data_1H88 # _entry.id 1H88 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1H88 pdb_00001h88 10.2210/pdb1h88/pdb PDBE EBI-5841 ? ? WWPDB D_1290005841 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-01-28 2 'Structure model' 1 1 2013-03-06 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 1 3 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' Other 6 2 'Structure model' 'Refinement description' 7 2 'Structure model' 'Source and taxonomy' 8 2 'Structure model' 'Structure summary' 9 2 'Structure model' 'Version format compliance' 10 3 'Structure model' 'Data collection' 11 3 'Structure model' 'Experimental preparation' 12 3 'Structure model' Other 13 3 'Structure model' 'Source and taxonomy' 14 4 'Structure model' 'Data collection' 15 4 'Structure model' 'Database references' 16 4 'Structure model' 'Derived calculations' 17 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_proc 3 3 'Structure model' pdbx_database_status 4 3 'Structure model' pdbx_entity_src_syn 5 3 'Structure model' pdbx_seq_map_depositor_info 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_database_status 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_exptl_crystal_grow.temp' 3 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 4 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_database_status.status_code_sf' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1H88 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2001-01-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tahirov, T.H.' 1 'Ogata, K.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter' 'Cell(Cambridge,Mass.)' 108 57 ? 2002 CELLB5 US 0092-8674 0998 ? 11792321 '10.1016/S0092-8674(01)00636-5' 1 ;Crystals of Ternary Protein-DNA Complexes Composed of DNA-Binding Domains C-Myb or V-Myb, C/Ebpalpha or C/Ebpbeta and Tom-1A Promoter Fragment ; 'Acta Crystallogr.,Sect.D' 57 1655 ? 2001 ABCRE6 DK 0907-4449 0766 ? 11679735 10.1107/S0907444901011982 2 'Crystal Structures of C-Myb DNA-Binding Domain in Free State: An Evidence for Binding of Na+ and Comparison with Solution Structure' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tahirov, T.H.' 1 ? primary 'Sato, K.' 2 ? primary 'Ichikawa-Iwata, E.' 3 ? primary 'Sasaki, M.' 4 ? primary 'Inoue-Bungo, T.' 5 ? primary 'Shiina, M.' 6 ? primary 'Kimura, K.' 7 ? primary 'Takata, S.' 8 ? primary 'Fujikawa, A.' 9 ? primary 'Morii, H.' 10 ? primary 'Kumasaka, T.' 11 ? primary 'Yamamoto, M.' 12 ? primary 'Ishii, S.' 13 ? primary 'Ogata, K.' 14 ? 1 'Tahirov, T.H.' 15 ? 1 'Inoue, T.' 16 ? 1 'Sasaki, M.' 17 ? 1 'Shiina, M.' 18 ? 1 'Kimura, K.' 19 ? 1 'Sato, K.' 20 ? 1 'Kumasaka, T.' 21 ? 1 'Yamamoto, M.' 22 ? 1 'Kamiya, N.' 23 ? 1 'Ogata, K.' 24 ? 2 'Tahirov, T.H.' 25 ? 2 'Morii, H.' 26 ? 2 'Uedaira, H.' 27 ? 2 'Sasaki, M.' 28 ? 2 'Sarai, A.' 29 ? 2 'Adachi, S.' 30 ? 2 'Park, S.Y.' 31 ? 2 'Kamiya, N.' 32 ? 2 'Ogata, K.' 33 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CCAAT/ENHANCER BINDING PROTEIN BETA' 9381.868 2 ? ? 'RESIDUES 259-336' 'BZIP DOMAIN' 2 polymer man 'MYB PROTO-ONCOGENE PROTEIN' 19173.074 1 ? YES 'RESIDUES 35-193' 'DNA BINDING DOMAIN' 3 polymer syn ;DNA(5'-(*GP*AP*TP*GP*TP*GP*GP*CP*GP*CP*AP* AP*TP*CP*CP*TP*TP*AP*AP*CP*GP*GP*AP*CP*TP*G)-3') ; 8028.177 1 ? ? 'FRAGMENT FROM TOM-1A PROMOTER' ? 4 polymer syn ;DNA(5'-(*CP*CP*AP*GP*TP*CP*CP*GP*TP*TP*AP* AP*GP*GP*AP*TP*TP*GP*CP*GP*CP*CP*AP*CP*AP*T)-3') ; 7948.129 1 ? ? 'FRAGMENT FROM TOM-1A PROMOTER' ? 5 non-polymer syn 'AMMONIUM ION' 18.038 1 ? ? ? ? 6 water nat water 18.015 25 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'C/EBP BETA, NFIL-6' 2 C-MYB # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE A,B ? 2 'polypeptide(L)' no no ;MGHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIKLVQKYGPKR WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV ; ;MGHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIKLVQKYGPKR WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV ; C ? 3 polydeoxyribonucleotide no no ;(DG)(DA)(DT)(DG)(DT)(DG)(DG)(DC)(DG)(DC)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DA)(DA)(DC) (DG)(DG)(DA)(DC)(DT)(DG) ; GATGTGGCGCAATCCTTAACGGACTG D ? 4 polydeoxyribonucleotide no no ;(DC)(DC)(DA)(DG)(DT)(DC)(DC)(DG)(DT)(DT)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DG)(DC)(DG) (DC)(DC)(DA)(DC)(DA)(DT) ; CCAGTCCGTTAAGGATTGCGCCACAT E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'AMMONIUM ION' NH4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 LYS n 1 3 SER n 1 4 LYS n 1 5 ALA n 1 6 LYS n 1 7 LYS n 1 8 THR n 1 9 VAL n 1 10 ASP n 1 11 LYS n 1 12 HIS n 1 13 SER n 1 14 ASP n 1 15 GLU n 1 16 TYR n 1 17 LYS n 1 18 ILE n 1 19 ARG n 1 20 ARG n 1 21 GLU n 1 22 ARG n 1 23 ASN n 1 24 ASN n 1 25 ILE n 1 26 ALA n 1 27 VAL n 1 28 ARG n 1 29 LYS n 1 30 SER n 1 31 ARG n 1 32 ASP n 1 33 LYS n 1 34 ALA n 1 35 LYS n 1 36 MET n 1 37 ARG n 1 38 ASN n 1 39 LEU n 1 40 GLU n 1 41 THR n 1 42 GLN n 1 43 HIS n 1 44 LYS n 1 45 VAL n 1 46 LEU n 1 47 GLU n 1 48 LEU n 1 49 THR n 1 50 ALA n 1 51 GLU n 1 52 ASN n 1 53 GLU n 1 54 ARG n 1 55 LEU n 1 56 GLN n 1 57 LYS n 1 58 LYS n 1 59 VAL n 1 60 GLU n 1 61 GLN n 1 62 LEU n 1 63 SER n 1 64 ARG n 1 65 GLU n 1 66 LEU n 1 67 SER n 1 68 THR n 1 69 LEU n 1 70 ARG n 1 71 ASN n 1 72 LEU n 1 73 PHE n 1 74 LYS n 1 75 GLN n 1 76 LEU n 1 77 PRO n 1 78 GLU n 2 1 MET n 2 2 GLY n 2 3 HIS n 2 4 LEU n 2 5 GLY n 2 6 LYS n 2 7 THR n 2 8 ARG n 2 9 TRP n 2 10 THR n 2 11 ARG n 2 12 GLU n 2 13 GLU n 2 14 ASP n 2 15 GLU n 2 16 LYS n 2 17 LEU n 2 18 LYS n 2 19 LYS n 2 20 LEU n 2 21 VAL n 2 22 GLU n 2 23 GLN n 2 24 ASN n 2 25 GLY n 2 26 THR n 2 27 ASP n 2 28 ASP n 2 29 TRP n 2 30 LYS n 2 31 VAL n 2 32 ILE n 2 33 ALA n 2 34 ASN n 2 35 TYR n 2 36 LEU n 2 37 PRO n 2 38 ASN n 2 39 ARG n 2 40 THR n 2 41 ASP n 2 42 VAL n 2 43 GLN n 2 44 CYS n 2 45 GLN n 2 46 HIS n 2 47 ARG n 2 48 TRP n 2 49 GLN n 2 50 LYS n 2 51 VAL n 2 52 LEU n 2 53 ASN n 2 54 PRO n 2 55 GLU n 2 56 