HEADER CYTOSKELETON 03-APR-02 1GXE TITLE CENTRAL DOMAIN OF CARDIAC MYOSIN BINDING PROTEIN C COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN BINDING PROTEIN C, CARDIAC-TYPE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN C5, RESIDUES 641-770; COMPND 5 SYNONYM: CARDIAC MYBP-C, C-PROTEIN - CARDIAC MUSCLE ISOFORM; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: HIS-TAGGED PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: HEART; SOURCE 6 TISSUE: MUSCLE; SOURCE 7 CELL: MYOCYTE; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET8C; SOURCE 11 OTHER_DETAILS: CARDIAC PROTEIN KEYWDS CYTOSKELETON, MUSCLE, IGI, THICK FILAMENT, IMMUNOGLOBULIN DOMAIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR M.PFUHL REVDAT 3 28-MAR-18 1GXE 1 TITLE SOURCE REMARK REVDAT 2 24-FEB-09 1GXE 1 VERSN REVDAT 1 12-JUN-03 1GXE 0 JRNL AUTH S.IDOWU,M.GAUTEL,S.PERKINS,M.PFUHL JRNL TITL STRUCTURE, STABILITY AND DYNAMICS OF THE CENTRAL DOMAIN OF JRNL TITL 2 CARDIAC MYOSIN BINDING PROTEIN C (MYBP-C): IMPLICATIONS FOR JRNL TITL 3 MULTIDOMAIN ASSEMBLY AND CAUSES FOR CARDIOMYOPATHY JRNL REF J.MOL.BIOL. V. 329 745 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12787675 JRNL DOI 10.1016/S0022-2836(03)00425-X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.IDOWU,M.GAUTEL,M.PFUHL REMARK 1 TITL SEQUENCE SPECIFIC RESONANCE ASSIGNMENT OF THE CENTRAL DOMAIN REMARK 1 TITL 2 OF CARDIAC MYOSIN BINDING PROTEIN C (MYBP-C) REMARK 1 REF J.BIOMOL.NMR V. 22 199 2002 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 11883787 REMARK 1 DOI 10.1023/A:1014248522896 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SIMULATED ANNEALING WITH STANDARD XPLOR REMARK 3 PROTOCOL DESCRIBED IN MANUSCRIPT. RESIDUES -9 TO -1 CONSTITUTE A REMARK 3 HIS-TAG. THESE RESIDUES WERE PRESENT IN THE EXPERIMENT BUT WERE REMARK 3 NOT ASSIGNED NOR USED IN THE STRUCTURE CALCULATION. REMARK 4 REMARK 4 1GXE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-APR-02. REMARK 100 THE DEPOSITION ID IS D_1290009594. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N NOESY-HSQC; 13C NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XPLOR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : RESTRAINT VIOLATIONS 0.2 A REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: 3D 15N NOESY-HSQC & 3D 13C NOESY-HSQC IN 90% H2O/10% D2O REMARK 210 3D 13C NOESY-HSQC IN 99% D2O REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 109 H LEU A 124 1.56 REMARK 500 O VAL A 21 H ILE A 129 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 2 -132.90 -145.11 REMARK 500 1 LEU A 9 -92.48 -119.38 REMARK 500 1 CYS A 11 -61.77 -170.19 REMARK 500 1 ASP A 17 