HEADER LUMINESCENT PROTEIN 22-JUN-01 1H6R TITLE THE OXIDIZED STATE OF A REDOX SENSITIVE VARIANT OF GREEN FLUORESCENT TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: GFP; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 ORGAN: PHOTOGENIC ORGAN; SOURCE 6 TISSUE: CIRCUMORAL RING CANAL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET24; SOURCE 12 OTHER_DETAILS: SYNTHETIC GENE KEYWDS LUMINESCENT PROTEIN, LUMINESCENCE, GREEN FLUORESCENT PROTEIN, YELLOW- KEYWDS 2 EMISSION EXPDTA X-RAY DIFFRACTION AUTHOR H.OSTERGAARD,A.HENRIKSEN,F.G.HANSEN,J.R.WINTHER REVDAT 7 13-DEC-23 1H6R 1 REMARK LINK REVDAT 6 23-OCT-19 1H6R 1 SEQADV LINK REVDAT 5 17-JAN-18 1H6R 1 REMARK REVDAT 4 23-JUN-09 1H6R 1 HEADER REMARK SEQADV ATOM REVDAT 4 2 1 TER REVDAT 3 24-FEB-09 1H6R 1 VERSN REVDAT 2 01-AUG-03 1H6R 1 SEQRES HET HETNAM ATOM REVDAT 2 2 1 HETATM TER CONECT REVDAT 1 15-NOV-01 1H6R 0 JRNL AUTH H.OSTERGAARD,A.HENRIKSEN,F.G.HANSEN,J.R.WINTHER JRNL TITL SHEDDING LIGHT ON DISULFIDE BOND FORMATION: ENGINEERING A JRNL TITL 2 REDOX SWITCH IN GREEN FLUORESCENT PROTEIN JRNL REF EMBO J. V. 20 5853 2001 JRNL REFN ISSN 0261-4189 JRNL PMID 11689426 JRNL DOI 10.1093/EMBOJ/20.21.5853 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MLF REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 689676.360 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.1 REMARK 3 NUMBER OF REFLECTIONS : 109885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5546 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 14022 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 778 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5499 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.34000 REMARK 3 B22 (A**2) : 2.38000 REMARK 3 B33 (A**2) : -1.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.160 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.930 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.290 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.530 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 43.49 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: A SIGNIFICANT 2FO-FC AND FO-FC DENSITY REMARK 3 WAS OBSERVED WITH A CENTER 1.5 ANGSTROM FROM CYS 70 SG AND IT IS REMARK 3 POSSIBLE THAT CYS 70 IS IN AN OXIDIZED STATE. REMARK 4 REMARK 4 1H6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1290008206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0362 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 116321 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 78.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1YFP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, PH 8.0, 100 MM MGCL2, REMARK 280 AND 14% PEG4000, PH 8.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.93200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.27550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.95750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.27550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.93200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.95750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CHAIN A, B, C ENGINEERED MUTATION SER65ALA,CYS48VAL,VAL68LEU, REMARK 400 SER72ALA,GLN80ARG,ASN149CYS,MET153VAL,SER202CYS,THR203TYR, REMARK 400 ASP234HIS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 465 MET B 1 REMARK 465 MET B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 TYR B 237 REMARK 465 LYS B 238 REMARK 465 MET C 1 REMARK 465 MET C 233 REMARK 465 ASP C 234 REMARK 465 GLU C 235 REMARK 465 LEU C 236 REMARK 465 TYR C 237 REMARK 465 LYS C 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 232 CA C O REMARK 470 GLY B 232 CA C O REMARK 470 GLY C 232 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP C 173 -2.89 -55.59 REMARK 500 HIS C 231 -45.57 -169.