HEADER TRANSFERASE 22-SEP-00 1FWK TITLE CRYSTAL STRUCTURE OF HOMOSERINE KINASE COMPLEXED WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMOSERINE KINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HK; COMPND 5 EC: 2.7.1.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 2190; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.ZHOU,M.DAUGHERTY,N.V.GRISHIN,A.L.OSTERMAN,H.ZHANG REVDAT 4 07-FEB-24 1FWK 1 REMARK LINK REVDAT 3 04-OCT-17 1FWK 1 REMARK REVDAT 2 24-FEB-09 1FWK 1 VERSN REVDAT 1 20-DEC-00 1FWK 0 JRNL AUTH T.ZHOU,M.DAUGHERTY,N.V.GRISHIN,A.L.OSTERMAN,H.ZHANG JRNL TITL STRUCTURE AND MECHANISM OF HOMOSERINE KINASE: PROTOTYPE FOR JRNL TITL 2 THE GHMP KINASE SUPERFAMILY. JRNL REF STRUCTURE FOLD.DES. V. 8 1247 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11188689 JRNL DOI 10.1016/S0969-2126(00)00533-5 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBE REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 96677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4832 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9076 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 109 REMARK 3 SOLVENT ATOMS : 596 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : 0.013 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-00. REMARK 100 THE DEPOSITION ID IS D_1000011958. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96677 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.02600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, SODIUM ACETATE, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 64.57350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER: CHAIN A AND B OR CHAIN REMARK 300 C AND D IN THE ASYMMERIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 95.03952 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 64.57350 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 105.77036 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 8 O HOH A 663 2.11 REMARK 500 OG SER D 134 O HOH D 996 2.12 REMARK 500 O HOH D 912 O HOH D 1019 2.12 REMARK 500 O HOH C 837 O HOH C 901 2.16 REMARK 500 O ARG D 282 O TYR D 285 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 158 C - N - CA ANGL. DEV. = 14.7 DEGREES REMARK 500 PRO D 158 C - N - CD ANGL. DEV. = -16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 17 -57.07 78.93 REMARK 500 VAL A 24 -57.23 -120.77 REMARK 500 LYS A 44 71.20 -64.72 REMARK 500 LYS A 137 9.68 -59.10 REMARK 500 HIS A 138 130.74 -28.66 REMARK 500 GLU A 157 92.94 -161.54 