data_1HH3
# 
_entry.id   1HH3 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.329 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
PDB   1HH3         
PDBE  EBI-5696     
WWPDB D_1290005696 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.content_type 
_pdbx_database_related.details 
PDB 1HHA unspecified 'CRYSTAL STRUCTURE OF DECAPLANIN - SPACE GROUP P6122'              
PDB 1HHC unspecified 'CRYSTAL STRUCTURE OF DECAPLANIN - SPACE GROUP P21, SECOND FORM'   
PDB 1HHF unspecified 'CRYSTAL STRUCTURE OF DECAPLANIN - SPACE GROUP P6122, SECOND FORM' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1HH3 
_pdbx_database_status.deposit_site                    PDBE 
_pdbx_database_status.process_site                    PDBE 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.recvd_initial_deposition_date   2000-12-19 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Lehmann, C.'     1 
'Vertessy, L.'    2 
'Sheldrick, G.M.' 3 
'Dauter, Z.'      4 
'Dauter, M.'      5 
# 
_citation.id                        primary 
_citation.title                     'Structures of Four Crystal Forms of Decaplanin' 
_citation.journal_abbrev            Helv.Chim.Acta 
_citation.journal_volume            86 
_citation.page_first                1478 
_citation.page_last                 ? 
_citation.year                      2003 
_citation.journal_id_ASTM           HCACAV 
_citation.country                   SZ 
_citation.journal_id_ISSN           0018-019X 
_citation.journal_id_CSD            0010 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   ? 
_citation.pdbx_database_id_DOI      10.1002/HLCA.200390131 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Lehmann, C.'      1 ? 
primary 'Debreczeni, J.E.' 2 ? 
primary 'Bunkoczi, G.'     3 ? 
primary 'Dauter, M.'       4 ? 
primary 'Dauter, Z.'       5 ? 
primary 'Vertesy, L.'      6 ? 
primary 'Sheldrick, G.M.'  7 ? 
# 
_cell.entry_id           1HH3 
_cell.length_a           25.604 
_cell.length_b           38.598 
_cell.length_c           31.713 
_cell.angle_alpha        90.00 
_cell.angle_beta         105.88 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1HH3 
_symmetry.space_group_name_H-M             'P 1 21 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                4 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     nat DECAPLANIN                                          1115.532 4   ? ? ? ? 
2 branched    man 'alpha-L-rhamnopyranose-(1-2)-beta-D-glucopyranose' 326.297  4   ? ? ? ? 
3 non-polymer man 4-epi-vancosamine                                   161.199  4   ? ? ? ? 
4 non-polymer syn GLYCEROL                                            92.094   3   ? ? ? ? 
5 water       nat water                                               18.015   162 ? ? ? ? 
# 
_entity_name_com.entity_id   1 
_entity_name_com.name        M86-1410 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           'polypeptide(L)' 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(MLU)(OMZ)N(GHP)(GHP)(OMX)(3FG)' 
_entity_poly.pdbx_seq_one_letter_code_can   XXNGGYX 
_entity_poly.pdbx_strand_id                 A,B,C,D 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 MLU n 
1 2 OMZ n 
1 3 ASN n 
1 4 GHP n 
1 5 GHP n 
1 6 OMX n 
1 7 3FG n 
# 
_entity_src_nat.entity_id                  1 
_entity_src_nat.pdbx_src_id                1 
_entity_src_nat.pdbx_alt_source_flag       sample 
_entity_src_nat.pdbx_beg_seq_num           ? 
_entity_src_nat.pdbx_end_seq_num           ? 
_entity_src_nat.common_name                ? 
_entity_src_nat.pdbx_organism_scientific   'UNCULTURED ACTINOMYCETE' 
_entity_src_nat.pdbx_ncbi_taxonomy_id      100235 
_entity_src_nat.genus                      ? 
_entity_src_nat.species                    ? 
_entity_src_nat.strain                     'DSM 4763' 
_entity_src_nat.tissue                     ? 
_entity_src_nat.tissue_fraction            ? 
_entity_src_nat.pdbx_secretion             ? 
_entity_src_nat.pdbx_fragment              ? 
_entity_src_nat.pdbx_variant               ? 
_entity_src_nat.pdbx_cell_line             ? 
_entity_src_nat.pdbx_atcc                  ? 
_entity_src_nat.pdbx_cellular_location     ? 
_entity_src_nat.pdbx_organ                 ? 
_entity_src_nat.pdbx_organelle             ? 
_entity_src_nat.pdbx_cell                  ? 
_entity_src_nat.pdbx_plasmid_name          ? 
_entity_src_nat.pdbx_plasmid_details       ? 