LEU n 2 57 ILE n 2 58 LYS n 2 59 GLY n 2 60 PRO n 2 61 TRP n 2 62 THR n 2 63 LYS n 2 64 GLU n 2 65 GLU n 2 66 ASP n 2 67 GLN n 2 68 ARG n 2 69 VAL n 2 70 ILE n 2 71 LYS n 2 72 LEU n 2 73 VAL n 2 74 GLN n 2 75 LYS n 2 76 TYR n 2 77 GLY n 2 78 PRO n 2 79 LYS n 2 80 ARG n 2 81 TRP n 2 82 SER n 2 83 VAL n 2 84 ILE n 2 85 ALA n 2 86 LYS n 2 87 HIS n 2 88 LEU n 2 89 LYS n 2 90 GLY n 2 91 ARG n 2 92 ILE n 2 93 GLY n 2 94 LYS n 2 95 GLN n 2 96 CYS n 2 97 ARG n 2 98 GLU n 2 99 ARG n 2 100 TRP n 2 101 HIS n 2 102 ASN n 2 103 HIS n 2 104 LEU n 2 105 ASN n 2 106 PRO n 2 107 GLU n 2 108 VAL n 2 109 LYS n 2 110 LYS n 2 111 THR n 2 112 SER n 2 113 TRP n 2 114 THR n 2 115 GLU n 2 116 GLU n 2 117 GLU n 2 118 ASP n 2 119 ARG n 2 120 ILE n 2 121 ILE n 2 122 TYR n 2 123 GLN n 2 124 ALA n 2 125 HIS n 2 126 LYS n 2 127 ARG n 2 128 LEU n 2 129 GLY n 2 130 ASN n 2 131 ARG n 2 132 TRP n 2 133 ALA n 2 134 GLU n 2 135 ILE n 2 136 ALA n 2 137 LYS n 2 138 LEU n 2 139 LEU n 2 140 PRO n 2 141 GLY n 2 142 ARG n 2 143 THR n 2 144 ASP n 2 145 ASN n 2 146 ALA n 2 147 ILE n 2 148 LYS n 2 149 ASN n 2 150 HIS n 2 151 TRP n 2 152 ASN n 2 153 SER n 2 154 THR n 2 155 MET n 2 156 ARG n 2 157 ARG n 2 158 LYS n 2 159 VAL n 3 1 DG n 3 2 DA n 3 3 DT n 3 4 DG n 3 5 DT n 3 6 DG n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 3 11 DA n 3 12 DA n 3 13 DT n 3 14 DC n 3 15 DC n 3 16 DT n 3 17 DT n 3 18 DA n 3 19 DA n 3 20 DC n 3 21 DG n 3 22 DG n 3 23 DA n 3 24 DC n 3 25 DT n 3 26 DG n 4 1 DC n 4 2 DC n 4 3 DA n 4 4 DG n 4 5 DT n 4 6 DC n 4 7 DC n 4 8 DG n 4 9 DT n 4 10 DT n 4 11 DA n 4 12 DA n 4 13 DG n 4 14 DG n 4 15 DA n 4 16 DT n 4 17 DT n 4 18 DG n 4 19 DC n 4 20 DG n 4 21 DC n 4 22 DC n 4 23 DA n 4 24 DC n 4 25 DA n 4 26 DT n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? PAR2156 ? ? 2 1 sample ? ? ? 'HOUSE MOUSE' ? ? ? ? ? ? ? ? 'MUS MUSCULUS' 10090 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? PAR2156 ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample ? ? 'Homo sapiens' ? 9606 ? 4 1 sample ? ? 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 259 ? ? ? A . n A 1 2 LYS 2 260 ? ? ? A . n A 1 3 SER 3 261 ? ? ? A . n A 1 4 LYS 4 262 ? ? ? A . n A 1 5 ALA 5 263 ? ? ? A . n A 1 6 LYS 6 264 ? ? ? A . n A 1 7 LYS 7 265 ? ? ? A . n A 1 8 THR 8 266 ? ? ? A . n A 1 9 VAL 9 267 267 VAL VAL A . n A 1 10 ASP 10 268 268 ASP ASP A . n A 1 11 LYS 11 269 269 LYS LYS A . n A 1 12 HIS 12 270 270 HIS HIS A . n A 1 13 SER 13 271 271 SER SER A . n A 1 14 ASP 14 272 272 ASP ASP A . n A 1 15 GLU 15 273 273 GLU GLU A . n A 1 16 TYR 16 274 274 TYR TYR A . n A 1 17 LYS 17 275 275 LYS LYS A . n A 1 18 ILE 18 276 276 ILE ILE A . n A 1 19 ARG 19 277 277 ARG ARG A . n A 1 20 ARG 20 278 278 ARG ARG A . n A 1 21 GLU 21 279 279 GLU GLU A . n A 1 22 ARG 22 280 280 ARG ARG A . n A 1 23 ASN 23 281 281 ASN ASN A . n A 1 24 ASN 24 282 282 ASN ASN A . n A 1 25 ILE 25 283 283 ILE ILE A . n A 1 26 ALA 26 284 284 ALA ALA A . n A 1 27 VAL 27 285 285 VAL VAL A . n A 1 28 ARG 28 286 286 ARG ARG A . n A 1 29 LYS 29 287 287 LYS LYS A . n A 1 30 SER 30 288 288 SER SER A . n A 1 31 ARG 31 289 289 ARG ARG A . n A 1 32 ASP 32 290 290 ASP ASP A . n A 1 33 LYS 33 291 291 LYS LYS A . n A 1 34 ALA 34 292 292 ALA ALA A . n A 1 35 LYS 35 293 293 LYS LYS A . n A 1 36 MET 36 294 294 MET MET A . n A 1 37 ARG 37 295 295 ARG ARG A . n A 1 38 ASN 38 296 296 ASN ASN A . n A 1 39 LEU 39 297 297 LEU LEU A . n A 1 40 GLU 40 298 298 GLU GLU A . n A 1 41 THR 41 299 299 THR THR A . n A 1 42 GLN 42 300 300 GLN GLN A . n A 1 43 HIS 43 301 301 HIS HIS A . n A 1 44 LYS 44 302 302 LYS LYS A . n A 1 45 VAL 45 303 303 VAL VAL A . n A 1 46 LEU 46 304 304 LEU LEU A . n A 1 47 GLU 47 305 305 GLU GLU A . n A 1 48 LEU 48 306 306 LEU LEU A . n A 1 49 THR 49 307 307 THR THR A . n A 1 50 ALA 50 308 308 ALA ALA A . n A 1 51 GLU 51 309 309 GLU GLU A . n A 1 52 ASN 52 310 310 ASN ASN A . n A 1 53 GLU 53 311 311 GLU GLU A . n A 1 54 ARG 54 312 312 ARG ARG A . n A 1 55 LEU 55 313 313 LEU LEU A . n A 1 56 GLN 56 314 314 GLN GLN A . n A 1 57 LYS 57 315 315 LYS LYS A . n A 1 58 LYS 58 316 316 LYS LYS A . n A 1 59 VAL 59 317 317 VAL VAL A . n A 1 60 GLU 60 318 318 GLU GLU A . n A 1 61 GLN 61 319 319 GLN GLN A . n A 1 62 LEU 62 320 320 LEU LEU A . n A 1 63 SER 63 321 321 SER SER A . n A 1 64 ARG 64 322 322 ARG ARG A . n A 1 65 GLU 65 323 323 GLU GLU A . n A 1 66 LEU 66 324 324 LEU LEU A . n A 1 67 SER 67 325 325 SER SER A . n A 1 68 THR 68 326 326 THR THR A . n A 1 69 LEU 69 327 327 LEU LEU A . n A 1 70 ARG 70 328 328 ARG ARG A . n A 1 71 ASN 71 329 329 ASN ASN A . n A 1 72 LEU 72 330 330 LEU LEU A . n A 1 73 PHE 73 331 331 PHE PHE A . n A 1 74 LYS 74 332 332 LYS LYS A . n A 1 75 GLN 75 333 333 GLN GLN A . n A 1 76 LEU 76 334 334 LEU LEU A . n A 1 77 PRO 77 335 335 PRO PRO A . n A 1 78 GLU 78 336 336 GLU GLU A . n B 1 1 VAL 1 259 ? ? ? B . n B 1 2 LYS 2 260 ? ? ? B . n B 1 3 SER 3 261 ? ? ? B . n B 1 4 LYS 4 262 ? ? ? B . n B 1 5 ALA 5 263 ? ? ? B . n B 1 6 LYS 6 264 ? ? ? B . n B 1 7 LYS 7 265 ? ? ? B . n B 1 8 THR 8 266 266 THR THR B . n B 1 9 VAL 9 267 267 VAL VAL B . n B 1 10 ASP 10 268 268 ASP ASP B . n B 1 11 LYS 11 269 269 LYS LYS B . n B 1 12 HIS 12 270 270 HIS HIS B . n B 1 13 SER 13 271 271 SER SER B . n B 1 14 ASP 14 272 272 ASP ASP B . n B 1 15 GLU 15 273 273 GLU GLU B . n B 1 16 TYR 16 274 274 TYR TYR B . n B 1 17 LYS 17 275 275 LYS LYS B . n B 1 18 ILE 18 276 276 ILE ILE B . n B 1 19 ARG 19 277 277 ARG ARG B . n B 1 20 ARG 20 278 278 ARG ARG B . n B 1 21 GLU 21 279 279 GLU GLU B . n B 1 22 ARG 22 280 280 ARG ARG B . n B 1 23 ASN 23 281 281 ASN ASN B . n B 1 24 ASN 24 282 282 ASN ASN B . n B 1 25 ILE 25 283 283 ILE ILE B . n B 1 26 ALA 26 284 284 ALA ALA B . n B 1 27 VAL 27 285 285 VAL VAL B . n B 1 28 ARG 28 286 286 ARG ARG B . n B 1 29 LYS 29 287 287 LYS LYS B . n B 1 30 SER 30 288 288 SER SER B . n B 1 31 ARG 31 289 289 ARG ARG B . n B 1 32 ASP 32 290 290 ASP ASP B . n B 1 