REMARK 500 ASN A 178 54.56 -90.57 REMARK 500 ASN B 17 -63.03 85.92 REMARK 500 PHE B 22 124.66 -36.43 REMARK 500 VAL B 24 -53.61 -126.48 REMARK 500 ASP B 43 170.41 -53.84 REMARK 500 LYS B 44 43.19 -100.90 REMARK 500 ASP B 52 82.03 63.07 REMARK 500 LYS B 53 34.47 -64.40 REMARK 500 PRO B 56 123.17 -38.60 REMARK 500 LYS B 69 -72.62 -60.49 REMARK 500 LYS B 70 -28.32 -38.55 REMARK 500 ASN B 76 68.70 39.36 REMARK 500 PHE B 113 46.40 -100.36 REMARK 500 LYS B 114 -10.94 66.94 REMARK 500 SER B 134 -3.54 -147.15 REMARK 500 ASN B 155 139.83 -174.66 REMARK 500 ALA B 186 47.90 -86.29 REMARK 500 PRO B 191 152.07 -44.21 REMARK 500 THR B 291 -156.41 -146.93 REMARK 500 ASN C 17 -59.72 80.98 REMARK 500 VAL C 24 -57.37 -121.95 REMARK 500 LYS C 44 67.96 -67.13 REMARK 500 ASN C 155 145.03 -172.64 REMARK 500 ASN C 178 55.68 -94.24 REMARK 500 ARG C 187 35.09 -92.87 REMARK 500 LYS C 250 -62.44 -19.74 REMARK 500 THR C 291 -158.53 -150.22 REMARK 500 ASN D 17 -62.34 86.77 REMARK 500 VAL D 24 -61.08 -128.25 REMARK 500 LYS D 44 21.17 -66.43 REMARK 500 PRO D 56 172.82 -51.30 REMARK 500 ASN D 76 59.17 34.10 REMARK 500 ALA D 136 147.37 164.78 REMARK 500 ASN D 155 147.32 -173.21 REMARK 500 GLU D 157 79.98 -116.84 REMARK 500 ASN D 178 48.91 -80.45 REMARK 500 LYS D 250 -55.53 -26.08 REMARK 500 THR D 291 -154.47 -143.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 597 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 134 OG REMARK 620 2 ADP D 900 O2A 115.6 REMARK 620 3 HOH D 996 O 48.8 84.7 REMARK 620 4 HOH D1007 O 55.2 153.8 99.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 597 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP C 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP D 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FWL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HOMOSERINE KINASE DBREF 1FWK A 5 300 UNP Q58504 KHSE_METJA 5 300 DBREF 1FWK B 5 300 UNP Q58504 KHSE_METJA 5 300 DBREF 1FWK C 5 300 UNP Q58504 KHSE_METJA 5 300 DBREF 1FWK D 5 300 UNP Q58504 KHSE_METJA 5 300 SEQRES 1 A 296 MET LYS VAL ARG VAL LYS ALA PRO CYS THR SER ALA ASN SEQRES 2 A 296 LEU GLY VAL GLY PHE ASP VAL PHE GLY LEU CYS LEU LYS SEQRES 3 A 296 GLU PRO TYR ASP VAL ILE GLU VAL GLU ALA ILE ASP ASP SEQRES 4 A 296 LYS GLU ILE ILE ILE GLU VAL ASP ASP LYS ASN ILE PRO SEQRES 5 A 296 THR ASP PRO ASP LYS ASN VAL ALA GLY ILE VAL ALA LYS SEQRES 6 A 296 LYS MET ILE ASP ASP PHE ASN ILE GLY LYS GLY VAL LYS SEQRES 7 A 296 ILE THR ILE LYS LYS GLY VAL LYS ALA GLY SER GLY LEU