data_1HDT # _entry.id 1HDT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1HDT pdb_00001hdt 10.2210/pdb1hdt/pdb WWPDB D_1000173801 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-10-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2024-06-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_database_status 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.process_site' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HDT _pdbx_database_status.recvd_initial_deposition_date 1994-07-25 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tabernero, L.' 1 'Sack, J.' 2 # _citation.id primary _citation.title 'Structure of a retro-binding peptide inhibitor complexed with human alpha-thrombin.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 246 _citation.page_first 14 _citation.page_last 20 _citation.year 1995 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7853394 _citation.pdbx_database_id_DOI 10.1006/jmbi.1994.0060 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tabernero, L.' 1 ? primary 'Chang, C.Y.' 2 ? primary 'Ohringer, S.L.' 3 ? primary 'Lau, W.F.' 4 ? primary 'Iwanowicz, E.J.' 5 ? primary 'Han, W.C.' 6 ? primary 'Wang, T.C.' 7 ? primary 'Seiler, S.M.' 8 ? primary 'Roberts, D.G.' 9 ? primary 'Sack, J.S.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat ALPHA-THROMBIN 3791.204 1 3.4.21.5 ? ? ? 2 polymer nat ALPHA-THROMBIN 29780.219 1 3.4.21.5 ? ? ? 3 polymer man 'HIRUGEN PEPTIDE' 1548.580 1 ? ? ? ? 4 non-polymer syn 'methyl N-(4-carbamimidamidobutanoyl)-L-phenylalanyl-L-allothreonyl-L-phenylalaninate' 554.638 1 ? ? ? ? 5 water nat water 18.015 95 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no SGEADCGLRPLFEKKSLEDKTERELLESYIDGR SGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'GDFEEIPEE(TYS)LQ' GDFEEIPEEYLQ P ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'methyl N-(4-carbamimidamidobutanoyl)-L-phenylalanyl-L-allothreonyl-L-phenylalaninate' 0E7 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 GLU n 1 4 ALA n 1 5 ASP n 1 6 CYS n 1 7 GLY n 1 8 LEU n 1 9 ARG n 1 10 PRO n 1 11 LEU n 1 12 PHE n 1 13 GLU n 1 14 LYS n 1 15 LYS n 1 16 SER n 1 17 LEU n 1 18 GLU n 1 19 ASP n 1 20 LYS n 1 21 THR n 1 22 GLU n 1 23 ARG n 1 24 GLU n 1 25 LEU n 1 26 LEU n 1 27 GLU n 1 28 SER n 1 29 TYR n 1 30 ILE n 1 31 ASP n 1 32 GLY n 1 33 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 GLY n 3 2 ASP n 3 3 PHE n 3 4 GLU n 3 5 GLU n 3 6 ILE n 3 7 PRO n 3 8 GLU n 3 9 GLU n 3 10 TYS n 3 11 LEU n 3 12 GLN n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Medicinal leech' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Hirudo medicinalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6421 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0E7 peptide-like . 'methyl N-(4-carbamimidamidobutanoyl)-L-phenylalanyl-L-allothreonyl-L-phenylalaninate' BMS-183507 'C28 H38 N6 O6' 554.638 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER L E n A 1 2 GLY 2 1 1 GLY GLY L D n A 1 3 GLU 3 1 1 GLU GLU L C n A 1 4 ALA 4 1 1 ALA ALA L B n A 1 5 ASP 5 1 1 ASP ASP L A n A 1 6 CYS 6 1 1 CYS CYS L . n A 1 7 GLY 7 2 2 GLY GLY L . n A 1 8 LEU 8 3 3 LEU LEU L . n A 1 9 ARG 9 4 4 ARG ARG L . n A 1 10 PRO 10 5 5 PRO PRO L . n A 1 11 LEU 11 6 6 LEU LEU L . n A 1 12 PHE 12 7 7 PHE PHE L . n A 1 13 GLU 13 8 8 GLU GLU L . n A 1 14 LYS 14 9 9 LYS LYS L . n A 1 15 LYS 15 10 10 LYS LYS L . n A 1 16 SER 16 11 11 SER SER L . n A 1 17 LEU 17 12 12 LEU LEU L . n A 1 18 GLU 18 13 13 GLU GLU L . n A 1 19 ASP 19 14 14 ASP ASP L . n A 1 20 LYS 20 14 14 LYS LYS L A n A 1 21 THR 21 14 14 THR THR L B n A 1 22 GLU 22 14 14 GLU GLU L C n A 1 23 ARG 23 14 14 ARG ARG L D n A 1 24 GLU 24 14 14 GLU GLU L E n A 1 25 LEU 25 14 14 LEU LEU L F n A 1 26 LEU 26 14 14 LEU LEU L G n A 1 27 GLU 27 14 14 GLU GLU L H n A 1 28 SER 28 14 14 SER SER L I n A 1 29 TYR 29 14 14 TYR TYR L J n A 1 30 ILE 30 14 14 ILE ILE L K n A 1 31 ASP 31 14 14 ASP ASP L L n A 1 32 GLY 32 14 14 GLY GLY L M n A 1 33 ARG 33 15 15 ARG ARG L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 148 TRP TRP H . n B 2 149 THR 149 149 149 THR THR H . n B 2 150 ALA 150 149 149 ALA ALA H A n B 2 151 ASN 151 149 149 ASN ASN H B n B 2 152 VAL 152 149 149 VAL VAL H C n B 2 153 GLY 153 149 149 GLY GLY H D n B 2 