data_1FMQ
#
_entry.id 1FMQ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.386
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1FMQ pdb_00001fmq 10.2210/pdb1fmq/pdb
NDB DD0034 ? ?
RCSB RCSB011719 ? ?
WWPDB D_1000011719 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2000-09-11
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2017-10-04
5 'Structure model' 1 4 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Refinement description'
4 5 'Structure model' 'Data collection'
5 5 'Structure model' 'Database references'
6 5 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' pdbx_struct_conn_angle
6 5 'Structure model' struct_conn
7 5 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
5 5 'Structure model' '_pdbx_struct_conn_angle.value'
6 5 'Structure model' '_struct_conn.pdbx_dist_value'
7 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
8 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
9 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
10 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1FMQ
_pdbx_database_status.recvd_initial_deposition_date 2000-08-18
_pdbx_database_status.deposit_site NDB
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry N
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name NDB
_pdbx_database_related.db_id DD0035
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Simpson, I.J.' 1
'Lee, M.' 2
'Kumar, A.' 3
'Boykin, D.W.' 4
'Neidle, S.' 5
#
_citation.id primary
_citation.title
'DNA minor groove interactions and the biological activity of 2,5-bis-[4-(N-alkylamidino)phenyl] furans'
_citation.journal_abbrev Bioorg.Med.Chem.Lett.
_citation.journal_volume 10
_citation.page_first 2593
_citation.page_last 2597
_citation.year 2000
_citation.journal_id_ASTM BMCLE8
_citation.country UK
_citation.journal_id_ISSN 0960-894X
_citation.journal_id_CSD 1127
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 11128631
_citation.pdbx_database_id_DOI '10.1016/S0960-894X(00)00511-4'
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Simpson, I.J.' 1 ?
primary 'Lee, M.' 2 ?
primary 'Kumar, A.' 3 ?
primary 'Boykin, D.W.' 4 ?
primary 'Neidle, S.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'" 3663.392 2 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ?
3 non-polymer syn '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' 416.558 1 ? ? ? ?
4 water nat water 18.015 97 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' D34
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DC n
1 4 DG n
1 5 DA n
1 6 DA n
1 7 DT n
1 8 DT n
1 9 DC n
1 10 DG n
1 11 DC n
1 12 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
D34 non-polymer . '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' ? 'C26 H32 N4 O' 416.558
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DC 3 3 3 DC C A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DA 5 5 5 DA A A . n
A 1 6 DA 6 6 6 DA A A . n
A 1 7 DT 7 7 7 DT T A . n
A 1 8 DT 8 8 8 DT T A . n
A 1 9 DC 9 9 9 DC C A . n
A 1 10 DG 10 10 10 DG G A . n
A 1 11 DC 11 11 11 DC C A . n
A 1 12 DG 12 12 12 DG G A . n
B 1 1 DC 1 13 13 DC C B . n
B 1 2 DG 2 14 14 DG G B . n
B 1 3 DC 3 15 15 DC C B . n
B 1 4 DG 4 16 16 DG G B . n
B 1 5 DA 5 17 17 DA A B . n
B 1 6 DA 6 18 18 DA A B . n
B 1 7 DT 7 19 19 DT T B . n
B 1 8 DT 8 20 20 DT T B . n
B 1 9 DC 9 21 21 DC C B . n
B 1 10 DG 10 22 22 DG G B . n
B 1 11 DC 11 23 23 DC C B . n
B 1 12 DG 12 24 24 DG G B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG 1 26 26 MG MO6 A .
D 3 D34 1 25 25 D34 D34 A .
E 4 HOH 1 28 28 HOH HOH A .
E 4 HOH 2 29 29 HOH HOH A .
E 4 HOH 3 32 32 HOH HOH A .
E 4 HOH 4 33 33 HOH HOH A .
E 4 HOH 5 34 34 HOH HOH A .
E 4 HOH 6 35 35 HOH HOH A .
E 4 HOH 7 36 36 HOH HOH A .
E 4 HOH 8 38 38 HOH HOH A .
E 4 HOH 9 39 39 HOH HOH A .
E 4 HOH 10 41 41 HOH HOH A .
E 4 HOH 11 42 42 HOH HOH A .
E 4 HOH 12 45 45 HOH HOH A .
E 4 HOH 13 46 46 HOH HOH A .
E 4 HOH 14 47 47 HOH HOH A .
E 4 HOH 15 48 48 HOH HOH A .
E 4 HOH 16 49 49 HOH HOH A .
E 4 HOH 17 50 50 HOH HOH A .
E 4 HOH 18 52 52 HOH HOH A .