SEQRES 8 A 296 GLY SER SER ALA ALA SER SER ALA GLY THR ALA TYR ALA SEQRES 9 A 296 ILE ASN GLU LEU PHE LYS LEU ASN LEU ASP LYS LEU LYS SEQRES 10 A 296 LEU VAL ASP TYR ALA SER TYR GLY GLU LEU ALA SER SER SEQRES 11 A 296 GLY ALA LYS HIS ALA ASP ASN VAL ALA PRO ALA ILE PHE SEQRES 12 A 296 GLY GLY PHE THR MET VAL THR ASN TYR GLU PRO LEU GLU SEQRES 13 A 296 VAL LEU HIS ILE PRO ILE ASP PHE LYS LEU ASP ILE LEU SEQRES 14 A 296 ILE ALA ILE PRO ASN ILE SER ILE ASN THR LYS GLU ALA SEQRES 15 A 296 ARG GLU ILE LEU PRO LYS ALA VAL GLY LEU LYS ASP LEU SEQRES 16 A 296 VAL ASN ASN VAL GLY LYS ALA CYS GLY MET VAL TYR ALA SEQRES 17 A 296 LEU TYR ASN LYS ASP LYS SER LEU PHE GLY ARG TYR MET SEQRES 18 A 296 MET SER ASP LYS VAL ILE GLU PRO VAL ARG GLY LYS LEU SEQRES 19 A 296 ILE PRO ASN TYR PHE LYS ILE LYS GLU GLU VAL LYS ASP SEQRES 20 A 296 LYS VAL TYR GLY ILE THR ILE SER GLY SER GLY PRO SER SEQRES 21 A 296 ILE ILE ALA PHE PRO LYS GLU GLU PHE ILE ASP GLU VAL SEQRES 22 A 296 GLU ASN ILE LEU ARG ASP TYR TYR GLU ASN THR ILE ARG SEQRES 23 A 296 THR GLU VAL GLY LYS GLY VAL GLU VAL VAL SEQRES 1 B 296 MET LYS VAL ARG VAL LYS ALA PRO CYS THR SER ALA ASN SEQRES 2 B 296 LEU GLY VAL GLY PHE ASP VAL PHE GLY LEU CYS LEU LYS SEQRES 3 B 296 GLU PRO TYR ASP VAL ILE GLU VAL GLU ALA ILE ASP ASP SEQRES 4 B 296 LYS GLU ILE ILE ILE GLU VAL ASP ASP LYS ASN ILE PRO SEQRES 5 B 296 THR ASP PRO ASP LYS ASN VAL ALA GLY ILE VAL ALA LYS SEQRES 6 B 296 LYS MET ILE ASP ASP PHE ASN ILE GLY LYS GLY VAL LYS SEQRES 7 B 296 ILE THR ILE LYS LYS GLY VAL LYS ALA GLY SER GLY LEU SEQRES 8 B 296 GLY SER SER ALA ALA SER SER ALA GLY THR ALA TYR ALA SEQRES 9 B 296 ILE ASN GLU LEU PHE LYS LEU ASN LEU ASP LYS LEU LYS SEQRES 10 B 296 LEU VAL ASP TYR ALA SER TYR GLY GLU LEU ALA SER SER SEQRES 11 B 296 GLY ALA LYS HIS ALA ASP ASN VAL ALA PRO ALA ILE PHE SEQRES 12 B 296 GLY GLY PHE THR MET VAL THR ASN TYR GLU PRO LEU GLU SEQRES 13 B 296 VAL LEU HIS ILE PRO ILE ASP PHE LYS LEU ASP ILE LEU SEQRES 14 B 296 ILE ALA ILE PRO ASN ILE SER ILE ASN THR LYS GLU ALA SEQRES 15 B 296 ARG GLU ILE LEU PRO LYS ALA VAL GLY LEU LYS ASP LEU SEQRES 16 B 296 VAL ASN ASN VAL GLY LYS ALA CYS GLY MET VAL TYR ALA SEQRES 17 B 296 LEU TYR ASN LYS ASP LYS SER LEU PHE GLY ARG TYR MET SEQRES 18 B 296 MET SER ASP LYS VAL ILE GLU PRO VAL ARG GLY LYS LEU SEQRES 19 B 296 ILE PRO ASN TYR PHE LYS ILE LYS GLU GLU VAL LYS ASP SEQRES 20 B 296 LYS VAL TYR GLY ILE THR ILE SER GLY SER GLY PRO SER SEQRES 21 B 296 ILE ILE ALA PHE PRO LYS GLU GLU PHE ILE ASP GLU