33 LYS 33 291 291 LYS LYS B . n B 1 34 ALA 34 292 292 ALA ALA B . n B 1 35 LYS 35 293 293 LYS LYS B . n B 1 36 MET 36 294 294 MET MET B . n B 1 37 ARG 37 295 295 ARG ARG B . n B 1 38 ASN 38 296 296 ASN ASN B . n B 1 39 LEU 39 297 297 LEU LEU B . n B 1 40 GLU 40 298 298 GLU GLU B . n B 1 41 THR 41 299 299 THR THR B . n B 1 42 GLN 42 300 300 GLN GLN B . n B 1 43 HIS 43 301 301 HIS HIS B . n B 1 44 LYS 44 302 302 LYS LYS B . n B 1 45 VAL 45 303 303 VAL VAL B . n B 1 46 LEU 46 304 304 LEU LEU B . n B 1 47 GLU 47 305 305 GLU GLU B . n B 1 48 LEU 48 306 306 LEU LEU B . n B 1 49 THR 49 307 307 THR THR B . n B 1 50 ALA 50 308 308 ALA ALA B . n B 1 51 GLU 51 309 309 GLU GLU B . n B 1 52 ASN 52 310 310 ASN ASN B . n B 1 53 GLU 53 311 311 GLU GLU B . n B 1 54 ARG 54 312 312 ARG ARG B . n B 1 55 LEU 55 313 313 LEU LEU B . n B 1 56 GLN 56 314 314 GLN GLN B . n B 1 57 LYS 57 315 315 LYS LYS B . n B 1 58 LYS 58 316 316 LYS LYS B . n B 1 59 VAL 59 317 317 VAL VAL B . n B 1 60 GLU 60 318 318 GLU GLU B . n B 1 61 GLN 61 319 319 GLN GLN B . n B 1 62 LEU 62 320 320 LEU LEU B . n B 1 63 SER 63 321 321 SER SER B . n B 1 64 ARG 64 322 322 ARG ARG B . n B 1 65 GLU 65 323 323 GLU GLU B . n B 1 66 LEU 66 324 324 LEU LEU B . n B 1 67 SER 67 325 325 SER SER B . n B 1 68 THR 68 326 326 THR THR B . n B 1 69 LEU 69 327 327 LEU LEU B . n B 1 70 ARG 70 328 328 ARG ARG B . n B 1 71 ASN 71 329 329 ASN ASN B . n B 1 72 LEU 72 330 330 LEU LEU B . n B 1 73 PHE 73 331 331 PHE PHE B . n B 1 74 LYS 74 332 332 LYS LYS B . n B 1 75 GLN 75 333 333 GLN GLN B . n B 1 76 LEU 76 334 334 LEU LEU B . n B 1 77 PRO 77 335 335 PRO PRO B . n B 1 78 GLU 78 336 336 GLU GLU B . n C 2 1 MET 1 35 ? ? ? C . n C 2 2 GLY 2 36 ? ? ? C . n C 2 3 HIS 3 37 ? ? ? C . n C 2 4 LEU 4 38 ? ? ? C . n C 2 5 GLY 5 39 39 GLY GLY C . n C 2 6 LYS 6 40 40 LYS LYS C . n C 2 7 THR 7 41 41 THR THR C . n C 2 8 ARG 8 42 42 ARG ARG C . n C 2 9 TRP 9 43 43 TRP TRP C . n C 2 10 THR 10 44 44 THR THR C . n C 2 11 ARG 11 45 45 ARG ARG C . n C 2 12 GLU 12 46 46 GLU GLU C . n C 2 13 GLU 13 47 47 GLU GLU C . n C 2 14 ASP 14 48 48 ASP ASP C . n C 2 15 GLU 15 49 49 GLU GLU C . n C 2 16 LYS 16 50 50 LYS LYS C . n C 2 17 LEU 17 51 51 LEU LEU C . n C 2 18 LYS 18 52 52 LYS LYS C . n C 2 19 LYS 19 53 53 LYS LYS C . n C 2 20 LEU 20 54 54 LEU LEU C . n C 2 21 VAL 21 55 55 VAL VAL C . n C 2 22 GLU 22 56 56 GLU GLU C . n C 2 23 GLN 23 57 57 GLN GLN C . n C 2 24 ASN 24 58 58 ASN ASN C . n C 2 25 GLY 25 59 59 GLY GLY C . n C 2 26 THR 26 60 60 THR THR C . n C 2 27 ASP 27 61 61 ASP ASP C . n C 2 28 ASP 28 62 62 ASP ASP C . n C 2 29 TRP 29 63 63 TRP TRP C . n C 2 30 LYS 30 64 64 LYS LYS C . n C 2 31 VAL 31 65 65 VAL VAL C . n C 2 32 ILE 32 66 66 ILE ILE C . n C 2 33 ALA 33 67 67 ALA ALA C . n C 2 34 ASN 34 68 68 ASN ASN C . n C 2 35 TYR 35 69 69 TYR TYR C . n C 2 36 LEU 36 70 70 LEU LEU C . n C 2 37 PRO 37 71 71 PRO PRO C . n C 2 38 ASN 38 72 72 ASN ASN C . n C 2 39 ARG 39 73 73 ARG ARG C . n C 2 40 THR 40 74 74 THR THR C . n C 2 41 ASP 41 75 75 ASP ASP C . n C 2 42 VAL 42 76 76 VAL VAL C . n C 2 43 GLN 43 77 77 GLN GLN C . n C 2 44 CYS 44 78 78 CYS CYS C . n C 2 45 GLN 45 79 79 GLN GLN C . n C 2 46 HIS 46 80 80 HIS HIS C . n C 2 47 ARG 47 81 81 ARG ARG C . n C 2 48 TRP 48 82 82 TRP TRP C . n C 2 49 GLN 49 83 83 GLN GLN C . n C 2 50 LYS 50 84 84 LYS LYS C . n C 2 51 VAL 51 85 85 VAL VAL C . n C 2 52 LEU 52 86 86 LEU LEU C . n C 2 53 ASN 53 87 87 ASN ASN C . n C 2 54 PRO 54 88 88 PRO PRO C . n C 2 55 GLU 55 89 89 GLU GLU C . n C 2 56 LEU 56 90 90 LEU LEU C . n C 2 57 ILE 57 91 91 ILE ILE C . n C 2 58 LYS 58 92 92 LYS LYS C . n C 2 59 GLY 59 93 93 GLY GLY C . n C 2 60 PRO 60 94 94 PRO PRO C . n C 2 61 TRP 61 95 95 TRP TRP C . n C 2 62 THR 62 96 96 THR THR C . n C 2 63 LYS 63 97 97 LYS LYS C . n C 2 64 GLU 64 98 98 GLU GLU C . n C 2 65 GLU 65 99 99 GLU GLU C . n C 2 66 ASP 66 100 100 ASP ASP C . n C 2 67 GLN 67 101 101 GLN GLN C . n C 2 68 ARG 68 102 102 ARG ARG C . n C 2 69 VAL 69 103 103 VAL VAL C . n C 2 70 ILE 70 104 104 ILE ILE C . n C 2 71 LYS 71 105 105 LYS LYS C . n C 2 72 LEU 72 106 106 LEU LEU C . n C 2 73 VAL 73 107 107 VAL VAL C . n C 2 74 GLN 74 108 108 GLN GLN C . n C 2 75 LYS 75 109 109 LYS LYS C . n C 2 76 TYR 76 110 110 TYR TYR C . n C 2 77 GLY 77 111 111 GLY GLY C . n C 2 78 PRO 78 112 112 PRO PRO C . n C 2 79 LYS 79 113 113 LYS LYS C . n C 2 80 ARG 80 114 114 ARG ARG C . n C 2 81 TRP 81 115 115 TRP TRP C . n C 2 82 SER 82 116 116 SER SER C . n C 2 83 VAL 83 117 117 VAL VAL C . n C 2 84 ILE 84 118 118 ILE ILE C . n C 2 85 ALA 85 119 119 ALA ALA C . n C 2 86 LYS 86 120 120 LYS LYS C . n C 2 87 HIS 87 121 121 HIS HIS C . n C 2 88 LEU 88 122 122 LEU LEU C . n C 2 89 LYS 89 123 123 LYS LYS C . n C 2 90 GLY 90 124 124 GLY GLY C . n C 2 91 ARG 91 125 125 ARG ARG C . n C 2 92 ILE 92 126 126 ILE ILE C . n C 2 93 GLY 93 127 127 GLY GLY C . n C 2 94 LYS 94 128 128 LYS LYS C . n C 2 95 GLN 95 129 129 GLN GLN C . n C 2 96 CYS 96 130 130 CYS CYS C . n C 2 97 ARG 97 131 131 ARG ARG C . n C 2 98 GLU 98 132 132 GLU GLU C . n C 2 99 ARG 99 133 133 ARG ARG C . n C 2 100 TRP 100 134 134 TRP TRP C . n C 2 101 HIS 101 135 135 HIS HIS C . n C 2 102 ASN 102 136 136 ASN ASN C . n C 2 103 HIS 103 137 137 HIS HIS C . n C 2 104 LEU 104 138 138 LEU LEU C . n C 2 105 ASN 105 139 139 ASN ASN C . n C 2 106 PRO 106 140 140 PRO PRO C . n C 2 107 GLU 107 141 141 GLU GLU C . n C 2 108 VAL 108 142 142 VAL VAL C . n C 2 109 LYS 109 143 143 LYS LYS C . n C 2 110 LYS 110 144 144 LYS LYS C . n C 2 111 THR 111 145 145 THR THR C . n C 2 112 SER 112 146 146 SER SER C . n C 2 113 TRP 113 147 147 TRP TRP C . n C 2 114 THR 114 148 148 THR THR C . n C 2 115 GLU 115 149 149 GLU GLU C . n C 2 116 GLU 116 150 150 GLU GLU C . n C 2 117 GLU 117 151 151 GLU GLU C . n C 2 118 ASP 118 152 152 ASP ASP C . n C 2 119 ARG 119 153 153 ARG ARG C . n C 2 120 ILE 120 154 154 ILE ILE C . n C 2 121 ILE 121 155 155 ILE ILE C . n C 2 122 TYR 