_entity_src_nat.details                    'CULTURE Y-86, 36910' 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    NOR 
_struct_ref.db_code                    NOR00692 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_db_accession          NOR00692 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1HH3 A 1 ? 7 ? NOR00692 1 ? 7 ? 1 7 
2 1 1HH3 B 1 ? 7 ? NOR00692 1 ? 7 ? 1 7 
3 1 1HH3 C 1 ? 7 ? NOR00692 1 ? 7 ? 1 7 
4 1 1HH3 D 1 ? 7 ? NOR00692 1 ? 7 ? 1 7 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
3FG 'L-peptide linking'           . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ?                               'C8 H9 N O4' 
183.161 
ASN 'L-peptide linking'           y ASPARAGINE                                     ?                               'C4 H8 N2 O3' 
132.118 
BGC 'D-saccharide, beta linking'  . beta-D-glucopyranose                           ?                               'C6 H12 O6' 
180.156 
ERE 'L-saccharide, alpha linking' . 4-epi-vancosamine                              4-EPI-VANCOSAMINE               'C7 H15 N O3' 
161.199 
GHP 'D-peptide linking'           . '(2R)-amino(4-hydroxyphenyl)ethanoic acid'     ?                               'C8 H9 N O3' 
167.162 
GOL non-polymer                   . GLYCEROL                                       'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 
92.094  
HOH non-polymer                   . WATER                                          ?                               'H2 O' 18.015  
MLU 'D-peptide linking'           . N-methyl-D-leucine                             ?                               'C7 H15 N O2' 
145.199 
OMX 'L-peptide linking'           n '(betaR)-beta-hydroxy-L-Tyrosine'              ?                               'C9 H11 N O4' 
197.188 
OMZ 'D-peptide linking'           . '(betaR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE'     ?                               
'C9 H10 Cl N O4' 231.633 
RAM 'L-saccharide, alpha linking' . alpha-L-rhamnopyranose                         ?                               'C6 H12 O5' 
164.156 
# 
_exptl.entry_id          1HH3 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.37 
_exptl_crystal.density_percent_sol   51.9 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          ? 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              8.50 
_exptl_crystal_grow.pdbx_pH_range   ? 
_exptl_crystal_grow.pdbx_details    '39% LI2SO4, 0.2M TRIS 8.5, 20% GLYCEROL, pH 8.50' 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100.0 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   CHESS 
_diffrn_detector.pdbx_collection_date   1999-10-15 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.98000 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'NSLS BEAMLINE X9B' 
_diffrn_source.pdbx_synchrotron_site       NSLS 
_diffrn_source.pdbx_synchrotron_beamline   X9B 
_diffrn_source.pdbx_wavelength             0.98000 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
_reflns.entry_id                     1HH3 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             30.500 
_reflns.d_resolution_high            1.000 
_reflns.number_obs                   32325 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         98.5 
_reflns.pdbx_Rmerge_I_obs            0.04800 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        12.2200 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              10.200 
# 
_reflns_shell.pdbx_diffrn_id         1 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.d_res_high             1.00 
_reflns_shell.d_res_low              1.10 
_reflns_shell.percent_possible_all   96.2 
_reflns_shell.Rmerge_I_obs           0.16600 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    4.450 
_reflns_shell.pdbx_redundancy        2.50 
# 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.entry_id                                 1HH3 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.ls_number_reflns_obs                     ? 
_refine.ls_number_reflns_all                     31754 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.0 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             30.5 
_refine.ls_d_res_high                            1.00 
_refine.ls_percent_reflns_obs                    98.5 
_refine.ls_R_factor_obs                          0.1148 
_refine.ls_R_factor_all                          0.1159 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       0.1478 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 4.83 
_refine.ls_number_reflns_R_free                  1535 
_refine.ls_number_parameters                     5659 
_refine.ls_number_restraints                     7613 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'DIRECT METHODS' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'ENGH AND HUBER' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            SHELLS 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
_refine_analyze.entry_id                        1HH3 
_refine_analyze.Luzzati_coordinate_error_obs    ? 
_refine_analyze.Luzzati_sigma_a_obs             ? 
_refine_analyze.Luzzati_d_res_low_obs           ? 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      3 
_refine_analyze.occupancy_sum_hydrogen          352.2 
_refine_analyze.occupancy_sum_non_hydrogen      150.9 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        311 
_refine_hist.pdbx_number_atoms_nucleic_acid   0 
_refine_hist.pdbx_number_atoms_ligand         142 
_refine_hist.number_atoms_solvent             162 
_refine_hist.number_atoms_total               615 
_refine_hist.d_res_high                       1.00 
_refine_hist.d_res_low                        30.5 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d               0.017 ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d              0.029 ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_dist         0.014 ? ? ? 'X-RAY DIFFRACTION' ? 
s_from_restr_planes    0.091 ? ? ? 'X-RAY DIFFRACTION' ? 
s_zero_chiral_vol      0.099 ? ? ? 'X-RAY DIFFRACTION' ? 
s_non_zero_chiral_vol  ?     ? ? ? 'X-RAY DIFFRACTION' ? 
s_anti_bump_dis_restr  0.059 ? ? ? 'X-RAY DIFFRACTION' ? 
s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_adp_cmpnt    0.028 ? ? ? 'X-RAY DIFFRACTION' ? 