80.13 -65.56 REMARK 500 1 VAL A 22 54.80 -93.35 REMARK 500 1 ALA A 23 93.30 45.25 REMARK 500 1 SER A 34 -147.68 -81.14 REMARK 500 1 GLN A 49 -73.63 -97.54 REMARK 500 1 ASN A 51 -158.39 -154.66 REMARK 500 1 LYS A 52 -159.96 53.10 REMARK 500 1 ALA A 53 173.23 -51.59 REMARK 500 1 ARG A 56 73.85 -119.60 REMARK 500 1 ALA A 61 98.02 -42.61 REMARK 500 1 ASP A 67 30.73 -145.88 REMARK 500 1 TRP A 71 74.50 -104.69 REMARK 500 1 PHE A 73 -90.33 52.89 REMARK 500 1 ASP A 74 -163.99 -69.35 REMARK 500 1 LYS A 76 99.75 -62.29 REMARK 500 1 CYS A 79 -72.74 -83.32 REMARK 500 1 THR A 81 -162.42 -73.67 REMARK 500 1 THR A 90 -177.49 -67.80 REMARK 500 1 GLU A 99 43.93 -106.89 REMARK 500 1 LYS A 127 117.44 -164.02 REMARK 500 2 GLN A 2 -159.89 -61.38 REMARK 500 2 LYS A 6 149.63 -170.47 REMARK 500 2 ILE A 7 63.77 -68.81 REMARK 500 2 LEU A 9 -98.23 -124.11 REMARK 500 2 CYS A 11 -66.80 -153.66 REMARK 500 2 PRO A 12 -87.35 -68.51 REMARK 500 2 ASP A 17 79.91 -59.22 REMARK 500 2 ALA A 23 95.18 40.66 REMARK 500 2 SER A 34 -145.45 -72.79 REMARK 500 2 ASN A 51 -68.76 -129.51 REMARK 500 2 LYS A 52 -160.38 -126.91 REMARK 500 2 ARG A 56 73.80 -118.43 REMARK 500 2 ALA A 61 98.23 -42.94 REMARK 500 2 GLU A 63 78.73 -67.74 REMARK 500 2 ASP A 67 74.96 -152.02 REMARK 500 2 SER A 68 70.05 52.77 REMARK 500 2 ASP A 69 -87.04 55.40 REMARK 500 2 GLU A 70 -170.24 -65.21 REMARK 500 2 TRP A 71 77.38 -111.42 REMARK 500 2 PHE A 73 -164.16 37.52 REMARK 500 2 LYS A 75 177.96 -53.77 REMARK 500 2 LYS A 76 156.44 60.51 REMARK 500 2 LEU A 77 -177.16 -170.41 REMARK 500 2 CYS A 79 -176.73 -64.49 REMARK 500 2 THR A 81 -156.10 -172.77 REMARK 500 2 GLU A 82 -66.06 66.50 REMARK 500 2 ARG A 84 -79.70 -91.85 REMARK 500 REMARK 500 THIS ENTRY HAS 258 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 1 0.28 SIDE CHAIN REMARK 500 1 ARG A 14 0.25 SIDE CHAIN REMARK 500 1 ARG A 28 0.31 SIDE CHAIN REMARK 500 1 ARG A 56 0.24 SIDE CHAIN REMARK 500 1 ARG A 84 0.25 SIDE CHAIN REMARK 500 1 ARG A 86 0.25 SIDE CHAIN REMARK 500 1 ARG A 93 0.21 SIDE CHAIN REMARK 500 2 ARG A 1 0.26 SIDE CHAIN REMARK 500 2 ARG A 14 0.26 SIDE CHAIN REMARK 500 2 ARG A 28 0.29 SIDE CHAIN REMARK 500 2 ARG A 56 0.31 SIDE CHAIN REMARK 500 2 ARG A 84 0.32 SIDE CHAIN REMARK 500 2 ARG A 86 0.32 SIDE CHAIN REMARK 500 2 ARG A 93 0.23 SIDE CHAIN REMARK 500 3 ARG A 1 0.23 SIDE CHAIN REMARK 500 3 ARG A 14 0.25 SIDE CHAIN REMARK 500 3 ARG A 28 0.27 SIDE CHAIN REMARK 500 3 ARG A 56 0.22 SIDE CHAIN REMARK 500 3 ARG A 84 0.23 SIDE CHAIN REMARK 500 3 ARG A 86 0.27 SIDE CHAIN REMARK 500 3 ARG A 93 0.31 SIDE CHAIN REMARK 500 4 ARG A 1 0.24 SIDE CHAIN REMARK 500 4 ARG A 14 0.28 SIDE CHAIN REMARK 500 4 ARG A 28 0.28 SIDE