E 4 HOH 19 54 54 HOH HOH A .
E 4 HOH 20 58 58 HOH HOH A .
E 4 HOH 21 60 60 HOH HOH A .
E 4 HOH 22 62 62 HOH HOH A .
E 4 HOH 23 63 63 HOH HOH A .
E 4 HOH 24 65 65 HOH HOH A .
E 4 HOH 25 70 70 HOH HOH A .
E 4 HOH 26 75 75 HOH HOH A .
E 4 HOH 27 77 77 HOH HOH A .
E 4 HOH 28 78 78 HOH HOH A .
E 4 HOH 29 79 79 HOH HOH A .
E 4 HOH 30 80 80 HOH HOH A .
E 4 HOH 31 82 82 HOH HOH A .
E 4 HOH 32 88 88 HOH HOH A .
E 4 HOH 33 90 90 HOH HOH A .
E 4 HOH 34 91 91 HOH HOH A .
E 4 HOH 35 92 92 HOH HOH A .
E 4 HOH 36 93 93 HOH HOH A .
E 4 HOH 37 94 94 HOH HOH A .
E 4 HOH 38 95 95 HOH HOH A .
E 4 HOH 39 96 96 HOH HOH A .
E 4 HOH 40 97 97 HOH HOH A .
E 4 HOH 41 98 98 HOH HOH A .
E 4 HOH 42 100 100 HOH HOH A .
E 4 HOH 43 102 102 HOH HOH A .
E 4 HOH 44 103 103 HOH HOH A .
E 4 HOH 45 104 104 HOH HOH A .
E 4 HOH 46 107 107 HOH HOH A .
E 4 HOH 47 109 109 HOH HOH A .
E 4 HOH 48 110 110 HOH HOH A .
E 4 HOH 49 113 113 HOH HOH A .
E 4 HOH 50 114 114 HOH HOH A .
E 4 HOH 51 116 116 HOH HOH A .
E 4 HOH 52 117 117 HOH HOH A .
E 4 HOH 53 120 120 HOH HOH A .
E 4 HOH 54 122 122 HOH HOH A .
E 4 HOH 55 127 127 HOH HOH A .
E 4 HOH 56 128 26 HOH MO6 A .
E 4 HOH 57 129 26 HOH MO6 A .
E 4 HOH 58 130 26 HOH MO6 A .
E 4 HOH 59 131 26 HOH MO6 A .
E 4 HOH 60 132 26 HOH MO6 A .
E 4 HOH 61 133 26 HOH MO6 A .
F 4 HOH 1 30 30 HOH HOH B .
F 4 HOH 2 37 37 HOH HOH B .
F 4 HOH 3 40 40 HOH HOH B .
F 4 HOH 4 43 43 HOH HOH B .
F 4 HOH 5 44 44 HOH HOH B .
F 4 HOH 6 51 51 HOH HOH B .
F 4 HOH 7 53 53 HOH HOH B .
F 4 HOH 8 56 56 HOH HOH B .
F 4 HOH 9 59 59 HOH HOH B .
F 4 HOH 10 66 66 HOH HOH B .
F 4 HOH 11 68 68 HOH HOH B .
F 4 HOH 12 71 71 HOH HOH B .
F 4 HOH 13 72 72 HOH HOH B .
F 4 HOH 14 73 73 HOH HOH B .
F 4 HOH 15 74 74 HOH HOH B .
F 4 HOH 16 76 76 HOH HOH B .
F 4 HOH 17 81 81 HOH HOH B .
F 4 HOH 18 83 83 HOH HOH B .
F 4 HOH 19 84 84 HOH HOH B .
F 4 HOH 20 85 85 HOH HOH B .
F 4 HOH 21 86 86 HOH HOH B .
F 4 HOH 22 87 87 HOH HOH B .
F 4 HOH 23 89 89 HOH HOH B .
F 4 HOH 24 99 99 HOH HOH B .
F 4 HOH 25 101 101 HOH HOH B .
F 4 HOH 26 105 105 HOH HOH B .
F 4 HOH 27 106 106 HOH HOH B .
F 4 HOH 28 108 108 HOH HOH B .
F 4 HOH 29 111 111 HOH HOH B .
F 4 HOH 30 112 112 HOH HOH B .
F 4 HOH 31 118 118 HOH HOH B .
F 4 HOH 32 119 119 HOH HOH B .
F 4 HOH 33 123 123 HOH HOH B .
F 4 HOH 34 124 124 HOH HOH B .
F 4 HOH 35 125 125 HOH HOH B .