s_approx_iso_adps      0.119 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.entry_id                                    1HH3 
_pdbx_refine.R_factor_all_no_cutoff                      0.1159 
_pdbx_refine.R_factor_obs_no_cutoff                      0.1148 
_pdbx_refine.free_R_factor_no_cutoff                     0.1478 
_pdbx_refine.free_R_error_no_cutoff                      ? 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     4.83 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            1535 
_pdbx_refine.R_factor_all_4sig_cutoff                    0.1064 
_pdbx_refine.R_factor_obs_4sig_cutoff                    0.1054 
_pdbx_refine.free_R_factor_4sig_cutoff                   0.1381 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   4.81 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          1335 
_pdbx_refine.number_reflns_obs_4sig_cutoff               27724 
# 
loop_
_struct_ncs_oper.id 
_struct_ncs_oper.code 
_struct_ncs_oper.details 
_struct_ncs_oper.matrix[1][1] 
_struct_ncs_oper.matrix[1][2] 
_struct_ncs_oper.matrix[1][3] 
_struct_ncs_oper.matrix[2][1] 
_struct_ncs_oper.matrix[2][2] 
_struct_ncs_oper.matrix[2][3] 
_struct_ncs_oper.matrix[3][1] 
_struct_ncs_oper.matrix[3][2] 
_struct_ncs_oper.matrix[3][3] 
_struct_ncs_oper.vector[1] 
_struct_ncs_oper.vector[2] 
_struct_ncs_oper.vector[3] 
1 given ? -0.912980 -0.042330 -0.405800 -0.070920 -0.963000 0.260020 -0.401790 0.266170  0.876200  21.28236 8.59140 3.72184  
2 given ? -0.943570 -0.329310 -0.035070 -0.330350 0.928500  0.169600 -0.023290 0.171610  -0.984890 33.79558 1.72432 -6.57555 
3 given ? 0.899700  0.341580  0.271790  0.173270  -0.850930 0.495880 0.400650  -0.399050 -0.824770 10.61809 3.43680 -9.36413 
# 
_struct.entry_id                  1HH3 
_struct.title                     'Decaplanin first P21-Form' 
_struct.pdbx_descriptor           DECAPLANIN 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1HH3 
_struct_keywords.pdbx_keywords   ANTIBIOTIC 
_struct_keywords.text            'ANTIBIOTIC, GLYCOPEPTIDE' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 1 ? 
D N N 1 ? 
E N N 2 ? 
F N N 2 ? 
G N N 2 ? 
H N N 2 ? 
I N N 3 ? 
J N N 3 ? 
K N N 4 ? 
L N N 4 ? 
M N N 3 ? 
N N N 3 ? 
O N N 4 ? 
P N N 5 ? 
Q N N 5 ? 
R N N 5 ? 
S N N 5 ? 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A MLU 1 C  A ? ? 1_555 A OMZ 2 N   ? ? A MLU 1 A OMZ 2 1_555 ? ? ? ? ? ? ? 1.353 ? ? 
covale2  covale both ? A MLU 1 C  B ? ? 1_555 A OMZ 2 N   ? ? A MLU 1 A OMZ 2 1_555 ? ? ? ? ? ? ? 1.355 ? ? 
covale3  covale both ? A OMZ 2 C  ? ? ? 1_555 A ASN 3 N   ? ? A OMZ 2 A ASN 3 1_555 ? ? ? ? ? ? ? 1.322 ? ? 
covale4  covale none ? A OMZ 2 OH ? ? ? 1_555 A GHP 4 C5  ? ? A OMZ 2 A GHP 4 1_555 ? ? ? ? ? ? ? 1.391 ? ? 
covale5  covale both ? A ASN 3 C  ? ? ? 1_555 A GHP 4 N   ? ? A ASN 3 A GHP 4 1_555 ? ? ? ? ? ? ? 1.342 ? ? 
covale6  covale both ? A GHP 4 C  ? ? ? 1_555 A GHP 5 N   ? ? A GHP 4 A GHP 5 1_555 ? ? ? ? ? ? ? 1.338 ? ? 
covale7  covale none ? A GHP 4 C3 ? ? ? 1_555 A OMX 6 OH  ? ? A GHP 4 A OMX 6 1_555 ? ? ? ? ? ? ? 1.377 ? ? 
covale8  covale one  ? A GHP 4 O4 ? ? ? 1_555 E BGC . C1  ? ? A GHP 4 E BGC 1 1_555 ? ? ? ? ? ? ? 1.403 ? ? 
covale9  covale both ? A GHP 5 C  ? ? ? 1_555 A OMX 6 N   ? ? A GHP 5 A OMX 6 1_555 ? ? ? ? ? ? ? 1.347 ? ? 
covale10 covale none ? A GHP 5 C3 ? ? ? 1_555 A 3FG 7 CG1 ? ? A GHP 5 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.508 ? ? 
covale11 covale both ? A OMX 6 C  ? ? ? 1_555 A 3FG 7 N   ? ? A OMX 6 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.330 ? ? 
covale12 covale one  ? A OMX 6 OC ? ? ? 1_555 I ERE . C1  ? ? A OMX 6 A ERE 8 1_555 ? ? ? ? ? ? ? 1.398 ? ? 
covale13 covale both ? B MLU 1 C  ? ? ? 1_555 B OMZ 2 N   ? ? B MLU 1 B OMZ 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? 
covale14 covale both ? B OMZ 2 C  ? ? ? 1_555 B ASN 3 N   ? ? B OMZ 2 B ASN 3 1_555 ? ? ? ? ? ? ? 1.336 ? ? 
covale15 covale none ? B OMZ 2 OH ? ? ? 1_555 B GHP 4 C5  ? ? B OMZ 2 B GHP 4 1_555 ? ? ? ? ? ? ? 1.396 ? ? 