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2040 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH B2050 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH C2033 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH C2039 DISTANCE = 6.15 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA", "BA", "CA" IN CHAIN A, B, C REMARK 700 RESPECTIVELY ON SHEET RECORDS BELOW ARE ACTUALLY AN 11-STRANDED REMARK 700 BARREL THIS IS REPRESENTED BY A 12-STRANDED SHEET IN WHICH THE REMARK 700 FIRST AND LAST STRANDS ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1232 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1B9C RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN MUTANT F99S, M153T AND V163A REMARK 900 RELATED ID: 1BFP RELATED DB: PDB REMARK 900 BLUE VARIANT OF GREEN FLUORESCENT PROTEIN REMARK 900 RELATED ID: 1C4F RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN S65T AT PH 4.6 REMARK 900 RELATED ID: 1EMB RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREAVICTORIA, GLN 80 REMARK 900 REPLACED WITH ARG REMARK 900 RELATED ID: 1EMC RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1EME RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1EMF RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1EMG RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN (65-67 REPLACED BY CRO, S65TSUBSTITUTION, REMARK 900 Q80R) REMARK 900 RELATED ID: 1EMK RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1EML RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1EMM RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 1F09 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP- REMARK 900 H148Q WITH TWO BOUND IODIDES REMARK 900 RELATED ID: 1F0B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP- REMARK 900 H148Q REMARK 900 RELATED ID: 1HCJ RELATED DB: PDB REMARK 900 PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT REMARK 900 PROTEIN REMARK 900 RELATED ID: 1YFP RELATED DB: PDB REMARK 900 STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP REMARK 900 RELATED ID: 2EMD RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 2EMN RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 900 RELATED ID: 2EMO RELATED DB: PDB REMARK 900 GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT REMARK 999 REMARK 999 SEQUENCE REMARK 999 MODRES: 1H6R CRO() 66() THE FLUOROPHORE IS GENERATED BY AN REMARK 999 AUTOCATALYTIC CYCLIZATION OF THE POLYPEPTIDE BACKBONE OF REMARK 999 ALA 65, TYR 66, GLY 67. RESIDUES 65, 66, 67 ARE NOT REMARK 999 PRESENT IN THE ENTRY, ARE INSTEAD REPLACED WITH PIA 66. DBREF 1H6R A 1 238 UNP P42212 GFP_AEQVI 1 238 DBREF 1H6R B 1 238 UNP P42212 GFP_AEQVI 1 238 DBREF 1H6R C 1 238 UNP P42212 GFP_AEQVI 1 238 SEQADV 1H6R PIA A 66 UNP P42212 ALA 65 CHROMOPHORE SEQADV 1H6R PIA A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 1H6R PIA A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 1H6R PIA B 66 UNP P42212 ALA 65 CHROMOPHORE SEQADV 1H6R PIA B 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 1H6R PIA B 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 1H6R PIA C 66 UNP P42212 ALA 65 CHROMOPHORE SEQADV 1H6R PIA C 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 1H6R PIA C 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 1H6R VAL A 48 UNP P42212 CYS 48 ENGINEERED MUTATION SEQADV 1H6R VAL B 48 UNP P42212 CYS 48 ENGINEERED MUTATION SEQADV 1H6R VAL C 48 UNP P42212 CYS 48 ENGINEERED MUTATION SEQADV 1H6R LEU A 68 UNP P42212 VAL 68 ENGINEERED MUTATION SEQADV 1H6R LEU B 68 UNP P42212 VAL 68 ENGINEERED MUTATION SEQADV 1H6R LEU C 68 UNP P42212 VAL 68 ENGINEERED MUTATION SEQADV 1H6R ALA A 72 UNP P42212 SER 72 ENGINEERED MUTATION SEQADV 1H6R ALA B 72 UNP P42212 SER 72 ENGINEERED MUTATION SEQADV 1H6R ALA C 72 UNP P42212 SER 72 ENGINEERED MUTATION SEQADV 1H6R ARG A 80 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 1H6R ARG B 80 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 1H6R ARG C 80 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 1H6R CYS A 149 UNP P42212 ASN 149 ENGINEERED MUTATION SEQADV 1H6R CYS B 149 UNP P42212 ASN 149 ENGINEERED MUTATION SEQADV 1H6R CYS C 149 UNP P42212 ASN 149 ENGINEERED MUTATION SEQADV 1H6R VAL A 