HEADER TOXIN 18-SEP-00 1FV2 TITLE THE HC FRAGMENT OF TETANUS TOXIN COMPLEXED WITH AN ANALOGUE OF ITS TITLE 2 GANGLIOSIDE RECEPTOR GT1B CAVEAT 1FV2 SLB B 6 HAS WRONG CHIRALITY AT ATOM C8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETANUS TOXIN HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN OF HEAVY CHAIN; COMPND 5 EC: 3.4.24.68; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM TETANI; SOURCE 3 ORGANISM_TAXID: 1513; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS TOXIN, CARBOHYDRATE, GANGLIOSIDE, MULTI-VALENT BINDING, RECEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR C.FOTINOU,P.EMSLEY,I.BLACK,H.ANDO,H.ISHIDA,M.KISO,K.A.SINHA, AUTHOR 2 N.F.FAIRWEATHER,N.W.ISAACS REVDAT 5 20-NOV-24 1FV2 1 HETSYN REVDAT 4 29-JUL-20 1FV2 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 15-JUN-11 1FV2 1 REMARK REVDAT 2 24-FEB-09 1FV2 1 VERSN REVDAT 1 05-SEP-01 1FV2 0 JRNL AUTH C.FOTINOU,P.EMSLEY,I.BLACK,H.ANDO,H.ISHIDA,M.KISO,K.A.SINHA, JRNL AUTH 2 N.F.FAIRWEATHER,N.W.ISAACS JRNL TITL THE CRYSTAL STRUCTURE OF TETANUS TOXIN HC FRAGMENT COMPLEXED JRNL TITL 2 WITH A SYNTHETIC GT1B ANALOGUE SUGGESTS CROSS-LINKING JRNL TITL 3 BETWEEN GANGLIOSIDE RECEPTORS AND THE TOXIN. JRNL REF J.BIOL.CHEM. V. 276 32274 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11418600 JRNL DOI 10.1074/JBC.M103285200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.EMSLEY,C.FOTINOU,I.BLACK,N.F.FAIRWEATHER,I.G.CHARLES, REMARK 1 AUTH 2 C.WATTS,E.HEWITT,N.W.ISAACS REMARK 1 TITL THE STRUCTURES OF THE HC FRAGMENT OF TETANUS TOXIN WITH REMARK 1 TITL 2 CARBOHYDRATE SUBUNIT COMPLEXES PROVIDE INSIGHT INTO REMARK 1 TITL 3 GANGLIOSIDE BINDING REMARK 1 REF J.BIOL.CHEM. V. 275 8889 2000 REMARK 1 REFN ISSN 0021-9258 REMARK 1 DOI 10.1074/JBC.275.12.8889 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.C.UMLAND,L.M.WINGERT,S.SWAMINATHAN,W.F.FUREY,J.J.SCHMIDT, REMARK 1 AUTH 2 M.SAX REMARK 1 TITL STRUCTURE OF THE RECEPTOR BINDING FRAGMENT HC OF TETANUS REMARK 1 TITL 2 NEUROTOXIN REMARK 1 REF NAT.STRUCT.BIOL. V. 4 788 1997 REMARK 1 REFN ISSN 1072-8368 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 18502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 583 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 119 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 54.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.87000 REMARK 3 B22 (A**2) : 1.51000 REMARK 3 B33 (A**2) : -2.