HEADER HYDROLASE 07-AUG-00 1FIZ TITLE THREE DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM BOAR SPERMATOZOA CAVEAT 1FIZ NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-ACROSIN HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: BETA-ACROSIN LIGHT CHAIN; COMPND 6 CHAIN: L SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: TESTIS; SOURCE 6 CELL: SPERMATOZOA; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 9 ORGANISM_COMMON: PIG; SOURCE 10 ORGANISM_TAXID: 9823; SOURCE 11 ORGAN: TESTIS; SOURCE 12 CELL: SPERMATOZOA KEYWDS ANTI-PARALLEL BETA-BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TRANTER,J.A.READ,R.JONES,R.L.BRADY REVDAT 7 30-OCT-24 1FIZ 1 REMARK HETSYN REVDAT 6 29-JUL-20 1FIZ 1 CAVEAT COMPND REMARK HET REVDAT 6 2 1 HETNAM FORMUL LINK SITE REVDAT 6 3 1 ATOM REVDAT 5 31-JAN-18 1FIZ 1 REMARK REVDAT 4 24-FEB-09 1FIZ 1 VERSN REVDAT 3 01-APR-03 1FIZ 1 JRNL REVDAT 2 09-OCT-02 1FIZ 1 REMARK REVDAT 1 08-NOV-00 1FIZ 0 JRNL AUTH R.TRANTER,J.A.READ,R.JONES,R.L.BRADY JRNL TITL EFFECTOR SITES IN THE THREE-DIMENSIONAL STRUCTURE OF JRNL TITL 2 MAMMALIAN SPERM BETA-ACROSIN. JRNL REF STRUCTURE FOLD.DES. V. 8 1179 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11080640 JRNL DOI 10.1016/S0969-2126(00)00523-2 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.TRANTER REMARK 1 TITL THREE DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM RAM AND REMARK 1 TITL 2 BOAR SPERMATOZOA REMARK 1 REF THESIS REMARK 1 PUBL UNIVERSITY OF BRISTOL (THESIS) REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 8711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 408 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2152 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 79 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.411 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.347 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.171 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.029 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : 2.650 ; 1.986 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.010 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.152 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.188 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.239 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.475 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.641 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUN LIKELIHOOD REFINEMENT CNS WAS REMARK 3 ALSO USED FOR REFINEMENT. REMARK 4 REMARK 4 1FIZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.244 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8303 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, AMMONIUM SULPHATE, SODIUM REMARK 280 CACODYLATE, P-AMINOBENZAMIDINE, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 18K, TEMPERATURE 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.32000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.32000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.32000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.32000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 65.32000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 65.32000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 65.32000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 65.32000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 65.32000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 65.32000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 65.32000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 65.32000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 65.32000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 32.66000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 97.98000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 32.66000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 32.66000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 32.66000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 97.98000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 32.66000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 97.98000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 32.66000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 