122 156 156 TYR TYR C . n C 2 123 GLN 123 157 157 GLN GLN C . n C 2 124 ALA 124 158 158 ALA ALA C . n C 2 125 HIS 125 159 159 HIS HIS C . n C 2 126 LYS 126 160 160 LYS LYS C . n C 2 127 ARG 127 161 161 ARG ARG C . n C 2 128 LEU 128 162 162 LEU LEU C . n C 2 129 GLY 129 163 163 GLY GLY C . n C 2 130 ASN 130 164 164 ASN ASN C . n C 2 131 ARG 131 165 165 ARG ARG C . n C 2 132 TRP 132 166 166 TRP TRP C . n C 2 133 ALA 133 167 167 ALA ALA C . n C 2 134 GLU 134 168 168 GLU GLU C . n C 2 135 ILE 135 169 169 ILE ILE C . n C 2 136 ALA 136 170 170 ALA ALA C . n C 2 137 LYS 137 171 171 LYS LYS C . n C 2 138 LEU 138 172 172 LEU LEU C . n C 2 139 LEU 139 173 173 LEU LEU C . n C 2 140 PRO 140 174 174 PRO PRO C . n C 2 141 GLY 141 175 175 GLY GLY C . n C 2 142 ARG 142 176 176 ARG ARG C . n C 2 143 THR 143 177 177 THR THR C . n C 2 144 ASP 144 178 178 ASP ASP C . n C 2 145 ASN 145 179 179 ASN ASN C . n C 2 146 ALA 146 180 180 ALA ALA C . n C 2 147 ILE 147 181 181 ILE ILE C . n C 2 148 LYS 148 182 182 LYS LYS C . n C 2 149 ASN 149 183 183 ASN ASN C . n C 2 150 HIS 150 184 184 HIS HIS C . n C 2 151 TRP 151 185 185 TRP TRP C . n C 2 152 ASN 152 186 186 ASN ASN C . n C 2 153 SER 153 187 187 SER SER C . n C 2 154 THR 154 188 188 THR THR C . n C 2 155 MET 155 189 189 MET MET C . n C 2 156 ARG 156 190 190 ARG ARG C . n C 2 157 ARG 157 191 ? ? ? C . n C 2 158 LYS 158 192 ? ? ? C . n C 2 159 VAL 159 193 ? ? ? C . n D 3 1 DG 1 1 1 DG DG D . n D 3 2 DA 2 2 2 DA DA D . n D 3 3 DT 3 3 3 DT DT D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DT 5 5 5 DT DT D . n D 3 6 DG 6 6 6 DG DG D . n D 3 7 DG 7 7 7 DG DG D . n D 3 8 DC 8 8 8 DC DC D . n D 3 9 DG 9 9 9 DG DG D . n D 3 10 DC 10 10 10 DC DC D . n D 3 11 DA 11 11 11 DA DA D . n D 3 12 DA 12 12 12 DA DA D . n D 3 13 DT 13 13 13 DT DT D . n D 3 14 DC 14 14 14 DC DC D . n D 3 15 DC 15 15 15 DC DC D . n D 3 16 DT 16 16 16 DT DT D . n D 3 17 DT 17 17 17 DT DT D . n D 3 18 DA 18 18 18 DA DA D . n D 3 19 DA 19 19 19 DA DA D . n D 3 20 DC 20 20 20 DC DC D . n D 3 21 DG 21 21 21 DG DG D . n D 3 22 DG 22 22 22 DG DG D . n D 3 23 DA 23 23 23 DA DA D . n D 3 24 DC 24 24 24 DC DC D . n D 3 25 DT 25 25 25 DT DT D . n D 3 26 DG 26 26 26 DG DG D . n E 4 1 DC 1 1 1 DC DC E . n E 4 2 DC 2 2 2 DC DC E . n E 4 3 DA 3 3 3 DA DA E . n E 4 4 DG 4 4 4 DG DG E . n E 4 5 DT 5 5 5 DT DT E . n E 4 6 DC 6 6 6 DC DC E . n E 4 7 DC 7 7 7 DC DC E . n E 4 8 DG 8 8 8 DG DG E . n E 4 9 DT 9 9 9 DT DT E . n E 4 10 DT 10 10 10 DT DT E . n E 4 11 DA 11 11 11 DA DA E . n E 4 12 DA 12 12 12 DA DA E . n E 4 13 DG 13 13 13 DG DG E . n E 4 14 DG 14 14 14 DG DG E . n E 4 15 DA 15 15 15 DA DA E . n E 4 16 DT 16 16 16 DT DT E . n E 4 17 DT 17 17 17 DT DT E . n E 4 18 DG 18 18 18 DG DG E . n E 4 19 DC 19 19 19 DC DC E . n E 4 20 DG 20 20 20 DG DG E . n E 4 21 DC 21 21 21 DC DC E . n E 4 22 DC 22 22 22 DC DC E . n E 4 23 DA 23 23 23 DA DA E . n E 4 24 DC 24 24 24 DC DC E . n E 4 25 DA 25 25 25 DA DA E . n E 4 26 DT 26 26 26 DT DT E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 NH4 1 1191 1191 NH4 NH4 C . G 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 1 2001 2001 HOH HOH B . H 6 HOH 2 2002 2002 HOH HOH B . H 6 HOH 3 2003 2003 HOH HOH B . H 6 HOH 4 2004 2004 HOH HOH B . H 6 HOH 5 2005 2005 HOH HOH B . I 6 HOH 1 2001 2001 HOH HOH C . I 6 HOH 2 2002 2002 HOH HOH C . I 6 HOH 3 2003 2003 HOH HOH C . I 6 HOH 4 2004 2004 HOH HOH C . I 6 HOH 5 2005 2005 HOH HOH C . I 6 HOH 6 2006 2006 HOH HOH C . I 6 HOH 7 2007 2007 HOH HOH C . J 6 HOH 1 2001 2001 HOH HOH D . J 6 HOH 2 2002 2002 HOH HOH D . J 6 HOH 3 2003 2003 HOH HOH D . J 6 HOH 4 2004 2004 HOH HOH D . J 6 HOH 5 2005 2005 HOH HOH D . J 6 HOH 6 2006 2006 HOH HOH D . K 6 HOH 1 2001 2001 HOH HOH E . K 6 HOH 2 2002 2002 HOH HOH E . K 6 HOH 3 2003 2003 HOH HOH E . K 6 HOH 4 2004 2004 HOH HOH E . K 6 HOH 5 2005 2005 HOH HOH E . K 6 HOH 6 2006 2006 HOH HOH E . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B THR 266 ? OG1 ? B THR 8 OG1 2 1 Y 1 B THR 266 ? CG2 ? B THR 8 CG2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language CNS refinement 0.9 ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SCALEPACK 'data scaling' . ? 3 ? ? ? ? CNS phasing 0.9 ? 4 ? ? ? ? # _cell.entry_id 1H88 _cell.length_a 41.735 _cell.length_b 156.966 _cell.length_c 55.868 _cell.angle_alpha 90.00 _cell.angle_beta 100.16 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1H88 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1H88 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.34 _exptl_crystal.density_percent_sol 62.3 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.05 M AMMONIUM ACETATE, 0.01 M MAGNESIUM CHLORIDE, 10% V/V MPD, 6% V/V GLYCEROL, 0.05 M TRIS HCL BUFFER PH 7.5 AT 24 DEGREES C' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1999-02-25 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator DIAMOND _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_wavelength 0.97934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1H88 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 2.700 _reflns.number_obs 18605 _reflns.number_all ? _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.04600 _reflns.pdbx_netI_over_sigmaI 25.2564 _reflns.B_iso_Wilson_estimate 72.7 _reflns.pdbx_redundancy 3.151 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 87.