covale16 covale both ? B ASN 3 C  ? ? ? 1_555 B GHP 4 N   ? ? B ASN 3 B GHP 4 1_555 ? ? ? ? ? ? ? 1.325 ? ? 
covale17 covale both ? B GHP 4 C  ? ? ? 1_555 B GHP 5 N   ? ? B GHP 4 B GHP 5 1_555 ? ? ? ? ? ? ? 1.347 ? ? 
covale18 covale none ? B GHP 4 C3 ? ? ? 1_555 B OMX 6 OH  ? ? B GHP 4 B OMX 6 1_555 ? ? ? ? ? ? ? 1.392 ? ? 
covale19 covale one  ? B GHP 4 O4 ? ? ? 1_555 F BGC . C1  ? ? B GHP 4 F BGC 1 1_555 ? ? ? ? ? ? ? 1.414 ? ? 
covale20 covale both ? B GHP 5 C  ? ? ? 1_555 B OMX 6 N   ? ? B GHP 5 B OMX 6 1_555 ? ? ? ? ? ? ? 1.335 ? ? 
covale21 covale none ? B GHP 5 C3 ? ? ? 1_555 B 3FG 7 CG1 ? ? B GHP 5 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.502 ? ? 
covale22 covale both ? B OMX 6 C  ? ? ? 1_555 B 3FG 7 N   ? ? B OMX 6 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.337 ? ? 
covale23 covale one  ? B OMX 6 OC ? ? ? 1_555 J ERE . C1  ? ? B OMX 6 B ERE 8 1_555 ? ? ? ? ? ? ? 1.392 ? ? 
covale24 covale both ? C MLU 1 C  ? ? ? 1_555 C OMZ 2 N   ? ? C MLU 1 C OMZ 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? 
covale25 covale both ? C OMZ 2 C  ? ? ? 1_555 C ASN 3 N   ? ? C OMZ 2 C ASN 3 1_555 ? ? ? ? ? ? ? 1.336 ? ? 
covale26 covale none ? C OMZ 2 OH ? ? ? 1_555 C GHP 4 C5  ? ? C OMZ 2 C GHP 4 1_555 ? ? ? ? ? ? ? 1.396 ? ? 
covale27 covale both ? C ASN 3 C  ? ? ? 1_555 C GHP 4 N   ? ? C ASN 3 C GHP 4 1_555 ? ? ? ? ? ? ? 1.336 ? ? 
covale28 covale both ? C GHP 4 C  ? ? ? 1_555 C GHP 5 N   ? ? C GHP 4 C GHP 5 1_555 ? ? ? ? ? ? ? 1.346 ? ? 
covale29 covale none ? C GHP 4 C3 ? ? ? 1_555 C OMX 6 OH  ? ? C GHP 4 C OMX 6 1_555 ? ? ? ? ? ? ? 1.385 ? ? 
covale30 covale one  ? C GHP 4 O4 ? ? ? 1_555 G BGC . C1  ? ? C GHP 4 G BGC 1 1_555 ? ? ? ? ? ? ? 1.432 ? ? 
covale31 covale both ? C GHP 5 C  ? ? ? 1_555 C OMX 6 N   ? ? C GHP 5 C OMX 6 1_555 ? ? ? ? ? ? ? 1.345 ? ? 
covale32 covale none ? C GHP 5 C3 ? ? ? 1_555 C 3FG 7 CG1 ? ? C GHP 5 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.513 ? ? 
covale33 covale both ? C OMX 6 C  ? ? ? 1_555 C 3FG 7 N   ? ? C OMX 6 C 3FG 7 1_555 ? ? ? ? ? ? ? 1.328 ? ? 
covale34 covale one  ? C OMX 6 OC ? ? ? 1_555 M ERE . C1  ? ? C OMX 6 C ERE 8 1_555 ? ? ? ? ? ? ? 1.402 ? ? 
covale35 covale both ? D MLU 1 C  ? ? ? 1_555 D OMZ 2 N   ? ? D MLU 1 D OMZ 2 1_555 ? ? ? ? ? ? ? 1.343 ? ? 
covale36 covale both ? D OMZ 2 C  ? ? ? 1_555 D ASN 3 N   ? ? D OMZ 2 D ASN 3 1_555 ? ? ? ? ? ? ? 1.301 ? ? 
covale37 covale none ? D OMZ 2 OH ? ? ? 1_555 D GHP 4 C5  ? ? D OMZ 2 D GHP 4 1_555 ? ? ? ? ? ? ? 1.388 ? ? 
covale38 covale both ? D ASN 3 C  ? ? ? 1_555 D GHP 4 N   ? ? D ASN 3 D GHP 4 1_555 ? ? ? ? ? ? ? 1.321 ? ? 
covale39 covale both ? D GHP 4 C  ? ? ? 1_555 D GHP 5 N   ? ? D GHP 4 D GHP 5 1_555 ? ? ? ? ? ? ? 1.345 ? ? 
covale40 covale none ? D GHP 4 C3 ? ? ? 1_555 D OMX 6 OH  ? ? D GHP 4 D OMX 6 1_555 ? ? ? ? ? ? ? 1.379 ? ? 
covale41 covale one  ? D GHP 4 O4 ? ? ? 1_555 H BGC . C1  ? ? D GHP 4 H BGC 1 1_555 ? ? ? ? ? ? ? 1.426 ? ? 