VAL SEQRES 22 B 296 GLU ASN ILE LEU ARG ASP TYR TYR GLU ASN THR ILE ARG SEQRES 23 B 296 THR GLU VAL GLY LYS GLY VAL GLU VAL VAL SEQRES 1 C 296 MET LYS VAL ARG VAL LYS ALA PRO CYS THR SER ALA ASN SEQRES 2 C 296 LEU GLY VAL GLY PHE ASP VAL PHE GLY LEU CYS LEU LYS SEQRES 3 C 296 GLU PRO TYR ASP VAL ILE GLU VAL GLU ALA ILE ASP ASP SEQRES 4 C 296 LYS GLU ILE ILE ILE GLU VAL ASP ASP LYS ASN ILE PRO SEQRES 5 C 296 THR ASP PRO ASP LYS ASN VAL ALA GLY ILE VAL ALA LYS SEQRES 6 C 296 LYS MET ILE ASP ASP PHE ASN ILE GLY LYS GLY VAL LYS SEQRES 7 C 296 ILE THR ILE LYS LYS GLY VAL LYS ALA GLY SER GLY LEU SEQRES 8 C 296 GLY SER SER ALA ALA SER SER ALA GLY THR ALA TYR ALA SEQRES 9 C 296 ILE ASN GLU LEU PHE LYS LEU ASN LEU ASP LYS LEU LYS SEQRES 10 C 296 LEU VAL ASP TYR ALA SER TYR GLY GLU LEU ALA SER SER SEQRES 11 C 296 GLY ALA LYS HIS ALA ASP ASN VAL ALA PRO ALA ILE PHE SEQRES 12 C 296 GLY GLY PHE THR MET VAL THR ASN TYR GLU PRO LEU GLU SEQRES 13 C 296 VAL LEU HIS ILE PRO ILE ASP PHE LYS LEU ASP ILE LEU SEQRES 14 C 296 ILE ALA ILE PRO ASN ILE SER ILE ASN THR LYS GLU ALA SEQRES 15 C 296 ARG GLU ILE LEU PRO LYS ALA VAL GLY LEU LYS ASP LEU SEQRES 16 C 296 VAL ASN ASN VAL GLY LYS ALA CYS GLY MET VAL TYR ALA SEQRES 17 C 296 LEU TYR ASN LYS ASP LYS SER LEU PHE GLY ARG TYR MET SEQRES 18 C 296 MET SER ASP LYS VAL ILE GLU PRO VAL ARG GLY LYS LEU SEQRES 19 C 296 ILE PRO ASN TYR PHE LYS ILE LYS GLU GLU VAL LYS ASP SEQRES 20 C 296 LYS VAL TYR GLY ILE THR ILE SER GLY SER GLY PRO SER SEQRES 21 C 296 ILE ILE ALA PHE PRO LYS GLU GLU PHE ILE ASP GLU VAL SEQRES 22 C 296 GLU ASN ILE LEU ARG ASP TYR TYR GLU ASN THR ILE ARG SEQRES 23 C 296 THR GLU VAL GLY LYS GLY VAL GLU VAL VAL SEQRES 1 D 296 MET LYS VAL ARG VAL LYS ALA PRO CYS THR SER ALA ASN SEQRES 2 D 296 LEU GLY VAL GLY PHE ASP VAL PHE GLY LEU CYS LEU LYS SEQRES 3 D 296 GLU PRO TYR ASP VAL ILE GLU VAL GLU ALA ILE ASP ASP SEQRES 4 D 296 LYS GLU ILE ILE ILE GLU VAL ASP ASP LYS ASN ILE PRO SEQRES 5 D 296 THR ASP PRO ASP LYS ASN VAL ALA GLY ILE VAL ALA LYS SEQRES 6 D 296 LYS MET ILE ASP ASP PHE ASN ILE GLY LYS GLY VAL LYS SEQRES 7 D 296 ILE THR ILE LYS LYS GLY VAL LYS ALA GLY SER GLY LEU SEQRES 8 D 296 GLY SER SER ALA ALA SER SER ALA GLY THR ALA TYR ALA SEQRES 9 D 296 ILE ASN GLU LEU PHE LYS LEU ASN LEU ASP LYS LEU LYS SEQRES 10 D 296 LEU VAL ASP TYR ALA SER TYR GLY GLU LEU ALA SER SER SEQRES 11 D 296 GLY ALA LYS HIS ALA ASP ASN VAL ALA PRO ALA ILE PHE SEQRES 12 D 296 GLY GLY PHE THR MET VAL THR ASN TYR GLU PRO LEU GLU SEQRES 13 