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.23300 _reflns_shell.meanI_over_sigI_obs 2.109 _reflns_shell.pdbx_redundancy 2.20 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1H88 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16664 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1568847.92 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.87 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 96.1 _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.222 _refine.ls_R_factor_R_free 0.277 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 818 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 80.4 _refine.aniso_B[1][1] 36.22 _refine.aniso_B[2][2] -23.51 _refine.aniso_B[3][3] -12.71 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 15.66 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.269175 _refine.solvent_model_param_bsol 34.54 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;BULK SOLVENT MODEL USED. ATOMS C, O, N, CA AND CB ARE HARMONICALLY RESTRAINED DURING REFINEMENT WITH HARMONIC RESTRAINT CONSTANT OF 100 ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MAD AND MIR' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1H88 _refine_analyze.Luzzati_coordinate_error_obs 0.41 _refine_analyze.Luzzati_sigma_a_obs 0.54 _refine_analyze.Luzzati_d_res_low_obs 20.00 _refine_analyze.Luzzati_coordinate_error_free 0.52 _refine_analyze.Luzzati_sigma_a_free 0.58 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2490 _refine_hist.pdbx_number_atoms_nucleic_acid 1060 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 3576 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 19.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.13 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 5.91 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 8.80 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 10.10 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 13.64 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.97 _refine_ls_shell.number_reflns_R_work 2424 _refine_ls_shell.R_factor_R_work 0.412 _refine_ls_shell.percent_reflns_obs 88.2 _refine_ls_shell.R_factor_R_free 0.452 _refine_ls_shell.R_factor_R_free_error 0.044 _refine_ls_shell.percent_reflns_R_free 4.2 _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP # _database_PDB_matrix.entry_id 1H88 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1H88 _struct.title 'CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1H88 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'TRANSCRIPTION-DNA COMPLEX, TRANSCRIPTION REGULATION, BZIP, PROTO-ONCOGENE, MYB, C-MYB, C/EBP' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP CEBB_HUMAN 1 ? ? P17676 ? 2 UNP MYB_MOUSE 2 ? ? P06876 ? 3 PDB 1H88 3 ? ? 1H88 ? 4 PDB 1H88 4 ? ? 1H88 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1H88 A 1 ? 78 ? P17676 259 ? 336 ? 259 336 2 1 1H88 B 1 ? 78 ? P17676 259 ? 336 ? 259 336 3 2 1H88 C 1 ? 159 ? P06876 35 ? 193 ? 35 193 4 3 1H88 D 1 ? 26 ? 1H88 1 ? 26 ? 1 26 5 4 1H88 E 1 ? 26 ? 1H88 1 ? 26 ? 1 26 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 1H88 MET C 1 ? UNP P17676 LYS 35 'engineered mutation' 35 1 3 1H88 GLY C 2 ? UNP P17676 ARG 36 'engineered mutation' 36 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6360 ? 1 MORE -14.0 ? 1 'SSA (A^2)' 34030 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;OF C/EBP BETA AND MONOMER OF MYB PROTO- ONCOGENE PROTEINBOUND TO A DUPLEX DNA FRAGMENTFOR THE HETERO-ASSEMBLY DESCRIBED BY REMARK 350 THE ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? GLN A 75 ? SER A 271 GLN A 333 1 ? 63 HELX_P HELX_P2 2 SER B 13 ? GLN B 75 ? SER B 271 GLN B 333 1 ? 63 HELX_P HELX_P3 3 THR C 10 ? GLY C 25 ? THR C 44 GLY C 59 1 ? 16 HELX_P HELX_P4 4 ASP C 28 ? LEU C 36 ? ASP C 62 LEU C 70 1 ? 9 HELX_P HELX_P5 5 THR C 40 ? LYS C 50 ? THR C 74 LYS C 84 1 ? 11 HELX_P HELX_P6 6 THR C 62 ? GLY C 77 ? THR C 96 GLY C 111 1 ? 16 HELX_P HELX_P7 7 ARG C 80 ? LYS C 86 ? ARG C 114 LYS C 120 1 ? 7 HELX_P HELX_P8 8 ILE C 92 ? HIS C 103 ? ILE C 126 HIS C 137 1 ? 12 HELX_P HELX_P9 9 THR C 114 ? GLY C 129 ? THR C 148 GLY C 163 1 ? 16 HELX_P HELX_P10 10 ARG C 131 ? ALA C 136 ? ARG C 165 ALA C 170 1 ? 6 HELX_P HELX_P11 11 LYS C 137 ? LEU C 139 ? LYS C 171 LEU C 173 5 ? 3 HELX_P HELX_P12 12 THR C 143 ? THR C 154 ? THR C 177 THR C 188 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? D DA 2 N1 ? ? ? 1_555 E DT 26 N3 ? ? D DA 2 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D DA 2 N6 ? ? ? 1_555 E DT 26 O4 ? ? D DA 2 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DT 3 N3 ? ? ? 1_555 E DA 25 N1 ? ? D DT 3 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DT 3 O4 ? ? ? 1_555 E DA 25 N6 ? ? D DT 3 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 4 N1 ? ? ? 1_555 E DC 24 N3 ? ? D DG 4 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DG 4 N2 ? ? ? 1_555 E DC 24 O2 ? ? D DG 4 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DG 4 O6 ? ? ? 1_555 E DC 24 N4 ? ? D DG 4 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DT 5 N3 ? ? ? 1_555 E DA 23 N1 ? ? D DT 5 E DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DT 5 O4 ? ? ? 1_555 E DA 23 N6 ? ? D DT 5 E DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DG 6 N1 ? ? ? 1_555 E DC 22 N3 ? ? D DG 6 E DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DG 6 N2 ? ? ? 1_555 E DC 22 O2 ? ? D DG 6 E DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DG 6 O6 ? ? ? 1_555 E DC 22 N4 ? ? D DG 6 E DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DG 7 N1 ? ? ? 1_555 E DC 21 N3 ? ? D DG 7 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DG 7 N2 ? ? ? 1_555 E DC 21 O2 ? ? D DG 7 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D DG 7 O6 ? ? ? 1_555 E DC 21 N4 ? ? D DG 7 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DC 8 N3 ? ? ? 1_555 E DG 20 N1 ? ? D DC 8 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DC 8 N4 ? ? ? 1_555 E DG 20 O6 ? ? D DC 8 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DC 8 O2 ? ? ? 1_555 E DG 20 N2 ? ? D DC 8 E DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DG 9 N1 ? ? ? 1_555 E DC 19 N3 ? ? D DG 9 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DG 9 N2 ? ? ? 1_555 E DC 19 O2 ? ? D DG 9 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DG 9 O6 ? ? ? 1_555 E DC 19 N4 ? ? D DG 9 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DC 10 N3 ? ? ? 1_555 E DG 18 N1 ? ? D DC 10 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DC 10 N4 ? ? ? 