F 4 HOH 36 126 126 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
SCALEPACK 'data scaling' . ? 1
X-PLOR 'model building' . ? 2
SHELX refinement . ? 3
X-PLOR phasing . ? 4
SHELXL-97 refinement . ? 5
#
_cell.entry_id 1FMQ
_cell.length_a 24.86
_cell.length_b 40.71
_cell.length_c 66.44
_cell.angle_alpha 90.
_cell.angle_beta 90.
_cell.angle_gamma 90.
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1FMQ
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting orthorhombic
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 1FMQ
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 44.05
_exptl_crystal.density_Matthews 2.20
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pH 7
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details
;MgCl2 2ul 125mM, Spermine 1ul 7.5 mM, Oligonucleotide 2ul 2mM,
Drug 2ul 2mM, MPD 3ul 27% v/v, VAPOR DIFFUSION, SITTING DROP, temperature 291K
;
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.details
1 1 1 MgCl2 ? ? ?
1 2 1 Spermine ? ? ?
1 3 1 MPD ? ? ?
1 4 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 291
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1FMQ
_reflns.observed_criterion_sigma_I 1.0
_reflns.observed_criterion_sigma_F 2.0
_reflns.d_resolution_low 10.
_reflns.d_resolution_high 2.0
_reflns.number_obs 4992
_reflns.number_all ?
_reflns.percent_possible_obs 95.4
_reflns.pdbx_Rmerge_I_obs 0.045
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 5
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 1FMQ
_refine.ls_number_reflns_obs 4992
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_d_res_low 8.
_refine.ls_d_res_high 2.
_refine.ls_percent_reflns_obs 95.4
_refine.ls_R_factor_obs 0.188
_refine.ls_R_factor_all 0.193
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free 0.209
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.0
_refine.ls_number_reflns_R_free 250
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'Parkinson et al.'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details random
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 486
_refine_hist.pdbx_number_atoms_ligand 38
_refine_hist.number_atoms_solvent 91
_refine_hist.number_atoms_total 615
_refine_hist.d_res_high 2.
_refine_hist.d_res_low 8.
#
_database_PDB_matrix.entry_id 1FMQ
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1FMQ
_struct.title 'Cyclo-butyl-bis-furamidine complexed with dCGCGAATTCGCG'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1FMQ
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA-drug minor groove complex, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
F N N 4 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1FMQ
_struct_ref.pdbx_db_accession 1FMQ
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1FMQ A 1 ? 12 ? 1FMQ 1 ? 12 ? 1 12
2 1 1FMQ B 1 ? 12 ? 1FMQ 13 ? 24 ? 13 24
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.pdbx_parent_biol_id ?
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 38 1_555 ? ? ? ? ? ? ? 1.903 ? ?
metalc2 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 128 1_555 ? ? ? ? ? ? ? 2.029 ? ?
metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 129 1_555 ? ? ? ? ? ? ? 2.033 ? ?
metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 130 1_555 ? ? ? ? ? ? ? 2.041 ? ?
metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 131 1_555 ? ? ? ? ? ? ? 2.032 ? ?
metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 132 1_555 ? ? ? ? ? ? ? 2.043 ? ?
metalc7 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 133 1_555 ? ? ? ? ? ? ? 2.029 ? ?
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 128 ? 1_555 88.5 ?
2 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 129 ? 1_555 168.1 ?
3 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 129 ? 1_555 93.6 ?
4 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 79.1 ?
5 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 91.0 ?
6 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 89.1 ?
7 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 13.1 ?
8 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 88.2 ?
9 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 177.7 ?
10 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 92.2 ?
11 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 92.0 ?
12 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 175.1 ?
13 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 86.8 ?
14 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 94.0 ?
15 O ? E HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 91.3 ?
16 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 101.9 ?
17 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 87.5 ?
18 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 89.9 ?
19 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 178.1 ?
20 O ? E HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 88.8 ?
21 O ? E HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 87.5 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A MG 26 ? 7 'BINDING SITE FOR RESIDUE MG A 26'
AC2 Software A D34 25 ? 12 'BINDING SITE FOR RESIDUE D34 A 25'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 7 HOH E . ? HOH A 38 . ? 1_555 ?
