HEADER OXIDOREDUCTASE 22-MAY-01 1H5N TITLE DMSO REDUCTASE MODIFIED BY THE PRESENCE OF DMS AND AIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIMETHYL SULFOXIDE/TRIMETHYLAMINE N-OXIDE REDUCTASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: TMAOR; COMPND 5 EC: 1.7.2.3,1.8.5.3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS; SOURCE 3 ORGANISM_TAXID: 1061; SOURCE 4 CELLULAR_LOCATION: PERIPLASM KEYWDS OXIDOREDUCTASE, REDUCTASE, DMSO, DMS, MOLYBDOPTERIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BAILEY,B.ADAMS,A.T.SMITH,R.L.RICHARDS,D.J.LOWE,R.C.BRAY REVDAT 6 13-DEC-23 1H5N 1 REMARK LINK REVDAT 5 06-NOV-19 1H5N 1 COMPND SOURCE DBREF SEQADV REVDAT 4 14-NOV-12 1H5N 1 SOURCE REMARK VERSN DBREF REVDAT 4 2 1 FORMUL SHEET LINK REVDAT 3 24-FEB-09 1H5N 1 VERSN REVDAT 2 01-AUG-03 1H5N 1 REMARK LINK REVDAT 1 17-MAY-02 1H5N 0 JRNL AUTH R.C.BRAY,B.ADAMS,A.T.SMITH,R.L.RICHARDS,D.J.LOWE,S.BAILEY JRNL TITL REACTIONS OF DIMETHYL SULPHOXIDE REDUCTASE IN THE PRESENCE JRNL TITL 2 OF DIMETHYLSULPHIDE AND THE STRUCTURE OF THE JRNL TITL 3 DIMETHYLSULPHIDE-MODIFIED ENZYME JRNL REF BIOCHEMISTRY V. 40 9810 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11502174 JRNL DOI 10.1021/BI010559R REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.7 REMARK 3 NUMBER OF REFLECTIONS : 100172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SAME AS PREVIOUS MODEL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 200 REMARK 3 SOLVENT ATOMS : 1234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.160 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.300 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.013 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.032 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.034 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1H5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-MAY-01. REMARK 100 THE DEPOSITION ID IS D_1290006016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 105657 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.7 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.07100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1E5V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES BUFFER, PH 7.5, 2M AMMONIUM REMARK 280 SULPHATE, 4% PEG 400, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.20000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 115.20000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REDUCES VARIOUS N-OXIDE AND SULFOXIDE COMPOUNDS INCLUDING REMARK 400 TRIMETHYLAMINE N-OXIDE DURING ANAEROBIC GROWTH USING REMARK 400 MOLYBDENUM (MOLYBDOPTERIN)AS COFACTOR. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -41 REMARK 465 THR A -40 REMARK 465 LYS A -39 REMARK 465 PHE A -38 REMARK 465 SER A -37 REMARK 465 GLY A -36 REMARK 465 ASN A -35 REMARK 465 GLU A -34 REMARK 465 LEU A -33 REMARK 465 ARG A -32 REMARK 465 ALA A -31 REMARK 465 GLU A -30 REMARK 465 LEU A -29 REMARK 465 TYR A -28 REMARK 465 ARG A -27 REMARK 465 ARG A -26 REMARK 465 ALA A -25 REMARK 465 PHE A -24 REMARK 465 LEU A -23 REMARK 465 SER A -22 REMARK 465 TYR A -21 REMARK 465 SER A -20 REMARK 465 VAL A -19 REMARK 465 ALA A -18 REMARK 465 PRO A -17 REMARK 465 GLY A -16 REMARK 465 ALA A -15 REMARK 465 LEU A -14 REMARK 465 GLY A -13 REMARK 465 MET A -12 REMARK 465 PHE A -11 REMARK 465 GLY A -10 REMARK 465 ARG A -9 REMARK 465 SER A -8 REMARK 465 LEU A -7 REMARK 465 LEU A -6 REMARK 465 ALA A -5 REMARK 465 LYS A -4 REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 ARG A -1 REMARK 465 ALA A 0 REMARK 465 GLU A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 ALA A 381 REMARK 465 ALA A 382 REMARK 465 THR A 383 REMARK 465 LYS A 384 REMARK 465 GLY A 385 REMARK 465 PRO A 386 REMARK 465 GLU A 387 REMARK 465 TRP A 388 REMARK 465 LEU A 389 REMARK 465 ALA A 390 REMARK 465 ALA A 391 REMARK 465 SER A 392 REMARK 465 GLY A 393 REMARK 465 MET C -41 REMARK 465 THR C -40 