154 LYS 154 149 149 LYS LYS H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 247 GLU GLU H . n C 3 1 GLY 1 54 ? ? ? P . n C 3 2 ASP 2 55 55 ASP ASP P . n C 3 3 PHE 3 56 56 PHE PHE P . n C 3 4 GLU 4 57 57 GLU GLU P . n C 3 5 GLU 5 58 58 GLU GLU P . n C 3 6 ILE 6 59 59 ILE ILE P . n C 3 7 PRO 7 60 60 PRO PRO P . n C 3 8 GLU 8 61 61 GLU GLU P . n C 3 9 GLU 9 62 62 GLU GLU P . n C 3 10 TYS 10 63 63 TYS TYR P . n C 3 11 LEU 11 64 64 LEU LEU P . n C 3 12 GLN 12 65 65 GLN GLN P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 0E7 1 1 1 0E7 ALG H . E 5 HOH 1 649 649 HOH HOH L . E 5 HOH 2 650 650 HOH HOH L . E 5 HOH 3 657 657 HOH HOH L . E 5 HOH 4 658 658 HOH HOH L . E 5 HOH 5 683 683 HOH HOH L . E 5 HOH 6 685 685 HOH HOH L . E 5 HOH 7 693 693 HOH HOH L . F 5 HOH 1 601 601 HOH HOH H . F 5 HOH 2 602 602 HOH HOH H . F 5 HOH 3 603 603 HOH HOH H . F 5 HOH 4 605 605 HOH HOH H . F 5 HOH 5 606 606 HOH HOH H . F 5 HOH 6 607 607 HOH HOH H . F 5 HOH 7 608 608 HOH HOH H . F 5 HOH 8 609 609 HOH HOH H . F 5 HOH 9 611 611 HOH HOH H . F 5 HOH 10 612 612 HOH HOH H . F 5 HOH 11 614 614 HOH HOH H . F 5 HOH 12 615 615 HOH HOH H . F 5 HOH 13 616 616 HOH HOH H . F 5 HOH 14 617 617 HOH HOH H . F 5 HOH 15 619 619 HOH HOH H . F 5 HOH 16 620 620 HOH HOH H . F 5 HOH 17 621 621 HOH HOH H . F 5 HOH 18 622 622 HOH HOH H . F 5 HOH 19 623 623 HOH HOH H . F 5 HOH 20 624 624 HOH HOH H . F 5 HOH 21 625 625 HOH HOH H . F 5 HOH 22 627 627 HOH HOH H . F 5 HOH 23 628 628 HOH HOH H . F 5 HOH 24 630 630 HOH HOH H . F 5 HOH 25 631 631 HOH HOH H . F 5 HOH 26 633 633 HOH HOH H . F 5 HOH 27 635 635 HOH HOH H . F 5 HOH 28 636 636 HOH HOH H . F 5 HOH 29 637 637 HOH HOH H . F 5 HOH 30 638 638 HOH HOH H . F 5 HOH 31 639 639 HOH HOH H . F 5 HOH 32 640 640 HOH HOH H . F 5 HOH 33 641 641 HOH HOH H . F 5 HOH 34 642 642 HOH HOH H . F 5 HOH 35 644 644 HOH HOH H . F 5 HOH 36 645 645 HOH HOH H . F 5 HOH 37 646 646 HOH HOH H . F 5 HOH 38 647 647 HOH HOH H . F 5 HOH 39 648 648 HOH HOH H . F 5 HOH 40 651 651 HOH HOH H . F 5 HOH 41 653 653 HOH HOH H . F 5 HOH 42 654 654 HOH HOH H . F 5 HOH 43 655 655 HOH HOH H . F 5 HOH 44 656 656 HOH HOH H . F 5 HOH 45 659 659 HOH HOH H . F 5 HOH 46 664 664 HOH HOH H . F 5 HOH 47 665 665 HOH HOH H . F 5 HOH 48 667 667 HOH HOH H . F 5 HOH 49 668 668 HOH HOH H . F 5 HOH 50 669 669 HOH HOH H . F 5 HOH 51 670 670 HOH HOH H . F 5 HOH 52 673 673 HOH HOH H . F 5 HOH 53 674 674 HOH HOH H . F 5 HOH 54 675 675 HOH HOH H . F 5 HOH 55 676 676 HOH HOH H . F 5 HOH 56 677 677 HOH HOH H . F 5 HOH 57 680 680 HOH HOH H . F 5 HOH 58 681 681 HOH HOH H . F 5 HOH 59 682 682 HOH HOH H . F 5 HOH 60 684 684 HOH HOH H . F 5 HOH 61 686 686 HOH HOH H . F 5 HOH 62 689 689 HOH HOH H . F 5 HOH 63 690 690 HOH HOH H . F 5 HOH 64 692 692 HOH HOH H . F 5 HOH 65 695 695 HOH HOH H . F 5 HOH 66 697 697 HOH HOH H . F 5 HOH 67 698 698 HOH HOH H . F 5 HOH 68 700 700 HOH HOH H . F 5 HOH 69 701 701 HOH HOH H . F 5 HOH 70 702 702 HOH HOH H . F 5 HOH 71 703 703 HOH HOH H . F 5 HOH 72 704 704 HOH HOH H . F 5 HOH 73 705 705 HOH HOH H . F 5 HOH 74 706 706 HOH HOH H . F 5 HOH 75 707 707 HOH HOH H . F 5 HOH 76 709 709 HOH HOH H . F 5 HOH 77 710 710 HOH HOH H . F 5 HOH 78 711 711 HOH HOH H . F 5 HOH 79 712 712 HOH HOH H . F 5 HOH 80 713 713 HOH HOH H . G 5 HOH 1 626 626 HOH HOH P . G 5 HOH 2 634 634 HOH HOH P . G 5 HOH 3 660 660 HOH HOH P . G 5 HOH 4 662 662 HOH HOH P . G 5 HOH 5 672 672 HOH HOH P . G 5 HOH 6 678 678 HOH HOH P . G 5 HOH 7 679 679 HOH HOH P . G 5 HOH 8 688 688 HOH HOH P . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1HDT _cell.length_a 108.970 _cell.length_b 80.920 _cell.length_c 46.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1HDT _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1HDT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_percent_sol 56.