HEADER COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE) 02-SEP-94 1HCT TITLE NMR STRUCTURE OF THE HUMAN SRC SH2 DOMAIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-PYEEIE-OH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HUMAN SRC; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: PP60==C-SRC==; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 MOL_ID: 2; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 GENE: NUCLEOTIDE SEQUENCE A; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS HUMAN PP60C-SRC SH2 DOMAIN, COMPLEX (SIGNAL TRANSDUCTION-PEPTIDE) KEYWDS 2 COMPLEX EXPDTA SOLUTION NMR NUMMDL 23 AUTHOR R.T.GAMPE JUNIOR,R.X.XU REVDAT 5 30-OCT-24 1HCT 1 REMARK REVDAT 4 23-FEB-22 1HCT 1 REMARK LINK REVDAT 3 24-FEB-09 1HCT 1 VERSN REVDAT 2 01-APR-03 1HCT 1 JRNL REVDAT 1 15-SEP-95 1HCT 0 JRNL AUTH R.X.XU,J.M.WORD,D.G.DAVIS,M.J.RINK,D.H.WILLARD JR., JRNL AUTH 2 R.T.GAMPE JR. JRNL TITL SOLUTION STRUCTURE OF THE HUMAN PP60C-SRC SH2 DOMAIN JRNL TITL 2 COMPLEXED WITH A PHOSPHORYLATED TYROSINE PENTAPEPTIDE. JRNL REF BIOCHEMISTRY V. 34 2107 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7532003 JRNL DOI 10.1021/BI00007A003 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.GILMER,M.RODRIGUEZ,S.JORDAN,R.CROSBY,K.ALLIGOOD,M.GREEN, REMARK 1 AUTH 2 M.KIMERY,C.WAGNER,D.KINDER,P.CHARIFSON,A.M.HASSELL, REMARK 1 AUTH 3 D.WILLARD,M.LUTHER,D.RUSNAK,D.D.STERNBACH,M.MEHROTRA,M.PEEL, REMARK 1 AUTH 4 L.SHAMPINE,R.DAVIS,J.ROBBINS,I.R.PATEL,D.KASSEL,W.BURKHART, REMARK 1 AUTH 5 M.MOYER,T.BRADSHAW,J.BERMAN REMARK 1 TITL PEPTIDE INHIBITORS OF SRC SH3-SH2(SLASH)PHOSPHOPROTEIN REMARK 1 TITL 2 INTERACTIONS REMARK 1 REF J.BIOL.CHEM. V. 269 31711 1994 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.M.PASCAL,A.U.SINGER,G.GISH,T.YAMAZAKI,S.E.SHOELSON, REMARK 1 AUTH 2 T.PAWSON,L.E.KAY,J.D.FORMAN-KAY REMARK 1 TITL NUCLEAR MAGNETIC RESONANCE STRUCTURE OF AN SH2 DOMAIN OF REMARK 1 TITL 2 PHOSPHOLIPASE C-GAMMA1 COMPLEXED WITH A HIGH AFFINITY REMARK 1 TITL 3 BINDING PEPTIDE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 77 461 1994 REMARK 1 REFN ISSN 0092-8674 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.WAKSMAN,S.E.SHOELSON,N.PANT,D.COWBURN,J.KURIYAN REMARK 1 TITL BINDING OF A HIGH AFFINITY PHOSPHOTYROSYL PEPTIDE TO THE SRC REMARK 1 TITL 2 SH2 DOMAIN: CRYSTAL STRUCTURES OF THE COMPLEXED AND REMARK 1 TITL 3 PEPTIDE-FREE FORMS REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 72 779 1993 REMARK 1 REFN ISSN 0092-8674 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.J.ECK,S.E.SHOELSON,S.C.HARRISON