97.98000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 32.66000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 97.98000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 97.98000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 32.66000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 97.98000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 32.66000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 32.66000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 32.66000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 97.98000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 32.66000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 32.66000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 97.98000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 97.98000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 97.98000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 32.66000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 97.98000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 32.66000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 97.98000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 32.66000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 32.66000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 32.66000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HETERODIMER OF CHAIN A AND B LINKED TOGETHER BY TWO REMARK 300 DISULPHIDE BONDS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 163.30000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 32.66000 REMARK 350 BIOMT3 2 -1.000000 0.000000 0.000000 163.30000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG L 0 REMARK 465 ASP L 1 REMARK 465 ASN L 2 REMARK 465 LYS L 16 REMARK 465 LEU L 17 REMARK 465 GLU L 18 REMARK 465 SER L 19 REMARK 465 GLY L 20 REMARK 465 MET L 21 REMARK 465 ARG L 22 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 20 CB CG SD CE REMARK 480 TYR A 37C CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR A 37C OH REMARK 480 HIS A 37D CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS A 50 CB CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 72 CD OE1 OE2 REMARK 480 LYS A 75D CB CG CD CE NZ REMARK 480 LYS A 77 CD CE NZ REMARK 480 LYS A 93 CD CE NZ REMARK 480 ARG A 130 CB CG CD NE CZ NH1 NH2 REMARK 480 THR A 135 CB OG1 CG2 REMARK 480 LYS A 145 CB CG CD CE NZ REMARK 480 ARG A 150 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 159 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 166 CG CD OE1 OE2 REMARK 480 ARG A 186 CB CG CD NE CZ NH1 NH2 REMARK 480 GLN L 15 CB CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 NDG B 2 O2 BMA B 3 1.99 REMARK 500 O4 NDG B 2 C2 BMA B 3 2.05 REMARK 500 C6 NAG B 1 C1 FUL B 4 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE A 90 CA ILE A 90 CB -0.150 REMARK 500 VAL A 181 CB VAL A 181 CG1 -0.145 REMARK 500 VAL A 217 C GLY A 219 N -0.152 REMARK 500 GLN L 15 CA GLN L 15 CB -0.146 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 34 CA - C - N ANGL. DEV. = -14.7 DEGREES REMARK 500 GLN A 34 O - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG A 130 CA - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG A 130 O - C - N ANGL. DEV. = -18.2 DEGREES REMARK 500 PRO A 133 N - CD - CG ANGL. DEV. = -9.2 DEGREES REMARK 500 ASP A 201B CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 224 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASN A 236 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG L 12 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 24 129.09 -39.25 REMARK 500 HIS A 37D 26.82 -77.71 REMARK 500 ASN A 37E 10.75 168.39 REMARK 500 ASN A 37F 19.60 48.69 REMARK 500 PHE A 59 25.60 -77.25 REMARK 500 ASN A 61 16.56 50.74 REMARK 500 VAL A 61D -16.96 -40.01 REMARK 500 ASN A 71 -30.08 -131.14 REMARK 500 TRP A 75 176.52 -57.39 REMARK 500 PRO A 78 155.30 -45.59 REMARK 500 LYS A 147 -145.06 65.26 REMARK 500 TRP A 171 -93.64 -112.24 REMARK 500 LYS A 188 -30.16 73.44 REMARK 500 ARG A 201A 174.65 175.99 REMARK 500 TRP A 215 -156.26 -157.84 REMARK 500 LYS A 223 17.08 52.42 REMARK 500 ASN A 236 -76.43 -20.69 REMARK 500 THR A 254 72.61 -112.34 REMARK 500 ASP L 6 -154.14 -89.48 REMARK 500 PHE L 13 58.39 37.