HEADER OXIDOREDUCTASE (FLAVOENZYME) 30-JAN-95 1GYL TITLE INVOLVEMENT OF TYR24 AND TRP108 IN SUBSTRATE BINDING AND SUBSTRATE TITLE 2 SPECIFICITY OF GLYCOLATE OXIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOLATE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.3.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; SOURCE 3 ORGANISM_COMMON: SPINACH; SOURCE 4 ORGANISM_TAXID: 3562; SOURCE 5 GENE: GLYCOLATE OXIDASE FROM SPINACH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PKS26 KEYWDS OXIDOREDUCTASE (FLAVOENZYME) EXPDTA X-RAY DIFFRACTION AUTHOR Y.LINDQVIST,K.STENBERG REVDAT 3 07-FEB-24 1GYL 1 REMARK SEQADV REVDAT 2 24-FEB-09 1GYL 1 VERSN REVDAT 1 31-MAR-95 1GYL 0 JRNL AUTH K.STENBERG,T.CLAUSEN,Y.LINDQVIST,P.MACHEROUX JRNL TITL INVOLVEMENT OF TYR24 AND TRP108 IN SUBSTRATE BINDING AND JRNL TITL 2 SUBSTRATE SPECIFICITY OF GLYCOLATE OXIDASE. JRNL REF EUR.J.BIOCHEM. V. 228 408 1995 JRNL REFN ISSN 0014-2956 JRNL PMID 7705356 JRNL DOI 10.1111/J.1432-1033.1995.TB20278.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.MACHEROUX,V.KIEWEG,V.MASSEY,E.SODERLIND,K.STENBERG, REMARK 1 AUTH 2 Y.LINDQVIST REMARK 1 TITL ROLE OF TYROSINE 129 IN THE ACTIVE SITE OF SPINACH GLYCOLATE REMARK 1 TITL 2 OXIDASE REMARK 1 REF EUR.J.BIOCHEM. V. 213 1047 1993 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.LINDQVIST,C.-I.BRANDEN REMARK 1 TITL THE ACTIVE SITE OF SPINACH GLYCOLATE OXIDASE REMARK 1 REF J.BIOL.CHEM. V. 264 3624 1989 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 3 REMARK 1 AUTH Y.LINDQVIST REMARK 1 TITL REFINED STRUCTURE OF SPINACH GLYCOLATE OXIDASE AT 2 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 209 151 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 41999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5403 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 2.590 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GYL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18421 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MTRIX REMARK 300 THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW REMARK 300 DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE REMARK 300 VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE REMARK 300 MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED REMARK 300 SECOND. REMARK 300 REMARK 300 APPLIED TO TRANSFORMED TO REMARK 300 MTRIX RESIDUES RESIDUES RMSD REMARK 300 M1 A 1 .. A 359 B 1 .. B 359 2.2 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 450 REMARK 450 SOURCE REMARK 450 PET-BASED EXPRESSION SYSTEM. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 191 REMARK 465 ASP A 192 REMARK 465 LYS A 193 REMARK 465 ALA A 194 REMARK 465 ASN A 195 REMARK 465 ASP A 196 REMARK 465 SER A 197 REMARK 465 GLY A 360 REMARK 465 PRO A 361 REMARK 465 SER A 362 REMARK 465 SER A 363 REMARK 465 ARG A 364 REMARK 465 ALA A 365 REMARK 465 VAL A 366 REMARK 465 ALA A 367 REMARK 465 ARG A 368 REMARK 465 LEU A 369 REMARK 465 GLY B 189 REMARK 465 LYS B 190 REMARK 465 MET B 191 REMARK 465 ASP B 192 REMARK 465 LYS B 193 REMARK 465 ALA B 194 REMARK 