REMARK 465 LYS C -39 REMARK 465 PHE C -38 REMARK 465 SER C -37 REMARK 465 GLY C -36 REMARK 465 ASN C -35 REMARK 465 GLU C -34 REMARK 465 LEU C -33 REMARK 465 ARG C -32 REMARK 465 ALA C -31 REMARK 465 GLU C -30 REMARK 465 LEU C -29 REMARK 465 TYR C -28 REMARK 465 ARG C -27 REMARK 465 ARG C -26 REMARK 465 ALA C -25 REMARK 465 PHE C -24 REMARK 465 LEU C -23 REMARK 465 SER C -22 REMARK 465 TYR C -21 REMARK 465 SER C -20 REMARK 465 VAL C -19 REMARK 465 ALA C -18 REMARK 465 PRO C -17 REMARK 465 GLY C -16 REMARK 465 ALA C -15 REMARK 465 LEU C -14 REMARK 465 GLY C -13 REMARK 465 MET C -12 REMARK 465 PHE C -11 REMARK 465 GLY C -10 REMARK 465 ARG C -9 REMARK 465 SER C -8 REMARK 465 LEU C -7 REMARK 465 LEU C -6 REMARK 465 ALA C -5 REMARK 465 LYS C -4 REMARK 465 GLY C -3 REMARK 465 ALA C -2 REMARK 465 ARG C -1 REMARK 465 ALA C 0 REMARK 465 GLU C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 381 REMARK 465 ALA C 382 REMARK 465 THR C 383 REMARK 465 LYS C 384 REMARK 465 GLY C 385 REMARK 465 PRO C 386 REMARK 465 GLU C 387 REMARK 465 TRP C 388 REMARK 465 LEU C 389 REMARK 465 ALA C 390 REMARK 465 ALA C 391 REMARK 465 SER C 392 REMARK 465 GLY C 393 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 555 CB CG CD OE1 NE2 REMARK 470 GLU A 781 CG CD OE1 OE2 REMARK 470 LYS C 98 CD CE NZ REMARK 470 GLU C 781 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 407 NH2 ARG A 444 2.07 REMARK 500 OG1 THR A 772 O HOH A 2640 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 312 CD GLU A 312 OE1 -0.113 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 62 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 62 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG A 130 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 130 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 224 CD - NE - CZ ANGL. DEV. = 15.8 DEGREES REMARK 500 ARG A 224 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 273 CB - CG - OD1 ANGL. DEV. = 8.1 DEGREES REMARK 500 LEU A 307 CB - CG - CD2 ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG A 309 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 GLU A 312 OE1 - CD - OE2 ANGL. DEV. = -13.9 DEGREES REMARK 500 GLU A 312 CG - CD - OE2 ANGL. DEV. = 18.3 DEGREES REMARK 500 ARG A 326 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 419 CD - NE - CZ ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG A 419 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 442 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 444 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 521 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP A 543 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 VAL A 568 CB - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 VAL A 568 N - CA - CB ANGL. DEV. = 15.4 DEGREES REMARK 500 VAL A 568 CA - CB - CG2 ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG A 580 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 585 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 658 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 688 CD - NE - CZ ANGL. DEV. = 12.0 DEGREES REMARK 500 ARG A 688 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP A 692 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 693 CG - CD - NE ANGL. DEV. = 12.9 DEGREES REMARK 500 ASP A 704 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 VAL A 769 N - CA - CB ANGL. DEV. = -15.9 DEGREES REMARK 500 ASP C 35 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 61 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 62 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG C 62 NE - CZ - NH2 ANGL. DEV. = -10.5 DEGREES REMARK 500 ARG C 83 NE - CZ - NH1 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG C 83 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG C 130 NE - CZ - NH1 ANGL. DEV. = -8.6 DEGREES REMARK 500 ARG C 130 NE - CZ - NH2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG