HEADER HYDROLASE 07-AUG-00 1FIW TITLE THREE-DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM RAM SPERMATOZOA CAVEAT 1FIW MAN B 4 HAS WRONG CHIRALITY AT ATOM C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-ACROSIN HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: BETA-ACROSIN LIGHT CHAIN; COMPND 6 CHAIN: L SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 3 ORGANISM_COMMON: SHEEP; SOURCE 4 ORGANISM_TAXID: 9940; SOURCE 5 ORGAN: TESTIS; SOURCE 6 CELL: SPERMATOZOA; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 9 ORGANISM_COMMON: SHEEP; SOURCE 10 ORGANISM_TAXID: 9940; SOURCE 11 ORGAN: TESTIS; SOURCE 12 CELL: SPERMATOZOA KEYWDS ANTI-PARALLEL BETA-BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TRANTER,J.A.READ,R.JONES,R.L.BRADY REVDAT 7 09-OCT-24 1FIW 1 REMARK HETSYN REVDAT 6 29-JUL-20 1FIW 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 31-JAN-18 1FIW 1 REMARK REVDAT 4 13-JUL-11 1FIW 1 VERSN REVDAT 3 24-FEB-09 1FIW 1 VERSN REVDAT 2 01-APR-03 1FIW 1 JRNL REVDAT 1 08-NOV-00 1FIW 0 JRNL AUTH R.TRANTER,J.A.READ,R.JONES,R.L.BRADY JRNL TITL EFFECTOR SITES IN THE THREE-DIMENSIONAL STRUCTURE OF JRNL TITL 2 MAMMALIAN SPERM BETA-ACROSIN. JRNL REF STRUCTURE FOLD.DES. V. 8 1179 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11080640 JRNL DOI 10.1016/S0969-2126(00)00523-2 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.TRANTER REMARK 1 TITL THREE DIMENSIONAL STRUCTURE OF ACROSIN FROM RAM AND BOAR REMARK 1 TITL 2 SPERMATOZOA REMARK 1 REF TO BE PUBLISHED REMARK 1 PUBL UNIVERSITY OF BRISTOL (THESIS) REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 20601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2138 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.00000 REMARK 3 B22 (A**2) : -2.00000 REMARK 3 B33 (A**2) : 3.00000 REMARK 3 B12 (A**2) : -1.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.202 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.149 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.613 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.022 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : 2.242 ; 1.968 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.010 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.154 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.276 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.190 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.424 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.388 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD REFINEMENT REMARK 4 REMARK 4 1FIW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.29800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, SODIUM FORMATE, P REMARK 280 -AMINOBENZAMIDINE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 18K, TEMPERATURE 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.55667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.27833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.41750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.13917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 100.69583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.55667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.27833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.13917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.41750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 