REMARK 1 TITL RECOGNITION OF A HIGH-AFFINITY PHOSPHOTYROSYL PEPTIDE BY THE REMARK 1 TITL 2 SRC HOMOLOGY-2 DOMAIN OF P56LCK REMARK 1 REF NATURE V. 362 87 1993 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 5 REMARK 1 AUTH S.K.ANDERSON,C.P.GIBBS,A.TANAKA,H.J.KUNG,D.J.FUGITA REMARK 1 TITL HUMAN CELLULAR SRC GENE: NUCLEOTIDE SEQUENCE AND DERIVED REMARK 1 TITL 2 AMINO ACID SEQUENCE OF THE REGION CODING FOR THE REMARK 1 TITL 3 CARBOXY-TERMINAL TWO-THIRDS OF PP60C-SRC REMARK 1 REF MOL.CELL.BIOL. V. 5 1122 1985 REMARK 1 REFN ISSN 0270-7306 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HCT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173785. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 23 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA B 145 45.26 -170.32 REMARK 500 1 GLU B 166 32.87 -89.61 REMARK 500 1 LYS B 181 -165.99 -56.15 REMARK 500 1 ALA B 183 -150.73 -89.27 REMARK 500 1 LYS B 195 -40.64 -146.12 REMARK 500 1 ASN B 198 -169.34 -112.75 REMARK 500 1 TYR B 213 89.59 -179.30 REMARK 500 1 SER B 231 30.21 -89.69 REMARK 500 1 LYS B 232 -41.42 -150.23 REMARK 500 1 THR B 242 -37.68 -133.75 REMARK 500 2 GLU A 102 -176.82 -53.40 REMARK 500 2 ASP B 141 57.47 -149.62 REMARK 500 2 ARG B 169 98.67 -55.36 REMARK 500 2 ASN B 193 56.55 -101.61 REMARK 500 2 ALA B 194 -69.33 -150.08 REMARK 500 2 TYR B 213 137.09 -178.96 REMARK 500 2 THR B 215 -149.46 -134.67 REMARK 500 2 ARG B 217 -27.50 168.12 REMARK 500 2 HIS B 239 139.36 177.47 REMARK 500 2 THR B 242 -37.90 -135.95 REMARK 500 3 ASP B 141 48.18 -177.28 REMARK 500 3 LEU B 163 58.99 -103.09 REMARK 500 3 ALA B 183 -150.58 -89.88 REMARK 500 3 ASN B 193 49.78 -86.79 REMARK 500 3 ALA B 194 -49.18 -132.99 REMARK 500 3 LYS B 195 -67.36 -126.08 REMARK 500 3 TYR B 213 114.90 -178.11 REMARK 500 3 ARG B 217 -39.62 -147.32 REMARK 500 3 SER B 222 141.62 -177.41 REMARK 500 3 HIS B 239 126.78 179.10 REMARK 500 3 THR B 242 -39.24 -138.21 REMARK 500 4 ASP B 141 148.40 65.76 REMARK 500 4 SER B 142 155.16 170.97 REMARK 500 4 ALA B 145 44.18 -150.41 REMARK 500 4 ASN B 164 37.84 -140.15 REMARK 500 4 ALA B 165 30.96 37.12 REMARK 500 4 THR B 180 71.71 -106.68 REMARK 500 4 LYS B 195 -38.18 -137.06 REMARK 500 4 TYR B 213 135.16 -179.06 REMARK 500 4 ARG B 217 -39.83 -148.68 REMARK 500 4 HIS B 239 139.06 178.73 REMARK 500 5 ALA B 165 28.64 38.68 REMARK 500 5 GLU B 166 18.34 -152.80 REMARK 500 5 SER B 177 -81.92 -45.47 REMARK 500 5 GLU B 178 -45.63 83.68 REMARK 500 5 THR B 180 -164.07 -100.51 REMARK 500 5 ASN B 193 53.77 -90.27 REMARK 500 5 ALA B 194 -59.69 -154.63 REMARK 500 5 LYS B 