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.652 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.320 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.534 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.729 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 865 A 1110 REMARK 3 ORIGIN FOR THE GROUP (A): 45.6660 11.3419 41.2873 REMARK 3 T TENSOR REMARK 3 T11: 0.0157 T22: 0.0641 REMARK 3 T33: 0.0294 T12: 0.0162 REMARK 3 T13: 0.0031 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.8473 L22: 1.0405 REMARK 3 L33: 1.1744 L12: 0.3695 REMARK 3 L13: -0.0069 L23: 0.3502 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.0044 S13: 0.0036 REMARK 3 S21: -0.0046 S22: 0.0421 S23: -0.0484 REMARK 3 S31: -0.1460 S32: 0.0620 S33: -0.0176 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1111 A 1315 REMARK 3 ORIGIN FOR THE GROUP (A): 36.3936 -11.3035 14.7595 REMARK 3 T TENSOR REMARK 3 T11: 0.0562 T22: 0.0467 REMARK 3 T33: 0.0002 T12: 0.0331 REMARK 3 T13: -0.0036 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.0198 L22: 0.7470 REMARK 3 L33: 1.9533 L12: 0.2306 REMARK 3 L13: -0.0536 L23: 0.5138 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: 0.0829 S13: -0.0485 REMARK 3 S21: -0.1237 S22: 0.0289 S23: -0.0811 REMARK 3 S31: 0.0590 S32: 0.0089 S33: -0.0179 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FV2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-00. REMARK 100 THE DEPOSITION ID IS D_1000011924. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-99 REMARK 200 TEMPERATURE (KELVIN) : 100.00 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19104 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% POLYETHYLENE GLYCOL 8000, SODIUM REMARK 280 -POTASSIUM PHOSPHATE, TRIS, IMIDAZOLE, SODIUM CHLORIDE, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.08600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 844 REMARK 465 GLY A 845 REMARK 465 SER A 846 REMARK 465 SER A 847 REMARK 465 HIS A 848 REMARK 465 HIS A 849 REMARK 465 HIS A 850 REMARK 465 HIS A 851 REMARK 465 HIS A 852 REMARK 465 HIS A 853 REMARK 465 SER A 854 REMARK 465 SER A 855 REMARK 465 GLY A 856 REMARK 465 LEU A 857 REMARK 465 VAL A 858 REMARK 465 PRO A 859 REMARK 465 ARG A 860 REMARK 465 GLY A 861 REMARK 465 SER A 862 REMARK 465 HIS A 863 REMARK 465 MET A 864 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O8 SLB B 6 C1 SIA B 7 1.94 REMARK 500 O3 GAL B 4 O6 SIA B 5 2.13 REMARK 500 O8 SLB B 6 O6 SIA B 7 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 890 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 894 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 911 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A1039 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A1067 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A1147 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 866 -151.63 -91.72 REMARK 500 TRP A 870 130.56 -10.14 REMARK 500 ASP A 872 -102.23 -7.17 REMARK 500 ASP A 876 161.62 -40.65 REMARK 500 LEU A 887 133.72 -177.65 REMARK 500 ASN A 919 55.04 -158.82 REMARK 500 ASN A 927 74.96 -101.12 REMARK 500 TYR A 943 -63.96 -95.70 REMARK 500 ASN A 944 -74.52 21.23 REMARK 500 SER A 979 89.32 -153.00 REMARK 500 ASN A 998 42.81 -104.64 REMARK 500 ALA A1008 1.19 -68.74 REMARK 500 LEU A1027 46.96 -105.66 REMARK 500 ALA A1028 48.43 -144.43 REMARK 500 ASN A1029 7.61 92.77 REMARK 500 ARG A1040 39.64 -66.56 REMARK 500 LEU A1041 -19.49 -150.92 REMARK 500 SER A1042 -66.95 -137.28 REMARK 500 ARG A1076 32.67 73.41 REMARK 500 LEU A1109 34.42 -91.06 REMARK 500 SER A1110 151.86 -35.15 REMARK 500 THR A1112 -56.69 -177.81 REMARK 500 THR A1146 -11.07 64.71 REMARK 500 ASP A1147 -159.10 -97.89 REMARK 500 ASN A1184 -179.01 84.50 REMARK 500 LYS A1213 -68.09 -26.68 REMARK 500 ALA A1217 108.80 -161.01 REMARK 500 ASN A1220 2.82 51.76 REMARK 500 PRO A1232 -76.45 -33.05 REMARK 500 LEU A1248 -36.61 -34.82 REMARK 500 LEU A1294 -19.05 -43.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D0H RELATED DB: PDB REMARK 900 1D0H CONTAINS THE SAME PROTEIN COMPLEXED WITH N-ACETYL-GALACTOSAMINE REMARK 900 RELATED ID: 1DLL RELATED DB: PDB REMARK 900 1DLL CONTAINS THE SAME PROTEIN COMPLEXED WITH LACTOSE REMARK 900 RELATED ID: 1DIW RELATED DB: PDB REMARK 900 1DIW CONTAINS THE SAME PROTEIN COMPLEXED WITH GALACTOSE REMARK 900 RELATED ID: 1DFQ RELATED DB: PDB REMARK 900 1DFQ CONTAINS THE SAME PROTEIN COMPLEXED WITH SIALIC ACID REMARK 900 RELATED ID: 1AF9 RELATED DB: PDB REMARK 900 1AF9 CONTAINS THE STRUCTURE OF THE HC FRAGMENT TO 2.7A REMARK 900 RELATED ID: 1A8D RELATED DB: PDB REMARK 900 1A8D CONTAINS THE STRUCTURE OF THE HC FRAGMENT TO 1.57A REMARK 900 RELATED ID: 1FV3 RELATED DB: PDB DBREF 1FV2 A 865 1315 UNP P04958 TETX_CLOTE 864 1314 SEQADV 1FV2 MET A 844 P04958 SEE REMARK 999 SEQADV 1FV2 GLY A 845 P04958 SEE REMARK 999 SEQADV 1FV2 SER A 846 P04958 SEE REMARK 999 SEQADV 1FV2 SER A 847 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 848 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 849 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 850 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 851 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 852 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 853 P04958 SEE REMARK 999 SEQADV 1FV2 SER A 854 P04958 SEE REMARK 999 SEQADV 1FV2 SER A 855 P04958 SEE REMARK 999 SEQADV 1FV2 GLY A 856 P04958 SEE REMARK 999 SEQADV 1FV2 LEU A 857 P04958 SEE REMARK 999 SEQADV 1FV2 VAL A 858 P04958 SEE REMARK 999 SEQADV 1FV2 PRO A 859 P04958 SEE REMARK 999 SEQADV 1FV2 ARG A 860 P04958 SEE REMARK 999 SEQADV 1FV2 GLY A 861 P04958 SEE REMARK 999 SEQADV 1FV2 SER A 862 P04958 SEE REMARK 999 SEQADV 1FV2 HIS A 863 P04958 SEE REMARK 999 SEQADV 1FV2 MET A 864 P04958 SEE REMARK 999 SEQRES 1 A 472 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 472 LEU VAL PRO ARG GLY SER HIS MET LYS ASN LEU ASP CYS SEQRES 3 A 472 TRP VAL ASP ASN GLU GLU ASP ILE ASP VAL ILE LEU LYS SEQRES 4 A 472 LYS SER THR ILE LEU ASN LEU ASP ILE ASN ASN ASP ILE SEQRES 5 A 472 ILE SER ASP ILE SER GLY PHE ASN SER SER VAL ILE THR SEQRES 6 A 472 TYR PRO ASP ALA GLN LEU