C 131 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ALA C 143 N - CA - CB ANGL. DEV. = 8.6 DEGREES REMARK 500 THR C 161 CB - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 TYR C 165 CB - CG - CD2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG C 224 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 GLU C 312 OE1 - CD - OE2 ANGL. DEV. = -11.6 DEGREES REMARK 500 GLU C 312 CG - CD - OE2 ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG C 401 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG C 442 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 VAL C 446 CA - CB - CG2 ANGL. DEV. = -9.0 DEGREES REMARK 500 ASP C 459 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP C 543 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 59 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 37 79.40 -159.09 REMARK 500 SER A 113 57.49 38.99 REMARK 500 LYS A 117 -141.93 35.58 REMARK 500 GLU A 163 -42.22 71.22 REMARK 500 ARG A 326 50.09 -98.18 REMARK 500 SER A 357 23.16 -141.31 REMARK 500 VAL A 437 -41.81 -130.38 REMARK 500 ASP A 441 71.51 59.60 REMARK 500 TYR A 506 -131.41 42.55 REMARK 500 THR A 573 -77.50 -109.97 REMARK 500 ASP A 587 95.43 -164.18 REMARK 500 PRO A 616 172.38 -59.11 REMARK 500 HIS A 649 -123.27 58.91 REMARK 500 LEU A 652 7.79 81.13 REMARK 500 ASN A 691 -154.55 -150.69 REMARK 500 SER A 746 -175.96 -176.53 REMARK 500 SER C 10 -156.17 -151.32 REMARK 500 HIS C 37 77.71 -163.54 REMARK 500 LYS C 117 -137.85 41.73 REMARK 500 GLU C 163 -50.10 67.21 REMARK 500 ASP C 284 16.53 -149.49 REMARK 500 ARG C 326 44.06 -99.29 REMARK 500 ASP C 441 71.46 52.94 REMARK 500 TYR C 506 -128.50 49.75 REMARK 500 THR C 573 -84.91 -111.65 REMARK 500 CYS C 615 79.13 -155.82 REMARK 500 PRO C 616 171.23 -57.15 REMARK 500 HIS C 649 -122.41 60.71 REMARK 500 ASN C 691 -157.49 -153.11 REMARK 500 ASP C 742 78.05 -100.54 REMARK 500 SER C 746 -176.32 -170.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2115 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH C2070 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH C2082 DISTANCE = 7.23 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6MO A1784 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 147 OG REMARK 620 2 PGD A1782 S12 96.5 REMARK 620 3 PGD A1782 S13 108.4 81.0 REMARK 620 4 PGD A1783 S12 107.7 155.0 85.7 REMARK 620 5 PGD A1783 S13 130.9 87.9 120.5 80.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6MO C1784 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 147 OG REMARK 620 2 PGD C1782 S13 111.4 REMARK 620 3 PGD C1782 S12 103.5 82.8 REMARK 620 4 PGD C1783 S13 130.8 117.6 87.5 REMARK 620 5 PGD C1783 S12 102.8 84.3 153.5 78.1 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AH" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "CG" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1785 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1785 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGD A 1782 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGD A 1783 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6MO A 1784 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGD C 1782 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGD C 1783 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6MO C 1784 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DMR RELATED DB: PDB REMARK 900 OXIDIZED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS REMARK 900 RELATED ID: 1E18 RELATED DB: PDB REMARK 900 TUNGSTEN-SUSBSTITUTED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS REMARK 900 RELATED ID: 1E5V RELATED DB: PDB REMARK 900 OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES BUFFER REMARK 900 RELATED ID: 1E60 RELATED DB: PDB REMARK 900 OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - STRUCTURE II BUFFER REMARK 900 RELATED ID: 1E61 RELATED DB: PDB REMARK 900 OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - STRUCTURE