HEADER GROWTH FACTOR 08-AUG-01 1GK5 TITLE SOLUTION STRUCTURE THE MEGF/TGFALPHA44-50 CHIMERIC GROWTH FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRO-EPIDERMAL GROWTH FACTOR,PROTRANSFORMING GROWTH FACTOR COMPND 3 ALPHA; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 977-1018,UNP RESIDUES 83-89; COMPND 6 SYNONYM: EGF; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE PROTEIN IS A CHIMERA OF EPIDERMAL GROWTH FACTOR COMPND 9 RESIDUES 977-1018 AND HUMAN TRANSFORMING GROWTH FACTOR ALPHA RESIDUES COMPND 10 83-89,THE PROTEIN IS A CHIMERA OF EPIDERMAL GROWTH FACTOR RESIDUES COMPND 11 977-1018 AND HUMAN TRANSFORMING GROWTH FACTOR ALPHA RESIDUES 83-89 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE, HUMAN; SOURCE 4 ORGANISM_TAXID: 10090, 9606; SOURCE 5 GENE: EGF, TGFA; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: PICHIA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PPIC9 KEYWDS GROWTH FACTOR, EGF GROWTH FACTOR, CHIMERIC EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR S.G.CHAMBERLIN,L.BRENNAN,S.M.PUDDICOMBE,D.E.DAVIES,D.L.TURNER REVDAT 3 28-MAR-18 1GK5 1 COMPND SOURCE DBREF REVDAT 2 24-FEB-09 1GK5 1 VERSN REVDAT 1 08-AUG-02 1GK5 0 JRNL AUTH S.CHAMBERLIN,L.BRENNAN,S.PUDDICOMBE,D.DAVIES,D.TURNER JRNL TITL SOLUTION STRUCTURE OF THE MEGF/TGFALPHA44-50 CHIMERIC GROWTH JRNL TITL 2 FACTOR. JRNL REF EUR.J.BIOCHEM. V. 268 6247 2001 JRNL REFN ISSN 0014-2956 JRNL PMID 11733021 JRNL DOI 10.1046/J.0014-2956.2001.02581.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.M.PUDDICOMBE,L.WOOD,S.G.CHAMBERLIN,D.E.DAVIES REMARK 1 TITL THE INTERACTION OF AN EPIDERMAL GROWTH FACTOR/ TRANSFORMING REMARK 1 TITL 2 GROWTH FACTOR ALPHA TAIL CHIMERA WITH THE HUMAN EPIDERMAL REMARK 1 TITL 3 GROWTH FACTOR RECEPTOR REVEALS UNEXPECTED COMPLEXITIES REMARK 1 REF J.BIOL.CHEM. V. 271 30392 1996 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 8940002 REMARK 1 DOI 10.1074/JBC.271.48.30392 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : INDYANA REMARK 3 AUTHORS : BRENNAN L, TURNER DL, MESSIAS AM, TEODORO ML, REMARK 3 LEGALL J, SANTOS H, XAVIER AX. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GK5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1290008426. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D-1H-NOESY 2D-1H-TOCSY 2D-1H REMARK 210 -COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : VXR500 REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : INDYANA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS WITH REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 25 H LEU A 26 1.03 REMARK 500 HG SER A 28 H TYR A 29 1.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 11 65.22 77.15 REMARK 500 1 ASN A 16 86.28 45.49 REMARK 500 1 SER A 25 -83.33 -63.67 REMARK 500 1 SER A 38 -32.19 -152.19 REMARK 500 1 CYS A 42 27.72 43.93 REMARK 500 1 ASP A 46 53.20 -113.21 REMARK 500 2 TYR A 3 -42.21 -169.46 REMARK 500 2 CYS A 6 170.04 -55.13 REMARK 500 2 ASP A 11 57.97 77.77 REMARK 500 2 ASN A 16 85.72 44.63 REMARK 500 2 SER A 25 -83.17 -62.03 REMARK 500 2 SER A 38 -23.20 -151.19 REMARK 500 2 CYS A 42 28.13 46.54 REMARK 500 2 ASP A 46 54.11 -109.52 REMARK 500 3 ASP A 11 65.38 77.15 REMARK 500 3 ASN A 16 85.58 44.20 REMARK 500 3 SER A 25 -82.39 -64.25 REMARK 500 3 SER A 38 -34.13 -148.50 REMARK 500 3 ASP A 40 119.63 -38.65 REMARK 500 3 CYS A 42 29.21 44.84 REMARK 500 3 HIS A 44 94.57 -55.93 REMARK 500 4 SER A 2 -26.04 -171.23 REMARK 500 4 TYR A 3 60.99 -169.96 REMARK 500 4 ASP A 11 83.45 77.09 REMARK 500 4 ASN A 16 84.64 43.85 REMARK 500 4 SER A 25 -81.75 -67.42 REMARK 500 4 ASP A 46 52.04 -146.56 REMARK 500 4 LEU A 48 -61.03 -147.85 REMARK 500 5 SER A 2 -22.73 175.37 REMARK 500 5 ASP A 11 57.38 76.86 REMARK 500 5 ASN A 16 86.91 45.87 REMARK 500 5 SER A 25 -83.11 -62.31 REMARK 500 5 SER A 38 -154.03 -139.35 REMARK 500 5 CYS A 42 22.63 42.42 REMARK 500 5 HIS A 44 91.95 -56.56 REMARK 500 5 ASP A 46 52.40 -140.89 REMARK 500 6 ASP A 11 64.31 77.34 REMARK 500 6 ASN A 16 89.12 49.33 REMARK 500 6 MET A 21 97.48 -166.33 REMARK 500 6 SER A 25 -76.42 -66.00 REMARK 500 6 SER A 38 -157.53 -143.40 REMARK 500 6 ASP A 40 108.43 -58.21 REMARK 500 6 HIS A 44 96.18 -65.55 REMARK 500 6 ASP A 46 53.09 -143.03 REMARK 500 6 LEU A 47 28.64 -77.42 REMARK 500 6 LEU A 48 96.67 62.13 REMARK 500 7 SER A 2 27.85 -171.79 REMARK 500 7 ASP A 11 56.63 77.10 REMARK 500 7 ASN A 16 86.39 46.73 REMARK 500 7 SER A 25 -83.25 -64.16 REMARK 500 REMARK 500 THIS ENTRY HAS 76 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5120 RELATED DB: BMRB DBREF 1GK5 A 1 42 UNP P01132 EGF_MOUSE 977 1018 DBREF 1GK5 A 43 49 UNP P01135 TGFA_HUMAN 83 89 SEQRES 1 A 49 ASN SER TYR PRO GLY CYS PRO SER SER TYR ASP GLY TYR SEQRES 2 A 49 CYS LEU ASN GLY GLY VAL CYS MET HIS ILE GLU SER LEU SEQRES 3 A 49 ASP SER TYR THR CYS ASN CYS VAL ILE GLY TYR SER GLY SEQRES 4 A 49 ASP ARG CYS GLU HIS ALA ASP LEU LEU ALA HELIX 1 1 GLY A 39 GLU A 43 5 5 SHEET 1 AA 2 VAL A 19 ILE A 23 0 SHEET 2 AA 2 SER A 28 ASN A 32 -1 O SER A 28 N ILE A 23 SSBOND 1 CYS A 6 CYS A 20 1555 1555 2.01 SSBOND 2 CYS A 14 CYS A 31 1555 1555 2.02 SSBOND 3 CYS A 33 CYS A 42 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1