covale42 covale both ? D GHP 5 C  ? ? ? 1_555 D OMX 6 N   ? ? D GHP 5 D OMX 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? 
covale43 covale none ? D GHP 5 C3 ? ? ? 1_555 D 3FG 7 CG1 ? ? D GHP 5 D 3FG 7 1_555 ? ? ? ? ? ? ? 1.498 ? ? 
covale44 covale both ? D OMX 6 C  ? ? ? 1_555 D 3FG 7 N   ? ? D OMX 6 D 3FG 7 1_555 ? ? ? ? ? ? ? 1.326 ? ? 
covale45 covale one  ? D OMX 6 OC ? ? ? 1_555 N ERE . C1  ? ? D OMX 6 D ERE 8 1_555 ? ? ? ? ? ? ? 1.396 ? ? 
covale46 covale one  ? E BGC . O2 ? ? ? 1_555 E RAM . C1  ? ? E BGC 1 E RAM 2 1_555 ? ? ? ? ? ? ? 1.395 ? ? 
covale47 covale one  ? F BGC . O2 ? ? ? 1_555 F RAM . C1  ? ? F BGC 1 F RAM 2 1_555 ? ? ? ? ? ? ? 1.437 ? ? 
covale48 covale one  ? G BGC . O2 ? ? ? 1_555 G RAM . C1  ? ? G BGC 1 G RAM 2 1_555 ? ? ? ? ? ? ? 1.438 ? ? 
covale49 covale one  ? H BGC . O2 ? ? ? 1_555 H RAM . C1  ? ? H BGC 1 H RAM 2 1_555 ? ? ? ? ? ? ? 1.454 ? ? 
# 
_struct_conn_type.id          covale 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_struct_mon_prot_cis.pdbx_id 
_struct_mon_prot_cis.label_comp_id 
_struct_mon_prot_cis.label_seq_id 
_struct_mon_prot_cis.label_asym_id 
_struct_mon_prot_cis.label_alt_id 
_struct_mon_prot_cis.pdbx_PDB_ins_code 
_struct_mon_prot_cis.auth_comp_id 
_struct_mon_prot_cis.auth_seq_id 
_struct_mon_prot_cis.auth_asym_id 
_struct_mon_prot_cis.pdbx_label_comp_id_2 
_struct_mon_prot_cis.pdbx_label_seq_id_2 
_struct_mon_prot_cis.pdbx_label_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 
_struct_mon_prot_cis.pdbx_auth_comp_id_2 
_struct_mon_prot_cis.pdbx_auth_seq_id_2 
_struct_mon_prot_cis.pdbx_auth_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_model_num 
_struct_mon_prot_cis.pdbx_omega_angle 
1 GHP 5 A . ? GHP 5 A OMX 6 A ? OMX 6 A 1 13.03 
2 GHP 5 B . ? GHP 5 B OMX 6 B ? OMX 6 B 1 9.71  
3 GHP 5 C . ? GHP 5 C OMX 6 C ? OMX 6 C 1 3.72  
4 GHP 5 D . ? GHP 5 D OMX 6 D ? OMX 6 D 1 4.47  
# 
_database_PDB_matrix.entry_id          1HH3 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    1HH3 
_atom_sites.fract_transf_matrix[1][1]   0.039056 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.011111 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.025908 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.032784 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
CL 
N  
O  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 MLU 1 1 1 MLU MLU A . n 
A 1 2 OMZ 2 2 2 OMZ OMZ A . n 
A 1 3 ASN 3 3 3 ASN ASN A . n 
A 1 4 GHP 4 4 4 GHP GHP A . n 
A 1 5 GHP 5 5 5 GHP GHP A . n 
A 1 6 OMX 6 6 6 OMX OMX A . n 
A 1 7 3FG 7 7 7 3FG 3FG A . n 
B 1 1 MLU 1 1 1 MLU MLU B . n 
B 1 2 OMZ 2 2 2 OMZ OMZ B . n 
B 1 3 ASN 3 3 3 ASN ASN B . n 
B 1 4 GHP 4 4 4 GHP GHP B . n 
B 1 5 GHP 5 5 5 GHP GHP B . n 
B 1 6 OMX 6 6 6 OMX OMX B . n 
B 1 7 3FG 7 7 7 3FG 3FG B . n 
C 1 1 MLU 1 1 1 MLU MLU C . n 
C 1 2 OMZ 2 2 2 OMZ OMZ C . n 
C 1 3 ASN 3 3 3 ASN ASN C . n 
C 1 4 GHP 4 4 4 GHP GHP C . n 
C 1 5 GHP 5 5 5 GHP GHP C . n 
C 1 6 OMX 6 6 6 OMX OMX C . n 
C 1 7 3FG 7 7 7 3FG 3FG C . n 
D 1 1 MLU 1 1 1 MLU MLU D . n 
D 1 2 OMZ 2 2 2 OMZ OMZ D . n 
D 1 3 ASN 3 3 3 ASN ASN D . n 
D 1 4 GHP 4 4 4 GHP GHP D . n 
D 1 5 GHP 5 5 5 GHP GHP D . n 
D 1 6 OMX 6 6 6 OMX OMX D . n 
D 1 7 3FG 7 7 7 3FG 3FG D . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
I 3 ERE 1  8    8    ERE ERE A . 