195 -74.15 -97.91 REMARK 500 5 TYR B 213 120.17 -178.42 REMARK 500 REMARK 500 THIS ENTRY HAS 248 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG B 155 0.29 SIDE CHAIN REMARK 500 1 ARG B 156 0.32 SIDE CHAIN REMARK 500 1 ARG B 160 0.32 SIDE CHAIN REMARK 500 1 ARG B 169 0.20 SIDE CHAIN REMARK 500 1 ARG B 175 0.31 SIDE CHAIN REMARK 500 1 ARG B 205 0.32 SIDE CHAIN REMARK 500 1 ARG B 217 0.19 SIDE CHAIN REMARK 500 1 ARG B 240 0.27 SIDE CHAIN REMARK 500 2 ARG B 155 0.24 SIDE CHAIN REMARK 500 2 ARG B 156 0.31 SIDE CHAIN REMARK 500 2 ARG B 160 0.32 SIDE CHAIN REMARK 500 2 ARG B 169 0.22 SIDE CHAIN REMARK 500 2 ARG B 175 0.21 SIDE CHAIN REMARK 500 2 ARG B 205 0.31 SIDE CHAIN REMARK 500 2 ARG B 217 0.32 SIDE CHAIN REMARK 500 2 ARG B 240 0.27 SIDE CHAIN REMARK 500 3 ARG B 155 0.30 SIDE CHAIN REMARK 500 3 ARG B 156 0.30 SIDE CHAIN REMARK 500 3 ARG B 160 0.28 SIDE CHAIN REMARK 500 3 ARG B 169 0.30 SIDE CHAIN REMARK 500 3 ARG B 175 0.28 SIDE CHAIN REMARK 500 3 ARG B 205 0.24 SIDE CHAIN REMARK 500 3 ARG B 217 0.24 SIDE CHAIN REMARK 500 3 ARG B 240 0.31 SIDE CHAIN REMARK 500 4 ARG B 155 0.32 SIDE CHAIN REMARK 500 4 ARG B 156 0.31 SIDE CHAIN REMARK 500 4 ARG B 160 0.32 SIDE CHAIN REMARK 500 4 ARG B 169 0.32 SIDE CHAIN REMARK 500 4 ARG B 175 0.29 SIDE CHAIN REMARK 500 4 ARG B 205 0.32 SIDE CHAIN REMARK 500 4 ARG B 217 0.32 SIDE CHAIN REMARK 500 4 ARG B 240 0.31 SIDE CHAIN REMARK 500 5 ARG B 155 0.27 SIDE CHAIN REMARK 500 5 ARG B 156 0.32 SIDE CHAIN REMARK 500 5 ARG B 160 0.18 SIDE CHAIN REMARK 500 5 ARG B 169 0.31 SIDE CHAIN REMARK 500 5 ARG B 175 0.17 SIDE CHAIN REMARK 500 5 ARG B 205 0.14 SIDE CHAIN REMARK 500 5 ARG B 217 0.31 SIDE CHAIN REMARK 500 5 ARG B 240 0.32 SIDE CHAIN REMARK 500 6 ARG B 155 0.31 SIDE CHAIN REMARK 500 6 ARG B 156 0.18 SIDE CHAIN REMARK 500 6 ARG B 160 0.27 SIDE CHAIN REMARK 500 6 ARG B 169 0.29 SIDE CHAIN REMARK 500 6 ARG B 175 0.20 SIDE CHAIN REMARK 500 6 ARG B 205 0.12 SIDE CHAIN REMARK 500 6 ARG B 217 0.26 SIDE CHAIN REMARK 500 6 ARG B 240 0.24 SIDE CHAIN REMARK 500 7 ARG B 155 0.29 SIDE CHAIN REMARK 500 7 ARG B 156 0.32 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 183 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HCS RELATED DB: PDB DBREF 1HCT B 141 246 UNP P12931 SRC_HUMAN 143 248 DBREF 1HCT A 100 105 PDB 1HCT 1HCT 100 105 SEQRES 1 A 6 ACE PTR GLU GLU ILE GLU SEQRES 1 B 107 MET ASP SER ILE GLN ALA GLU GLU TRP TYR PHE GLY LYS SEQRES 2 B 107 ILE THR ARG ARG GLU SER GLU ARG LEU LEU LEU ASN ALA SEQRES 3 B 107 GLU ASN PRO ARG GLY THR PHE LEU VAL ARG GLU SER GLU SEQRES 4 B 107 THR THR LYS GLY ALA