II BUFFER REMARK 900 RELATED ID: 2DMR RELATED DB: PDB REMARK 900 DITHIONITE REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS REMARK 900 RELATED ID: 3DMR RELATED DB: PDB REMARK 900 STRUCTURE OF DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS AT PH 7.0 REMARK 900 RELATED ID: 4DMR RELATED DB: PDB REMARK 900 REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS WITH BOUND DMSO REMARK 900 SUBSTRATE DBREF 1H5N A -41 781 UNP Q52675 DSTOR_RHOCA 1 823 DBREF 1H5N C -41 781 UNP Q52675 DSTOR_RHOCA 1 823 SEQADV 1H5N SER A 39 UNP Q52675 THR 81 CONFLICT SEQADV 1H5N ALA A 43 UNP Q52675 GLU 85 CONFLICT SEQADV 1H5N GLU A 107 UNP Q52675 GLN 149 CONFLICT SEQADV 1H5N GLU A 234 UNP Q52675 ASP 276 CONFLICT SEQADV 1H5N ILE A 236 UNP Q52675 VAL 278 CONFLICT SEQADV 1H5N ASP A 280 UNP Q52675 MET 322 CONFLICT SEQADV 1H5N GLU A 294 UNP Q52675 SER 336 CONFLICT SEQADV 1H5N GLY A 295 UNP Q52675 ASP 337 CONFLICT SEQADV 1H5N GLU A 312 UNP Q52675 ILE 354 CONFLICT SEQADV 1H5N ALA A 374 UNP Q52675 SER 416 CONFLICT SEQADV 1H5N VAL A 456 UNP Q52675 ILE 498 CONFLICT SEQADV 1H5N ALA A 526 UNP Q52675 LYS 568 CONFLICT SEQADV 1H5N ALA A 552 UNP Q52675 GLY 594 CONFLICT SEQADV 1H5N GLN A 555 UNP Q52675 GLU 597 CONFLICT SEQADV 1H5N SER C 39 UNP Q52675 THR 81 CONFLICT SEQADV 1H5N ALA C 43 UNP Q52675 GLU 85 CONFLICT SEQADV 1H5N GLU C 107 UNP Q52675 GLN 149 CONFLICT SEQADV 1H5N GLU C 234 UNP Q52675 ASP 276 CONFLICT SEQADV 1H5N ILE C 236 UNP Q52675 VAL 278 CONFLICT SEQADV 1H5N ASP C 280 UNP Q52675 MET 322 CONFLICT SEQADV 1H5N GLU C 294 UNP Q52675 SER 336 CONFLICT SEQADV 1H5N GLY C 295 UNP Q52675 ASP 337 CONFLICT SEQADV 1H5N GLU C 312 UNP Q52675 ILE 354 CONFLICT SEQADV 1H5N ALA C 374 UNP Q52675 SER 416 CONFLICT SEQADV 1H5N VAL C 456 UNP Q52675 ILE 498 CONFLICT SEQADV 1H5N ALA C 526 UNP Q52675 LYS 568 CONFLICT SEQADV 1H5N ALA C 552 UNP Q52675 GLY 594 CONFLICT SEQADV 1H5N GLN C 555 UNP Q52675 GLU 597 CONFLICT SEQRES 1 A 823 MET THR LYS PHE SER GLY ASN GLU LEU ARG ALA GLU LEU SEQRES 2 A 823 TYR ARG ARG ALA PHE LEU SER TYR SER VAL ALA PRO GLY SEQRES 3 A 823 ALA LEU GLY MET PHE GLY ARG SER LEU LEU ALA LYS GLY SEQRES 4 A 823 ALA ARG ALA GLU ALA LEU ALA ASN GLY THR VAL MET SER SEQRES 5 A 823 GLY SER HIS TRP GLY VAL PHE THR ALA THR VAL GLU ASN SEQRES 6 A 823 GLY ARG ALA THR ALA PHE THR PRO TRP GLU LYS ASP PRO SEQRES 7 A 823 HIS PRO SER PRO MET LEU ALA GLY VAL LEU ASP SER ILE SEQRES 8 A 823 TYR SER PRO THR ARG ILE LYS TYR PRO MET VAL ARG ARG SEQRES 9 A 823 GLU PHE LEU GLU LYS GLY VAL ASN ALA ASP ARG SER THR SEQRES 10 A 823 ARG GLY ASN GLY ASP PHE VAL ARG VAL SER TRP ASP GLN SEQRES 11 A 823 ALA LEU ASP LEU VAL ALA ALA GLU VAL LYS ARG VAL GLU SEQRES 12 A 823 GLU THR TYR GLY PRO GLU GLY VAL PHE GLY GLY SER TYR SEQRES 13 A 823 GLY TRP LYS SER PRO GLY ARG LEU HIS ASN CYS THR THR SEQRES 14 A 823 LEU LEU ARG ARG MET LEU THR LEU ALA GLY GLY TYR VAL SEQRES 15 A 823 ASN GLY ALA GLY ASP TYR SER THR GLY ALA ALA GLN VAL SEQRES 16 A 823 ILE MET PRO HIS VAL VAL GLY THR LEU GLU VAL TYR GLU SEQRES 17 A 823 GLN GLN THR ALA TRP PRO VAL LEU ALA GLU ASN THR GLU SEQRES 18 A 823 VAL MET VAL PHE TRP ALA ALA ASP PRO ILE LYS THR SER SEQRES 19 A 823 GLN ILE GLY TRP VAL ILE PRO GLU HIS GLY ALA TYR PRO SEQRES 20 A 823 GLY LEU GLU ALA LEU LYS ALA LYS GLY THR LYS VAL ILE SEQRES 21 A 823 VAL ILE ASP PRO VAL ARG THR LYS THR VAL GLU PHE PHE SEQRES 22 A 823 GLY ALA GLU HIS ILE THR PRO LYS PRO GLN THR ASP VAL SEQRES 23 A 823 ALA ILE MET LEU GLY MET ALA HIS THR LEU VAL ALA GLU SEQRES 24 A 823 ASP LEU TYR ASP LYS ASP PHE ILE ALA ASN TYR THR SER SEQRES 25 A 823 GLY PHE ASP LYS PHE LEU PRO TYR LEU ASP GLY GLU THR SEQRES 26 A 823 ASP SER THR PRO LYS THR ALA GLU TRP ALA GLU GLY ILE SEQRES 27 A 823 SER GLY VAL PRO ALA GLU THR ILE LYS GLU LEU ALA ARG SEQRES 28 A 823 LEU PHE GLU SER LYS ARG THR MET LEU ALA ALA GLY TRP SEQRES 29 A 823 SER MET GLN ARG MET HIS HIS GLY GLU GLN ALA HIS TRP SEQRES 