VAL PRO GLY ILE ASN GLY LYS SEQRES 7 A 472 ALA ILE HIS LEU VAL ASN ASN GLU SER SER GLU VAL ILE SEQRES 8 A 472 VAL HIS LYS ALA MET ASP ILE GLU TYR ASN ASP MET PHE SEQRES 9 A 472 ASN ASN PHE THR VAL SER PHE TRP LEU ARG VAL PRO LYS SEQRES 10 A 472 VAL SER ALA SER HIS LEU GLU GLN TYR GLY THR ASN GLU SEQRES 11 A 472 TYR SER ILE ILE SER SER MET LYS LYS HIS SER LEU SER SEQRES 12 A 472 ILE GLY SER GLY TRP SER VAL SER LEU LYS GLY ASN ASN SEQRES 13 A 472 LEU ILE TRP THR LEU LYS ASP SER ALA GLY GLU VAL ARG SEQRES 14 A 472 GLN ILE THR PHE ARG ASP LEU PRO ASP LYS PHE ASN ALA SEQRES 15 A 472 TYR LEU ALA ASN LYS TRP VAL PHE ILE THR ILE THR ASN SEQRES 16 A 472 ASP ARG LEU SER SER ALA ASN LEU TYR ILE ASN GLY VAL SEQRES 17 A 472 LEU MET GLY SER ALA GLU ILE THR GLY LEU GLY ALA ILE SEQRES 18 A 472 ARG GLU ASP ASN ASN ILE THR LEU LYS LEU ASP ARG CYS SEQRES 19 A 472 ASN ASN ASN ASN GLN TYR VAL SER ILE ASP LYS PHE ARG SEQRES 20 A 472 ILE PHE CYS LYS ALA LEU ASN PRO LYS GLU ILE GLU LYS SEQRES 21 A 472 LEU TYR THR SER TYR LEU SER ILE THR PHE LEU ARG ASP SEQRES 22 A 472 PHE TRP GLY ASN PRO LEU ARG TYR ASP THR GLU TYR TYR SEQRES 23 A 472 LEU ILE PRO VAL ALA SER SER SER LYS ASP VAL GLN LEU SEQRES 24 A 472 LYS ASN ILE THR ASP TYR MET TYR LEU THR ASN ALA PRO SEQRES 25 A 472 SER TYR THR ASN GLY LYS LEU ASN ILE TYR TYR ARG ARG SEQRES 26 A 472 LEU TYR ASN GLY LEU LYS PHE ILE ILE LYS ARG TYR THR SEQRES 27 A 472 PRO ASN ASN GLU ILE ASP SER PHE VAL LYS SER GLY ASP SEQRES 28 A 472 PHE ILE LYS LEU TYR VAL SER TYR ASN ASN ASN GLU HIS SEQRES 29 A 472 ILE VAL GLY TYR PRO LYS ASP GLY ASN ALA PHE ASN ASN SEQRES 30 A 472 LEU ASP ARG ILE LEU ARG VAL GLY TYR ASN ALA PRO GLY SEQRES 31 A 472 ILE PRO LEU TYR LYS LYS MET GLU ALA VAL LYS LEU ARG SEQRES 32 A 472 ASP LEU LYS THR TYR SER VAL GLN LEU LYS LEU TYR ASP SEQRES 33 A 472 ASP LYS ASN ALA SER LEU GLY LEU VAL GLY THR HIS ASN SEQRES 34 A 472 GLY GLN ILE GLY ASN ASP PRO ASN ARG ASP ILE LEU ILE SEQRES 35 A 472 ALA SER ASN TRP TYR PHE ASN HIS LEU LYS ASP LYS ILE SEQRES 36 A 472 LEU GLY CYS ASP TRP TYR PHE VAL PRO THR ASP GLU GLY SEQRES 37 A 472 TRP THR ASN ASP HET BGC B 1 12 HET GAL B 2 11 HET NGA B 3 14 HET GAL B 4 11 HET SIA B 5 20 HET SLB B 6 20 HET SIA B 7 20 HET PO4 A 201 5 HET CEQ A 8 12 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM SLB N-ACETYL-BETA-NEURAMINIC ACID HETNAM PO4 PHOSPHATE ION HETNAM CEQ ETHYL-TRIMETHYL-SILANE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID HETSYN SLB N-ACETYLNEURAMINIC ACID; SIALIC ACID; O-SIALIC ACID; 5- HETSYN 2 SLB N-ACETYL-BETA-D-NEURAMINIC ACID; BETA-SIALIC ACID FORMUL 2 BGC C6 H12 O6 FORMUL 2 GAL 2(C6 H12 O6) FORMUL 2 NGA C8 H15 N O6 FORMUL 2 SIA 2(C11 H19 N O9) FORMUL 2 SLB C11 H19 N O9 FORMUL 3 PO4 O4 P 3- FORMUL 4 CEQ C5 H14 SI FORMUL 5 HOH *120(H2 O) HELIX 1 1 ASP A 876 SER A 884 1 9 HELIX 2 2 TYR A 943 PHE A 947 5 5 HELIX 3 3 