100.69583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HETERODIMER OF CHAIN A AND L LINKED TOGETHER BY TWO REMARK 300 DISULPHIDE BONDS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 255 REMARK 465 SER A 256 REMARK 465 PRO A 257 REMARK 465 ALA A 258 REMARK 465 SER A 259 REMARK 465 THR A 260 REMARK 465 PRO A 261 REMARK 465 GLY A 262 REMARK 465 ALA A 263 REMARK 465 GLN A 264 REMARK 465 ALA A 265 REMARK 465 SER A 266 REMARK 465 SER A 267 REMARK 465 GLY A 268 REMARK 465 SER A 269 REMARK 465 VAL A 270 REMARK 465 GLN A 271 REMARK 465 PRO A 272 REMARK 465 SER A 273 REMARK 465 VAL A 274 REMARK 465 ARG A 275 REMARK 465 PRO A 276 REMARK 465 PRO A 277 REMARK 465 TRP A 278 REMARK 465 PHE A 279 REMARK 465 PHE A 280 REMARK 465 GLN A 281 REMARK 465 GLN A 282 REMARK 465 ILE A 283 REMARK 465 THR A 284 REMARK 465 ASP L 1 REMARK 465 ASN L 2 REMARK 465 ARG L 17 REMARK 465 GLN L 18 REMARK 465 GLY L 19 REMARK 465 GLY L 20 REMARK 465 VAL L 21 REMARK 465 ARG L 22 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP A 201B REMARK 475 SER A 202 REMARK 475 ALA A 202A REMARK 475 GLU A 202B REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 61B CB CG CD CE NZ REMARK 480 GLU A 74 CG CD OE1 OE2 REMARK 480 LYS A 75D CG CD CE NZ REMARK 480 LYS A 77 CB CG CD CE NZ REMARK 480 ARG A 126A CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 149 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 201A CB CG CD CE NZ REMARK 480 MET A 249 CB CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 369 O HOH A 462 1.99 REMARK 500 C6 NAG B 1 C1 FUL B 5 2.06 REMARK 500 C4 NAG B 2 C2 BMA B 3 2.10 REMARK 500 C4 NAG B 2 O2 BMA B 3 2.17 REMARK 500 C4 NAG B 2 C1 BMA B 3 2.19 REMARK 500 OH TYR A 203 O HOH A 359 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 175 NH2 ARG A 175 11655 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 74 CB GLU A 74 CG 0.164 REMARK 500 LYS A 77 CA LYS A 77 CB -0.151 REMARK 500 TYR A 94 CD1 TYR A 94 CE1 -0.115 REMARK 500 ARG A 149 CA ARG A 149 CB -0.167 REMARK 500 GLU A 202B C ASN A 202C N -0.293 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 21 CB - CG - OD1 ANGL. DEV. = 8.0 DEGREES REMARK 500 PHE A 66 O - C - N ANGL. DEV. = -10.6 DEGREES REMARK 500 ASP A 189 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 194 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 VAL A 204 O - C - N ANGL. DEV. = -10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 78 136.60 -39.14 REMARK 500 THR A 151 170.42 -54.00 REMARK 500 TRP A 171 -115.25 -113.23 REMARK 500 LYS A 188 -26.74 80.97 REMARK 500 ASP A 201B -116.15 -31.53 REMARK 500 SER A 202 71.72 174.30 REMARK 500 SER A 214 -70.94 -116.18 REMARK 500 ALA A 221 18.77 59.58 REMARK 500 ARG L 14 -14.00 -46.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 126A 0.28 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 130 15.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FIZ RELATED DB: PDB REMARK 900 THREE DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM BOAR SPERMATOZOA. DBREF 1FIW A 16 284 UNP Q9GL10 ACRO_SHEEP 40 329 DBREF 1FIW L 1 22 PDB 1FIW 1FIW 1 22 SEQRES 1 A 290 ILE ILE GLY GLY GLN ASP ALA ALA HIS GLY ALA TRP PRO SEQRES 2 A 290 TRP MET VAL SER LEU GLN ILE PHE THR TYR HIS ASN ASN SEQRES 3 A 290 ARG ARG TYR HIS VAL CYS GLY GLY SER LEU LEU ASN SER SEQRES 4 A 290 GLN TRP LEU LEU THR ALA ALA HIS CYS PHE ARG ILE LYS SEQRES 5 A 290 LYS LYS VAL THR ASP TRP ARG LEU ILE PHE GLY ALA LYS SEQRES 6 A 290 GLU VAL GLU TRP