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1HDT _refine.ls_number_reflns_obs 9916 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2462 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 2597 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.03 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1HDT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1HDT _struct.title 'STRUCTURE OF A RETRO-BINDING PEPTIDE INHIBITOR COMPLEXED WITH HUMAN ALPHA-THROMBIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HDT _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'SERINE PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN 1 P00734 1 ;MAHVRGLQLPGCLALAALCSLVHSQHVFLAPQQARSLLQRVRRANTFLEEVRKGNLERECVEETCSYEEAFEALESSTAT DVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRYPHKPEINSTTHPGADLQENFCRNP DSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMTPRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASA QAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGRTATSEY QTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRW VLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKR GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; ? 2 UNP THRB_HUMAN 2 P00734 1 ;MAHVRGLQLPGCLALAALCSLVHSQHVFLAPQQARSLLQRVRRANTFLEEVRKGNLERECVEETCSYEEAFEALESSTAT DVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRYPHKPEINSTTHPGADLQENFCRNP DSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMTPRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASA QAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGRTATSEY QTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRW VLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKR GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; ? 3 UNP HIR3A_HIRME 3 P28507 1 GDFEEIPEEYLQ ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1HDT L 6 ? 33 ? P00734 331 ? 363 ? 1 15 2 2 1HDT H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 1HDT P 1 ? 12 ? P28507 54 ? 65 ? 54 65 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5130 ? 1 MORE -25 ? 1 'SSA (A^2)' 13680 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 THR A 21 B TYR A 29 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P2 H4 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P3 H5 GLU B 169 ? THR B 177 ? GLU H 164 THR H 172 1 ? 9 HELX_P HELX_P4 H7 LEU B 246 ? ASP B 255 ? LEU H 234 ASP H 243 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.030 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details B1 ? 7 ? B2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense B1 1 2 ? anti-parallel B1 2 3 ? parallel B1 3 4 ? anti-parallel B1 4 5 ? parallel B1 5 6 ? anti-parallel B1 6 7 ? anti-parallel B2 1 2 ? anti-parallel B2 2 3 ? parallel B2 3 4 ? anti-parallel B2 4 5 ? parallel B2 5 6 ? anti-parallel B2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id B1 1 TRP B 14 ? LYS B 21 ? TRP H 29 LYS H 36 B1 2 GLU B 25 ? ILE B 33 ? GLU H 39 ILE H 47 B1 3 ARG B 36 ? THR B 40 ? ARG H 50 THR H 54 B1 4 ILE B 100 ? LYS B 106 ? ILE H 103 LYS H 109 B1 5 LYS B 77 ? HIS B 87 ? LYS H 81 HIS H 91 B1 6 ASP B 58 ? GLY B 64 ? ASP H 63 GLY H 69 B1 7 GLN B 15 ? LYS B 21 ? GLN H 30 LYS H 36 B2 1 TYR B 134 ? GLY B 140 ? TYR H 134 GLY H 140 B2 2 LEU B 160 ? ILE B 167 ? LEU H 155 ILE H 162 B2 3 ASN B 184 ? GLY B 189 ? ASN H 179 GLY H 184 B2 4 GLY B 238 ? VAL B 243 ? GLY H 226 VAL H 231 B2 5 ASN B 217 ? TRP B 227 ? ASN H 205 TRP H 215 B2 6 GLY B 207 ? SER B 213 ? GLY H 197 SER H 203 B2 7 TYR B 134 ? GLY B 140 ? TYR H 134 GLY H 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id B1 1 2 O TRP B 14 ? O TRP H 29 N LEU B 32 ? N LEU H 46 B1 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B1 3 4 O VAL B 38 ? O VAL H 52 N MET B 103 ? N MET H 106 B1 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 B1 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 B1 6 7 O ARG B 62 ? O ARG H 67 N MET B 17 ? N MET H 32 B2 1 2 O TYR B 134 ? O TYR H 134 N ILE B 167 ? N ILE H 162 B2 2 3 O PRO B 166 ? O PRO H 161 N GLY B 189 ? N GLY H 184 B2 3 4 O ASN B 184 ? O ASN H 179 N HIS B 242 ? N HIS H 230 B2 4 5 O THR B 241 ? O THR H 229 N ILE B 224 ? N ILE H 212 B2 5 6 N ASN B 217 ? N ASN H 205 O SER B 213 ? O SER H 203 B2 6 7 O VAL B 210 ? O VAL H 200 N ARG B 137 ? N ARG H 137 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software H 0E7 1 ? 15 'BINDING SITE FOR RESIDUE 0E7 H 1' AC2 Software ? ? ? ? 19 'BINDING SITE FOR CHAIN P OF HIRUGEN PEPTIDE' ACT Author ? ? ? ? 4 'ACTIVE SITE' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 HIS B 43 ? HIS H 57 . ? 1_555 ? 2 AC1 15 TYR B 47 A TYR H 60 . ? 1_555 ? 3 AC1 15 TRP B 50 D TRP H 60 . ? 1_555 ? 4 AC1 15 TRP B 148 ? TRP H 148 . ? 2_565 ? 5 AC1 15 ASP B 199 ? ASP H 189 . ? 1_555 ? 