D 296 VAL LEU HIS ILE PRO ILE ASP PHE LYS LEU ASP ILE LEU SEQRES 14 D 296 ILE ALA ILE PRO ASN ILE SER ILE ASN THR LYS GLU ALA SEQRES 15 D 296 ARG GLU ILE LEU PRO LYS ALA VAL GLY LEU LYS ASP LEU SEQRES 16 D 296 VAL ASN ASN VAL GLY LYS ALA CYS GLY MET VAL TYR ALA SEQRES 17 D 296 LEU TYR ASN LYS ASP LYS SER LEU PHE GLY ARG TYR MET SEQRES 18 D 296 MET SER ASP LYS VAL ILE GLU PRO VAL ARG GLY LYS LEU SEQRES 19 D 296 ILE PRO ASN TYR PHE LYS ILE LYS GLU GLU VAL LYS ASP SEQRES 20 D 296 LYS VAL TYR GLY ILE THR ILE SER GLY SER GLY PRO SER SEQRES 21 D 296 ILE ILE ALA PHE PRO LYS GLU GLU PHE ILE ASP GLU VAL SEQRES 22 D 296 GLU ASN ILE LEU ARG ASP TYR TYR GLU ASN THR ILE ARG SEQRES 23 D 296 THR GLU VAL GLY LYS GLY VAL GLU VAL VAL HET ADP A 600 27 HET ADP B 700 27 HET ADP C 800 27 HET MG D 597 1 HET ADP D 900 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 5 ADP 4(C10 H15 N5 O10 P2) FORMUL 8 MG MG 2+ FORMUL 10 HOH *596(H2 O) HELIX 1 1 ASN A 62 ASN A 76 1 15 HELIX 2 2 GLY A 96 PHE A 113 1 18 HELIX 3 3 ASP A 118 GLY A 135 1 18 HELIX 4 4 ASN A 141 GLY A 148 1 8 HELIX 5 5 ASN A 182 LEU A 190 1 9 HELIX 6 6 LEU A 196 ASN A 215 1 20 HELIX 7 7 ASP A 217 MET A 226 1 10 HELIX 8 8 ILE A 231 LYS A 237 1 7 HELIX 9 9 ASN A 241 VAL A 249 1 9 HELIX 10 10 PHE A 273 TYR A 285 1 13 HELIX 11 11 LEU B 18 PHE B 22 5 5 HELIX 12 12 ASN B 62 ASN B 76 1 15 HELIX 13 13 GLY B 96 PHE B 113 1 18 HELIX 14 14 ASP B 118 ALA B 132 1 15 HELIX 15 15 HIS B 138 GLY B 148 1 11 HELIX 16 16 LYS B 184 GLU B 188 5 5 HELIX 17 17 LEU B 196 ASN B 215 1 20 HELIX 18 18 ASP B 217 MET B 226 1 10 HELIX 19 19 ILE B 231 GLY B 236 1 6 HELIX 20 20 LYS B 237 ILE B 239 5 3 HELIX 21 21 ASN B 241 VAL B 249 1 9 HELIX 22 22 PHE B 273 TYR B 285 1 13 HELIX 23 23 LEU C 18 PHE C 22 5 5 HELIX 24 24 ASN C 62 PHE C 75 1 14 HELIX 25 25 GLY C 96 PHE C 113 1 18 HELIX 26 26 ASP C 118 GLY C 135 1 18 HELIX 27 27 ASN C 141 GLY C 148 1 8 HELIX 28 28 ASN C 182 ARG C 187 1 6 HELIX 29 29 LEU C 196 ASN C 215 1 20 HELIX 30 30 ASP C 217 MET C 226 1 10 HELIX 31 31 ILE C 231 GLY C 236 1 6 HELIX 32 32 LYS C 237 ILE C 239 5 3 HELIX 33 33 ASN C 241 LYS C 250 1 10 HELIX 34 34 PHE C 273 TYR C 285 1 13 HELIX 35 35 ASN D 62 PHE D 75 1 14 HELIX 36 36 GLY D 96 PHE D 113 1 18 HELIX 37 37 ASP D 118 SER D 133 1 16 HELIX 38 38 ASN D 141 GLY D 148 1 8 HELIX 39 39 ASN D 182 ILE D 189 1 8 HELIX 40 40 LEU D 196 ASN D 215 1 20 HELIX 41 41 ASP D 217 MET D 226 1 10 HELIX 42 42 ILE D 231 GLY D 236 1 6 HELIX 43 43 LYS D 237 ILE D 239 5 3 HELIX 44 44 ASN D 