1_555 E DG 18 O6 ? ? D DC 10 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DC 10 O2 ? ? ? 1_555 E DG 18 N2 ? ? D DC 10 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DA 11 N1 ? ? ? 1_555 E DT 17 N3 ? ? D DA 11 E DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DA 11 N6 ? ? ? 1_555 E DT 17 O4 ? ? D DA 11 E DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DA 12 N1 ? ? ? 1_555 E DT 16 N3 ? ? D DA 12 E DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D DA 12 N6 ? ? ? 1_555 E DT 16 O4 ? ? D DA 12 E DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D DT 13 N3 ? ? ? 1_555 E DA 15 N1 ? ? D DT 13 E DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D DT 13 O4 ? ? ? 1_555 E DA 15 N6 ? ? D DT 13 E DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D DC 14 N3 ? ? ? 1_555 E DG 14 N1 ? ? D DC 14 E DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D DC 14 N4 ? ? ? 1_555 E DG 14 O6 ? ? D DC 14 E DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D DC 14 O2 ? ? ? 1_555 E DG 14 N2 ? ? D DC 14 E DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D DC 15 N3 ? ? ? 1_555 E DG 13 N1 ? ? D DC 15 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D DC 15 N4 ? ? ? 1_555 E DG 13 O6 ? ? D DC 15 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? D DC 15 O2 ? ? ? 1_555 E DG 13 N2 ? ? D DC 15 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? D DT 16 N3 ? ? ? 1_555 E DA 12 N1 ? ? D DT 16 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? D DT 16 O4 ? ? ? 1_555 E DA 12 N6 ? ? D DT 16 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D DT 17 N3 ? ? ? 1_555 E DA 11 N1 ? ? D DT 17 E DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D DT 17 O4 ? ? ? 1_555 E DA 11 N6 ? ? D DT 17 E DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D DA 18 N1 ? ? ? 1_555 E DT 10 N3 ? ? D DA 18 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D DA 18 N6 ? ? ? 1_555 E DT 10 O4 ? ? D DA 18 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D DA 19 N1 ? ? ? 1_555 E DT 9 N3 ? ? D DA 19 E DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DA 19 N6 ? ? ? 1_555 E DT 9 O4 ? ? D DA 19 E DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D DC 20 N3 ? ? ? 1_555 E DG 8 N1 ? ? D DC 20 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D DC 20 N4 ? ? ? 1_555 E DG 8 O6 ? ? D DC 20 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DC 20 O2 ? ? ? 1_555 E DG 8 N2 ? ? D DC 20 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DG 21 N1 ? ? ? 1_555 E DC 7 N3 ? ? D DG 21 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D DG 21 N2 ? ? ? 1_555 E DC 7 O2 ? ? D DG 21 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D DG 21 O6 ? ? ? 1_555 E DC 7 N4 ? ? D DG 21 E DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DG 22 N1 ? ? ? 1_555 E DC 6 N3 ? ? D DG 22 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D DG 22 N2 ? ? ? 1_555 E DC 6 O2 ? ? D DG 22 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D DG 22 O6 ? ? ? 1_555 E DC 6 N4 ? ? D DG 22 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D DA 23 N1 ? ? ? 1_555 E DT 5 N3 ? ? D DA 23 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D DA 23 N6 ? ? ? 1_555 E DT 5 O4 ? ? D DA 23 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D DC 24 N3 ? ? ? 1_555 E DG 4 N1 ? ? D DC 24 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D DC 24 N4 ? ? ? 1_555 E DG 4 O6 ? ? D DC 24 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D DC 24 O2 ? ? ? 1_555 E DG 4 N2 ? ? D DC 24 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D DT 25 N3 ? ? ? 1_555 E DA 3 N1 ? ? D DT 25 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D DT 25 O4 ? ? ? 1_555 E DA 3 N6 ? ? D DT 25 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D DG 26 N1 ? ? ? 1_555 E DC 2 N3 ? ? D DG 26 E DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D DG 26 N2 ? ? ? 1_555 E DC 2 O2 ? ? D DG 26 E DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D DG 26 O6 ? ? ? 1_555 E DC 2 N4 ? ? D DG 26 E DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id NH4 _struct_site.pdbx_auth_seq_id 1191 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE NH4 C 1191' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ALA C 85 ? ALA C 119 . ? 1_555 ? 2 AC1 3 LEU C 88 ? LEU C 122 . ? 1_555 ? 3 AC1 3 ARG C 91 ? ARG C 125 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DT 3 ? ? "C1'" D DT 3 ? ? N1 D DT 3 ? ? 110.28 108.30 1.98 0.30 N 2 1 "O4'" D DA 19 ? ? "C1'" D DA 19 ? ? N9 D DA 19 ? ? 111.00 108.30 2.70 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 328 ? ? -37.23 -38.66 2 1 PRO A 335 ? ? -47.44 -76.41 3 1 SER B 271 ? ? -48.39 155.67 4 1 GLN B 333 ? ? -83.66 34.94 5 1 PRO B 335 ? ? -54.83 104.98 6 1 LYS C 40 ? ? -58.89 -70.70 7 1 PRO C 71 ? ? -57.46 174.08 8 1 VAL C 85 ? ? -148.29 -72.39 9 1 ASN C 87 ? ? -41.33 107.40 10 1 GLU C 141 ? ? -38.56 -39.57 11 1 THR C 145 ? ? -39.20 154.15 12 1 GLN C 157 ? ? -55.00 -71.89 13 1 ARG C 161 ? ? -77.74 -72.03 14 1 ASN C 164 ? ? -83.61 35.29 15 1 PRO C 174 ? ? -28.46 -41.24 16 1 THR C 188 ? ? -74.74 -73.04 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG D 1 ? ? 0.086 'SIDE CHAIN' 2 1 DA D 19 ? ? 0.052 'SIDE CHAIN' 3 1 DC E 1 ? ? 