HEADER BLOOD COAGULATION INHIBITOR 06-SEP-95 1FVL TITLE THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF FLAVORIDIN, AN TITLE 2 ANTAGONIST OF THE PLATELET GP IIB-IIIA RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVORIDIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRIMERESURUS FLAVOVIRIDIS; SOURCE 3 ORGANISM_TAXID: 88087; SOURCE 4 ORGAN: BLOOD KEYWDS GP IIB/IIIA ANTAGONIST, BLOOD COAGULATION INHIBITOR EXPDTA SOLUTION NMR NUMMDL 18 AUTHOR H.SENN,W.KLAUS REVDAT 3 23-FEB-22 1FVL 1 REMARK REVDAT 2 24-FEB-09 1FVL 1 VERSN REVDAT 1 29-JAN-96 1FVL 0 JRNL AUTH H.SENN,W.KLAUS JRNL TITL THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF JRNL TITL 2 FLAVORIDIN, AN ANTAGONIST OF THE PLATELET GP IIB-IIIA JRNL TITL 3 RECEPTOR. JRNL REF J.MOL.BIOL. V. 232 907 1993 JRNL REFN ISSN 0022-2836 JRNL PMID 8355277 JRNL DOI 10.1006/JMBI.1993.1439 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.KLAUS,C.BROGER,P.GERBER,H.SENN REMARK 1 TITL DETERMINATION OF THE DISULPHIDE BONDING PATTERN IN PROTEINS REMARK 1 TITL 2 BY LOCAL AND GLOBAL ANALYSIS OF NUCLEAR MAGNETIC RESONANCE REMARK 1 TITL 3 DATA: APPLICATION TO FLAVORIDIN REMARK 1 REF J.MOL.BIOL. V. 232 897 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FVL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173438. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 3 25.82 -144.18 REMARK 500 1 ASP A 5 48.50 -164.21 REMARK 500 1 ALA A 28 -60.06 -96.32 REMARK 500 1 CYS A 36 -35.06 157.39 REMARK 500 1 LEU A 60 27.79 -148.52 REMARK 500 2 GLU A 3 -179.42 59.83 REMARK 500 2 ASP A 15 -162.53 58.20 REMARK 500 2 ALA A 17 -59.57 -168.85 REMARK 500 2 THR A 18 29.47 -155.35 REMARK 500 2 CYS A 36 -32.25 154.74 REMARK 500 2 ARG A 42 -2.80 92.34 REMARK 500 2 ARG A 49 74.03 -103.62 REMARK 500 2 ASN A 68 108.27 -161.80 REMARK 500 3 GLU A 3 70.36 54.66 REMARK 500 3 ASP A 5 56.22 -152.00 REMARK 500 3 THR A 18 64.76 -166.50 REMARK 500 3 CYS A 19 -32.52 -35.85 REMARK 500 3 GLN A 35 48.53 31.68 REMARK 500 3 CYS A 36 -51.77 165.28 REMARK 500 3 LYS A 41 177.73 -58.47 REMARK 500 3 ASP A 51 40.70 -97.24 REMARK 500 3 THR A 58 -66.94 -99.81 REMARK 500 3 ASP A 69 83.88 51.10 REMARK 500 4 ASP A 5 27.37 -145.04 REMARK 500 4 ALA A 16 71.01 24.98 REMARK 500 4 ALA A 17 -63.40 -158.24 REMARK 500 4 GLN A 26 23.37 -146.33 REMARK 500 4 GLN A 35 57.81 31.03 REMARK 500 4 LEU A 60 39.05 -142.22 REMARK 500 5 GLU A 3 -179.59 62.40 REMARK 500 5 CYS A 4 120.56 66.74 REMARK 500 5 SER A 10 