30 A 823 MET LEU VAL THR LEU ALA SER MET LEU GLY GLN ILE GLY SEQRES 31 A 823 LEU PRO GLY GLY GLY PHE GLY LEU SER TYR HIS TYR SER SEQRES 32 A 823 GLY GLY GLY THR PRO SER THR SER GLY PRO ALA LEU ALA SEQRES 33 A 823 GLY ILE THR ASP GLY GLY ALA ALA THR LYS GLY PRO GLU SEQRES 34 A 823 TRP LEU ALA ALA SER GLY ALA SER VAL ILE PRO VAL ALA SEQRES 35 A 823 ARG VAL VAL ASP MET LEU GLU ASN PRO GLY ALA GLU PHE SEQRES 36 A 823 ASP PHE ASN GLY THR ARG SER LYS PHE PRO ASP VAL LYS SEQRES 37 A 823 MET ALA TYR TRP VAL GLY GLY ASN PRO PHE VAL HIS HIS SEQRES 38 A 823 GLN ASP ARG ASN ARG MET VAL LYS ALA TRP GLU LYS LEU SEQRES 39 A 823 GLU THR PHE VAL VAL HIS ASP PHE GLN TRP THR PRO THR SEQRES 40 A 823 ALA ARG HIS ALA ASP ILE VAL LEU PRO ALA THR THR SER SEQRES 41 A 823 TYR GLU ARG ASN ASP ILE GLU THR ILE GLY ASP TYR SER SEQRES 42 A 823 ASN THR GLY ILE LEU ALA MET LYS LYS ILE VAL GLU PRO SEQRES 43 A 823 LEU TYR GLU ALA ARG SER ASP TYR ASP ILE PHE ALA ALA SEQRES 44 A 823 VAL ALA GLU ARG LEU GLY LYS GLY ALA GLU PHE THR GLU SEQRES 45 A 823 GLY LYS ASP GLU MET GLY TRP ILE LYS SER PHE TYR ASP SEQRES 46 A 823 ASP ALA ALA LYS GLN GLY LYS ALA ALA GLY VAL GLN MET SEQRES 47 A 823 PRO ALA PHE ASP ALA PHE TRP ALA GLU GLY ILE VAL GLU SEQRES 48 A 823 PHE PRO VAL THR ASP GLY ALA ASP PHE VAL ARG TYR ALA SEQRES 49 A 823 SER PHE ARG GLU ASP PRO LEU LEU ASN PRO LEU GLY THR SEQRES 50 A 823 PRO THR GLY LEU ILE GLU ILE TYR SER LYS ASN ILE GLU SEQRES 51 A 823 LYS MET GLY TYR ASP ASP CYS PRO ALA HIS PRO THR TRP SEQRES 52 A 823 MET GLU PRO LEU GLU ARG LEU ASP GLY PRO GLY ALA LYS SEQRES 53 A 823 TYR PRO LEU HIS ILE ALA ALA SER HIS PRO PHE ASN ARG SEQRES 54 A 823 LEU HIS SER GLN LEU ASN GLY THR VAL LEU ARG GLU GLY SEQRES 55 A 823 TYR ALA VAL GLN GLY HIS GLU PRO CYS LEU MET HIS PRO SEQRES 56 A 823 ASP ASP ALA ALA ALA ARG GLY ILE ALA ASP GLY ASP VAL SEQRES 57 A 823 VAL ARG VAL HIS ASN ASP ARG GLY GLN ILE LEU THR GLY SEQRES 58 A 823 VAL LYS VAL THR ASP ALA VAL MET LYS GLY VAL ILE GLN SEQRES 59 A 823 ILE TYR GLU GLY GLY TRP TYR ASP PRO SER ASP VAL THR SEQRES 60 A 823 GLU PRO GLY THR LEU ASP LYS TYR GLY ASP VAL ASN VAL SEQRES 61 A 823 LEU SER ALA ASP ILE GLY THR SER LYS LEU ALA GLN GLY SEQRES 62 A 823 ASN CYS GLY GLN THR VAL LEU ALA GLU VAL GLU LYS TYR SEQRES 63 A 823 THR GLY PRO ALA VAL THR LEU THR GLY PHE VAL ALA PRO SEQRES 64 A 823 LYS ALA ALA GLU SEQRES 1 C 823 MET THR LYS PHE SER GLY ASN GLU LEU ARG ALA GLU LEU SEQRES 2 C 823 TYR ARG ARG ALA PHE LEU SER TYR SER VAL ALA PRO GLY SEQRES 3 C 823 ALA LEU GLY MET PHE GLY ARG SER LEU LEU ALA LYS GLY SEQRES 4 C 823 ALA ARG ALA GLU ALA LEU ALA ASN GLY THR VAL MET SER SEQRES 5 C 823 GLY SER HIS TRP GLY VAL PHE THR ALA THR VAL GLU ASN SEQRES 6 C 823 GLY ARG ALA THR ALA PHE THR PRO TRP GLU LYS ASP PRO SEQRES 7 C 823 HIS PRO SER PRO MET LEU ALA GLY VAL LEU ASP SER ILE SEQRES 8 C 823 TYR SER PRO THR ARG ILE LYS TYR PRO MET VAL ARG ARG SEQRES 9 C 823 GLU PHE LEU GLU LYS GLY VAL ASN ALA ASP ARG SER THR SEQRES 10 C 823 ARG GLY ASN GLY ASP PHE VAL ARG VAL SER TRP ASP GLN SEQRES 11 C 823 ALA LEU ASP LEU VAL ALA ALA GLU VAL LYS ARG VAL GLU SEQRES 12 C 823 GLU THR TYR GLY PRO GLU GLY VAL PHE GLY GLY SER TYR SEQRES 13 C 823 GLY TRP LYS SER PRO GLY ARG LEU HIS ASN CYS THR THR SEQRES 14 C 823 LEU LEU ARG ARG MET LEU THR LEU ALA GLY GLY TYR VAL SEQRES 15 C 823 ASN GLY ALA GLY ASP TYR SER THR GLY ALA ALA GLN VAL SEQRES 16 C 823 ILE MET PRO HIS VAL VAL GLY THR LEU GLU VAL TYR GLU SEQRES 17 C 823 GLN GLN THR ALA TRP PRO VAL LEU ALA GLU ASN THR GLU SEQRES 18 C 823 VAL MET VAL PHE TRP ALA ALA ASP PRO ILE LYS THR SER SEQRES 19 C 823 GLN ILE GLY TRP VAL ILE PRO GLU HIS GLY ALA TYR PRO SEQRES 20 C 823 GLY LEU GLU ALA LEU LYS ALA LYS GLY THR LYS VAL ILE SEQRES 21 C 823 VAL ILE ASP PRO VAL ARG THR LYS THR VAL GLU PHE PHE SEQRES 22 C 823 GLY ALA GLU HIS ILE THR PRO LYS PRO GLN THR ASP VAL SEQRES 23 C 823 ALA ILE MET LEU GLY MET ALA HIS THR LEU VAL ALA GLU SEQRES 