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 130 11.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FIW RELATED DB: PDB REMARK 900 THREE DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM RAM SPERMATOZOA. DBREF 1FIZ A 16 257 UNP P08001 ACRO_PIG 40 302 DBREF 1FIZ L 0 22 UNP P08001 ACRO_PIG 17 39 SEQRES 1 A 263 VAL VAL GLY GLY MET SER ALA GLU PRO GLY ALA TRP PRO SEQRES 2 A 263 TRP MET VAL SER LEU GLN ILE PHE MET TYR HIS ASN ASN SEQRES 3 A 263 ARG ARG TYR HIS THR CYS GLY GLY ILE LEU LEU ASN SER SEQRES 4 A 263 HIS TRP VAL LEU THR ALA ALA HIS CYS PHE LYS ASN LYS SEQRES 5 A 263 LYS LYS VAL THR ASP TRP ARG LEU ILE PHE GLY ALA ASN SEQRES 6 A 263 GLU VAL VAL TRP GLY SER ASN LYS PRO VAL LYS PRO PRO SEQRES 7 A 263 LEU GLN GLU ARG PHE VAL GLU GLU ILE ILE ILE HIS GLU SEQRES 8 A 263 LYS TYR VAL SER GLY LEU GLU ILE ASN ASP ILE ALA LEU SEQRES 9 A 263 ILE LYS ILE THR PRO PRO VAL PRO CYS GLY PRO PHE ILE SEQRES 10 A 263 GLY PRO GLY CYS LEU PRO GLN PHE LYS ALA GLY PRO PRO SEQRES 11 A 263 ARG ALA PRO GLN THR CYS TRP VAL THR GLY TRP GLY TYR SEQRES 12 A 263 LEU LYS GLU LYS GLY PRO ARG THR SER PRO THR LEU GLN SEQRES 13 A 263 GLU ALA ARG VAL ALA LEU ILE ASP LEU GLU LEU CYS ASN SEQRES 14 A 263 SER THR ARG TRP TYR ASN GLY ARG ILE ARG SER THR ASN SEQRES 15 A 263 VAL CYS ALA GLY TYR PRO ARG GLY LYS ILE ASP THR CYS SEQRES 16 A 263 GLN GLY ASP SER GLY GLY PRO LEU MET CYS ARG ASP ARG SEQRES 17 A 263 ALA GLU ASN THR PHE VAL VAL VAL GLY ILE THR SER TRP SEQRES 18 A 263 GLY VAL GLY CYS ALA ARG ALA LYS ARG PRO GLY VAL TYR SEQRES 19 A 263 THR SER THR TRP PRO TYR LEU ASN TRP ILE ALA SER LYS SEQRES 20 A 263 ILE GLY SER ASN ALA LEU GLN MET VAL GLN LEU GLY THR SEQRES 21 A 263 PRO PRO ARG SEQRES 1 L 23 ARG ASP ASN ALA THR CYS ASP GLY PRO CYS GLY LEU ARG SEQRES 2 L 23 PHE ARG GLN LYS LEU GLU SER GLY MET ARG MODRES 1FIZ ASN A 169 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NDG B 2 14 HET BMA B 3 11 HET FUL B 4 10 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET PBZ A 308 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM PBZ P-AMINO BENZAMIDINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN NDG N-ACETYL-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NDG ALPHA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2- HETSYN 3 NDG ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY-A- HETSYN 4 NDG D-GLUCOPYRANOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 3 NAG C8 H15 N O6 FORMUL 3 NDG C8 H15 N O6 FORMUL 3 BMA C6 H12 O6 FORMUL 3 FUL C6 H12 O5 FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 PBZ C7 H10 N3 1+ FORMUL 9 HOH *25(H2 O) HELIX 1 1 ALA A 56 LYS A 60 5 5 HELIX 2 2 ASP A 164 SER A 170 1 7 HELIX 3 3 TYR A 234 GLY A 243 1 10 HELIX 4 4 GLY A 243 MET A 249 1 7 SHEET 1 A 8 MET A 20 SER A 21 0 SHEET 2 A 8 GLN A 156 ILE A 163 -1 N GLU A 157 O MET A 20 SHEET 3 A 8 THR A 135 GLY A 140 -1 O CYS A 136 N VAL A 160 SHEET 4 A 8 PRO A 198 ARG A 201A-1 O PRO A 198 N THR A 139 SHEET 5 A 8 VAL A 204 TRP A 215 -1 O VAL A 204 N CYS A 201 SHEET 6 A 8 GLY A 226 SER A 230 -1 N VAL A 227 O TRP A 215 SHEET 7 A 8 ASN A 180 GLY A 184 -1 O VAL A 181 N TYR A 228 SHEET 8 A 8 GLN A 156 ILE A 163 -1 O ALA A 161 N GLY A 184 SHEET 1 B 7 MET A 30 MET A 37B 0 SHEET 2 B 7 ARG A 37G ASN A 48 -1 O ARG A 37G N MET A 37B SHEET 3 B 7 TRP A 51 THR A 54 -1 O TRP A 51 N LEU A 47 SHEET 4 B 7 ALA A 104 THR A 109 -1 N ALA A 104 O THR A 54 SHEET 5 B 7 GLN A 81 ILE A 90 -1 O PHE A 84 N THR A 109 SHEET 6 B 7 TRP A 63 PHE A 66 -1 N LEU A 65 O ARG A 83 SHEET 7 B 7 MET A 30 MET A 37B-1 N SER A 32 O ILE A 65A SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.07 SSBOND 2 CYS A 114 CYS L 5 1555 1555 2.01 SSBOND 3 CYS A 122 CYS L 9 1555 1555 2.10 SSBOND 4 CYS A 136 CYS A 201 1555 1555 1.98 SSBOND 5 CYS A 168 CYS A 182 1555 1555 1.98 SSBOND 6 CYS A 191 CYS A 220 1555 1555 2.05 LINK ND2 ASN A 169 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NDG B 2 1555 1555 1.48 LINK O6 NAG B 1 C1 FUL B 4 1555 1555 1.43 LINK O4 NDG B 2 C1 BMA B 3 1555 1555 1.44 CISPEP 1 PRO A 78 PRO A 79 0 1.69 CISPEP 2 THR A 109 PRO A 110 0 -2.83 CISPEP 3 ALA A 132 PRO A 133 0 -5.75 CRYST1 130.640 130.640 130.640 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007655 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007655 0.00000