2 AC1 7 HOH E . ? HOH A 128 . ? 1_555 ?
3 AC1 7 HOH E . ? HOH A 129 . ? 1_555 ?
4 AC1 7 HOH E . ? HOH A 130 . ? 1_555 ?
5 AC1 7 HOH E . ? HOH A 131 . ? 1_555 ?
6 AC1 7 HOH E . ? HOH A 132 . ? 1_555 ?
7 AC1 7 HOH E . ? HOH A 133 . ? 1_555 ?
8 AC2 12 DA A 6 ? DA A 6 . ? 1_555 ?
9 AC2 12 DT A 7 ? DT A 7 . ? 1_555 ?
10 AC2 12 DT A 8 ? DT A 8 . ? 1_555 ?
11 AC2 12 DC A 9 ? DC A 9 . ? 1_555 ?
12 AC2 12 HOH E . ? HOH A 45 . ? 1_555 ?
13 AC2 12 HOH E . ? HOH A 54 . ? 1_555 ?
14 AC2 12 HOH E . ? HOH A 116 . ? 1_555 ?
15 AC2 12 DA B 5 ? DA B 17 . ? 1_555 ?
16 AC2 12 DA B 6 ? DA B 18 . ? 1_555 ?
17 AC2 12 DT B 7 ? DT B 19 . ? 1_555 ?
18 AC2 12 DT B 8 ? DT B 20 . ? 1_555 ?
19 AC2 12 DC B 9 ? DC B 21 . ? 1_555 ?
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 O
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 HOH
_pdbx_validate_close_contact.auth_seq_id_1 38
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 O
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 HOH
_pdbx_validate_close_contact.auth_seq_id_2 131
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 0.47
#
loop_
_pdbx_validate_symm_contact.id
_pdbx_validate_symm_contact.PDB_model_num
_pdbx_validate_symm_contact.auth_atom_id_1
_pdbx_validate_symm_contact.auth_asym_id_1
_pdbx_validate_symm_contact.auth_comp_id_1
_pdbx_validate_symm_contact.auth_seq_id_1
_pdbx_validate_symm_contact.PDB_ins_code_1
_pdbx_validate_symm_contact.label_alt_id_1
_pdbx_validate_symm_contact.site_symmetry_1
_pdbx_validate_symm_contact.auth_atom_id_2
_pdbx_validate_symm_contact.auth_asym_id_2
_pdbx_validate_symm_contact.auth_comp_id_2
_pdbx_validate_symm_contact.auth_seq_id_2
_pdbx_validate_symm_contact.PDB_ins_code_2
_pdbx_validate_symm_contact.label_alt_id_2
_pdbx_validate_symm_contact.site_symmetry_2
_pdbx_validate_symm_contact.dist
1 1 O A HOH 48 ? ? 1_555 O B HOH 124 ? ? 1_455 0.36
2 1 O A HOH 58 ? ? 1_555 O B HOH 101 ? ? 4_455 1.93
#
loop_
_pdbx_validate_chiral.id
_pdbx_validate_chiral.PDB_model_num
_pdbx_validate_chiral.auth_atom_id
_pdbx_validate_chiral.label_alt_id
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_comp_id
_pdbx_validate_chiral.auth_seq_id
_pdbx_validate_chiral.PDB_ins_code
_pdbx_validate_chiral.details
_pdbx_validate_chiral.omega
1 1 C7 ? A D34 25 ? PLANAR .
2 1 "C7'" ? A D34 25 ? PLANAR .
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text 'MINOR GROOVE BINDER'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
D34 C7 C N S 1
D34 N2 N N N 2
D34 N1 N N N 3
D34 C8 C N N 4
D34 C9 C N N 5
D34 C10 C N N 6
D34 C11 C N N 7
D34 C1 C Y N 8
D34 C2 C Y N 9
D34 C3 C Y N 10
D34 C4 C Y N 11
D34 C5 C Y N 12
D34 C6 C Y N 13
D34 CA C Y N 14
D34 O1 O Y N 15
D34 CB C Y N 16
D34 "CB'" C Y N 17
D34 "CA'" C Y N 18
D34 "C1'" C Y N 19
D34 "C2'" C Y N 20
D34 "C3'" C Y N 21
D34 "C4'" C Y N 22
D34 "C5'" C Y N 23
D34 "C6'" C Y N 24
D34 "C7'" C N R 25
D34 "N2'" N N N 26
D34 "N1'" N N N 27
D34 "C8'" C N N 28
D34 "C9'" C N N 29
D34 CAX C N N 30
D34 CBX C N N 31
D34 H77 H N N 32
D34 HN2 H N N 33
D34 HN1 H N N 34
D34 HN2A H N N 35
D34 H8 H N N 36