J 3 ERE 1  8    8    ERE ERE B . 
K 4 GOL 1  1001 1001 GOL GOL B . 
L 4 GOL 1  1002 1002 GOL GOL B . 
M 3 ERE 1  8    8    ERE ERE C . 
N 3 ERE 1  8    8    ERE ERE D . 
O 4 GOL 1  1003 1003 GOL GOL D . 
P 5 HOH 1  2001 2001 HOH HOH A . 
P 5 HOH 2  2002 2002 HOH HOH A . 
P 5 HOH 3  2003 2003 HOH HOH A . 
P 5 HOH 4  2004 2004 HOH HOH A . 
P 5 HOH 5  2005 2005 HOH HOH A . 
P 5 HOH 6  2006 2006 HOH HOH A . 
P 5 HOH 7  2007 2007 HOH HOH A . 
P 5 HOH 8  2008 2008 HOH HOH A . 
P 5 HOH 9  2009 2009 HOH HOH A . 
P 5 HOH 10 2010 2010 HOH HOH A . 
P 5 HOH 11 2011 2011 HOH HOH A . 
P 5 HOH 12 2012 2012 HOH HOH A . 
P 5 HOH 13 2013 2013 HOH HOH A . 
P 5 HOH 14 2014 2014 HOH HOH A . 
P 5 HOH 15 2015 2015 HOH HOH A . 
P 5 HOH 16 2016 2016 HOH HOH A . 
P 5 HOH 17 2017 2017 HOH HOH A . 
P 5 HOH 18 2018 2018 HOH HOH A . 
P 5 HOH 19 2019 2019 HOH HOH A . 
P 5 HOH 20 2020 2020 HOH HOH A . 
P 5 HOH 21 2021 2021 HOH HOH A . 
P 5 HOH 22 2022 2022 HOH HOH A . 
P 5 HOH 23 2023 2023 HOH HOH A . 
P 5 HOH 24 2024 2024 HOH HOH A . 
P 5 HOH 25 2025 2025 HOH HOH A . 
P 5 HOH 26 2026 2026 HOH HOH A . 
P 5 HOH 27 2027 2027 HOH HOH A . 
P 5 HOH 28 2028 2028 HOH HOH A . 
P 5 HOH 29 2029 2029 HOH HOH A . 
P 5 HOH 30 2030 2030 HOH HOH A . 
P 5 HOH 31 2031 2031 HOH HOH A . 
P 5 HOH 32 2032 2032 HOH HOH A . 
P 5 HOH 33 2033 2033 HOH HOH A . 
P 5 HOH 34 2034 2034 HOH HOH A . 
P 5 HOH 35 2035 2035 HOH HOH A . 
P 5 HOH 36 2036 2036 HOH HOH A . 
P 5 HOH 37 2037 2037 HOH HOH A . 
P 5 HOH 38 2038 2038 HOH HOH A . 
P 5 HOH 39 2039 2039 HOH HOH A . 
P 5 HOH 40 2040 2040 HOH HOH A . 
P 5 HOH 41 2041 2041 HOH HOH A . 
P 5 HOH 42 2042 2042 HOH HOH A . 
Q 5 HOH 1  2001 2001 HOH HOH B . 
Q 5 HOH 2  2002 2002 HOH HOH B . 
Q 5 HOH 3  2003 2003 HOH HOH B . 
Q 5 HOH 4  2004 2004 HOH HOH B . 
Q 5 HOH 5  2005 2005 HOH HOH B . 
Q 5 HOH 6  2006 2006 HOH HOH B . 
Q 5 HOH 7  2007 2007 HOH HOH B . 
Q 5 HOH 8  2008 2008 HOH HOH B . 
Q 5 HOH 9  2009 2009 HOH HOH B . 
Q 5 HOH 10 2010 2010 HOH HOH B . 
Q 5 HOH 11 2011 2011 HOH HOH B . 
Q 5 HOH 12 2012 2012 HOH HOH B . 
Q 5 HOH 13 2013 2013 HOH HOH B . 
Q 5 HOH 14 2014 2014 HOH HOH B . 
Q 5 HOH 15 2015 2015 HOH HOH B . 
Q 5 HOH 16 2016 2016 HOH HOH B . 
Q 5 HOH 17 2017 2017 HOH HOH B . 
Q 5 HOH 18 2018 2018 HOH HOH B . 
Q 5 HOH 19 2019 2019 HOH HOH B . 
Q 5 HOH 20 2020 2020 HOH HOH B . 
Q 5 HOH 21 2021 2021 HOH HOH B . 
Q 5 HOH 22 2022 2022 HOH HOH B . 
Q 5 HOH 23 2023 2023 HOH HOH B . 
Q 5 HOH 24 2024 2024 HOH HOH B . 
Q 5 HOH 25 2025 2025 HOH HOH B . 
Q 5 HOH 26 2026 2026 HOH HOH B . 
Q 5 HOH 27 2027 2027 HOH HOH B . 
Q 5 HOH 28 2028 2028 HOH HOH B . 
Q 5 HOH 29 2029 2029 HOH HOH B . 
Q 5 HOH 30 2030 2030 HOH HOH B . 
Q 5 HOH 31 2031 2031 HOH HOH B . 