6 AC1 15 ALA B 200 ? ALA H 190 . ? 1_555 ? 7 AC1 15 CYS B 201 ? CYS H 191 . ? 1_555 ? 8 AC1 15 GLU B 202 ? GLU H 192 . ? 1_555 ? 9 AC1 15 SER B 205 ? SER H 195 . ? 1_555 ? 10 AC1 15 VAL B 225 ? VAL H 213 . ? 1_555 ? 11 AC1 15 SER B 226 ? SER H 214 . ? 1_555 ? 12 AC1 15 TRP B 227 ? TRP H 215 . ? 1_555 ? 13 AC1 15 GLY B 228 ? GLY H 216 . ? 1_555 ? 14 AC1 15 GLU B 229 ? GLU H 217 . ? 1_555 ? 15 AC1 15 GLY B 230 ? GLY H 219 . ? 1_555 ? 16 AC2 19 PHE B 19 ? PHE H 34 . ? 1_555 ? 17 AC2 19 LEU B 60 ? LEU H 65 . ? 1_555 ? 18 AC2 19 ARG B 62 ? ARG H 67 . ? 1_555 ? 19 AC2 19 ARG B 68 ? ARG H 73 . ? 1_555 ? 20 AC2 19 THR B 69 ? THR H 74 . ? 1_555 ? 21 AC2 19 TYR B 71 ? TYR H 76 . ? 1_555 ? 22 AC2 19 LYS B 77 ? LYS H 81 . ? 1_555 ? 23 AC2 19 ILE B 78 ? ILE H 82 . ? 1_555 ? 24 AC2 19 MET B 80 ? MET H 84 . ? 1_555 ? 25 AC2 19 PRO B 88 ? PRO H 92 . ? 3_555 ? 26 AC2 19 ARG B 89 ? ARG H 93 . ? 3_555 ? 27 AC2 19 GLU B 94 A GLU H 97 . ? 3_555 ? 28 AC2 19 ASN B 95 ? ASN H 98 . ? 3_555 ? 29 AC2 19 ASP B 97 ? ASP H 100 . ? 3_555 ? 30 AC2 19 ARG B 180 ? ARG H 175 . ? 3_555 ? 31 AC2 19 HOH G . ? HOH P 626 . ? 1_555 ? 32 AC2 19 HOH G . ? HOH P 634 . ? 1_555 ? 33 AC2 19 HOH G . ? HOH P 660 . ? 1_555 ? 34 AC2 19 HOH G . ? HOH P 688 . ? 1_555 ? 35 ACT 4 ASP B 199 ? ASP H 189 . ? 1_555 ? 36 ACT 4 SER B 205 ? SER H 195 . ? 1_555 ? 37 ACT 4 GLY B 228 ? GLY H 216 . ? 1_555 ? 38 ACT 4 GLY B 230 ? GLY H 219 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA H CYS 42 ? ? CB H CYS 42 ? ? SG H CYS 42 ? ? 123.99 114.20 9.79 1.10 N 2 1 CA H CYS 182 ? ? CB H CYS 182 ? ? SG H CYS 182 ? ? 122.77 114.20 8.57 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU L 1 C ? -128.44 -51.54 2 1 ALA L 1 B ? 59.73 -46.78 3 1 PHE L 7 ? ? -149.51 -85.34 4 1 LYS L 14 A ? -42.86 -17.44 5 1 ARG L 14 D ? -49.86 -16.23 6 1 LEU L 14 G ? -49.78 -12.96 7 1 TYR L 14 J ? -68.90 67.45 8 1 ILE L 14 K ? 65.04 -56.14 9 1 GLU H 18 ? ? 39.82 48.13 10 1 ALA H 22 ? ? -67.33 -152.79 11 1 SER H 27 ? ? -156.67 72.93 12 1 PRO H 28 ? ? -67.11 9.32 13 1 CYS H 42 ? ? -170.66 -171.17 14 1 ALA H 44 ? ? 179.10 -170.56 15 1 TYR H 60 A ? -160.94 70.03 16 1 ASN H 60 G ? -163.36 59.78 17 1 ASN H 62 ? ? -79.72 49.89 18 1 ASP H 63 ? ? -154.28 2.00 19 1 LYS H 70 ? ? -65.92 -177.93 20 1 HIS H 71 ? ? -176.55 -30.32 21 1 ARG H 75 ? ? -57.73 -174.06 22 1 GLU H 77 ? ? -48.90 80.29 23 1 ILE H 79 ? ? -121.12 -75.49 24 1 GLU H 97 A ? -137.22 -31.12 25 1 ASN H 98 ? ? -158.50 18.39 26 1 ASP H 116 ? ? -55.98 -4.64 27 1 LEU H 130 ? ? -69.36 79.62 28 1 ASN H 143 ? ? -35.10 147.50 29 1 THR H 147 ? ? -42.17 106.92 30 1 PRO H 152 ? ? -37.87 145.47 31 1 LYS H 186 D ? -54.49 -165.54 32 1 ASP H 189 ? ? 178.09 175.18 33 1 ASN H 204 B ? -150.78 6.16 34 1 SER H 214 ? ? -127.94 -62.37 35 1 ASP H 243 ? ? -44.58 -76.78 36 1 PHE H 245 ? ? -80.43 -106.97 37 1 GLU P 58 ? ? -46.82 155.06 38 1 TYS P 63 ? ? -76.81 44.30 39 1 LEU P 64 ? ? -158.89 59.65 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id H _pdbx_validate_planes.auth_seq_id 228 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.072 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_molecule_features.prd_id PRD_000254 _pdbx_molecule_features.name 'methyl N-(4-carbamimidamidobutanoyl)-L-phenylalanyl-L-allothreonyl-L-phenylalaninate' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000254 _pdbx_molecule.asym_id D # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 63 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET THE SHEETS PRESENTED AS B1 AND B2 ON SHEET RECORDS BELOW ACTUALLY COMPRISE SIX-STRANDED BETA-BARRELS. THESE ARE REPRESENTED BY SEVEN-STRANDED SHEETS IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # _pdbx_entry_details.entry_id 1HDT _pdbx_entry_details.compound_details ;THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN INDICATOR *L* IS USED FOR RESIDUES 1H - 15. CHAIN INDICATOR *H* IS USED FOR RESIDUES 16 - 247. CHAIN INDICATOR *P* IS USED FOR THE HIRUGEN PEPTIDE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR IS DESCRIBED AS A FOUR RESIDUE PSEUDO-PEPTIDE CONTAINING AN ALKYL-GUANIDINO GROUP (ALG), TWO PHENYLALANINE GROUPS, AND AN ALLO-THREONINE (ALO) GROUP. ; _pdbx_entry_details.sequence_details ;CHYMOTRYPSIN NUMBERING (RATHER THAN SEQUENTIAL) SYSTEM IS USED, BASED ON THE TOPOLOGICAL ALIGNMENT WITH THE STRUCTURE OF CHYMOTRYPSIN (W. BODE ET AL., 1989, EMBO J. 8, 3467 - 3475). ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id P _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 54 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0E7 C C N N 1 0E7 O O N N 2 0E7 CA C N N 3 0E7 CB C N N 4 0E7 CD C N N 5 0E7 NE N N N 6 0E7 CZ C N N 7 0E7 NH1 N N N 8 0E7 NH2 N N N 9 0E7 N N N N 10 0E7 CA1 C N S 11 0E7 C1 C N N 12 0E7 O1 O N N 13 0E7 CB1 C N N 14 0E7 CG C Y N 15 0E7 CD1 C Y N 16 0E7 CD2 C Y N 17 0E7 CE1 C Y N 18 0E7 CE2 C Y N 19 0E7 CZ1 C Y N 20 0E7 N1 N N N 21 0E7 CA2 C N S 22 0E7 CB2 C N S 23 0E7 CG2 C N N 24 0E7 OG1 O N N 25 0E7 C2 C N N 26 0E7 O2 O N N 27 0E7 N2 N N N 28 0E7 CA3 C N S 29 0E7 C3 C N N 30 0E7 CB3 C N N 31 0E7 CG1 C Y N 32 0E7 CD11 C Y N 33 0E7 CD21 C Y N 34 0E7 CE11 C Y N 35 0E7 CE21 C Y N 36 0E7 CZ2 C Y N 37 0E7 O3 O N N 38 0E7 CM C N N 39 0E7 OXT O N N 40 0E7 HA1 H N N 41 0E7 HA2 H N N 42 0E7 HB1 H N N 43 0E7 HB2 H N N 44 0E7 HD1 H N N 45 0E7 HD2 H N N 46 0E7 HNE H N N 47 0E7 HH1 H N N 48 0E7 HH21 H N N 49 0E7 HH22 H N N 50 0E7 H H N N 51 0E7 HA H N N 52 0E7 HB21 H N N 53 0E7 HB3 H N N 54 0E7 HD11 H N N 55 0E7 HD21 H N N 56 0E7 HE1 H N N 57 0E7 HE2 H N N 58 0E7 HZ H N N 59 0E7 H1 H N N 60 0E7 HA3 H N N 61 0E7 HB H N N 62 0E7 HG21 H N N 63 0E7 HG22 H N N 64 0E7 HG23 H N N 65 0E7 HG1 H N N 66 0E7 HN2 H N N 67 0E7 HA4 H N N 68 0E7 HBC1 H N N 69 0E7 HBC2 H N N 70 0E7 HD12 H N N 71 0E7 HD22 H N N 72 0E7 HE11 H N N 73 0E7 HE21 H N N 74 0E7 HZ1 H N N 75 0E7 HMC1 H N N 76 0E7 HMC2 H N N 77 0E7 HMC3 H N N 78 ALA N N N N 79 ALA CA C N S 80 ALA C C N N 81 ALA O O N N 82 ALA CB C N N 83 ALA OXT O N N 84 ALA H H N N 85 ALA H2 H N N 86 ALA HA H N N 87 ALA HB1 H N N 88 ALA HB2 H N N 89 ALA HB3 H N N 90 ALA HXT H N N 91 ARG N N N N 92 ARG CA C N S 93 ARG C C N N 94 ARG O O N N 95 ARG CB C N N 96 ARG CG C N N 97 ARG CD C N N 98 ARG NE N N N 99 ARG CZ C N N 100 ARG NH1 N N N 101 ARG NH2 N N N 102 ARG OXT O N N 103 ARG H H N N 104 ARG H2 H N N 105 ARG HA H N N 106 ARG HB2 H N N 107 ARG HB3 H N N 108 ARG HG2 H N N 109 ARG HG3 H N N 110 ARG HD2 H N N 111 ARG HD3 H N N 112 ARG HE H N N 113 ARG HH11 H N N 114 ARG HH12 H N N 115 ARG HH21 H N N 116 ARG HH22 H N N 117 ARG HXT H N N 118 ASN N N N N 119 ASN CA C N S 120 ASN C C N N 121 ASN O O N N 122 ASN CB C N N 123 ASN CG C N N 124 ASN OD1 O N N 125 ASN ND2 N N N 126 ASN OXT O N N 127 ASN H H N N 128 ASN H2 H N N 129 ASN HA H N N 130 ASN HB2 H N N 131 ASN HB3 H N N 132 ASN HD21 H N N 133 ASN HD22 H N N 134 ASN HXT H N N 135 ASP N N N N 136 ASP CA C N S 137 ASP C C N N 138 ASP O O N N 139 ASP CB C N N 140 ASP CG C N N 141 ASP OD1 O N N 142 ASP OD2 O N N 143 ASP OXT O N N 144 ASP H H N N 145 ASP H2 H N N 146 ASP HA H N N 147 ASP HB2 H N N 148 ASP HB3 H N N 149 ASP HD2 H N N 150 ASP HXT H N N 151 CYS N N N N 152 CYS CA C N R 153 CYS C C N N 154 CYS O O N N 155 CYS CB C N N 156 CYS SG S N N 157 CYS OXT O N N 158 CYS H H N N 159 CYS H2 H N N 160 CYS HA H N N 161 CYS HB2 H N N 162 CYS HB3 H N N 163 CYS HG H N N 164 CYS HXT H N N 165 GLN N N N N 166 GLN CA C N S 167 GLN C C N N 168 GLN O O N N 169 GLN CB C N N 170 GLN CG C N N 171 GLN CD C N N 172 GLN OE1 O N N 173 GLN NE2 N N N 174 GLN OXT O N N 175 GLN H H N N 176 GLN H2 H N N 177 GLN HA H N N 178 GLN HB2 H N N 179 GLN HB3 H N N 180 GLN HG2 H N N 181 GLN HG3 H N N 182 GLN HE21 H N N 183 GLN HE22 H N N 184 GLN HXT H N N 185 GLU N N N N 186 GLU CA C N S 187 GLU C C N N 188 GLU O O N N 189 GLU CB C N N 190 GLU CG C N N 191 GLU CD C N N 192 GLU OE1 O N N 193 GLU OE2 O N N 194 GLU OXT O N N 195 GLU H H N N 196 GLU H2 H N N 197 GLU HA H N N 198 GLU HB2 H N N 199 GLU HB3 H N N 200 GLU HG2 H N N 201 GLU HG3 H N N 202 GLU HE2 H N N 203 GLU HXT H N N 204 GLY N N N N 205 GLY CA C N N 206 GLY C C N N 207 GLY O O N N 208 GLY OXT O N N 209 GLY H H N N 210 GLY H2 H N N 211 GLY HA2 H N N 212 GLY HA3 H N N 213 GLY HXT H N N 214 HIS N N N N 215 HIS CA C N S 216 HIS C C N N 217 HIS O O N N 218 HIS CB C N N 219 HIS CG C Y N 220 HIS ND1 N Y N 221 HIS CD2 C Y N 222 HIS CE1 C Y N 223 HIS NE2 N Y N 224 HIS OXT O N N 225 HIS H H N N 226 HIS H2 H N N 227 HIS HA H N N 228 HIS HB2 H N N 229 HIS HB3 H N N 230 HIS HD1 H N N 231 HIS HD2 H N N 232 HIS HE1 H N N 233 HIS