241 LYS D 250 1 10 HELIX 45 45 PHE D 273 TYR D 285 1 13 SHEET 1 A 5 GLU A 298 VAL A 299 0 SHEET 2 A 5 LYS A 6 ALA A 16 -1 N LYS A 10 O GLU A 298 SHEET 3 A 5 PHE A 25 ILE A 41 -1 O LEU A 27 N SER A 15 SHEET 4 A 5 GLY A 80 LYS A 86 -1 N GLY A 80 O ILE A 41 SHEET 5 A 5 ILE A 46 VAL A 50 1 O ILE A 47 N ILE A 83 SHEET 1 B 5 GLU A 298 VAL A 299 0 SHEET 2 B 5 LYS A 6 ALA A 16 -1 N LYS A 10 O GLU A 298 SHEET 3 B 5 PHE A 25 ILE A 41 -1 O LEU A 27 N SER A 15 SHEET 4 B 5 PHE A 150 ASN A 155 -1 N THR A 151 O GLY A 26 SHEET 5 B 5 GLU A 160 ILE A 164 -1 N GLU A 160 O ASN A 155 SHEET 1 C 4 VAL A 253 ILE A 258 0 SHEET 2 C 4 ILE A 265 PRO A 269 -1 N ILE A 266 O THR A 257 SHEET 3 C 4 ASP A 171 ALA A 175 -1 O LEU A 173 N ALA A 267 SHEET 4 C 4 THR A 288 GLU A 292 -1 N ILE A 289 O ILE A 174 SHEET 1 D 2 ALA A 193 GLY A 195 0 SHEET 2 D 2 ALA B 193 GLY B 195 -1 O VAL B 194 N VAL A 194 SHEET 1 E 5 GLU B 298 VAL B 299 0 SHEET 2 E 5 ARG B 8 ALA B 16 -1 N LYS B 10 O GLU B 298 SHEET 3 E 5 PHE B 25 ALA B 40 -1 N LEU B 27 O SER B 15 SHEET 4 E 5 VAL B 81 LYS B 86 -1 N LYS B 82 O GLU B 39 SHEET 5 E 5 ILE B 46 VAL B 50 1 O ILE B 47 N ILE B 83 SHEET 1 F 5 GLU B 298 VAL B 299 0 SHEET 2 F 5 ARG B 8 ALA B 16 -1 N LYS B 10 O GLU B 298 SHEET 3 F 5 PHE B 25 ALA B 40 -1 N LEU B 27 O SER B 15 SHEET 4 F 5 PHE B 150 ASN B 155 -1 N THR B 151 O GLY B 26 SHEET 5 F 5 GLU B 160 ILE B 164 -1 N GLU B 160 O ASN B 155 SHEET 1 G 4 VAL B 253 ILE B 258 0 SHEET 2 G 4 ILE B 265 PRO B 269 -1 N ILE B 266 O THR B 257 SHEET 3 G 4 ASP B 171 ILE B 176 -1 O LEU B 173 N ALA B 267 SHEET 4 G 4 ASN B 287 GLU B 292 -1 O ASN B 287 N ILE B 176 SHEET 1 H 5 GLU C 298 VAL C 299 0 SHEET 2 H 5 LYS C 6 ALA C 16 -1 N LYS C 10 O GLU C 298 SHEET 3 H 5 PHE C 25 ILE C 41 -1 O LEU C 27 N SER C 15 SHEET 4 H 5 GLY C 80 LYS C 86 -1 N GLY C 80 O ILE C 41 SHEET 5 H 5 ILE C 46 VAL C 50 1 O ILE C 47 N ILE C 83 SHEET 1 I 5 GLU C 298 VAL C 299 0 SHEET 2 I 5 LYS C 6 ALA C 16 -1 N LYS C 10 O GLU C 298 SHEET 3 I 5 PHE C 25 ILE C 41 -1 O LEU C 27 N SER C 15 SHEET 4 I 5 PHE C 150 ASN C 155 -1 N THR C 151 O GLY C 26 SHEET 5 I 5 GLU C 160 ILE C 164 -1 N GLU C 160 O ASN C 155 SHEET 1 J 4 VAL C 253 ILE C 258 0 SHEET 2 J 4 ILE C 265 PRO C 269 -1 N ILE C 266 O THR C 257 SHEET 3 J 4 ASP C 171 ALA C 175 -1 O LEU C 173 N ALA C 267 SHEET 4 J 4 THR C 288 GLU C 292 -1 O ILE C 289 N ILE C 174 SHEET 1 K 2 ALA C 193 GLY C 195 0 SHEET 2 K 2 ALA D 193 GLY D 195 -1 O VAL D 194 N VAL C 194 SHEET 1 L 5 GLU D 298 VAL D 299 0 SHEET 2 L 5 LYS D 6 ALA D 16 -1 N