Q 5 HOH 32 2032 2032 HOH HOH B . 
Q 5 HOH 33 2033 2033 HOH HOH B . 
Q 5 HOH 34 2034 2034 HOH HOH B . 
Q 5 HOH 35 2035 2035 HOH HOH B . 
Q 5 HOH 36 2036 2036 HOH HOH B . 
Q 5 HOH 37 2037 2037 HOH HOH B . 
Q 5 HOH 38 2038 2038 HOH HOH B . 
Q 5 HOH 39 2039 2039 HOH HOH B . 
Q 5 HOH 40 2040 2040 HOH HOH B . 
Q 5 HOH 41 2041 2041 HOH HOH B . 
Q 5 HOH 42 2042 2042 HOH HOH B . 
Q 5 HOH 43 2043 2043 HOH HOH B . 
Q 5 HOH 44 2044 2044 HOH HOH B . 
Q 5 HOH 45 2045 2045 HOH HOH B . 
Q 5 HOH 46 2046 2046 HOH HOH B . 
Q 5 HOH 47 2047 2047 HOH HOH B . 
R 5 HOH 1  2001 2001 HOH HOH C . 
R 5 HOH 2  2002 2002 HOH HOH C . 
R 5 HOH 3  2003 2003 HOH HOH C . 
R 5 HOH 4  2004 2004 HOH HOH C . 
R 5 HOH 5  2005 2005 HOH HOH C . 
R 5 HOH 6  2006 2006 HOH HOH C . 
R 5 HOH 7  2007 2007 HOH HOH C . 
R 5 HOH 8  2008 2008 HOH HOH C . 
R 5 HOH 9  2009 2009 HOH HOH C . 
R 5 HOH 10 2010 2010 HOH HOH C . 
R 5 HOH 11 2011 2011 HOH HOH C . 
R 5 HOH 12 2012 2012 HOH HOH C . 
R 5 HOH 13 2013 2013 HOH HOH C . 
R 5 HOH 14 2014 2014 HOH HOH C . 
R 5 HOH 15 2015 2015 HOH HOH C . 
R 5 HOH 16 2016 2016 HOH HOH C . 
R 5 HOH 17 2017 2017 HOH HOH C . 
R 5 HOH 18 2018 2018 HOH HOH C . 
R 5 HOH 19 2019 2019 HOH HOH C . 
R 5 HOH 20 2020 2020 HOH HOH C . 
R 5 HOH 21 2021 2021 HOH HOH C . 
R 5 HOH 22 2022 2022 HOH HOH C . 
R 5 HOH 23 2023 2023 HOH HOH C . 
R 5 HOH 24 2024 2024 HOH HOH C . 
R 5 HOH 25 2025 2025 HOH HOH C . 
R 5 HOH 26 2026 2026 HOH HOH C . 
R 5 HOH 27 2027 2027 HOH HOH C . 
R 5 HOH 28 2028 2028 HOH HOH C . 
R 5 HOH 29 2029 2029 HOH HOH C . 
R 5 HOH 30 2030 2030 HOH HOH C . 
R 5 HOH 31 2031 2031 HOH HOH C . 
R 5 HOH 32 2032 2032 HOH HOH C . 
R 5 HOH 33 2033 2033 HOH HOH C . 
R 5 HOH 34 2034 2034 HOH HOH C . 
R 5 HOH 35 2035 2035 HOH HOH C . 
R 5 HOH 36 2036 2036 HOH HOH C . 
R 5 HOH 37 2037 2037 HOH HOH C . 
R 5 HOH 38 2038 2038 HOH HOH C . 
R 5 HOH 39 2039 2039 HOH HOH C . 
S 5 HOH 1  2001 2001 HOH HOH D . 
S 5 HOH 2  2002 2002 HOH HOH D . 
S 5 HOH 3  2003 2003 HOH HOH D . 
S 5 HOH 4  2004 2004 HOH HOH D . 
S 5 HOH 5  2005 2005 HOH HOH D . 
S 5 HOH 6  2006 2006 HOH HOH D . 
S 5 HOH 7  2007 2007 HOH HOH D . 
S 5 HOH 8  2008 2008 HOH HOH D . 
S 5 HOH 9  2009 2009 HOH HOH D . 
S 5 HOH 10 2010 2010 HOH HOH D . 
S 5 HOH 11 2011 2011 HOH HOH D . 
S 5 HOH 12 2012 2012 HOH HOH D . 
S 5 HOH 13 2013 2013 HOH HOH D . 
S 5 HOH 14 2014 2014 HOH HOH D . 
S 5 HOH 15 2015 2015 HOH HOH D . 
S 5 HOH 16 2016 2016 HOH HOH D . 
S 5 HOH 17 2017 2017 HOH HOH D . 
S 5 HOH 18 2018 2018 HOH HOH D . 
S 5 HOH 19 2019 2019 HOH HOH D . 
S 5 HOH 20 2020 2020 HOH HOH D . 
S 5 HOH 21 2021 2021 HOH HOH D . 
S 5 HOH 22 2022 2022 HOH HOH D . 
S 5 HOH 23 2023 2023 HOH HOH D . 
S 5 HOH 24 2024 2024 HOH HOH D . 
S 5 HOH 25 2025 2025 HOH HOH D . 