D34 H91 H N N 37
D34 H92 H N N 38
D34 H01 H N N 39
D34 H02 H N N 40
D34 H11 H N N 41
D34 H12 H N N 42
D34 H2 H N N 43
D34 H3 H N N 44
D34 H5 H N N 45
D34 H6 H N N 46
D34 HB H N N 47
D34 "HB'" H N N 48
D34 "H2'" H N N 49
D34 "H3'" H N N 50
D34 "H5'" H N N 51
D34 "H6'" H N N 52
D34 H7B H N N 53
D34 "HN2'" H N N 54
D34 "HN'1" H N N 55
D34 "HN'2" H N N 56
D34 "H8'" H N N 57
D34 "H9'1" H N N 58
D34 "H9'2" H N N 59
D34 "H0'1" H N N 60
D34 "H0'2" H N N 61
D34 "H1'1" H N N 62
D34 "H1'2" H N N 63
DA OP3 O N N 64
DA P P N N 65
DA OP1 O N N 66
DA OP2 O N N 67
DA "O5'" O N N 68
DA "C5'" C N N 69
DA "C4'" C N R 70
DA "O4'" O N N 71
DA "C3'" C N S 72
DA "O3'" O N N 73
DA "C2'" C N N 74
DA "C1'" C N R 75
DA N9 N Y N 76
DA C8 C Y N 77
DA N7 N Y N 78
DA C5 C Y N 79
DA C6 C Y N 80
DA N6 N N N 81
DA N1 N Y N 82
DA C2 C Y N 83
DA N3 N Y N 84
DA C4 C Y N 85
DA HOP3 H N N 86
DA HOP2 H N N 87
DA "H5'" H N N 88
DA "H5''" H N N 89
DA "H4'" H N N 90
DA "H3'" H N N 91
DA "HO3'" H N N 92
DA "H2'" H N N 93
DA "H2''" H N N 94
DA "H1'" H N N 95
DA H8 H N N 96
DA H61 H N N 97
DA H62 H N N 98
DA H2 H N N 99
DC OP3 O N N 100
DC P P N N 101
DC OP1 O N N 102
DC OP2 O N N 103
DC "O5'" O N N 104
DC "C5'" C N N 105
DC "C4'" C N R 106
DC "O4'" O N N 107
DC "C3'" C N S 108
DC "O3'" O N N 109
DC "C2'" C N N 110
DC "C1'" C N R 111
DC N1 N N N 112
DC C2 C N N 113
DC O2 O N N 114
DC N3 N N N 115
DC C4 C N N 116
DC N4 N N N 117
DC C5 C N N 118
DC C6 C N N 119
DC HOP3 H N N 120
DC HOP2 H N N 121
DC "H5'" H N N 122
DC "H5''" H N N 123
DC "H4'" H N N 124
DC "H3'" H N N 125
DC "HO3'" H N N 126
DC "H2'" H N N 127
DC "H2''" H N N 128
DC "H1'" H N N 129
DC H41 H N N 130
DC H42 H N N 131
DC H5 H N N 132
DC H6 H N N 133
DG OP3 O N N 134
DG P P N N 135
DG OP1 O N N 136
DG OP2 O N N 137
DG "O5'" O N N 138
DG "C5'" C N N 139
DG "C4'" C N R 140
DG "O4'" O N N 141
DG "C3'" C N S 142
DG "O3'" O N N 143
DG "C2'" C N N 144
DG "C1'" C N R 145
DG N9 N Y N 146
DG C8 C Y N 147
DG N7 N Y N 148
DG C5 C Y N 149
DG C6 C N N 150
DG O6 O N N 151
DG N1 N N N 152
DG C2 C N N 153
DG N2 N N N 154
DG N3 N N N 155
DG C4 C Y N 156
DG HOP3 H N N 157
DG HOP2 H N N 158
DG "H5'" H N N 159
DG "H5''" H N N 160
DG "H4'" H N N 161
DG "H3'" H N N 162
DG "HO3'" H N N 163
DG "H2'" H N N 164
DG "H2''" H N N 165
DG "H1'" H N N 166
DG H8 H N N 167
DG H1 H N N 168
DG H21 H N N 169
DG H22 H N N 170
DT OP3 O N N 171
DT P P N N 172
DT OP1 O N N 173
DT OP2 O N N 174
DT "O5'" O N N 175
DT "C5'" C N N 176
DT "C4'" C N R 177
DT "O4'" O N N 178
DT "C3'" C N S 179
DT "O3'" O N N 180
DT "C2'" C N N 181
DT "C1'" C N R 182
DT N1 N N N 183
DT C2 C N N 184
DT O2 O N N 185
DT N3 N N N 186
DT C4 C N N 187
DT O4 O N N 188
DT C5 C N N 189
DT C7 C N N 190
DT C6 C N N 191
DT HOP3 H N N 192
DT HOP2 H N N 193
DT "H5'" H N N 194
DT "H5''" H N N 195
DT "H4'" H N N 196
DT "H3'" H N N 197
DT "HO3'" H N N 198
DT "H2'" H N N 199
DT "H2''" H N N 200
DT "H1'" H N N 201
DT H3 H N N 202
DT H71 H N N 203
DT H72 H N N 204
DT H73 H N N 205
DT H6 H N N 206
HOH O O N N 207
HOH H1 H N N 208
HOH H2 H N N 209
MG MG MG N N 210
