HEADER IMMUNOGLOBULIN-BINDING PROTEIN 02-AUG-01 1GJS TITLE SOLUTION STRUCTURE OF THE ALBUMIN BINDING DOMAIN OF STREPTOCOCCAL TITLE 2 PROTEIN G COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G BINDING PROTEIN G; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALBUMIN-BINDING DOMAIN RESIDUES 254-299; COMPND 5 SYNONYM: ABD, ALBUMIN-BINDING DOMAIN OF PROTEIN G, IGG BINDING COMPND 6 PROTEIN G; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS SP.; SOURCE 3 ORGANISM_COMMON: GROUP G STREPTOCOCCI; SOURCE 4 ORGANISM_TAXID: 1306; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNOGLOBULIN-BINDING PROTEIN, BACTERIAL SURFACE PROTEIN, ALBUMIN KEYWDS 2 BINDING, PROTEIN G EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR M.U.JOHANSSON,I.M.FRICK,H.NILSSON,P.J.KRAULIS,S.HOBER,P.JONASSON, AUTHOR 2 A.P.NYGREN,M.UHLEN,L.BJORCK,T.DRAKENBERG,S.FORSEN,M.WIKSTROM REVDAT 7 15-MAY-24 1GJS 1 REMARK REVDAT 6 08-APR-15 1GJS 1 AUTHOR REMARK VERSN REVDAT 5 24-FEB-09 1GJS 1 VERSN REVDAT 4 05-APR-05 1GJS 1 REMARK REVDAT 3 21-MAR-02 1GJS 1 SOURCE REVDAT 2 15-MAR-02 1GJS 1 JRNL REVDAT 1 09-AUG-01 1GJS 0 JRNL AUTH M.JOHANSSON,I.FRICK,H.NILSSON,P.KRAULIS,S.HOBER,P.JONASSON, JRNL AUTH 2 M.LINHULT,P.NYGREN,M.UHLEN,L.BJORCK,T.DRAKENBERG,S.FORSEN, JRNL AUTH 3 M.WIKSTROM JRNL TITL STRUCTURE, SPECIFICITY, AND MODE OF INTERACTION FOR JRNL TITL 2 BACTERIAL ALBUMIN-BINDING MODULES JRNL REF J.BIOL.CHEM. V. 277 8114 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 11751858 JRNL DOI 10.1074/JBC.M109943200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.8 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT CAN BE FOUND IN THE JRNL REMARK 3 CITATION ABOVE. REMARK 4 REMARK 4 1GJS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1290008403. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNCACB; CBCA(CO)NH; 3D HCC(CO)NH REMARK 210 -TOCSY; 3D CC(CO)NH-TOCSY; 15N-; REMARK 210 13C EDITED 3D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : DISTANCE GEOMETRY AND RESTRAINED REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 15 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED ABD. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 3 -37.85 -160.86 REMARK 500 1 SER A 19 -49.26 -157.86 REMARK 500 1 ALA A 63 12.33 -69.24 REMARK 500 2 VAL A 6 -13.72 -148.47 REMARK 500 2 HIS A 11 97.22 -62.92 REMARK 500 2 ASN A 18 -52.77 -163.70 REMARK 500 2 VAL A 36 30.72 -88.80 REMARK 500 2 ASP A 38 -98.44 -0.61 REMARK 500 3 ILE A 4 -97.59 -110.01 REMARK 500 3 LEU A 7 -41.41 -159.98 REMARK 500 3 ALA A 14 -152.18 -69.20 REMARK 500 4 HIS A 11 10.32 -140.04 REMARK 500 4 GLU A 13 -50.08 -168.51 REMARK 500 5 LEU A 7 -12.20 -168.45 REMARK 500 5 HIS A 11 91.45 -41.89 REMARK 500 5 ASP A 16 -166.45 -174.85 REMARK 500 5 ALA A 17 -108.56 -158.36 REMARK 500 6 ALA A 3 15.56 -168.46 REMARK 500 6 LEU A 7 -47.91 -154.52 REMARK 500 6 ASN A 46 49.14 -97.46 REMARK 500 7 VAL A 6 -9.85 -50.25 REMARK 500 7 ALA A 17 -14.18 -171.88 