HE2 H N N 234 HIS HXT H N N 235 HOH O O N N 236 HOH H1 H N N 237 HOH H2 H N N 238 ILE N N N N 239 ILE CA C N S 240 ILE C C N N 241 ILE O O N N 242 ILE CB C N S 243 ILE CG1 C N N 244 ILE CG2 C N N 245 ILE CD1 C N N 246 ILE OXT O N N 247 ILE H H N N 248 ILE H2 H N N 249 ILE HA H N N 250 ILE HB H N N 251 ILE HG12 H N N 252 ILE HG13 H N N 253 ILE HG21 H N N 254 ILE HG22 H N N 255 ILE HG23 H N N 256 ILE HD11 H N N 257 ILE HD12 H N N 258 ILE HD13 H N N 259 ILE HXT H N N 260 LEU N N N N 261 LEU CA C N S 262 LEU C C N N 263 LEU O O N N 264 LEU CB C N N 265 LEU CG C N N 266 LEU CD1 C N N 267 LEU CD2 C N N 268 LEU OXT O N N 269 LEU H H N N 270 LEU H2 H N N 271 LEU HA H N N 272 LEU HB2 H N N 273 LEU HB3 H N N 274 LEU HG H N N 275 LEU HD11 H N N 276 LEU HD12 H N N 277 LEU HD13 H N N 278 LEU HD21 H N N 279 LEU HD22 H N N 280 LEU HD23 H N N 281 LEU HXT H N N 282 LYS N N N N 283 LYS CA C N S 284 LYS C C N N 285 LYS O O N N 286 LYS CB C N N 287 LYS CG C N N 288 LYS CD C N N 289 LYS CE C N N 290 LYS NZ N N N 291 LYS OXT O N N 292 LYS H H N N 293 LYS H2 H N N 294 LYS HA H N N 295 LYS HB2 H N N 296 LYS HB3 H N N 297 LYS HG2 H N N 298 LYS HG3 H N N 299 LYS HD2 H N N 300 LYS HD3 H N N 301 LYS HE2 H N N 302 LYS HE3 H N N 303 LYS HZ1 H N N 304 LYS HZ2 H N N 305 LYS HZ3 H N N 306 LYS HXT H N N 307 MET N N N N 308 MET CA C N S 309 MET C C N N 310 MET O O N N 311 MET CB C N N 312 MET CG C N N 313 MET SD S N N 314 MET CE C N N 315 MET OXT O N N 316 MET H H N N 317 MET H2 H N N 318 MET HA H N N 319 MET HB2 H N N 320 MET HB3 H N N 321 MET HG2 H N N 322 MET HG3 H N N 323 MET HE1 H N N 324 MET HE2 H N N 325 MET HE3 H N N 326 MET HXT H N N 327 PHE N N N N 328 PHE CA C N S 329 PHE C C N N 330 PHE O O N N 331 PHE CB C N N 332 PHE CG C Y N 333 PHE CD1 C Y N 334 PHE CD2 C Y N 335 PHE CE1 C Y N 336 PHE CE2 C Y N 337 PHE CZ C Y N 338 PHE OXT O N N 339 PHE H H N N 340 PHE H2 H N N 341 PHE HA H N N 342 PHE HB2 H N N 343 PHE HB3 H N N 344 PHE HD1 H N N 345 PHE HD2 H N N 346 PHE HE1 H N N 347 PHE HE2 H N N 348 PHE HZ H N N 349 PHE HXT H N N 350 PRO N N N N 351 PRO CA C N S 352 PRO C C N N 353 PRO O O N N 354 PRO CB C N N 355 PRO CG C N N 356 PRO CD C N N 357 PRO OXT O N N 358 PRO H H N N 359 PRO HA H N N 360 PRO HB2 H N N 361 PRO HB3 H N N 362 PRO HG2 H N N 363 PRO HG3 H N N 364 PRO HD2 H N N 365 PRO HD3 H N N 366 PRO HXT H N N 367 SER N N N N 368 SER CA C N S 369 SER C C N N 370 SER O O N N 371 SER CB C N N 372 SER OG O N N 373 SER OXT O N N 374 SER H H N N 375 SER H2 H N N 376 SER HA H N N 377 SER HB2 H N N 378 SER HB3 H N N 379 SER HG H N N 380 SER HXT H N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 TYS N N N N 450 TYS CA C N S 451 TYS CB C N N 452 TYS CG C Y N 453 TYS CD1 C Y N 454 TYS CD2 C Y N 455 TYS CE1 C Y N 456 TYS CE2 C Y N 457 TYS CZ C Y N 458 TYS OH O N N 459 TYS S S N N 460 TYS O1 O N N 461 TYS O2 O N N 462 TYS O3 O N N 463 TYS C C N N 464 TYS O O N N 465 TYS OXT O N N 466 TYS H H N N 467 TYS H2 H N N 468 TYS HA H N N 469 TYS HB2 H N N 470 TYS HB3 H N N 471 TYS HD1 H N N 472 TYS HD2 H N N 473 TYS HE1 H N N 474 TYS HE2 H N N 475 TYS HO3 H N N 476 TYS HXT H N N 477 VAL N N N N 478 VAL CA C N S 479 VAL C C N N 480 VAL O O N N 481 VAL CB C N N 482 VAL CG1 C N N 483 VAL CG2 C N N 484 VAL OXT O N N 485 VAL H H N N 486 VAL H2 H N N 487 VAL HA H N N 488 VAL HB H N N 489 VAL HG11 H N N 490 VAL HG12 H N N 491 VAL HG13 H N N 492 VAL HG21 H N N 493 VAL HG22 H N N 494 VAL HG23 H N N 495 VAL HXT H N N 496 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0E7 C O doub N N 1 0E7 C CA sing N N 2 0E7 CA CB sing N N 3 0E7 CA HA1 sing N N 4 0E7 CA HA2 sing N N 5 0E7 CB CD sing N N 6 0E7 CB HB1 sing N N 7 0E7 CB HB2 sing N N 8 0E7 CD NE sing N N 9 0E7 CD HD1 sing N N 10 0E7 CD HD2 sing N N 11 0E7 NE CZ sing N N 12 0E7 NE HNE sing N N 13 0E7 CZ NH1 doub N N 14 0E7 CZ NH2 sing N N 15 0E7 NH1 HH1 sing N N 16 0E7 NH2 HH21 sing N N 17 0E7 NH2 HH22 sing N N 18 0E7 N CA1 sing N N 19 0E7 N H sing N N 20 0E7 CA1 C1 sing N N 21 0E7 CA1 CB1 sing N N 22 0E7 CA1 HA sing N N 23 0E7 C1 O1 doub N N 24 0E7 CB1 CG sing N N 25 0E7 CB1 HB21 sing N N 26 0E7 CB1 HB3 sing N N 27 0E7 CG CD1 doub Y N 28 0E7 CG CD2 sing Y N 29 0E7 CD1 CE1 sing Y N 30 0E7 CD1 HD11 sing N N 31 0E7 CD2 CE2 doub Y N 32 0E7 CD2 HD21 sing N N 33 0E7 CE1 CZ1 