CHAIN REMARK 500 4 ARG A 56 0.25 SIDE CHAIN REMARK 500 4 ARG A 84 0.29 SIDE CHAIN REMARK 500 4 ARG A 86 0.32 SIDE CHAIN REMARK 500 4 ARG A 93 0.25 SIDE CHAIN REMARK 500 5 ARG A 1 0.31 SIDE CHAIN REMARK 500 5 ARG A 14 0.29 SIDE CHAIN REMARK 500 5 ARG A 28 0.26 SIDE CHAIN REMARK 500 5 ARG A 56 0.24 SIDE CHAIN REMARK 500 5 ARG A 84 0.30 SIDE CHAIN REMARK 500 5 ARG A 86 0.28 SIDE CHAIN REMARK 500 5 ARG A 93 0.25 SIDE CHAIN REMARK 500 6 ARG A 1 0.29 SIDE CHAIN REMARK 500 6 ARG A 14 0.28 SIDE CHAIN REMARK 500 6 ARG A 28 0.22 SIDE CHAIN REMARK 500 6 ARG A 56 0.23 SIDE CHAIN REMARK 500 6 ARG A 84 0.24 SIDE CHAIN REMARK 500 6 ARG A 86 0.32 SIDE CHAIN REMARK 500 6 ARG A 93 0.26 SIDE CHAIN REMARK 500 7 ARG A 1 0.28 SIDE CHAIN REMARK 500 7 ARG A 14 0.23 SIDE CHAIN REMARK 500 7 ARG A 28 0.21 SIDE CHAIN REMARK 500 7 ARG A 56 0.25 SIDE CHAIN REMARK 500 7 ARG A 84 0.24 SIDE CHAIN REMARK 500 7 ARG A 86 0.32 SIDE CHAIN REMARK 500 7 ARG A 93 0.29 SIDE CHAIN REMARK 500 8 ARG A 1 0.31 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 70 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1GXE A -9 -1 PDB 1GXE 1GXE -9 -1 DBREF 1GXE A 1 130 UNP Q14896 MYPC_HUMAN 641 770 SEQRES 1 A 139 MET HIS HIS HIS HIS HIS HIS SER SER ARG GLN GLU PRO SEQRES 2 A 139 PRO LYS ILE HIS LEU ASP CYS PRO GLY ARG ILE PRO ASP SEQRES 3 A 139 THR ILE VAL VAL VAL ALA GLY ASN LYS LEU ARG LEU ASP SEQRES 4 A 139 VAL PRO ILE SER GLY ASP PRO ALA PRO THR VAL ILE TRP SEQRES 5 A 139 GLN LYS ALA ILE THR GLN GLY ASN LYS ALA PRO ALA ARG SEQRES 6 A 139 PRO ALA PRO ASP ALA PRO GLU ASP THR GLY ASP SER ASP SEQRES 7 A 139 GLU TRP VAL PHE ASP LYS LYS LEU LEU CYS GLU THR GLU SEQRES 8 A 139 GLY ARG VAL ARG VAL GLU THR THR LYS ASP ARG SER ILE SEQRES 9 A 139 PHE THR VAL GLU GLY ALA GLU LYS GLU ASP GLU GLY VAL SEQRES 10 A 139 TYR THR VAL THR VAL LYS ASN PRO VAL GLY GLU ASP GLN SEQRES 11 A 139 VAL ASN LEU THR VAL LYS VAL ILE ASP SHEET 1 AA 4 THR A 18 VAL A 21 0 SHEET 2 AA 4 GLU A 119 VAL A 128 1 O THR A 125 N ILE A 19 SHEET 3 AA 4 GLY A 107 LYS A 114 -1 O GLY A 107 N VAL A 126 SHEET 4 AA 4 THR A 40 ALA A 46 -1 N THR A 40 O LYS A 114 SHEET 1 AB 3 ASP A 30 PRO A 32 0 SHEET 2 AB 3 ARG A 93 THR A 97 -1 O SER A 94 N VAL A 31 SHEET 3 AB 3 ARG A 86 THR A 90 -1 O ARG A 86 N THR A 97 CISPEP 1 ASP A 36 PRO A 37 1 -0.24 CISPEP 2 ASP A 36 PRO A 37 2 0.16 CISPEP 3 ASP A 36 PRO A 37 3 -0.29 CISPEP 4 ASP A 36 PRO A 37 4 0.08 CISPEP 5 ASP A 36 PRO A 37 5 0.12 CISPEP 6 ASP A 36 PRO A 37 6 -0.32 CISPEP 7 ASP A 36 PRO A 37 7 -0.20 CISPEP 8 ASP A 36 PRO A 37 8 0.50 CISPEP 9 ASP A 36 PRO A 37 9 -0.03 CISPEP 10 ASP A 36 PRO A 37 10 0.37 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1