REMARK 500 9 ALA A 3 -6.36 -164.78 REMARK 500 9 PHE A 5 -119.80 -60.00 REMARK 500 9 LEU A 7 -44.26 -169.37 REMARK 500 9 ALA A 14 -11.57 -161.40 REMARK 500 9 ALA A 17 -35.73 -175.45 REMARK 500 9 ALA A 47 92.49 -47.93 REMARK 500 10 VAL A 6 36.42 -166.48 REMARK 500 10 ASN A 8 64.50 -69.65 REMARK 500 10 ALA A 17 -80.88 -159.96 REMARK 500 10 VAL A 36 -177.97 -69.43 REMARK 500 11 ALA A 3 -35.83 -164.04 REMARK 500 11 ASP A 12 -121.22 -153.39 REMARK 500 11 ASP A 16 84.54 -154.35 REMARK 500 12 PHE A 5 72.15 -64.51 REMARK 500 12 ALA A 9 42.57 -172.48 REMARK 500 12 ASP A 12 19.15 -173.58 REMARK 500 12 ALA A 14 -142.17 -166.38 REMARK 500 12 VAL A 36 -167.33 -57.07 REMARK 500 13 PHE A 5 -38.47 -151.87 REMARK 500 13 VAL A 6 86.18 -162.13 REMARK 500 13 ASN A 8 -26.58 -160.80 REMARK 500 13 ASP A 12 42.94 -69.67 REMARK 500 13 ASP A 38 -107.77 -167.78 REMARK 500 14 ALA A 3 -70.50 -45.21 REMARK 500 14 ALA A 9 -130.33 -161.61 REMARK 500 14 ALA A 14 -5.56 -168.53 REMARK 500 14 ASP A 38 -100.12 -165.33 REMARK 500 15 ALA A 3 159.97 -39.89 REMARK 500 REMARK 500 THIS ENTRY HAS 103 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FCC RELATED DB: PDB REMARK 900 RELATED ID: 1FCL RELATED DB: PDB REMARK 900 DELTA1.5: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1DOMAIN REMARK 900 OF STREPTOCOCCAL PROTEIN G REMARK 900 RELATED ID: 1FD6 RELATED DB: PDB REMARK 900 DELTA0: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1DOMAIN OF REMARK 900 STREPTOCOCCAL PROTEIN G REMARK 900 RELATED ID: 1GB4 RELATED DB: PDB REMARK 900 HYPERTHERMOPHILIC VARIANT OF THE B1 DOMAIN FROMSTREPTOCOCCAL REMARK 900 PROTEIN G, NMR, 47 STRUCTURES REMARK 900 RELATED ID: 1GJT RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE ALBUMIN BINDING DOMAIN OF STREPTOCOCCAL REMARK 900 PROTEIN G REMARK 900 RELATED ID: 1IBX RELATED DB: PDB REMARK 900 NMR STRUCTURE OF DFF40 AND DFF45 N- TERMINAL DOMAIN COMPLEX REMARK 900 RELATED ID: 1P7E RELATED DB: PDB REMARK 900 GB3 SOLUTION STRUCTURE OBTAINED BY REFINEMENT OF X-RAYSTRUCTURE REMARK 900 WITH DIPOLAR COUPLINGS REMARK 900 RELATED ID: 1P7F RELATED DB: PDB REMARK 900 GB3 SOLUTION STRUCTURE OBTAINED BY REFINEMENT OF X-RAYSTRUCTURE REMARK 900 WITH DIPOLAR COUPLINGS REMARK 900 RELATED ID: 2IGG RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 1 TO 19 ARE DERIVED FROM THE CLONING REMARK 999 CONSTRUCT (KRAULIS ET AL., FEBS LETTERS (1996) 378, 190-194 DBREF 1GJS A 1 19 PDB 1GJS 1GJS 1 19 DBREF 1GJS A 20 65 UNP P19909 SPG2_STRSP 254 299 SEQRES 1 A 65 MET LYS ALA ILE PHE VAL LEU ASN ALA GLN HIS ASP GLU SEQRES 2 A 65 ALA VAL ASP ALA ASN SER LEU ALA GLU ALA LYS VAL LEU SEQRES 3 A 65 ALA ASN ARG GLU LEU ASP LYS TYR GLY VAL SER ASP TYR SEQRES 4 A 65 TYR LYS ASN LEU ILE ASN ASN ALA LYS THR VAL GLU GLY SEQRES 5 A 65 VAL LYS ALA LEU ILE ASP GLU ILE LEU ALA ALA LEU PRO HELIX 1 1 SER A 19 TYR A 34 1 16 HELIX 2 2 ASP A 38 ASN A 45 1 8 HELIX 3 3 VAL A 50 ALA A 63 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1