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D34 C7 N2 sing N N 1
D34 C7 N1 sing N N 2
D34 C7 C4 sing N N 3
D34 C7 H77 sing N N 4
D34 N2 C8 sing N N 5
D34 N2 HN2 sing N N 6
D34 N1 HN1 sing N N 7
D34 N1 HN2A sing N N 8
D34 C8 C9 sing N N 9
D34 C8 C11 sing N N 10
D34 C8 H8 sing N N 11
D34 C9 C10 sing N N 12
D34 C9 H91 sing N N 13
D34 C9 H92 sing N N 14
D34 C10 C11 sing N N 15
D34 C10 H01 sing N N 16
D34 C10 H02 sing N N 17
D34 C11 H11 sing N N 18
D34 C11 H12 sing N N 19
D34 C1 C2 doub Y N 20
D34 C1 C6 sing Y N 21
D34 C1 CA sing Y N 22
D34 C2 C3 sing Y N 23
D34 C2 H2 sing N N 24
D34 C3 C4 doub Y N 25
D34 C3 H3 sing N N 26
D34 C4 C5 sing Y N 27
D34 C5 C6 doub Y N 28
D34 C5 H5 sing N N 29
D34 C6 H6 sing N N 30
D34 CA O1 sing Y N 31
D34 CA CB doub Y N 32
D34 O1 "CA'" sing Y N 33
D34 CB "CB'" sing Y N 34
D34 CB HB sing N N 35
D34 "CB'" "CA'" doub Y N 36
D34 "CB'" "HB'" sing N N 37
D34 "CA'" "C1'" sing Y N 38
D34 "C1'" "C2'" doub Y N 39
D34 "C1'" "C6'" sing Y N 40
D34 "C2'" "C3'" sing Y N 41
D34 "C2'" "H2'" sing N N 42
D34 "C3'" "C4'" doub Y N 43
D34 "C3'" "H3'" sing N N 44
D34 "C4'" "C5'" sing Y N 45
D34 "C4'" "C7'" sing N N 46
D34 "C5'" "C6'" doub Y N 47
D34 "C5'" "H5'" sing N N 48
D34 "C6'" "H6'" sing N N 49
D34 "C7'" "N2'" sing N N 50
D34 "C7'" "N1'" sing N N 51
D34 "C7'" H7B sing N N 52
D34 "N2'" "C8'" sing N N 53
D34 "N2'" "HN2'" sing N N 54
D34 "N1'" "HN'1" sing N N 55
D34 "N1'" "HN'2" sing N N 56
D34 "C8'" "C9'" sing N N 57
D34 "C8'" CBX sing N N 58
D34 "C8'" "H8'" sing N N 59
D34 "C9'" CAX sing N N 60
D34 "C9'" "H9'1" sing N N 61
D34 "C9'" "H9'2" sing N N 62
D34 CAX CBX sing N N 63
D34 CAX "H0'1" sing N N 64
D34 CAX "H0'2" sing N N 65
D34 CBX "H1'1" sing N N 66
D34 CBX "H1'2" sing N N 67
DA OP3 P sing N N 68
DA OP3 HOP3 sing N N 69
DA P OP1 doub N N 70
DA P OP2 sing N N 71
DA P "O5'" sing N N 72
DA OP2 HOP2 sing N N 73
DA "O5'" "C5'" sing N N 74
DA "C5'" "C4'" sing N N 75
DA "C5'" "H5'" sing N N 76
DA "C5'" "H5''" sing N N 77
DA "C4'" "O4'" sing N N 78
DA "C4'" "C3'" sing N N 79
DA "C4'" "H4'" sing N N 80
DA "O4'" "C1'" sing N N 81
DA "C3'" "O3'" sing N N 82
DA "C3'" "C2'" sing N N 83
DA "C3'" "H3'" sing N N 84
DA "O3'" "HO3'" sing N N 85
DA "C2'" "C1'" sing N N 86
DA "C2'" "H2'" sing N N 87
DA "C2'" "H2''" sing N N 88
DA "C1'" N9 sing N N 89
DA "C1'" "H1'" sing N N 90
DA N9 C8 sing Y N 91
DA N9 C4 sing Y N 92
DA C8 N7 doub Y N 93
DA C8 H8 sing N N 94
DA N7 C5 sing Y N 95
DA C5 C6 sing Y N 96
DA C5 C4 doub Y N 97
DA C6 N6 sing N N 98
DA C6 N1 doub Y N 99
DA N6 H61 sing N N 100
DA N6 H62 sing N N 101
DA N1 C2 sing Y N 102
DA C2 N3 doub Y N 103
DA C2 H2 sing N N 104
DA N3 C4 sing Y N 105
DC OP3 P sing N N 106
DC OP3 HOP3 sing N N 107
DC P OP1 doub N N 108
DC P OP2 sing N N 109
DC P "O5'" sing N N 110
DC OP2 HOP2 sing N N 111
DC "O5'" "C5'" sing N N 112
DC "C5'" "C4'" sing N N 113
DC "C5'" "H5'" sing N N 114
DC "C5'" "H5''" sing N N 115
DC "C4'" "O4'" sing N N 116
DC "C4'" "C3'" sing N N 117
DC "C4'" "H4'" sing N N 118
DC "O4'" "C1'" sing N N 119
DC "C3'" "O3'" sing N N 120
DC "C3'" "C2'" sing N N 121