TYR CYS LEU SER VAL SER ASP PHE SEQRES 5 B 107 ASP ASN ALA LYS GLY LEU ASN VAL LYS HIS TYR LYS ILE SEQRES 6 B 107 ARG LYS LEU ASP SER GLY GLY PHE TYR ILE THR SER ARG SEQRES 7 B 107 THR GLN PHE ASN SER LEU GLN GLN LEU VAL ALA TYR TYR SEQRES 8 B 107 SER LYS HIS ALA ASP GLY LEU CYS HIS ARG LEU THR THR SEQRES 9 B 107 VAL CYS PRO MODRES 1HCT PTR A 101 TYR O-PHOSPHOTYROSINE HET ACE A 100 6 HET PTR A 101 24 HETNAM ACE ACETYL GROUP HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 ACE C2 H4 O FORMUL 1 PTR C9 H12 N O6 P HELIX 1 1 ILE B 143 ALA B 145 5 3 HELIX 2 2 ARG B 155 LEU B 162 1 8 HELIX 3 3 LEU B 223 TYR B 230 1 8 SHEET 1 A 3 PHE B 172 GLU B 176 0 SHEET 2 A 3 TYR B 184 PHE B 191 -1 N SER B 187 O LEU B 173 SHEET 3 A 3 LEU B 197 ILE B 204 -1 N ILE B 204 O TYR B 184 LINK C ACE A 100 N PTR A 101 1555 1555 1.31 LINK C PTR A 101 N GLU A 102 1555 1555 1.31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 HETATM 1 C ACE A 100 0.376 1.933 12.712 1.00 14.10 C HETATM 2 O ACE A 100 -0.506 2.761 12.603 1.00 14.64 O HETATM 3 CH3 ACE A 100 0.809 1.411 14.084 1.00 14.17 C HETATM 4 H1 ACE A 100 1.693 1.941 14.407 1.00 0.00 H HETATM 5 H2 ACE A 100 0.014 1.569 14.797 1.00 0.00 H HETATM 6 H3 ACE A 100 1.027 0.356 14.015 1.00 0.00 H HETATM 7 N PTR A 101 0.986 1.449 11.664 1.00 14.28 N HETATM 8 CA PTR A 101 0.612 1.916 10.300 1.00 13.54 C HETATM 9 C PTR A 101 0.496 3.442 10.288 1.00 14.12 C HETATM 10 O PTR A 101 0.858 4.111 11.235 1.00 13.97 O HETATM 11 CB PTR A 101 -0.726 1.294 9.910 1.00 13.83 C HETATM 12 CG PTR A 101 -0.512 -0.167 9.604 1.00 12.91 C HETATM 13 CD1 PTR A 101 -0.593 -1.119 10.633 1.00 12.70 C HETATM 14 CD2 PTR A 101 -0.231 -0.572 8.291 1.00 12.17 C HETATM 15 CE1 PTR A 101 -0.393 -2.481 10.347 1.00 11.44 C HETATM 16 CE2 PTR A 101 -0.032 -1.932 8.003 1.00 12.08 C HETATM 17 CZ PTR A 101 -0.113 -2.887 9.031 1.00 13.78 C HETATM 18 OH PTR A 101 0.089 -4.272 8.737 1.00 14.51 O HETATM 19 P PTR A 101 1.465 -5.005 9.136 1.00 17.94 P HETATM 20 O1P PTR A 101 2.475 -4.296 8.318 1.00 18.17 O HETATM 21 O2P PTR A 101 1.220 -6.412 8.746 1.00 15.88 O HETATM 22 O3P PTR A 101 1.562 -4.769 10.594 1.00 18.41 O HETATM 23 H PTR A 101 1.683 0.769 11.774 1.00 0.00 H HETATM 24 HA PTR A 101 1.367 1.607 9.591 1.00 0.00 H HETATM 25 HB2 PTR A 101 -1.424 1.396 10.728 1.00 0.00 H HETATM 26 HB3 PTR A 101 -1.116 1.792 9.035 1.00 0.00 H HETATM 27 HD1 PTR A 101 -0.805 -0.804 11.644 1.00 0.00 H HETATM 28 HD2 PTR A 101 -0.167 0.164 7.504 1.00 0.00 H HETATM 29 HE1 PTR A 101 -0.455 -3.214 11.137 1.00 0.00 H HETATM 30 HE2 PTR A 101 0.185 -2.244 6.992 1.00 0.00 H