24 C 823 ASP LEU TYR ASP LYS ASP PHE ILE ALA ASN TYR THR SER SEQRES 25 C 823 GLY PHE ASP LYS PHE LEU PRO TYR LEU ASP GLY GLU THR SEQRES 26 C 823 ASP SER THR PRO LYS THR ALA GLU TRP ALA GLU GLY ILE SEQRES 27 C 823 SER GLY VAL PRO ALA GLU THR ILE LYS GLU LEU ALA ARG SEQRES 28 C 823 LEU PHE GLU SER LYS ARG THR MET LEU ALA ALA GLY TRP SEQRES 29 C 823 SER MET GLN ARG MET HIS HIS GLY GLU GLN ALA HIS TRP SEQRES 30 C 823 MET LEU VAL THR LEU ALA SER MET LEU GLY GLN ILE GLY SEQRES 31 C 823 LEU PRO GLY GLY GLY PHE GLY LEU SER TYR HIS TYR SER SEQRES 32 C 823 GLY GLY GLY THR PRO SER THR SER GLY PRO ALA LEU ALA SEQRES 33 C 823 GLY ILE THR ASP GLY GLY ALA ALA THR LYS GLY PRO GLU SEQRES 34 C 823 TRP LEU ALA ALA SER GLY ALA SER VAL ILE PRO VAL ALA SEQRES 35 C 823 ARG VAL VAL ASP MET LEU GLU ASN PRO GLY ALA GLU PHE SEQRES 36 C 823 ASP PHE ASN GLY THR ARG SER LYS PHE PRO ASP VAL LYS SEQRES 37 C 823 MET ALA TYR TRP VAL GLY GLY ASN PRO PHE VAL HIS HIS SEQRES 38 C 823 GLN ASP ARG ASN ARG MET VAL LYS ALA TRP GLU LYS LEU SEQRES 39 C 823 GLU THR PHE VAL VAL HIS ASP PHE GLN TRP THR PRO THR SEQRES 40 C 823 ALA ARG HIS ALA ASP ILE VAL LEU PRO ALA THR THR SER SEQRES 41 C 823 TYR GLU ARG ASN ASP ILE GLU THR ILE GLY ASP TYR SER SEQRES 42 C 823 ASN THR GLY ILE LEU ALA MET LYS LYS ILE VAL GLU PRO SEQRES 43 C 823 LEU TYR GLU ALA ARG SER ASP TYR ASP ILE PHE ALA ALA SEQRES 44 C 823 VAL ALA GLU ARG LEU GLY LYS GLY ALA GLU PHE THR GLU SEQRES 45 C 823 GLY LYS ASP GLU MET GLY TRP ILE LYS SER PHE TYR ASP SEQRES 46 C 823 ASP ALA ALA LYS GLN GLY LYS ALA ALA GLY VAL GLN MET SEQRES 47 C 823 PRO ALA PHE ASP ALA PHE TRP ALA GLU GLY ILE VAL GLU SEQRES 48 C 823 PHE PRO VAL THR ASP GLY ALA ASP PHE VAL ARG TYR ALA SEQRES 49 C 823 SER PHE ARG GLU ASP PRO LEU LEU ASN PRO LEU GLY THR SEQRES 50 C 823 PRO THR GLY LEU ILE GLU ILE TYR SER LYS ASN ILE GLU SEQRES 51 C 823 LYS MET GLY TYR ASP ASP CYS PRO ALA HIS PRO THR TRP SEQRES 52 C 823 MET GLU PRO LEU GLU ARG LEU ASP GLY PRO GLY ALA LYS SEQRES 53 C 823 TYR PRO LEU HIS ILE ALA ALA SER HIS PRO PHE ASN ARG SEQRES 54 C 823 LEU HIS SER GLN LEU ASN GLY THR VAL LEU ARG GLU GLY SEQRES 55 C 823 TYR ALA VAL GLN GLY HIS GLU PRO CYS LEU MET HIS PRO SEQRES 56 C 823 ASP ASP ALA ALA ALA ARG GLY ILE ALA ASP GLY ASP VAL SEQRES 57 C 823 VAL ARG VAL HIS ASN ASP ARG GLY GLN ILE LEU THR GLY SEQRES 58 C 823 VAL LYS VAL THR ASP ALA VAL MET LYS GLY VAL ILE GLN SEQRES 59 C 823 ILE TYR GLU GLY GLY TRP TYR ASP PRO SER ASP VAL THR SEQRES 60 C 823 GLU PRO GLY THR LEU ASP LYS TYR GLY ASP VAL ASN VAL SEQRES 61 C 823 LEU SER ALA ASP ILE GLY THR SER LYS LEU ALA GLN GLY SEQRES 62 C 823 ASN CYS GLY GLN THR VAL LEU ALA GLU VAL GLU LYS TYR SEQRES 63 C 823 THR GLY PRO ALA VAL THR LEU THR GLY PHE VAL ALA PRO SEQRES 64 C 823 LYS ALA ALA GLU HET PGD A1782 47 HET PGD A1783 47 HET 6MO A1784 1 HET SO4 A1785 5 HET PGD C1782 47 HET PGD C1783 47 HET 6MO C1784 1 HET SO4 C1785 5 HETNAM PGD 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8- HETNAM 2 PGD OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE HETNAM 3 PGD DINUCLEOTIDE HETNAM 6MO MOLYBDENUM(VI) ION HETNAM SO4 SULFATE ION FORMUL 3 PGD 4(C20 H24 N10 O13 P2 S2) FORMUL 5 6MO 2(MO 6+) FORMUL 6 SO4 2(O4 S 2-) FORMUL 11 HOH *1234(H2 O) HELIX 1 1 MET A 41 SER A 51 1 11 HELIX 2 2 ARG A 62 GLY A 68 1 7 HELIX 3 3 VAL A 69 ALA A 71 5 3 HELIX 4 4 ASP A 72 ARG A 76 5 5 HELIX 5 5 SER A 85 GLY A 105 1 21 HELIX 6 6 ASN A 124 ALA A 136 1 13 HELIX 7 7 ALA A 150 VAL A 159 1 10 HELIX 8 8 ALA A 170 THR A 178 1 9 HELIX 9 9 ASP A 187 SER A 192 1 6 HELIX 10 10 GLY A 202 LYS A 213 1 12 HELIX 11 11 THR A 225 GLY A 232 1 8 HELIX 12 12 THR A 242 GLU A 257 1 16 HELIX 13 13 ASP A 261 TYR A 268 1 8 HELIX 14 14 GLY A 271 ASP A 280 1 10 HELIX 15 15 THR A 289 GLY A 298 1 10 HELIX 16 16 PRO A 300 LYS A 314 1 15 HELIX 17 17 TRP A 322 ARG A 326 5 5 HELIX 18 18 GLU A 331 GLY A 345 1 15 HELIX 19 19 ARG A 401 ASN A 408 1 8 HELIX 20 20 ASN A 434 HIS A 439 1 