40.86 -96.57 REMARK 500 5 ALA A 17 -57.69 -153.95 REMARK 500 5 CYS A 19 -0.60 75.96 REMARK 500 5 CYS A 27 -178.07 -170.80 REMARK 500 5 LEU A 31 6.40 59.08 REMARK 500 5 CYS A 32 25.93 -151.25 REMARK 500 5 CYS A 36 40.04 171.73 REMARK 500 5 ARG A 37 -174.64 -176.71 REMARK 500 5 ASP A 51 41.13 -96.12 REMARK 500 6 ASP A 15 -173.65 59.11 REMARK 500 6 ALA A 17 -58.04 -153.64 REMARK 500 6 THR A 18 31.61 -160.66 REMARK 500 6 CYS A 19 -40.20 79.77 REMARK 500 6 ALA A 28 -55.13 -127.69 REMARK 500 6 GLN A 35 45.97 -82.54 REMARK 500 6 CYS A 36 -39.55 171.80 REMARK 500 6 ARG A 42 35.28 87.55 REMARK 500 6 ASP A 51 43.73 -104.48 REMARK 500 7 GLU A 2 99.29 -64.17 REMARK 500 REMARK 500 THIS ENTRY HAS 164 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 49 0.08 SIDE CHAIN REMARK 500 2 ARG A 22 0.08 SIDE CHAIN REMARK 500 2 ARG A 37 0.11 SIDE CHAIN REMARK 500 2 ARG A 56 0.10 SIDE CHAIN REMARK 500 3 ARG A 22 0.08 SIDE CHAIN REMARK 500 5 ARG A 37 0.08 SIDE CHAIN REMARK 500 5 ARG A 46 0.09 SIDE CHAIN REMARK 500 6 ARG A 49 0.09 SIDE CHAIN REMARK 500 7 ARG A 37 0.10 SIDE CHAIN REMARK 500 7 ARG A 46 0.08 SIDE CHAIN REMARK 500 9 ARG A 46 0.13 SIDE CHAIN REMARK 500 9 ARG A 49 0.12 SIDE CHAIN REMARK 500 10 ARG A 56 0.10 SIDE CHAIN REMARK 500 11 ARG A 46 0.08 SIDE CHAIN REMARK 500 11 ARG A 56 0.15 SIDE CHAIN REMARK 500 12 ARG A 42 0.12 SIDE CHAIN REMARK 500 13 ARG A 22 0.08 SIDE CHAIN REMARK 500 13 ARG A 49 0.10 SIDE CHAIN REMARK 500 15 ARG A 22 0.14 SIDE CHAIN REMARK 500 16 ARG A 22 0.11 SIDE CHAIN REMARK 500 18 ARG A 22 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1FVL A 1 70 UNP P18619 DISF_TRIFL 1 70 SEQRES 1 A 70 GLY GLU GLU CYS ASP CYS GLY SER PRO SER ASN PRO CYS SEQRES 2 A 70 CYS ASP ALA ALA THR CYS LYS LEU ARG PRO GLY ALA GLN SEQRES 3 A 70 CYS ALA ASP GLY LEU CYS CYS ASP GLN CYS ARG PHE LYS SEQRES 4 A 70 LYS LYS ARG THR ILE CYS ARG ILE ALA ARG GLY ASP PHE SEQRES 5 A 70 PRO ASP ASP ARG CYS THR GLY LEU SER ASN ASP CYS PRO SEQRES 6 A 70 ARG TRP ASN ASP LEU SHEET 1 A 2 CYS A 14 ASP A 15 0 SHEET 2 A 2 LYS A 20 LEU A 21 -1 O LYS A 20 N ASP A 15 SHEET 1 B 2 ILE A 44 ARG A 46 0 SHEET 2 B 2 ASP A 55 ARG A 56 -1 N ASP A 55 O ARG A 46 SSBOND 1 CYS A 4 CYS A 19 1555 1555 2.09 SSBOND 2 CYS A 6 CYS A 14 1555 1555 2.05 SSBOND 3 CYS A 13 CYS A 36 1555 1555 2.02 SSBOND 4 CYS A 27 CYS A 33 1555 1555 2.01 SSBOND 5 CYS A 32 CYS A 57 1555 1555 2.05 SSBOND 6 CYS A 45 CYS A 64 1555 1555 1.95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1