doub Y N 34 0E7 CE1 HE1 sing N N 35 0E7 CE2 CZ1 sing Y N 36 0E7 CE2 HE2 sing N N 37 0E7 CZ1 HZ sing N N 38 0E7 N1 CA2 sing N N 39 0E7 N1 H1 sing N N 40 0E7 CA2 CB2 sing N N 41 0E7 CA2 C2 sing N N 42 0E7 CA2 HA3 sing N N 43 0E7 CB2 CG2 sing N N 44 0E7 CB2 OG1 sing N N 45 0E7 CB2 HB sing N N 46 0E7 CG2 HG21 sing N N 47 0E7 CG2 HG22 sing N N 48 0E7 CG2 HG23 sing N N 49 0E7 OG1 HG1 sing N N 50 0E7 C2 O2 doub N N 51 0E7 N2 CA3 sing N N 52 0E7 N2 HN2 sing N N 53 0E7 CA3 C3 sing N N 54 0E7 CA3 CB3 sing N N 55 0E7 CA3 HA4 sing N N 56 0E7 C3 O3 doub N N 57 0E7 C3 OXT sing N N 58 0E7 CB3 CG1 sing N N 59 0E7 CB3 HBC1 sing N N 60 0E7 CB3 HBC2 sing N N 61 0E7 CG1 CD11 sing Y N 62 0E7 CG1 CD21 doub Y N 63 0E7 CD11 CE11 doub Y N 64 0E7 CD11 HD12 sing N N 65 0E7 CD21 CE21 sing Y N 66 0E7 CD21 HD22 sing N N 67 0E7 CE11 CZ2 sing Y N 68 0E7 CE11 HE11 sing N N 69 0E7 CE21 CZ2 doub Y N 70 0E7 CE21 HE21 sing N N 71 0E7 CZ2 HZ1 sing N N 72 0E7 CM HMC1 sing N N 73 0E7 OXT CM sing N N 74 0E7 CM HMC2 sing N N 75 0E7 CM HMC3 sing N N 76 0E7 C N sing N N 77 0E7 C1 N1 sing N N 78 0E7 C2 N2 sing N N 79 ALA N CA sing N N 80 ALA N H sing N N 81 ALA N H2 sing N N 82 ALA CA C sing N N 83 ALA CA CB sing N N 84 ALA CA HA sing N N 85 ALA C O doub N N 86 ALA C OXT sing N N 87 ALA CB HB1 sing N N 88 ALA CB HB2 sing N N 89 ALA CB HB3 sing N N 90 ALA OXT HXT sing N N 91 ARG N CA sing N N 92 ARG N H sing N N 93 ARG N H2 sing N N 94 ARG CA C sing N N 95 ARG CA CB sing N N 96 ARG CA HA sing N N 97 ARG C O doub N N 98 ARG C OXT sing N N 99 ARG CB CG sing N N 100 ARG CB HB2 sing N N 101 ARG CB HB3 sing N N 102 ARG CG CD sing N N 103 ARG CG HG2 sing N N 104 ARG CG HG3 sing N N 105 ARG CD NE sing N N 106 ARG CD HD2 sing N N 107 ARG CD HD3 sing N N 108 ARG NE CZ sing N N 109 ARG NE HE sing N N 110 ARG CZ NH1 sing N N 111 ARG CZ NH2 doub N N 112 ARG NH1 HH11 sing N N 113 ARG NH1 HH12 sing N N 114 ARG NH2 HH21 sing N N 115 ARG NH2 HH22 sing N N 116 ARG OXT HXT sing N N 117 ASN N CA sing N N 118 ASN N H sing N N 119 ASN N H2 sing N N 120 ASN CA C sing N N 121 ASN CA CB sing N N 122 ASN CA HA sing N N 123 ASN C O doub N N 124 ASN C OXT sing N N 125 ASN CB CG sing N N 126 ASN CB HB2 sing N N 127 ASN CB HB3 sing N N 128 ASN CG OD1 doub N N 129 ASN CG ND2 sing N N 130 ASN ND2 HD21 sing N N 131 ASN ND2 HD22 sing N N 132 ASN OXT HXT sing N N 133 ASP N CA sing N N 134 ASP N H sing N N 135 ASP N H2 sing N N 136 ASP CA C sing N N 137 ASP CA CB sing N N 138 ASP CA HA sing N N 139 ASP C O doub N N 140 ASP C OXT sing N N 141 ASP CB CG sing N N 142 ASP CB HB2 sing N N 143 ASP CB HB3 sing N N 144 ASP CG OD1 doub N N 145 ASP CG OD2 sing N N 146 ASP OD2 HD2 sing N N 147 ASP OXT HXT sing N N 148 CYS N CA sing N N 149 CYS N H sing N N 150 CYS N H2 sing N N 151 CYS CA C sing N N 152 CYS CA CB sing N N 153 CYS CA HA sing N N 154 CYS C O doub N N 155 CYS C OXT sing N N 156 CYS CB SG sing N N 157 CYS CB HB2 sing N N 158 CYS CB HB3 sing N N 159 CYS SG HG sing N N 160 CYS OXT HXT sing N N 161 GLN N CA sing N N 162 GLN N H sing N N 163 GLN N H2 sing N N 164 GLN CA C sing N N 165 GLN CA CB sing N N 166 GLN CA HA sing N N 167 GLN C O doub N N 168 GLN C OXT sing N N 169 GLN CB CG sing N N 170 GLN CB HB2 sing N N 171 GLN CB HB3 sing N N 172 GLN CG CD sing N N 173 GLN CG HG2 sing N N 174 GLN CG HG3 sing N N 175 GLN CD OE1 doub N N 176 GLN CD NE2 sing N N 177 GLN NE2 HE21 sing N N 178 GLN NE2 HE22 sing N N 179 GLN OXT HXT sing N N 180 GLU N CA sing N N 181 GLU N H sing N N 182 GLU N H2 sing N N 183 GLU CA C sing N N 184 GLU CA CB sing N N 185 GLU CA HA sing N N 186 GLU C O doub N N 187 GLU C OXT sing N N 188 GLU CB CG sing N N 189 GLU CB HB2 sing N N 190 GLU CB HB3 sing N N 191 GLU CG CD sing N N 192 GLU CG HG2 sing N N 193 GLU CG HG3 sing N N 194 GLU CD OE1 doub N N 195 GLU CD OE2 sing N N 196 GLU OE2 HE2 sing N N 197 GLU OXT HXT sing N N 198 GLY N CA sing N N 199 GLY N H sing N N 200 GLY N H2 sing N N 201 GLY CA C sing N N 202 GLY CA HA2 sing N N 203 GLY CA HA3 sing N N 204 GLY C O doub N N 205 GLY C OXT sing N N 206 GLY OXT HXT sing N N 207 HIS N CA sing N N 208 HIS N H sing N N 209 HIS N H2 sing N N 210 HIS CA C sing N N 211 HIS CA CB sing N N 212 HIS CA HA sing N N 213 HIS C O doub N N 214 HIS C OXT sing N N 215 HIS CB CG sing N N 216 HIS CB HB2 