465 ASN B 195 REMARK 465 ASP B 196 REMARK 465 SER B 197 REMARK 465 GLY B 360 REMARK 465 PRO B 361 REMARK 465 SER B 362 REMARK 465 SER B 363 REMARK 465 ARG B 364 REMARK 465 ALA B 365 REMARK 465 VAL B 366 REMARK 465 ALA B 367 REMARK 465 ARG B 368 REMARK 465 LEU B 369 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 77 C - N - CA ANGL. DEV. = 14.3 DEGREES REMARK 500 PRO A 121 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 PRO A 121 C - N - CD ANGL. DEV. = -12.9 DEGREES REMARK 500 ALA A 147 N - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 ARG A 160 N - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 PRO A 175 C - N - CA ANGL. DEV. = 10.6 DEGREES REMARK 500 PRO A 176 C - N - CA ANGL. DEV. = 11.5 DEGREES REMARK 500 TYR A 202 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 PRO A 281 C - N - CA ANGL. DEV. = 10.8 DEGREES REMARK 500 LEU A 284 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 PRO B 121 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 PRO B 159 C - N - CA ANGL. DEV. = 13.8 DEGREES REMARK 500 PRO B 159 C - N - CD ANGL. DEV. = -17.9 DEGREES REMARK 500 LEU B 228 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 PRO B 281 C - N - CA ANGL. DEV. = 12.2 DEGREES REMARK 500 LEU B 298 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 116.39 -169.50 REMARK 500 ASN A 7 1.90 164.22 REMARK 500 GLU A 10 -55.65 -25.11 REMARK 500 LYS A 19 -69.34 -5.31 REMARK 500 ALA A 26 55.84 -107.71 REMARK 500 GLU A 30 -88.66 55.53 REMARK 500 GLN A 32 19.45 58.01 REMARK 500 PHE A 47 173.24 -57.10 REMARK 500 ARG A 48 60.10 -159.30 REMARK 500 PRO A 49 167.74 -49.54 REMARK 500 LEU A 52 45.28 72.77 REMARK 500 ASP A 59 92.09 -164.03 REMARK 500 THR A 61 132.24 -33.54 REMARK 500 THR A 63 95.85 176.13 REMARK 500 SER A 70 -59.57 -27.67 REMARK 500 PRO A 72 4.17 -61.43 REMARK 500 PRO A 77 82.42 -53.21 REMARK 500 ALA A 79 -161.54 -66.36 REMARK 500 MET A 80 99.24 -43.51 REMARK 500 HIS A 85 95.99 97.44 REMARK 500 PRO A 86 88.33 -57.28 REMARK 500 GLU A 87 -48.80 178.96 REMARK 500 GLU A 89 -48.67 118.76 REMARK 500 THR A 101 -144.89 -108.40 REMARK 500 TRP A 108 23.10 -69.76 REMARK 500 ALA A 117 -11.11 -48.14 REMARK 500 PRO A 121 106.55 -24.85 REMARK 500 ALA A 138 -34.89 -38.26 REMARK 500 ALA A 144 47.65 -76.17 REMARK 500 GLU A 145 -141.59 -75.70 REMARK 500 LYS A 150 -59.04 50.27 REMARK 500 VAL A 156 4.07 -62.86 REMARK 500 PRO A 159 -77.76 -78.42 REMARK 500 GLU A 165 -102.18 -34.70 REMARK 500 ALA A 166 -78.13 14.89 REMARK 500 ASP A 167 -56.48 -29.63 REMARK 500 LYS A 169 -51.84 -128.93 REMARK 500 ARG A 171 105.95 -43.80 REMARK 500 PHE A 172 101.64 -51.79 REMARK 500 PRO A 175 92.08 -25.40 REMARK 500 PRO A 176 -58.58 -17.48 REMARK 500 LYS A 181 2.01 -53.54 REMARK 500 PHE A 183 -44.14 -134.40 REMARK 500 GLU A 184 -33.89 60.37 REMARK 500 ILE A 186 -77.56 -119.51 REMARK 500 ASP A 187 162.74 66.61 REMARK 500 LEU A 188 -118.75 -85.47 REMARK 500 LEU A 199 -146.38 -111.04 REMARK 500 SER A 200 -51.27 21.87 REMARK 500 ILE A 207 163.54 161.66 REMARK 500 REMARK 500 THIS ENTRY HAS 171 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 