GLY THR ASN LYS PRO VAL LYS PRO PRO SEQRES 7 A 290 LEU GLN GLU ARG TYR VAL GLU LYS ILE ILE ILE HIS GLU SEQRES 8 A 290 LYS TYR SER ALA SER SER GLU ALA ASN ASP ILE ALA LEU SEQRES 9 A 290 MET LYS ILE THR PRO PRO VAL THR CYS GLY HIS PHE ILE SEQRES 10 A 290 GLY PRO GLY CYS LEU PRO GLN PHE ARG ALA GLY PRO PRO SEQRES 11 A 290 ARG VAL PRO GLN THR CYS TRP VAL ALA GLY TRP GLY PHE SEQRES 12 A 290 LEU GLN GLU ASN ALA ARG ARG THR SER PRO MET LEU GLN SEQRES 13 A 290 GLU ALA ARG VAL ASP LEU ILE ASP LEU GLY LEU CYS ASN SEQRES 14 A 290 SER THR ARG TRP TYR ASN GLY ARG ILE ARG SER THR ASN SEQRES 15 A 290 VAL CYS ALA GLY TYR PRO GLU GLY LYS ILE ASP THR CYS SEQRES 16 A 290 GLN GLY ASP SER GLY GLY PRO LEU MET CYS LYS ASP SER SEQRES 17 A 290 ALA GLU ASN SER TYR VAL VAL VAL GLY ILE THR SER TRP SEQRES 18 A 290 GLY VAL GLY CYS ALA ARG ALA LYS ARG PRO GLY VAL TYR SEQRES 19 A 290 THR SER THR TRP SER TYR LEU ASN TRP ILE ALA SER LYS SEQRES 20 A 290 ILE GLY SER THR ALA VAL HIS MET ILE GLN LEU PRO THR SEQRES 21 A 290 ALA SER PRO ALA SER THR PRO GLY ALA GLN ALA SER SER SEQRES 22 A 290 GLY SER VAL GLN PRO SER VAL ARG PRO PRO TRP PHE PHE SEQRES 23 A 290 GLN GLN ILE THR SEQRES 1 L 22 ASP ASN THR THR CYS ASP GLY PRO CYS GLY VAL ARG PHE SEQRES 2 L 22 ARG GLN ASN ARG GLN GLY GLY VAL ARG MODRES 1FIW ASN A 169 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET FUL B 5 10 HET PBZ A 305 10 HET PBZ A 306 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM PBZ P-AMINO BENZAMIDINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 3 FUL C6 H12 O5 FORMUL 4 PBZ 2(C7 H10 N3 1+) FORMUL 6 HOH *191(H2 O) HELIX 1 1 ALA A 55 ARG A 60 5 6 HELIX 2 3 ASP A 164 ASN A 169 1 6 HELIX 3 4 TYR A 234 GLY A 243 1 10 HELIX 4 5 GLY A 243 ILE A 250 1 8 SHEET 1 A 8 GLN A 20 ASP A 21 0 SHEET 2 A 8 GLN A 156 ILE A 163 -1 O GLU A 157 N GLN A 20 SHEET 3 A 8 ASN A 180 GLY A 184 -1 O CYS A 182 N ILE A 163 SHEET 4 A 8 GLY A 226 SER A 230 -1 O GLY A 226 N ALA A 183 SHEET 5 A 8 TYR A 203 TRP A 215 -1 O ILE A 212 N THR A 229 SHEET 6 A 8 PRO A 198 LYS A 201A-1 N LEU A 199 O GLY A 211 SHEET 7 A 8 THR A 135 GLY A 140 -1 O TRP A 137 N MET A 200 SHEET 8 A 8 GLN A 156 ILE A 163 -1 N GLN A 156 O GLY A 140 SHEET 1 B 7 ALA A 104 THR A 109 0 SHEET 2 B 7 TRP A 51 THR A 54 -1 O LEU A 52 N MET A 106 SHEET 3 B 7 ARG A 37G ASN A 48 -1 N SER A 45 O LEU A 53 SHEET 4 B 7 MET A 30 THR A 37B-1 N VAL A 31 O GLY A 44 SHEET 5 B 7 TRP A 63 PHE A 66 -1 O ARG A 64 N GLN A 34 SHEET 6 B 7 GLN A 81 ILE A 90 -1 O GLN A 81 N PHE A 66 SHEET 7 B 7 ALA A 104 THR A 109 -1 O LEU A 105 N ILE A 89 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.04 SSBOND 2 CYS A 114 CYS L 5 1555 1555 2.01 SSBOND 3 CYS A 122 CYS L 9 1555 1555 2.01 SSBOND 4 CYS A 136 CYS A 201 1555 1555 2.01 SSBOND 5 CYS A 168 CYS A 182 1555 1555 2.03 SSBOND 6 CYS A 191 CYS A 220 1555 1555 2.03 LINK ND2 ASN A 169 C1 NAG B 1 1555 1555 1.42 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.42 LINK O6 NAG B 1 C1 FUL B 5 1555 1555 1.42 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.46 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.43 CISPEP 1 PRO A 78 PRO A 79 0 1.90 CISPEP 2 THR A 109 PRO A 110 0 -8.05 CISPEP 3 VAL A 132 PRO A 133 0 -2.56 CISPEP 4 SER A 202 ALA A 202A 0 0.17 CRYST1 105.288 105.288 120.835 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009498 0.005484 0.000000 0.00000 SCALE2 0.000000 0.010967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008276 0.00000