6 HELIX 21 21 ASP A 441 TRP A 449 1 9 HELIX 22 22 GLU A 450 LEU A 452 5 3 HELIX 23 23 THR A 463 HIS A 468 1 6 HELIX 24 24 THR A 477 ARG A 481 5 5 HELIX 25 25 SER A 510 LEU A 522 1 13 HELIX 26 26 LYS A 524 GLU A 530 1 7 HELIX 27 27 ASP A 533 ALA A 552 1 20 HELIX 28 28 ALA A 558 GLY A 566 1 9 HELIX 29 29 ASP A 574 PHE A 578 5 5 HELIX 30 30 TYR A 581 ASP A 587 1 7 HELIX 31 31 SER A 604 GLY A 611 1 8 HELIX 32 32 THR A 655 TYR A 661 5 7 HELIX 33 33 HIS A 672 ALA A 678 1 7 HELIX 34 34 ASP A 735 LEU A 739 5 5 HELIX 35 35 PRO A 777 GLU A 781 5 5 HELIX 36 36 MET C 41 SER C 51 1 11 HELIX 37 37 ARG C 62 GLY C 68 1 7 HELIX 38 38 VAL C 69 ALA C 71 5 3 HELIX 39 39 ASP C 72 ARG C 76 5 5 HELIX 40 40 SER C 85 GLY C 105 1 21 HELIX 41 41 ASN C 124 ALA C 136 1 13 HELIX 42 42 ALA C 150 VAL C 159 1 10 HELIX 43 43 ALA C 170 THR C 178 1 9 HELIX 44 44 ASP C 187 SER C 192 1 6 HELIX 45 45 GLY C 202 LYS C 213 1 12 HELIX 46 46 THR C 225 GLY C 232 1 8 HELIX 47 47 THR C 242 GLU C 257 1 16 HELIX 48 48 ASP C 261 TYR C 268 1 8 HELIX 49 49 GLY C 271 ASP C 280 1 10 HELIX 50 50 THR C 289 GLY C 298 1 10 HELIX 51 51 PRO C 300 LYS C 314 1 15 HELIX 52 52 TRP C 322 ARG C 326 5 5 HELIX 53 53 GLY C 330 GLY C 345 1 16 HELIX 54 54 PRO C 398 ALA C 400 5 3 HELIX 55 55 ARG C 401 ASN C 408 1 8 HELIX 56 56 ASN C 434 HIS C 439 1 6 HELIX 57 57 ASP C 441 TRP C 449 1 9 HELIX 58 58 GLU C 450 LEU C 452 5 3 HELIX 59 59 THR C 463 HIS C 468 1 6 HELIX 60 60 THR C 477 ARG C 481 5 5 HELIX 61 61 SER C 510 LEU C 522 1 13 HELIX 62 62 LYS C 524 GLU C 530 1 7 HELIX 63 63 ASP C 533 ALA C 552 1 20 HELIX 64 64 ALA C 558 GLY C 566 1 9 HELIX 65 65 ASP C 574 PHE C 578 5 5 HELIX 66 66 TYR C 581 ASP C 587 1 7 HELIX 67 67 SER C 604 GLY C 611 1 8 HELIX 68 68 THR C 655 TYR C 661 5 7 HELIX 69 69 HIS C 672 ARG C 679 1 8 HELIX 70 70 ASP C 735 LEU C 739 5 5 HELIX 71 71 PRO C 777 GLU C 781 5 5 SHEET 1 AA 3 GLY A 6 SER A 12 0 SHEET 2 AA 3 GLY A 15 GLU A 22 -1 O GLY A 15 N SER A 12 SHEET 3 AA 3 ARG A 25 PRO A 31 -1 O ARG A 25 N GLU A 22 SHEET 1 AB 6 PHE A 81 ARG A 83 0 SHEET 2 AB 6 MET A 59 ARG A 61 -1 O VAL A 60 N VAL A 82 SHEET 3 AB 6 ILE A 471 PRO A 474 -1 O VAL A 472 N MET A 59 SHEET 4 AB 6 THR A 454 ASP A 459 1 O VAL A 457 N LEU A 473 SHEET 5 AB 6 MET A 427 VAL A 431 1 O ALA A 428 N VAL A 456 SHEET 6 AB 6 VAL A 109 PHE A 110 1 O PHE A 110 N TYR A 429 SHEET 1 AC 2 ASN A 141 ALA A 143 0 SHEET 2 AC 2 VAL A 396 PRO A 398 1 O ILE A 397 N ALA A 143 SHEET 1 AD 5 GLU A 234 ILE A 236 0 SHEET 2 AD 5 LYS A 216 ILE A 220 1 O VAL A 217 N GLU A 234 SHEET 3 AD 5 VAL A 180 TRP A 184 1 O MET A 181 N ILE A 218 SHEET 4 AD 5 THR A 316 ALA A 320 1 O MET A 317 N VAL A 182 SHEET 5 AD 5 GLY A 353 GLY A 355 1 O GLY A 353 N LEU A 318 SHEET 1 AE 2 THR A 269 SER A 270 0 SHEET 2 AE 2 ILE A 600 GLU A 601 1 O ILE A 600 N SER A 270 SHEET 1 AF 2 GLU A 412 PHE A 415 0 SHEET 2 AF 2 THR A 418 LYS A 421 -1 O THR A 418 N PHE A 415 SHEET 1 AG 3 ASP A 483 ILE A 487 0 SHEET 2 AG 3 GLY A 494 MET A 498 -1 O GLY A 494 N ILE A 487 SHEET 3 AG 3 ILE A 567 GLU A 569 -1 O VAL A 568 N ILE A 495 SHEET 1 AH 7 LEU A 637 ALA A 640 0 SHEET 2 AH 7 LEU A 758 LYS A 763 -1 O ALA A 759 N LEU A 637 SHEET 3 AH 7 VAL A 686 HIS A 690 -1 O ARG A 688 N GLU A 762 SHEET 4 AH 7 GLN A 695 VAL A 702 -1 O ILE A 696 N VAL A 689 SHEET 5 AH 7 PRO A 668 MET A 671 1 O CYS A 669 N LYS A 701 SHEET 6 AH 7 VAL A 710 GLN A 712 -1 O GLN A 712 N LEU A 670 SHEET 7 AH 7 LEU A 637 ALA A 640 1 O HIS A 638 N ILE A 711 SHEET 1 CA 3 GLY C 6 SER C 12 0 SHEET 2 CA 3 GLY C 15 GLU C 22 -1 O GLY C 15 N SER C 12 SHEET 3 CA 3 ARG C 25 PRO C 31 -1 O ARG C 25 N GLU C 22 SHEET 1 CB 6 PHE C 81 ARG C 83 0 SHEET 2 CB 6 MET C 59 ARG C 61 -1 O VAL C 60 N VAL C 82 SHEET 3 CB 6 ILE C 471 PRO C 474 -1 O VAL C 472 N MET C 59 SHEET 4 CB 6 THR C 454 ASP C 459 1 O VAL C 457 N LEU C 473 SHEET 5 CB 6 MET C 427 VAL C 431 1 O ALA C 428 N VAL C 456 SHEET 6 CB 6 VAL C 109 PHE C 110 1 O PHE C 110 N TYR C 429 SHEET 1 CC 5 GLU C 