22 0.07 SIDE CHAIN REMARK 500 TYR B 90 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 370 DBREF 1GYL A 1 369 UNP P05414 GOX_SPIOL 1 369 DBREF 1GYL B 1 369 UNP P05414 GOX_SPIOL 1 369 SEQADV 1GYL PHE A 24 UNP P05414 TYR 24 CONFLICT SEQADV 1GYL PHE B 24 UNP P05414 TYR 24 CONFLICT SEQRES 1 A 369 MET GLU ILE THR ASN VAL ASN GLU TYR GLU ALA ILE ALA SEQRES 2 A 369 LYS GLN LYS LEU PRO LYS MET VAL TYR ASP PHE TYR ALA SEQRES 3 A 369 SER GLY ALA GLU ASP GLN TRP THR LEU ALA GLU ASN ARG SEQRES 4 A 369 ASN ALA PHE SER ARG ILE LEU PHE ARG PRO ARG ILE LEU SEQRES 5 A 369 ILE ASP VAL THR ASN ILE ASP MET THR THR THR ILE LEU SEQRES 6 A 369 GLY PHE LYS ILE SER MET PRO ILE MET ILE ALA PRO THR SEQRES 7 A 369 ALA MET GLN LYS MET ALA HIS PRO GLU GLY GLU TYR ALA SEQRES 8 A 369 THR ALA ARG ALA ALA SER ALA ALA GLY THR ILE MET THR SEQRES 9 A 369 LEU SER SER TRP ALA THR SER SER VAL GLU GLU VAL ALA SEQRES 10 A 369 SER THR GLY PRO GLY ILE ARG PHE PHE GLN LEU TYR VAL SEQRES 11 A 369 TYR LYS ASP ARG ASN VAL VAL ALA GLN LEU VAL ARG ARG SEQRES 12 A 369 ALA GLU ARG ALA GLY PHE LYS ALA ILE ALA LEU THR VAL SEQRES 13 A 369 ASP THR PRO ARG LEU GLY ARG ARG GLU ALA ASP ILE LYS SEQRES 14 A 369 ASN ARG PHE VAL LEU PRO PRO PHE LEU THR LEU LYS ASN SEQRES 15 A 369 PHE GLU GLY ILE ASP LEU GLY LYS MET ASP LYS ALA ASN SEQRES 16 A 369 ASP SER GLY LEU SER SER TYR VAL ALA GLY GLN ILE ASP SEQRES 17 A 369 ARG SER LEU SER TRP LYS ASP VAL ALA TRP LEU GLN THR SEQRES 18 A 369 ILE THR SER LEU PRO ILE LEU VAL LYS GLY VAL ILE THR SEQRES 19 A 369 ALA GLU ASP ALA ARG LEU ALA VAL GLN HIS GLY ALA ALA SEQRES 20 A 369 GLY ILE ILE VAL SER ASN HIS GLY ALA ARG GLN LEU ASP SEQRES 21 A 369 TYR VAL PRO ALA THR ILE MET ALA LEU GLU GLU VAL VAL SEQRES 22 A 369 LYS ALA ALA GLN GLY ARG ILE PRO VAL PHE LEU ASP GLY SEQRES 23 A 369 GLY VAL ARG ARG GLY THR ASP VAL PHE LYS ALA LEU ALA SEQRES 24 A 369 LEU GLY ALA ALA GLY VAL PHE ILE GLY ARG PRO VAL VAL SEQRES 25 A 369 PHE SER LEU ALA ALA GLU GLY GLU ALA GLY VAL LYS LYS SEQRES 26 A 369 VAL LEU GLN MET MET ARG ASP GLU PHE GLU LEU THR MET SEQRES 27 A 369 ALA LEU SER GLY CYS ARG SER LEU LYS GLU ILE SER ARG SEQRES 28 A 369 SER HIS ILE ALA ALA ASP TRP ASP GLY PRO SER SER ARG SEQRES 29 A 369 ALA VAL ALA ARG LEU SEQRES 1 B 369 MET GLU ILE THR ASN VAL ASN GLU TYR GLU ALA ILE ALA SEQRES 2 B 369 LYS GLN LYS LEU PRO LYS MET VAL TYR ASP PHE TYR ALA SEQRES 3 B 369 SER GLY ALA GLU ASP GLN TRP THR LEU ALA GLU ASN ARG SEQRES 4 B 369 ASN ALA PHE SER ARG ILE LEU PHE ARG PRO ARG ILE LEU SEQRES 5 B 369 ILE ASP VAL THR ASN ILE ASP MET THR THR THR ILE LEU SEQRES 6 B 369 GLY PHE LYS ILE SER MET PRO ILE MET ILE ALA PRO THR SEQRES 7 B 369 ALA MET GLN LYS MET ALA HIS PRO GLU GLY GLU TYR ALA SEQRES 8 B 369 THR ALA ARG ALA ALA SER ALA ALA GLY THR ILE MET THR SEQRES 9 B 369 LEU SER SER TRP ALA THR SER SER VAL GLU GLU VAL ALA SEQRES 10 B 369 SER THR GLY PRO GLY ILE ARG PHE PHE GLN LEU TYR VAL SEQRES 11 B 369 TYR LYS ASP ARG ASN VAL VAL ALA GLN LEU VAL ARG ARG SEQRES 12 B 369 ALA GLU ARG ALA GLY PHE LYS ALA ILE ALA LEU THR VAL SEQRES 13 B 369 ASP THR PRO ARG LEU