LYS D 10 O GLU D 298 SHEET 3 L 5 PHE D 25 ILE D 41 -1 O LEU D 27 N SER D 15 SHEET 4 L 5 GLY D 80 LYS D 86 -1 O GLY D 80 N ILE D 41 SHEET 5 L 5 ILE D 46 VAL D 50 1 O ILE D 47 N ILE D 83 SHEET 1 M 5 GLU D 298 VAL D 299 0 SHEET 2 M 5 LYS D 6 ALA D 16 -1 N LYS D 10 O GLU D 298 SHEET 3 M 5 PHE D 25 ILE D 41 -1 O LEU D 27 N SER D 15 SHEET 4 M 5 PHE D 150 ASN D 155 -1 N THR D 151 O GLY D 26 SHEET 5 M 5 GLU D 160 ILE D 164 -1 N GLU D 160 O ASN D 155 SHEET 1 N 4 VAL D 253 ILE D 258 0 SHEET 2 N 4 ILE D 265 PRO D 269 -1 N ILE D 266 O THR D 257 SHEET 3 N 4 ASP D 171 ALA D 175 -1 O LEU D 173 N ALA D 267 SHEET 4 N 4 THR D 288 GLU D 292 -1 O ILE D 289 N ILE D 174 LINK OG SER D 134 MG MG D 597 1555 1555 2.46 LINK MG MG D 597 O2A ADP D 900 1555 1555 2.23 LINK MG MG D 597 O HOH D 996 1555 1555 2.65 LINK MG MG D 597 O HOH D1007 1555 1555 2.32 CISPEP 1 GLU A 31 PRO A 32 0 0.11 CISPEP 2 GLU A 157 PRO A 158 0 0.59 CISPEP 3 GLY A 262 PRO A 263 0 0.33 CISPEP 4 GLU B 31 PRO B 32 0 0.53 CISPEP 5 GLU B 157 PRO B 158 0 1.10 CISPEP 6 GLY B 262 PRO B 263 0 0.28 CISPEP 7 GLU C 31 PRO C 32 0 -1.26 CISPEP 8 GLU C 157 PRO C 158 0 -1.73 CISPEP 9 GLY C 262 PRO C 263 0 0.99 CISPEP 10 GLU D 31 PRO D 32 0 -1.96 CISPEP 11 GLU D 157 PRO D 158 0 2.56 CISPEP 12 GLY D 262 PRO D 263 0 0.62 SITE 1 AC1 5 SER D 98 SER D 134 ADP D 900 HOH D 996 SITE 2 AC1 5 HOH D1007 SITE 1 AC2 19 PRO A 56 LYS A 61 ASN A 62 VAL A 63 SITE 2 AC2 19 LYS A 87 ALA A 91 GLY A 92 GLY A 96 SITE 3 AC2 19 SER A 97 SER A 98 SER A 101 SER A 133 SITE 4 AC2 19 THR A 183 HOH A 604 HOH A 615 HOH A 616 SITE 5 AC2 19 HOH A 630 HOH A 642 HOH A 726 SITE 1 AC3 14 PRO B 56 ASN B 62 VAL B 63 ALA B 91 SITE 2 AC3 14 GLY B 92 SER B 97 SER B 98 SER B 101 SITE 3 AC3 14 THR B 183 HOH B 709 HOH B 717 HOH B 728 SITE 4 AC3 14 HOH B 729 HOH B 801 SITE 1 AC4 18 ILE C 55 LYS C 61 ASN C 62 VAL C 63 SITE 2 AC4 18 LYS C 87 ALA C 91 GLY C 92 SER C 97 SITE 3 AC4 18 SER C 98 SER C 101 SER C 133 HOH C 806 SITE 4 AC4 18 HOH C 830 HOH C 834 HOH C 852 HOH C 905 SITE 5 AC4 18 HOH C 951 HOH C 967 SITE 1 AC5 19 ASN D 54 ILE D 55 PRO D 56 LYS D 61 SITE 2 AC5 19 ASN D 62 VAL D 63 LYS D 87 ALA D 91 SITE 3 AC5 19 GLY D 92 SER D 97 SER D 98 SER D 101 SITE 4 AC5 19 SER D 133 THR D 183 MG D 597 HOH D 903 SITE 5 AC5 19 HOH D 914 HOH D 927 HOH D1042 CRYST1 62.206 129.147 109.773 90.00 105.52 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016076 0.000000 0.004464 0.00000 SCALE2 0.000000 0.007743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009454 0.00000