sing N N 217 HIS CB HB3 sing N N 218 HIS CG ND1 sing Y N 219 HIS CG CD2 doub Y N 220 HIS ND1 CE1 doub Y N 221 HIS ND1 HD1 sing N N 222 HIS CD2 NE2 sing Y N 223 HIS CD2 HD2 sing N N 224 HIS CE1 NE2 sing Y N 225 HIS CE1 HE1 sing N N 226 HIS NE2 HE2 sing N N 227 HIS OXT HXT sing N N 228 HOH O H1 sing N N 229 HOH O H2 sing N N 230 ILE N CA sing N N 231 ILE N H sing N N 232 ILE N H2 sing N N 233 ILE CA C sing N N 234 ILE CA CB sing N N 235 ILE CA HA sing N N 236 ILE C O doub N N 237 ILE C OXT sing N N 238 ILE CB CG1 sing N N 239 ILE CB CG2 sing N N 240 ILE CB HB sing N N 241 ILE CG1 CD1 sing N N 242 ILE CG1 HG12 sing N N 243 ILE CG1 HG13 sing N N 244 ILE CG2 HG21 sing N N 245 ILE CG2 HG22 sing N N 246 ILE CG2 HG23 sing N N 247 ILE CD1 HD11 sing N N 248 ILE CD1 HD12 sing N N 249 ILE CD1 HD13 sing N N 250 ILE OXT HXT sing N N 251 LEU N CA sing N N 252 LEU N H sing N N 253 LEU N H2 sing N N 254 LEU CA C sing N N 255 LEU CA CB sing N N 256 LEU CA HA sing N N 257 LEU C O doub N N 258 LEU C OXT sing N N 259 LEU CB CG sing N N 260 LEU CB HB2 sing N N 261 LEU CB HB3 sing N N 262 LEU CG CD1 sing N N 263 LEU CG CD2 sing N N 264 LEU CG HG sing N N 265 LEU CD1 HD11 sing N N 266 LEU CD1 HD12 sing N N 267 LEU CD1 HD13 sing N N 268 LEU CD2 HD21 sing N N 269 LEU CD2 HD22 sing N N 270 LEU CD2 HD23 sing N N 271 LEU OXT HXT sing N N 272 LYS N CA sing N N 273 LYS N H sing N N 274 LYS N H2 sing N N 275 LYS CA C sing N N 276 LYS CA CB sing N N 277 LYS CA HA sing N N 278 LYS C O doub N N 279 LYS C OXT sing N N 280 LYS CB CG sing N N 281 LYS CB HB2 sing N N 282 LYS CB HB3 sing N N 283 LYS CG CD sing N N 284 LYS CG HG2 sing N N 285 LYS CG HG3 sing N N 286 LYS CD CE sing N N 287 LYS CD HD2 sing N N 288 LYS CD HD3 sing N N 289 LYS CE NZ sing N N 290 LYS CE HE2 sing N N 291 LYS CE HE3 sing N N 292 LYS NZ HZ1 sing N N 293 LYS NZ HZ2 sing N N 294 LYS NZ HZ3 sing N N 295 LYS OXT HXT sing N N 296 MET N CA sing N N 297 MET N H sing N N 298 MET N H2 sing N N 299 MET CA C sing N N 300 MET CA CB sing N N 301 MET CA HA sing N N 302 MET C O doub N N 303 MET C OXT sing N N 304 MET CB CG sing N N 305 MET CB HB2 sing N N 306 MET CB HB3 sing N N 307 MET CG SD sing N N 308 MET CG HG2 sing N N 309 MET CG HG3 sing N N 310 MET SD CE sing N N 311 MET CE HE1 sing N N 312 MET CE HE2 sing N N 313 MET CE HE3 sing N N 314 MET OXT HXT sing N N 315 PHE N CA sing N N 316 PHE N H sing N N 317 PHE N H2 sing N N 318 PHE CA C sing N N 319 PHE CA CB sing N N 320 PHE CA HA sing N N 321 PHE C O doub N N 322 PHE C OXT sing N N 323 PHE CB CG sing N N 324 PHE CB HB2 sing N N 325 PHE CB HB3 sing N N 326 PHE CG CD1 doub Y N 327 PHE CG CD2 sing Y N 328 PHE CD1 CE1 sing Y N 329 PHE CD1 HD1 sing N N 330 PHE CD2 CE2 doub Y N 331 PHE CD2 HD2 sing N N 332 PHE CE1 CZ doub Y N 333 PHE CE1 HE1 sing N N 334 PHE CE2 CZ sing Y N 335 PHE CE2 HE2 sing N N 336 PHE CZ HZ sing N N 337 PHE OXT HXT sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 TYS N CA sing N N 437 TYS N H sing N N 438 TYS N H2 sing N N 439 TYS CA CB sing N N 440 TYS CA C sing N N 441 TYS CA HA sing N N 442 TYS CB CG sing N N 443 TYS CB HB2 sing N N 444 TYS CB HB3 sing N N 445 TYS CG CD1 doub Y N 446 TYS CG CD2 sing Y N 447 TYS CD1 CE1 sing Y N 448 TYS CD1 HD1 sing N N 449 TYS CD2 CE2 doub Y N 450 TYS CD2 HD2 sing N N 451 TYS CE1 CZ doub Y N 452 TYS CE1 HE1 sing N N 453 TYS CE2 CZ sing Y N 454 TYS CE2 HE2 sing N N 455 TYS CZ OH sing N N 456 TYS OH S sing N N 457 TYS S O1 doub N N 458 TYS S O2 doub N N 459 TYS S O3 sing N N 460 TYS O3 HO3 sing N N 461 TYS C O doub N N 462 TYS C OXT sing N N 463 TYS OXT HXT sing N N 464 VAL N CA sing N N 465 VAL N H sing N N 466 VAL N H2 sing N N 467 VAL CA C sing N N 468 VAL CA CB sing N N 469 VAL CA HA sing N N 470 VAL C O doub N N 471 VAL C OXT sing N N 472 VAL CB CG1 sing N N 473 VAL CB CG2 sing N N 474 VAL CB HB sing N N 475 VAL CG1 HG11 sing N N 476 VAL CG1 HG12 sing N N 477 VAL CG1 HG13 sing N N 478 VAL CG2 HG21 sing N N 479 VAL CG2 HG22 sing N N 480 VAL CG2 HG23 sing N N 481 VAL OXT HXT sing N N 482 # _atom_sites.entry_id 1HDT _atom_sites.fract_transf_matrix[1][1] 0.009177 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012358 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021659 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_