234 ILE C 236 0 SHEET 2 CC 5 LYS C 216 ILE C 220 1 O VAL C 217 N GLU C 234 SHEET 3 CC 5 VAL C 180 TRP C 184 1 O MET C 181 N ILE C 218 SHEET 4 CC 5 THR C 316 ALA C 320 1 O MET C 317 N VAL C 182 SHEET 5 CC 5 GLY C 353 GLY C 355 1 O GLY C 353 N LEU C 318 SHEET 1 CD 2 THR C 269 SER C 270 0 SHEET 2 CD 2 ILE C 600 GLU C 601 1 O ILE C 600 N SER C 270 SHEET 1 CE 2 GLU C 412 PHE C 415 0 SHEET 2 CE 2 THR C 418 LYS C 421 -1 O THR C 418 N PHE C 415 SHEET 1 CF 3 ASP C 483 ILE C 487 0 SHEET 2 CF 3 GLY C 494 MET C 498 -1 O GLY C 494 N ILE C 487 SHEET 3 CF 3 ILE C 567 GLU C 569 -1 O VAL C 568 N ILE C 495 SHEET 1 CG 7 LEU C 637 ALA C 640 0 SHEET 2 CG 7 LEU C 758 LYS C 763 -1 O ALA C 759 N LEU C 637 SHEET 3 CG 7 VAL C 686 HIS C 690 -1 O ARG C 688 N GLU C 762 SHEET 4 CG 7 GLN C 695 VAL C 702 -1 O ILE C 696 N VAL C 689 SHEET 5 CG 7 PRO C 668 MET C 671 1 O CYS C 669 N LYS C 701 SHEET 6 CG 7 VAL C 710 GLN C 712 -1 O GLN C 712 N LEU C 670 SHEET 7 CG 7 LEU C 637 ALA C 640 1 O HIS C 638 N ILE C 711 LINK OG SER A 147 MO 6MO A1784 1555 1555 1.85 LINK S12 PGD A1782 MO 6MO A1784 1555 1555 2.49 LINK S13 PGD A1782 MO 6MO A1784 1555 1555 2.41 LINK S12 PGD A1783 MO 6MO A1784 1555 1555 2.47 LINK S13 PGD A1783 MO 6MO A1784 1555 1555 2.44 LINK OG SER C 147 MO 6MO C1784 1555 1555 1.87 LINK S13 PGD C1782 MO 6MO C1784 1555 1555 2.40 LINK S12 PGD C1782 MO 6MO C1784 1555 1555 2.49 LINK S13 PGD C1783 MO 6MO C1784 1555 1555 2.48 LINK S12 PGD C1783 MO 6MO C1784 1555 1555 2.47 SITE 1 AC1 6 LYS A 117 ARG A 121 ASN A 124 TRP A 196 SITE 2 AC1 6 HOH A2133 HOH A2652 SITE 1 AC2 7 LYS C 117 ARG C 121 ASN C 124 TRP C 196 SITE 2 AC2 7 HOH C2117 HOH C2581 HOH C2582 SITE 1 AC3 36 TYR A 114 GLY A 115 TRP A 116 LYS A 117 SITE 2 AC3 36 SER A 118 TYR A 146 SER A 147 ARG A 326 SITE 3 AC3 36 GLY A 432 GLY A 433 ASN A 434 HIS A 438 SITE 4 AC3 36 GLN A 440 HIS A 458 ASP A 459 PHE A 460 SITE 5 AC3 36 THR A 463 ALA A 475 ARG A 481 ASP A 511 SITE 6 AC3 36 ALA A 641 HIS A 643 LEU A 648 HIS A 649 SITE 7 AC3 36 SER A 650 GLN A 651 GLU A 715 ASN A 737 SITE 8 AC3 36 GLY A 754 GLN A 755 PGD A1783 6MO A1784 SITE 9 AC3 36 HOH A2131 HOH A2592 HOH A2647 HOH A2648 SITE 1 AC4 33 TRP A 116 SER A 147 ALA A 185 LYS A 190 SITE 2 AC4 33 THR A 191 GLN A 193 ILE A 194 ILE A 220 SITE 3 AC4 33 ASP A 221 PRO A 222 THR A 225 PRO A 240 SITE 4 AC4 33 GLN A 241 ASP A 243 GLY A 321 TRP A 322 SITE 5 AC4 33 SER A 323 ARG A 326 MET A 327 HIS A 359 SITE 6 AC4 33 SER A 642 HIS A 643 PRO A 644 ARG A 647 SITE 7 AC4 33 LEU A 648 HIS A 649 GLN A 755 PGD A1782 SITE 8 AC4 33 6MO A1784 HOH A2186 HOH A2533 HOH A2623 SITE 9 AC4 33 HOH A2650 SITE 1 AC5 3 SER A 147 PGD A1782 PGD A1783 SITE 1 AC6 35 TYR C 114 GLY C 115 TRP C 116 LYS C 117 SITE 2 AC6 35 SER C 118 TYR C 146 SER C 147 ARG C 326 SITE 3 AC6 35 GLY C 432 GLY C 433 ASN C 434 HIS C 438 SITE 4 AC6 35 GLN C 440 HIS C 458 ASP C 459 PHE C 460 SITE 5 AC6 35 THR C 463 ALA C 475 ARG C 481 ASP C 511 SITE 6 AC6 35 ALA C 641 HIS C 643 HIS C 649 SER C 650 SITE 7 AC6 35 GLN C 651 GLU C 715 ASN C 737 GLY C 754 SITE 8 AC6 35 GLN C 755 PGD C1783 6MO C1784 HOH C2524 SITE 9 AC6 35 HOH C2577 HOH C2578 HOH C2579 SITE 1 AC7 33 TRP C 116 SER C 147 ALA C 185 LYS C 190 SITE 2 AC7 33 THR C 191 GLN C 193 ILE C 194 ILE C 220 SITE 3 AC7 33 ASP C 221 PRO C 222 THR C 225 PRO C 240 SITE 4 AC7 33 GLN C 241 ASP C 243 GLY C 321 TRP C 322 SITE 5 AC7 33 SER C 323 ARG C 326 MET C 327 HIS C 359 SITE 6 AC7 33 SER C 642 HIS C 643 PRO C 644 ARG C 647 SITE 7 AC7 33 LEU C 648 HIS C 649 GLN C 755 PGD C1782 SITE 8 AC7 33 6MO C1784 HOH C2161 HOH C2469 HOH C2471 SITE 9 AC7 33 HOH C2580 SITE 1 AC8 3 SER C 147 PGD C1782 PGD C1783 CRYST1 68.800 116.100 230.400 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008613 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004340 0.00000 MTRIX1 1 0.033180 -0.074310 -0.996680 45.37510 1 MTRIX2 1 0.515290 -0.853200 0.080760 86.18323 1 MTRIX3 1 -0.856370 -0.516260 0.009990 33.07430 1