0.083 'SIDE CHAIN' # _pdbx_entry_details.entry_id 1H88 _pdbx_entry_details.compound_details ;CHAIN C ENGINEERED MUTATION LYS47MET, ARG48GLY C/EBP BETA IS IMPORTANT TRANSCRIPTIONAL ACTIVATOR IN THE REGULATION OF GENES INVOLVED IN IMMUNE AND INFLAMMATORY RESPONSES. SPECIFICALL ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 259 ? A VAL 1 2 1 Y 1 A LYS 260 ? A LYS 2 3 1 Y 1 A SER 261 ? A SER 3 4 1 Y 1 A LYS 262 ? A LYS 4 5 1 Y 1 A ALA 263 ? A ALA 5 6 1 Y 1 A LYS 264 ? A LYS 6 7 1 Y 1 A LYS 265 ? A LYS 7 8 1 Y 1 A THR 266 ? A THR 8 9 1 Y 1 B VAL 259 ? B VAL 1 10 1 Y 1 B LYS 260 ? B LYS 2 11 1 Y 1 B SER 261 ? B SER 3 12 1 Y 1 B LYS 262 ? B LYS 4 13 1 Y 1 B ALA 263 ? B ALA 5 14 1 Y 1 B LYS 264 ? B LYS 6 15 1 Y 1 B LYS 265 ? B LYS 7 16 1 Y 1 C MET 35 ? C MET 1 17 1 Y 1 C GLY 36 ? C GLY 2 18 1 Y 1 C HIS 37 ? C HIS 3 19 1 Y 1 C LEU 38 ? C LEU 4 20 1 Y 1 C ARG 191 ? C ARG 157 21 1 Y 1 C LYS 192 ? C LYS 158 22 1 Y 1 C VAL 193 ? C VAL 159 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 NH4 N N N N 393 NH4 HN1 H N N 394 NH4 HN2 H N N 395 NH4 HN3 H N N 396 NH4 HN4 H N N 397 PHE N N N N 398 PHE CA C N S 399 PHE C C N N 400 PHE O O N N 401 PHE CB C N N 402 PHE CG C Y N 403 PHE CD1 C Y N 404 PHE CD2 C Y N 405 PHE CE1 C Y N 406 PHE CE2 C Y N 407 PHE CZ C Y N 408 PHE OXT O N N 409 PHE H H N N 410 PHE H2 H N N 411 PHE HA H N N 412 PHE HB2 H N N 413 PHE HB3 H N N 414 PHE HD1 H N N 415 PHE HD2 H N N 416 PHE HE1 H N N 417 PHE HE2 H N N 418 PHE HZ H N N 419 PHE HXT H N N 420 PRO N N N N 421 PRO CA C N S 422 PRO C C N N 423 PRO O O N N 424 PRO CB C N N 425 PRO CG C N N 426 PRO CD C N N 427 PRO OXT O N N 428 PRO H H N N 429 PRO HA H N N 430 PRO HB2 H N N 431 PRO HB3 H N N 432 PRO HG2 H N N 433 PRO HG3 H N N 434 PRO HD2 H N N 435 PRO HD3 H N N 436 PRO HXT H N N 437 SER N N N N 438 SER CA C N S 439 SER C C N N 440 SER O O N N 441 SER CB C N N 442 SER OG O N N 443 SER OXT O N N 444 SER H H N N 445 SER H2 H N N 446 SER HA H N N 447 SER HB2 H N N 448 SER HB3 H N N 449 SER HG H N N 450 SER HXT H N N 451 THR N N N N 452 THR CA C N S 453 THR C C N N 454 THR O O N N 455 THR CB C N R 456 THR OG1 O N N 457 THR CG2 C N N 458 THR OXT O N N 459 THR H H N N 460 THR H2 H N N 461 THR HA H N N 462 THR HB H N N 463 THR HG1 H N N 464 THR HG21 H N N 465 THR HG22 H N N 466 THR HG23 H N N 467 THR HXT H N N 468 TRP N N N N 469 TRP CA C N S 470 TRP C C N N 471 TRP O O N N 472 TRP CB C N N 473 TRP CG C Y N 474 TRP CD1 C Y N 475 TRP CD2 C Y N 476 TRP NE1 N Y N 477 TRP CE2 C Y N 478 TRP CE3 C Y N 479 TRP CZ2 C Y N 480 TRP CZ3 C Y N 481 TRP CH2 C Y N 482 TRP OXT O N N 483 TRP H H N N 484 TRP H2 H N N 485 TRP HA H N N 486 TRP HB2 H N N 487 TRP HB3 H N N 488 TRP HD1 H N N 489 TRP HE1 H N N 490 TRP HE3 H N N 491 TRP HZ2 H N N 492 TRP HZ3 H N N 493 TRP HH2 H N N 494 TRP HXT H N N 495 TYR N N N N 496 TYR CA C N S 497 TYR C C N N 498 TYR O O N N 499 TYR CB C N N 500 TYR CG C Y N 501 TYR CD1 C Y N 502 TYR CD2 C Y N 503 TYR CE1 C Y N 504 TYR CE2 C Y N 505 TYR CZ C Y N 506 TYR OH O N N 507 TYR OXT O N N 508 TYR H H N N 509 TYR H2 H N N 510 TYR HA H N N 511 TYR HB2 H N N 512 TYR HB3 H N N 513 TYR HD1 H N N 514 TYR HD2 H N N 515 TYR HE1 H N N 516 TYR HE2 H N N 517 TYR HH H N N 518 TYR HXT H N N 519 VAL N N N N 520 VAL CA C N S 521 VAL C C N N 522 VAL O O N N 523 VAL CB C N N 524 VAL CG1 C N N 525 VAL CG2 C N N 526 VAL OXT O N N 527 VAL H H N N 528 VAL H2 H N N 529 VAL HA H N N 530 VAL HB H N N 531 VAL HG11 H N N 532 VAL HG12 H N N 533 VAL HG13 H N N 534 VAL HG21 H N N 535 VAL HG22 H N N 536 VAL HG23 H N N 537 VAL HXT H N N 538 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 NH4 N HN1 sing N N 386 NH4 N HN2 sing N N 387 NH4 N HN3 sing N N 388 NH4 N HN4 sing N N 389 PHE N CA sing N N 390 PHE N H sing N N 391 PHE N H2 sing N N 392 PHE CA C sing N N 393 PHE CA CB sing N N 394 PHE CA HA sing N N 395 PHE C O doub N N 396 PHE C OXT sing N N 397 PHE CB CG sing N N 398 PHE CB HB2 sing N N 399 PHE CB HB3 sing N N 400 PHE CG CD1 doub Y N 401 PHE CG CD2 sing Y N 402 PHE CD1 CE1 sing Y N 403 PHE CD1 HD1 sing N N 404 PHE CD2 CE2 doub Y N 405 PHE CD2 HD2 sing N N 406 PHE CE1 CZ doub Y N 407 PHE CE1 HE1 sing N N 408 PHE CE2 CZ sing Y N 409 PHE CE2 HE2 sing N N 410 PHE CZ HZ sing N N 411 PHE OXT HXT sing N N 412 PRO N CA sing N N 413 PRO N CD sing N N 414 PRO N H sing N N 415 PRO CA C sing N N 416 PRO CA CB sing N N 417 PRO CA HA sing N N 418 PRO C O doub N N 419 PRO C OXT sing N N 420 PRO CB CG sing N N 421 PRO CB HB2 sing N N 422 PRO CB HB3 sing N N 423 PRO CG CD sing N N 424 PRO CG HG2 sing N N 425 PRO CG HG3 sing N N 426 PRO CD HD2 sing N N 427 PRO CD HD3 sing N N 428 PRO OXT HXT sing N N 429 SER N CA sing N N 430 SER N H sing N N 431 SER N H2 sing N N 432 SER CA C sing N N 433 SER CA CB sing N N 434 SER CA HA sing N N 435 SER C O doub N N 436 SER C OXT sing N N 437 SER CB OG sing N N 438 SER CB HB2 sing N N 439 SER CB HB3 sing N N 440 SER OG HG sing N N 441 SER OXT HXT sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1H88 'double helix' 1H88 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DA 2 1_555 E DT 26 1_555 -0.082 -0.231 0.386 2.584 -7.948 2.140 1 D_DA2:DT26_E D 2 ? E 26 ? 20 1 1 D DT 3 1_555 E DA 25 1_555 -0.006 -0.157 0.204 -0.464 -9.126 0.217 2 D_DT3:DA25_E D 3 ? E 25 ? 20 1 1 D DG 4 1_555 E DC 24 1_555 -0.290 -0.250 -0.208 -14.001 -5.453 1.625 3 D_DG4:DC24_E D 4 ? E 24 ? 19 1 1 D DT 5 1_555 E DA 23 1_555 -0.054 -0.183 0.172 -8.662 -4.666 -3.396 4 D_DT5:DA23_E D 5 ? E 23 ? 20 1 1 D DG 6 1_555 E DC 22 1_555 -0.119 -0.122 -0.145 -6.401 -6.949 -0.767 5 D_DG6:DC22_E D 6 ? E 22 ? 19 1 1 D DG 7 1_555 E DC 21 1_555 -0.104 -0.031 0.109 -3.657 -3.107 -2.386 6 D_DG7:DC21_E D 7 ? E 21 ? 19 1 1 D DC 8 1_555 E DG 20 1_555 -0.130 -0.094 -0.322 0.584 2.713 -3.780 7 D_DC8:DG20_E D 8 ? E 20 ? 19 1 1 D DG 9 1_555 E DC 19 1_555 -0.064 -0.123 -0.168 1.371 -0.972 -4.062 8 D_DG9:DC19_E D 9 ? E 19 ? 19 1 1 D DC 10 1_555 E DG 18 1_555 0.000 -0.199 0.399 -4.699 -3.857 -5.706 9 D_DC10:DG18_E D 10 ? E 18 ? 19 1 1 D DA 11 1_555 E DT 17 1_555 0.208 -0.094 0.196 0.885 -8.578 -1.856 10 D_DA11:DT17_E D 11 ? E 17 ? 20 1 1 D DA 12 1_555 E DT 16 1_555 -0.064 -0.035 0.167 -0.508 -6.712 -5.048 11 D_DA12:DT16_E D 12 ? E 16 ? 20 1 1 D DT 13 1_555 E DA 15 1_555 -0.035 -0.111 0.182 4.375 -8.158 4.040 12 D_DT13:DA15_E D 13 ? E 15 ? 20 1 1 D DC 14 1_555 E DG 14 1_555 0.245 -0.192 -0.114 -3.166 -13.170 1.102 13 D_DC14:DG14_E D 14 ? E 14 ? 19 1 1 D DC 15 1_555 E DG 13 1_555 0.002 -0.134 -0.159 -12.674 -6.328 2.057 14 D_DC15:DG13_E D 15 ? E 13 ? 19 1 1 D DT 16 1_555 E DA 12 1_555 -0.188 0.018 0.022 -4.402 -9.616 -7.497 15 D_DT16:DA12_E D 16 ? E 12 ? 