEU E 36 THR E 45 -1 O LYS E 37 N TRP F 130 SHEET 12 D14 PHE F 96 THR F 98 -1 N VAL F 97 O GLN E 44 SHEET 13 D14 LEU E 36 THR E 45 -1 O GLN E 44 N VAL F 97 SHEET 14 D14 MET F 106 ARG F 108 -1 N LEU F 107 O VAL E 38 SHEET 1 E 5 VAL D 140 VAL D 141 0 SHEET 2 E 5 MET E 20 ILE E 25 -1 N VAL E 24 O VAL D 140 SHEET 3 E 5 ILE F 115 PRO F 120 -1 O ILE F 115 N ILE E 25 SHEET 4 E 5 ASP E 70 ASP E 75 1 O TYR E 72 N TYR F 118 SHEET 5 E 5 LYS E 58 THR E 63 -1 N LYS E 58 O ASP E 75 SHEET 1 F 9 HIS B 20 GLU B 21 0 SHEET 2 F 9 GLN B 156 THR B 161 -1 N GLU B 157 O HIS B 20 SHEET 3 F 9 VAL B 135 GLY B 140 -1 O CYS B 136 N LEU B 160 SHEET 4 F 9 PRO B 198 CYS B 201 -1 O PRO B 198 N ALA B 139 SHEET 5 F 9 VAL B 204 GLN B 217 -1 O VAL B 204 N CYS B 201 SHEET 6 F 9 ILE E 81 PRO E 83 -1 N GLU E 82 O GLY B 216 SHEET 7 F 9 VAL B 204 GLN B 217 -1 O GLY B 216 N GLU E 82 SHEET 8 F 9 ARG B 226 LYS B 230 -1 N ALA B 227 O TYR B 215 SHEET 9 F 9 GLU B 180 ALA B 183 -1 N ILE B 181 O PHE B 228 SHEET 1 G 7 GLN B 81 PRO B 90 0 SHEET 2 G 7 LYS B 64 LEU B 68 -1 O ILE B 65 N VAL B 85 SHEET 3 G 7 MET B 30 MET B 36 -1 O TYR B 32 N THR B 67A SHEET 4 G 7 SER B 39 ARG B 48 -1 O LYS B 40 N ILE B 35 SHEET 5 G 7 PHE B 51 THR B 54 -1 N PHE B 51 O ARG B 48 SHEET 6 G 7 MET B 104 LEU B 108 -1 O MET B 104 N THR B 54 SHEET 7 G 7 GLN B 81 PRO B 90 -1 N VAL B 86 O LYS B 107 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.03 SSBOND 2 CYS A 136 CYS A 201 1555 1555 2.03 SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.03 SSBOND 4 CYS B 42 CYS B 58 1555 1555 2.03 SSBOND 5 CYS B 136 CYS B 201 1555 1555 2.04 SSBOND 6 CYS B 168 CYS B 182 1555 1555 2.03 CISPEP 1 THR A 224 PRO A 225 0 0.45 CISPEP 2 THR B 224 PRO B 225 0 -0.97 CRYST1 56.640 154.600 57.240 90.00 119.76 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017655 0.000000 0.010095 0.00000 SCALE2 0.000000 0.006468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020124 0.00000