DC "C3'" "H3'" sing N N 122
DC "O3'" "HO3'" sing N N 123
DC "C2'" "C1'" sing N N 124
DC "C2'" "H2'" sing N N 125
DC "C2'" "H2''" sing N N 126
DC "C1'" N1 sing N N 127
DC "C1'" "H1'" sing N N 128
DC N1 C2 sing N N 129
DC N1 C6 sing N N 130
DC C2 O2 doub N N 131
DC C2 N3 sing N N 132
DC N3 C4 doub N N 133
DC C4 N4 sing N N 134
DC C4 C5 sing N N 135
DC N4 H41 sing N N 136
DC N4 H42 sing N N 137
DC C5 C6 doub N N 138
DC C5 H5 sing N N 139
DC C6 H6 sing N N 140
DG OP3 P sing N N 141
DG OP3 HOP3 sing N N 142
DG P OP1 doub N N 143
DG P OP2 sing N N 144
DG P "O5'" sing N N 145
DG OP2 HOP2 sing N N 146
DG "O5'" "C5'" sing N N 147
DG "C5'" "C4'" sing N N 148
DG "C5'" "H5'" sing N N 149
DG "C5'" "H5''" sing N N 150
DG "C4'" "O4'" sing N N 151
DG "C4'" "C3'" sing N N 152
DG "C4'" "H4'" sing N N 153
DG "O4'" "C1'" sing N N 154
DG "C3'" "O3'" sing N N 155
DG "C3'" "C2'" sing N N 156
DG "C3'" "H3'" sing N N 157
DG "O3'" "HO3'" sing N N 158
DG "C2'" "C1'" sing N N 159
DG "C2'" "H2'" sing N N 160
DG "C2'" "H2''" sing N N 161
DG "C1'" N9 sing N N 162
DG "C1'" "H1'" sing N N 163
DG N9 C8 sing Y N 164
DG N9 C4 sing Y N 165
DG C8 N7 doub Y N 166
DG C8 H8 sing N N 167
DG N7 C5 sing Y N 168
DG C5 C6 sing N N 169
DG C5 C4 doub Y N 170
DG C6 O6 doub N N 171
DG C6 N1 sing N N 172
DG N1 C2 sing N N 173
DG N1 H1 sing N N 174
DG C2 N2 sing N N 175
DG C2 N3 doub N N 176
DG N2 H21 sing N N 177
DG N2 H22 sing N N 178
DG N3 C4 sing N N 179
DT OP3 P sing N N 180
DT OP3 HOP3 sing N N 181
DT P OP1 doub N N 182
DT P OP2 sing N N 183
DT P "O5'" sing N N 184
DT OP2 HOP2 sing N N 185
DT "O5'" "C5'" sing N N 186
DT "C5'" "C4'" sing N N 187
DT "C5'" "H5'" sing N N 188
DT "C5'" "H5''" sing N N 189
DT "C4'" "O4'" sing N N 190
DT "C4'" "C3'" sing N N 191
DT "C4'" "H4'" sing N N 192
DT "O4'" "C1'" sing N N 193
DT "C3'" "O3'" sing N N 194
DT "C3'" "C2'" sing N N 195
DT "C3'" "H3'" sing N N 196
DT "O3'" "HO3'" sing N N 197
DT "C2'" "C1'" sing N N 198
DT "C2'" "H2'" sing N N 199
DT "C2'" "H2''" sing N N 200
DT "C1'" N1 sing N N 201
DT "C1'" "H1'" sing N N 202
DT N1 C2 sing N N 203
DT N1 C6 sing N N 204
DT C2 O2 doub N N 205
DT C2 N3 sing N N 206
DT N3 C4 sing N N 207
DT N3 H3 sing N N 208
DT C4 O4 doub N N 209
DT C4 C5 sing N N 210
DT C5 C7 sing N N 211
DT C5 C6 doub N N 212
DT C7 H71 sing N N 213
DT C7 H72 sing N N 214
DT C7 H73 sing N N 215
DT C6 H6 sing N N 216
HOH O H1 sing N N 217
HOH O H2 sing N N 218
#
_ndb_struct_conf_na.entry_id 1FMQ
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 12 1_555 0.347 -0.127 0.225 -3.731 -9.761 -6.201 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1
1 A DG 2 1_555 B DC 11 1_555 -0.168 -0.294 0.079 -3.435 -11.785 -2.644 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1
1 A DC 3 1_555 B DG 10 1_555 -0.169 -0.205 0.084 -3.258 -6.221 -0.218 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1
1 A DG 4 1_555 B DC 9 1_555 -0.298 -0.288 -0.273 4.602 -10.182 -4.813 4 A_DG4:DC21_B A 4 ? B 21 ? 19 1
1 A DA 5 1_555 B DT 8 1_555 0.308 0.158 0.130 2.170 -14.708 4.923 5 A_DA5:DT20_B A 5 ? B 20 ? 20 1