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 1H6R VAL B 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 1H6R VAL C 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 1H6R CYS A 202 UNP P42212 SER 202 ENGINEERED MUTATION SEQADV 1H6R CYS B 202 UNP P42212 SER 202 ENGINEERED MUTATION SEQADV 1H6R CYS C 202 UNP P42212 SER 202 ENGINEERED MUTATION SEQADV 1H6R TYR A 203 UNP P42212 THR 203 ENGINEERED MUTATION SEQADV 1H6R TYR B 203 UNP P42212 THR 203 ENGINEERED MUTATION SEQADV 1H6R TYR C 203 UNP P42212 THR 203 ENGINEERED MUTATION SEQRES 1 A 236 MET SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 A 236 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 A 236 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 A 236 GLY LYS LEU THR LEU LYS PHE ILE VAL THR THR GLY LYS SEQRES 5 A 236 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE PIA SEQRES 6 A 236 LEU GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 A 236 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 A 236 GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR SEQRES 9 A 236 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 A 236 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 A 236 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 12 A 236 ASN SER HIS CYS VAL TYR ILE VAL ALA ASP LYS GLN LYS SEQRES 13 A 236 ASN GLY ILE LYS VAL ASN PHE LYS ILE ARG HIS ASN ILE SEQRES 14 A 236 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 15 A 236 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 16 A 236 ASN HIS TYR LEU CYS TYR GLN SER ALA LEU SER LYS ASP SEQRES 17 A 236 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 18 A 236 VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU SEQRES 19 A 236 TYR LYS SEQRES 1 B 236 MET SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 B 236 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 B 236 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 B 236 GLY LYS LEU THR LEU LYS PHE ILE VAL THR THR GLY LYS SEQRES 5 B 236 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE PIA SEQRES 6 B 236 LEU GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 B 236 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 B 236 GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR SEQRES 9 B 236 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 B 236 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 B 236 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 12 B 236 ASN SER HIS CYS VAL TYR ILE VAL ALA ASP LYS GLN LYS SEQRES 13 B 236 ASN GLY ILE LYS VAL ASN PHE LYS ILE ARG HIS ASN ILE SEQRES 14 B 236 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 15 B 236 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 16 B 236 ASN HIS TYR LEU CYS TYR GLN SER ALA LEU SER LYS ASP SEQRES 17 B 236 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 18 B 236 VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU SEQRES 19 B 236 TYR LYS SEQRES 1 C 236 MET SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 C 236 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 C 236 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 C 236 GLY LYS LEU THR LEU LYS PHE ILE VAL THR THR GLY LYS SEQRES 5 C 236 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE PIA SEQRES 6 C 236 LEU GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 C 236 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 C 236 GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR SEQRES 9 C 236 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 C 236 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 C 236 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 12 C 236 ASN SER HIS CYS VAL TYR ILE VAL ALA ASP LYS GLN LYS SEQRES 13 C 236 ASN GLY ILE LYS VAL ASN PHE LYS ILE ARG HIS ASN ILE SEQRES 14 C 236 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 15 C 236 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 16 C 236 ASN HIS TYR LEU CYS TYR GLN SER ALA LEU SER LYS ASP SEQRES 17 C 236 