20 1 1 D DT 17 1_555 E DA 11 1_555 -0.048 -0.217 -0.663 6.176 -3.699 6.777 16 D_DT17:DA11_E D 17 ? E 11 ? 20 1 1 D DA 18 1_555 E DT 10 1_555 0.322 -0.203 0.170 5.564 -12.503 5.586 17 D_DA18:DT10_E D 18 ? E 10 ? 20 1 1 D DA 19 1_555 E DT 9 1_555 0.170 -0.045 0.181 8.917 1.202 -4.488 18 D_DA19:DT9_E D 19 ? E 9 ? 20 1 1 D DC 20 1_555 E DG 8 1_555 0.431 -0.273 0.482 -2.736 -7.715 -0.265 19 D_DC20:DG8_E D 20 ? E 8 ? 19 1 1 D DG 21 1_555 E DC 7 1_555 -0.283 -0.198 0.236 1.362 5.568 0.904 20 D_DG21:DC7_E D 21 ? E 7 ? 19 1 1 D DG 22 1_555 E DC 6 1_555 -0.107 -0.254 0.348 3.204 -2.742 1.647 21 D_DG22:DC6_E D 22 ? E 6 ? 19 1 1 D DA 23 1_555 E DT 5 1_555 0.113 -0.065 0.497 1.118 -3.089 -4.537 22 D_DA23:DT5_E D 23 ? E 5 ? 20 1 1 D DC 24 1_555 E DG 4 1_555 0.268 -0.121 0.338 -1.345 -8.201 0.763 23 D_DC24:DG4_E D 24 ? E 4 ? 19 1 1 D DT 25 1_555 E DA 3 1_555 -0.007 -0.069 0.370 -2.069 -11.010 -8.318 24 D_DT25:DA3_E D 25 ? E 3 ? 20 1 1 D DG 26 1_555 E DC 2 1_555 0.088 -0.375 0.307 7.943 -9.440 -3.529 25 D_DG26:DC2_E D 26 ? E 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DA 2 1_555 E DT 26 1_555 D DT 3 1_555 E DA 25 1_555 -0.109 -0.446 3.429 2.177 -1.847 32.710 -0.457 0.585 3.434 -3.271 -3.856 32.831 1 DD_DA2DT3:DA25DT26_EE D 2 ? E 26 ? D 3 ? E 25 ? 1 D DT 3 1_555 E DA 25 1_555 D DG 4 1_555 E DC 24 1_555 0.047 -0.709 3.564 1.165 0.457 42.807 -1.021 0.062 3.557 0.626 -1.596 42.825 2 DD_DT3DG4:DC24DA25_EE D 3 ? E 25 ? D 4 ? E 24 ? 1 D DG 4 1_555 E DC 24 1_555 D DT 5 1_555 E DA 23 1_555 -0.761 -0.761 3.137 -3.531 -1.435 31.554 -1.134 0.758 3.232 -2.627 6.464 31.778 3 DD_DG4DT5:DA23DC24_EE D 4 ? E 24 ? D 5 ? E 23 ? 1 D DT 5 1_555 E DA 23 1_555 D DG 6 1_555 E DC 22 1_555 0.219 0.518 3.377 0.752 2.657 36.014 0.446 -0.244 3.409 4.290 -1.214 36.116 4 DD_DT5DG6:DC22DA23_EE D 5 ? E 23 ? D 6 ? E 22 ? 1 D DG 6 1_555 E DC 22 1_555 D DG 7 1_555 E DC 21 1_555 -0.614 -1.017 3.214 -3.370 3.417 30.597 -2.548 0.515 3.132 6.426 6.337 30.963 5 DD_DG6DG7:DC21DC22_EE D 6 ? E 22 ? D 7 ? E 21 ? 1 D DG 7 1_555 E DC 21 1_555 D DC 8 1_555 E DG 20 1_555 0.756 -0.460 3.253 3.356 2.688 33.307 -1.236 -0.758 3.265 4.665 -5.824 33.576 6 DD_DG7DC8:DG20DC21_EE D 7 ? E 21 ? D 8 ? E 20 ? 1 D DC 8 1_555 E DG 20 1_555 D DG 9 1_555 E DC 19 1_555 -0.077 0.279 3.363 -0.167 11.466 31.837 -1.460 0.105 3.266 20.105 0.292 33.789 7 DD_DC8DG9:DC19DG20_EE D 8 ? E 20 ? D 9 ? E 19 ? 1 D DG 9 1_555 E DC 19 1_555 D DC 10 1_555 E DG 18 1_555 -0.089 -1.024 3.316 -4.065 5.600 35.421 -2.441 -0.427 3.114 9.098 6.603 36.070 8 DD_DG9DC10:DG18DC19_EE D 9 ? E 19 ? D 10 ? E 18 ? 1 D DC 10 1_555 E DG 18 1_555 D DA 11 1_555 E DT 17 1_555 0.676 0.317 3.223 6.172 4.273 32.025 -0.178 -0.126 3.306 7.614 -10.999 32.871 9 DD_DC10DA11:DT17DG18_EE D 10 ? E 18 ? D 11 ? E 17 ? 1 D DA 11 1_555 E DT 17 1_555 D DA 12 1_555 E DT 16 1_555 -0.872 -0.269 3.221 -4.343 3.617 34.609 -0.989 0.798 3.260 6.029 7.241 35.054 10 DD_DA11DA12:DT16DT17_EE D 11 ? E 17 ? D 12 ? E 16 ? 1 D DA 12 1_555 E DT 16 1_555 D DT 13 1_555 E DA 15 1_555 0.530 -1.309 3.219 -0.754 -0.538 32.520 -2.245 -1.076 3.227 -0.961 1.346 32.533 11 DD_DA12DT13:DA15DT16_EE D 12 ? E 16 ? D 13 ? E 15 ? 1 D DT 13 1_555 E DA 15 1_555 D DC 14 1_555 E DG 14 1_555 -0.140 -0.352 3.293 2.076 -2.055 41.031 -0.277 0.426 3.295 -2.927 -2.957 41.130 12 DD_DT13DC14:DG14DA15_EE D 13 ? E 15 ? D 14 ? E 14 ? 1 D DC 14 1_555 E DG 14 1_555 D DC 15 1_555 E DG 13 1_555 0.274 0.397 3.477 1.352 2.840 38.366 0.226 -0.237 3.503 4.312 -2.053 38.489 13 DD_DC14DC15:DG13DG14_EE D 14 ? E 14 ? D 15 ? E 13 ? 1 D DC 15 1_555 E DG 13 1_555 D DT 16 1_555 E DA 12 1_555 -1.079 -0.064 3.205 -2.150 0.597 30.778 -0.235 1.613 3.269 1.123 4.045 30.857 14 DD_DC15DT16:DA12DG13_EE D 15 ? E 13 ? D 16 ? E 12 ? 1 D DT 16 1_555 E DA 12 1_555 D DT 17 1_555 E DA 11 1_555 1.821 1.405 2.957 10.430 2.493 34.159 1.928 -1.459 3.439 4.120 -17.236 35.755 15 DD_DT16DT17:DA11DA12_EE D 16 ? E 12 ? D 17 ? E 11 ? 1 D DT 17 1_555 E DA 11 1_555 D DA 18 1_555 E DT 10 1_555 -0.523 1.895 3.435 -4.045 4.843 41.689 2.091 0.272 3.656 6.758 5.645 42.143 16 DD_DT17DA18:DT10DA11_EE D 17 ? E 11 ? D 18 ? E 10 ? 1 D DA 18 1_555 E DT 10 1_555 D DA 19 1_555 E DT 9 1_555 0.375 -0.386 3.172 0.708 1.188 28.794 -1.033 -0.601 3.162 2.387 -1.423 28.827 17 DD_DA18DA19:DT9DT10_EE D 18 ? E 10 ? D 19 ? E 9 ? 1 D DA 19 1_555 E DT 9 1_555 D DC 20 1_555 E DG 8 1_555 -0.499 -0.369 3.795 -4.140 -5.657 41.291 0.179 0.190 3.841 -7.953 5.820 41.856 18 DD_DA19DC20:DG8DT9_EE D 19 ? E 9 ? D 20 ? E 8 ? 1 D DC 20 1_555 E DG 8 1_555 D DG 21 1_555 E DC 7 1_555 0.529 0.397 3.084 2.830 1.615 35.646 0.424 -0.473 3.130 2.632 -4.612 35.790 19 DD_DC20DG21:DC7DG8_EE D 20 ? E 8 ? D 21 ? E 7 ? 1 D DG 21 1_555 E DC 7 1_555 D DG 22 1_555 E DC 6 1_555 -0.380 -0.500 3.351 -1.034 2.816 33.420 -1.337 0.486 3.309 4.885 1.793 33.551 20 DD_DG21DG22:DC6DC7_EE D 21 ? E 7 ? D 22 ? E 6 ? 1 D DG 22 1_555 E DC 6 1_555 D DA 23 1_555 E DT 5 1_555 -0.205 -0.822 3.213 -0.570 2.217 32.812 -1.822 0.268 3.155 3.919 1.008 32.889 21 DD_DG22DA23:DT5DC6_EE D 22 ? E 6 ? D 23 ? E 5 ? 1 D DA 23 1_555 E DT 5 1_555 D DC 24 1_555 E DG 4 1_555 0.003 -1.341 3.333 -0.024 3.787 31.240 -3.178 -0.010 3.153 7.000 0.044 31.463 22 DD_DA23DC24:DG4DT5_EE D 23 ? E 5 ? D 24 ? E 4 ? 1 D DC 24 1_555 E DG 4 1_555 D DT 25 1_555 E DA 3 1_555 -0.808 -0.853 3.334 -0.836 5.616 32.090 -2.500 1.295 3.163 10.060 1.498 32.575 23 DD_DC24DT25:DA3DG4_EE D 24 ? E 4 ? D 25 ? E 3 ? 1 D DT 25 1_555 E DA 3 1_555 D DG 26 1_555 E DC 2 1_555 0.205 0.003 3.078 -1.500 8.337 32.750 -1.263 -0.581 2.977 14.486 2.606 33.798 24 DD_DT25DG26:DC2DA3_EE D 25 ? E 3 ? D 26 ? E 2 ? # _atom_sites.entry_id 1H88 _atom_sites.fract_transf_matrix[1][1] 0.023961 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004294 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006371 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018184 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_