SER A 962 GLY A 970 1 9 HELIX 4 4 ASN A 1097 SER A 1107 1 11 HELIX 5 5 ALA A 1134 SER A 1136 5 3 HELIX 6 6 ASN A 1219 LEU A 1221 5 3 HELIX 7 7 ASN A 1288 HIS A 1293 5 6 SHEET 1 A11 ILE A 895 ASP A 898 0 SHEET 2 A11 THR A 885 ASN A 892 -1 O ASP A 890 N SER A 897 SHEET 3 A11 VAL A1084 PHE A1092 -1 O PHE A1089 N LEU A 889 SHEET 4 A11 LYS A 921 LEU A 925 -1 O ILE A 923 N ILE A1086 SHEET 5 A11 ALA A 912 PRO A 916 -1 O GLN A 913 N HIS A 924 SHEET 6 A11 LYS A 921 LEU A 925 -1 N ALA A 922 O VAL A 915 SHEET 7 A11 VAL A1084 PHE A1092 -1 O VAL A1084 N LEU A 925 SHEET 8 A11 PHE A 950 ARG A 957 -1 O THR A 951 N PHE A1092 SHEET 9 A11 VAL A1032 ASN A1038 -1 O VAL A1032 N LEU A 956 SHEET 10 A11 SER A1043 ILE A1048 -1 O ASN A1045 N THR A1037 SHEET 11 A11 VAL A1051 GLU A1057 -1 N VAL A1051 O ILE A1048 SHEET 1 B 7 SER A 904 THR A 908 0 SHEET 2 B 7 GLU A 932 LYS A 937 -1 O ILE A 934 N ILE A 907 SHEET 3 B 7 ASN A1069 ASP A1075 -1 N ILE A1070 O VAL A 935 SHEET 4 B 7 TYR A 974 LYS A 982 -1 O SER A 975 N ASP A1075 SHEET 5 B 7 ILE A 987 LEU A 995 -1 N GLY A 988 O LYS A 981 SHEET 6 B 7 ASN A 999 LYS A1005 -1 N ILE A1001 O SER A 994 SHEET 7 B 7 VAL A1011 ARG A1017 -1 O ARG A1012 N LEU A1004 SHEET 1 C 2 TYR A1129 PRO A1132 0 SHEET 2 C 2 TRP A1303 VAL A1306 -1 N TYR A1304 O ILE A1131 SHEET 1 D 2 LYS A1138 LEU A1142 0 SHEET 2 D 2 MET A1149 ASN A1153 -1 O TYR A1150 N GLN A1141 SHEET 1 E 2 SER A1156 ASN A1159 0 SHEET 2 E 2 ILE A1164 ARG A1167 -1 O ILE A1164 N ASN A1159 SHEET 1 F 8 LYS A1174 ARG A1179 0 SHEET 2 F 8 ASP A1194 SER A1201 -1 N LYS A1197 O LYS A1178 SHEET 3 F 8 LYS A1239 VAL A1243 -1 O MET A1240 N ILE A1196 SHEET 4 F 8 GLN A1254 TYR A1258 -1 O GLN A1254 N VAL A1243 SHEET 5 F 8 SER A1264 GLY A1273 -1 N LEU A1265 O LEU A1257 SHEET 6 F 8 ARG A1281 SER A1287 -1 N ARG A1281 O GLY A1273 SHEET 7 F 8 ASP A1222 ILE A1224 -1 O ARG A1223 N ALA A1286 SHEET 8 F 8 ALA A1217 PHE A1218 -1 O PHE A1218 N ASP A1222 SHEET 1 G 6 LYS A1174 ARG A1179 0 SHEET 2 G 6 ASP A1194 SER A1201 -1 N LYS A1197 O LYS A1178 SHEET 3 G 6 GLU A1206 PRO A1212 -1 N HIS A1207 O VAL A1200 SHEET 4 G 6 LEU A1236 TYR A1237 -1 N TYR A1237 O TYR A1211 SHEET 5 G 6 GLU A1206 PRO A1212 -1 O TYR A1211 N TYR A1237 SHEET 6 G 6 ARG A1226 VAL A1227 -1 O ARG A1226 N GLY A1210 SSBOND 1 CYS A 869 CYS A 1093 1555 1555 2.03 LINK C6 ACEQ A 8 O1 BGC B 1 1555 1555 1.36 LINK C6 BCEQ A 8 O1 BGC B 1 1555 1555 1.34 LINK O4 BGC B 1 C1 GAL B 2 1555 1555 1.41 LINK O4 GAL B 2 C1 NGA B 3 1555 1555 1.45 LINK O3 GAL B 2 C2 SLB B 6 1555 1555 1.42 LINK O3 NGA B 3 C1 GAL B 4 1555 1555 1.42 LINK O3 GAL B 4 C2 SIA B 5 1555 1555 1.65 LINK O8 SLB B 6 C2 SIA B 7 1555 1555 1.50 CRYST1 45.849 52.172 117.353 90.00 99.55 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021810 0.000000 0.003670 0.00000 SCALE2 0.000000 0.019170 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008640 0.00000