GLY ARG ARG GLU ALA ASP ILE LYS SEQRES 14 B 369 ASN ARG PHE VAL LEU PRO PRO PHE LEU THR LEU LYS ASN SEQRES 15 B 369 PHE GLU GLY ILE ASP LEU GLY LYS MET ASP LYS ALA ASN SEQRES 16 B 369 ASP SER GLY LEU SER SER TYR VAL ALA GLY GLN ILE ASP SEQRES 17 B 369 ARG SER LEU SER TRP LYS ASP VAL ALA TRP LEU GLN THR SEQRES 18 B 369 ILE THR SER LEU PRO ILE LEU VAL LYS GLY VAL ILE THR SEQRES 19 B 369 ALA GLU ASP ALA ARG LEU ALA VAL GLN HIS GLY ALA ALA SEQRES 20 B 369 GLY ILE ILE VAL SER ASN HIS GLY ALA ARG GLN LEU ASP SEQRES 21 B 369 TYR VAL PRO ALA THR ILE MET ALA LEU GLU GLU VAL VAL SEQRES 22 B 369 LYS ALA ALA GLN GLY ARG ILE PRO VAL PHE LEU ASP GLY SEQRES 23 B 369 GLY VAL ARG ARG GLY THR ASP VAL PHE LYS ALA LEU ALA SEQRES 24 B 369 LEU GLY ALA ALA GLY VAL PHE ILE GLY ARG PRO VAL VAL SEQRES 25 B 369 PHE SER LEU ALA ALA GLU GLY GLU ALA GLY VAL LYS LYS SEQRES 26 B 369 VAL LEU GLN MET MET ARG ASP GLU PHE GLU LEU THR MET SEQRES 27 B 369 ALA LEU SER GLY CYS ARG SER LEU LYS GLU ILE SER ARG SEQRES 28 B 369 SER HIS ILE ALA ALA ASP TRP ASP GLY PRO SER SER ARG SEQRES 29 B 369 ALA VAL ALA ARG LEU HET FMN A 370 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN C17 H21 N4 O9 P FORMUL 4 HOH *2(H2 O) HELIX 1 1 GLU A 8 LYS A 16 1 9 HELIX 2 2 MET A 20 TYR A 25 1 6 HELIX 3 3 TRP A 33 ASN A 38 1 6 HELIX 4 4 PHE A 42 ARG A 44 5 3 HELIX 5 5 TYR A 90 ALA A 99 1 10 HELIX 6 6 VAL A 113 THR A 119 1 7 HELIX 7 7 ASN A 135 VAL A 141 1 7 HELIX 8 8 ALA A 166 ILE A 168 5 3 HELIX 9 9 VAL A 203 GLY A 205 5 3 HELIX 10 10 ASP A 215 ILE A 222 1 8 HELIX 11 11 ARG A 239 GLN A 243 1 5 HELIX 12 12 THR A 265 ALA A 275 1 11 HELIX 13 13 GLY A 291 LEU A 300 1 10 HELIX 14 14 ARG A 309 VAL A 326 1 18 HELIX 15 15 GLN A 328 LEU A 340 1 13 HELIX 16 16 LEU A 346 GLU A 348 5 3 HELIX 17 17 VAL B 6 GLN B 15 5 10 HELIX 18 18 LYS B 19 PHE B 24 1 6 HELIX 19 19 THR B 34 ARG B 39 1 6 HELIX 20 20 LYS B 82 ALA B 84 5 3 HELIX 21 21 ALA B 95 ALA B 98 1 4 HELIX 22 22 ASP B 167 LYS B 169 5 3 HELIX 23 23 TYR B 202 ALA B 204 5 3 HELIX 24 24 ALA B 217 GLN B 220 1 4 HELIX 25 25 ALA B 235 ALA B 238 1 4 HELIX 26 26 LEU B 240 GLN B 243 1 4 HELIX 27 27 MET B 267 VAL B 273 5 7 HELIX 28 28 ASP B 293 GLY B 301 1 9 HELIX 29 29 ARG B 309 SER B 314 5 6 HELIX 30 30 GLY B 319 LEU B 340 1 22 SHEET 1 A 3 PHE A 126 LEU A 128 0 SHEET 2 A 3 ILE A 152 LEU A 154 1 N ALA A 153 O PHE A 126 SHEET 3 A 3 ILE A 227 VAL A 229 1 N LEU A 228 O ILE A 152 SHEET 1 B 2 ILE B 250 SER B 252 0 SHEET 2 B 2 PHE B 283 ASP B 285 1 N PHE B 283 O VAL B 251 SITE 1 AC1 20 PHE A 24 TYR A 25 ALA A 76 PRO A 77 SITE 2 AC1 20 ALA A 79 SER A 106 TRP A 108 GLN A 127 SITE 3 AC1 20 TYR A 129 THR A 155 LYS A 230 SER A 252 SITE 4 AC1 20 HIS A 254 ARG A 257 ASP A 285 GLY A 286 SITE 5 AC1 20 GLY A 287 ARG A 289 GLY A 308 ARG A 309 CRYST1 145.500 145.500 100.800 90.00 90.00 90.00 P 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006873 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009921 0.00000 MTRIX1 1 0.000000 -1.000000 0.000000 73.00000 1 MTRIX2 1 -1.000000 0.000000 0.000000 71.50000 1 MTRIX3 1 0.000000 0.000000 -1.000000 48.50000 1