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 18 C 236 VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU SEQRES 19 C 236 TYR LYS MODRES 1H6R PIA A 66 ALA MODRES 1H6R PIA A 66 TYR MODRES 1H6R PIA A 66 GLY MODRES 1H6R PIA B 66 ALA MODRES 1H6R PIA B 66 TYR MODRES 1H6R PIA B 66 GLY MODRES 1H6R PIA C 66 ALA MODRES 1H6R PIA C 66 TYR MODRES 1H6R PIA C 66 GLY HET PIA A 66 20 HET PIA B 66 20 HET PIA C 66 20 HET CL A1232 1 HET CL B1232 1 HETNAM PIA [(4Z)-2-[(1S)-1-AMINOETHYL]-4-(4-HYDROXYBENZYLIDENE)-5- HETNAM 2 PIA OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID HETNAM CL CHLORIDE ION FORMUL 1 PIA 3(C14 H15 N3 O4) FORMUL 4 CL 2(CL 1-) FORMUL 6 HOH *840(H2 O) HELIX 1 1 LYS A 3 THR A 9 5 7 HELIX 2 2 PRO A 56 VAL A 61 5 6 HELIX 3 3 LEU A 68 ALA A 72 5 5 HELIX 4 4 MET A 78 HIS A 81 5 4 HELIX 5 5 ASP A 82 ALA A 87 1 6 HELIX 6 6 LYS A 156 ASN A 159 5 4 HELIX 7 7 LYS B 3 THR B 9 5 7 HELIX 8 8 PRO B 56 VAL B 61 5 6 HELIX 9 9 LEU B 68 ALA B 72 5 5 HELIX 10 10 MET B 78 HIS B 81 5 4 HELIX 11 11 ASP B 82 ALA B 87 1 6 HELIX 12 12 LYS B 156 ASN B 159 5 4 HELIX 13 13 LYS C 3 THR C 9 5 7 HELIX 14 14 PRO C 56 VAL C 61 5 6 HELIX 15 15 LEU C 68 ALA C 72 5 5 HELIX 16 16 PRO C 75 HIS C 81 5 7 HELIX 17 17 ASP C 82 ALA C 87 1 6 SHEET 1 AA12 VAL A 11 VAL A 22 0 SHEET 2 AA12 HIS A 25 ASP A 36 -1 O HIS A 25 N VAL A 22 SHEET 3 AA12 LYS A 41 VAL A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 AA12 HIS A 217 ALA A 227 -1 O MET A 218 N PHE A 46 SHEET 5 AA12 HIS A 199 SER A 208 -1 O TYR A 200 N ALA A 227 SHEET 6 AA12 HIS A 148 ASP A 155 -1 O HIS A 148 N TYR A 203 SHEET 7 AA12 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 AA12 VAL A 176 PRO A 187 -1 O GLN A 177 N HIS A 169 SHEET 9 AA12 TYR A 92 PHE A 100 -1 O VAL A 93 N THR A 186 SHEET 10 AA12 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 AA12 THR A 118 ILE A 128 -1 O THR A 118 N GLU A 115 SHEET 12 AA12 VAL A 11 VAL A 22 1 O PRO A 13 N LEU A 119 SHEET 1 BA12 VAL B 12 VAL B 22 0 SHEET 2 BA12 HIS B 25 ASP B 36 -1 O HIS B 25 N VAL B 22 SHEET 3 BA12 LYS B 41 GLY B 51 -1 O LYS B 41 N ASP B 36 SHEET 4 BA12 HIS B 217 ALA B 227 -1 O MET B 218 N PHE B 46 SHEET 5 BA12 HIS B 199 SER B 208 -1 O TYR B 200 N ALA B 227 SHEET 6 BA12 HIS B 148 ASP B 155 -1 O HIS B 148 N TYR B 203 SHEET 7 BA12 GLY B 160 ASN B 170 -1 O GLY B 160 N ASP B 155 SHEET 8 BA12 VAL B 176 PRO B 187 -1 O GLN B 177 N HIS B 169 SHEET 9 BA12 TYR B 92 PHE B 100 -1 O VAL B 93 N THR B 186 SHEET 10 BA12 ASN B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 BA12 THR B 118 ILE B 128 -1 O THR B 118 N GLU B 115 SHEET 12 BA12 VAL B 12 VAL B 22 1 O PRO B 13 N LEU B 119 SHEET 1 CA12 VAL C 12 VAL C 22 0 SHEET 2 CA12 HIS C 25 ASP C 36 -1 O HIS C 25 N VAL C 22 SHEET 3 CA12 LYS C 41 THR C 50 -1 O LYS C 41 N ASP C 36 SHEET 4 CA12 HIS C 217 ALA C 227 -1 O MET C 218 N PHE C 46 SHEET 5 CA12 HIS C 199 SER C 208 -1 O TYR C 200 N ALA C 227 SHEET 6 CA12 HIS C 148 ASP C 155 -1 O HIS C 148 N TYR C 203 SHEET 7 CA12 GLY C 160 ASN C 170 -1 O GLY C 160 N ASP C 155 SHEET 8 CA12 VAL C 176 PRO C 187 -1 O GLN C 177 N HIS C 169 SHEET 9 CA12 TYR C 92 PHE C 100 -1 O VAL C 93 N THR C 186 SHEET 10 CA12 ASN C 105 GLU C 115 -1 O TYR C 106 N ILE C 98 SHEET 11 CA12 THR C 118 ILE C 128 -1 O THR C 118 N GLU C 115 SHEET 12 CA12 VAL C 12 VAL C 22 1 O PRO C 13 N LEU C 119 SSBOND 1 CYS A 149 CYS A 202 1555 1555 2.03 SSBOND 2 CYS B 149 CYS B 202 1555 1555 2.04 SSBOND 3 CYS C 149 CYS C 202 1555 1555 2.04 LINK C PHE A 64 N1 PIA A 66 1555 1555 1.32 LINK C3 PIA A 66 N LEU A 68 1555 1555 1.34 LINK C PHE B 64 N1 PIA B 66 1555 1555 1.33 LINK C3 PIA B 66 N LEU B 68 1555 1555 1.33 LINK C PHE C 64 N1 PIA C 66 1555 1555 1.32 LINK C3 PIA C 66 N LEU C 68 1555 1555 1.34 CISPEP 1 MET A 88 PRO A 89 0 0.78 CISPEP 2 MET B 88 PRO B 89 0 1.17 CISPEP 3 MET C 88 PRO C 89 0 1.27 SITE 1 AC1 4 CYS A 202 GLN A 204 HOH A2296 ARG B 80 SITE 1 AC2 4 CYS B 202 GLN B 204 HOH B2254 ARG C 80 CRYST1 57.864 93.915 140.551 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007115 0.00000