1 A DA 6 1_555 B DT 7 1_555 0.391 -0.041 0.298 7.544 -18.385 9.334 6 A_DA6:DT19_B A 6 ? B 19 ? 20 1
1 A DT 7 1_555 B DA 6 1_555 -0.229 0.018 0.093 -0.398 -18.781 7.112 7 A_DT7:DA18_B A 7 ? B 18 ? 20 1
1 A DT 8 1_555 B DA 5 1_555 -0.114 -0.187 -0.175 0.683 -19.725 2.603 8 A_DT8:DA17_B A 8 ? B 17 ? 20 1
1 A DC 9 1_555 B DG 4 1_555 0.049 -0.312 -0.193 -7.224 -9.073 -3.437 9 A_DC9:DG16_B A 9 ? B 16 ? 19 1
1 A DG 10 1_555 B DC 3 1_555 -0.116 -0.144 -0.049 3.459 -5.246 3.486 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1
1 A DC 11 1_555 B DG 2 1_555 0.542 -0.298 0.204 2.147 -22.787 -3.398 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1
1 A DG 12 1_555 B DC 1 1_555 0.135 -0.150 0.383 10.224 9.676 -6.907 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 -0.113 0.224 3.391 1.208 8.464 33.579 -0.986 0.384 3.341 14.363
-2.049 34.620 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ?
1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 0.519 0.257 3.399 2.035 -4.869 37.664 1.039 -0.527 3.364 -7.496
-3.133 38.018 2 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ?
1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.393 0.757 3.293 2.943 9.485 31.526 -0.336 1.209 3.326 16.939
-5.256 33.016 3 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ?
1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 0.421 0.140 3.373 -2.505 3.297 37.016 -0.230 -1.002 3.338 5.174
3.930 37.239 4 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ?
1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 0.235 -0.359 3.109 -2.064 3.063 36.210 -0.977 -0.648 3.052 4.912
3.310 36.391 5 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ?
1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 -0.104 -0.823 3.518 2.484 -2.481 29.634 -1.039 0.763 3.553 -4.830
-4.836 29.836 6 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ?
1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 -0.257 -0.261 3.219 2.374 6.150 35.724 -1.257 0.736 3.110 9.920
-3.829 36.308 7 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ?
1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.279 0.121 3.570 -0.209 -1.739 39.560 0.401 0.386 3.563 -2.568
0.309 39.597 8 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ?
1 A DC 9 1_555 B DG 4 1_555 A DG 10 1_555 B DC 3 1_555 0.541 1.301 3.288 -0.780 2.475 31.515 1.921 -1.139 3.363 4.547
1.433 31.619 9 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ?
1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -0.988 0.768 3.519 -3.341 -10.761 43.289 2.057 0.975 3.311 -14.300
4.440 44.663 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ?
1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 0.679 0.392 3.367 -0.718 -3.601 35.635 1.166 -1.210 3.299 -5.865
1.170 35.818 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ?
#
_atom_sites.entry_id 1FMQ
_atom_sites.fract_transf_matrix[1][1] 0.040225
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.024564
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.015051
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_