S 5 HOH 26 2026 2026 HOH HOH D . 
S 5 HOH 27 2027 2027 HOH HOH D . 
S 5 HOH 28 2028 2028 HOH HOH D . 
S 5 HOH 29 2029 2029 HOH HOH D . 
S 5 HOH 30 2030 2030 HOH HOH D . 
S 5 HOH 31 2031 2031 HOH HOH D . 
S 5 HOH 32 2032 2032 HOH HOH D . 
S 5 HOH 33 2033 2033 HOH HOH D . 
S 5 HOH 34 2034 2034 HOH HOH D . 
# 
_pdbx_molecule_features.prd_id    PRD_000207 
_pdbx_molecule_features.name      Decaplanin 
_pdbx_molecule_features.type      Glycopeptide 
_pdbx_molecule_features.class     Antibiotic 
_pdbx_molecule_features.details   
;DECAPLANIN IS A TRICYCLIC GLYCOPEPTIDE.
 THE SCAFFOLD IS A HEPTAPEPTIDE WITH THE
 CONFIGURATION D-D-L-D-D-L-L, GLYCOSYLATED
;
# 
loop_
_pdbx_molecule.instance_id 
_pdbx_molecule.prd_id 
_pdbx_molecule.asym_id 
1 PRD_000207 A 
1 PRD_000207 E 
1 PRD_000207 I 
2 PRD_000207 B 
2 PRD_000207 F 
2 PRD_000207 J 
3 PRD_000207 C 
3 PRD_000207 G 
3 PRD_000207 M 
4 PRD_000207 D 
4 PRD_000207 H 
4 PRD_000207 N 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A OMX 6 A OMX 6 ? TYR '(BETAR)-BETA-HYDROXY-L-TYROSINE' 
2 B OMX 6 B OMX 6 ? TYR '(BETAR)-BETA-HYDROXY-L-TYROSINE' 
3 C OMX 6 C OMX 6 ? TYR '(BETAR)-BETA-HYDROXY-L-TYROSINE' 
4 D OMX 6 D OMX 6 ? TYR '(BETAR)-BETA-HYDROXY-L-TYROSINE' 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 author_and_software_defined_assembly PISA dimeric 2 
2 author_and_software_defined_assembly PISA dimeric 2 
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 1 A,B,E,F,I,J,K,L,P,Q 
2 1 C,D,G,H,M,N,O,R,S   
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2005-07-11 
2 'Structure model' 1 1 2011-07-13 
3 'Structure model' 1 2 2012-07-11 
4 'Structure model' 1 3 2012-11-30 
5 'Structure model' 1 4 2013-05-01 
6 'Structure model' 2 0 2019-04-24 
7 'Structure model' 3 0 2020-07-29 
# 
loop_
_pdbx_audit_revision_details.ordinal 
_pdbx_audit_revision_details.revision_ordinal 
_pdbx_audit_revision_details.data_content_type 
_pdbx_audit_revision_details.provider 
_pdbx_audit_revision_details.type 
_pdbx_audit_revision_details.description 
_pdbx_audit_revision_details.details 
1 1 'Structure model' repository 'Initial release' ?                          ? 
2 7 'Structure model' repository Remediation       'Carbohydrate remediation' ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1  2 'Structure model' 'Atomic model'              
2  2 'Structure model' 'Database references'       
3  2 'Structure model' 'Derived calculations'      
4  2 'Structure model' 'Structure summary'         
5  2 'Structure model' 'Version format compliance' 
6  3 'Structure model' Other                       
7  4 'Structure model' Other                       
8  5 'Structure model' 'Non-polymer description'   
9  6 'Structure model' 'Data collection'           
10 6 'Structure model' 'Derived calculations'      
11 6 'Structure model' Other                       
12 6 'Structure model' 'Polymer sequence'          
13 7 'Structure model' 'Atomic model'              
14 7 'Structure model' 'Data collection'           
15 7 'Structure model' 'Derived calculations'      
16 7 'Structure model' Other                       
17 7 'Structure model' 'Structure summary'         
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1  6 'Structure model' entity_poly                   
2  6 'Structure model' pdbx_database_proc            
3  6 'Structure model' pdbx_database_status          
4  6 'Structure model' pdbx_seq_map_depositor_info   
5  6 'Structure model' struct_conn                   
6  7 'Structure model' atom_site                     
7  7 'Structure model' atom_site_anisotrop           
8  7 'Structure model' chem_comp                     
9  7 'Structure model' entity                        
10 7 'Structure model' pdbx_branch_scheme            
11 7 'Structure model' pdbx_chem_comp_identifier     
12 7 'Structure model' pdbx_database_status          
13 7 'Structure model' pdbx_entity_branch            
14 7 'Structure model' pdbx_entity_branch_descriptor 
15 7 'Structure model' pdbx_entity_branch_link       
16 7 'Structure model' pdbx_entity_branch_list       
17 7 'Structure model' pdbx_entity_nonpoly           
18 7 'Structure model' pdbx_molecule                 
19 7 'Structure model' pdbx_nonpoly_scheme           
20 7 'Structure model' pdbx_struct_assembly_gen      
21 7 'Structure model' struct_asym                   
22 7 'Structure model' struct_conn                   
23 7 'Structure model' struct_site                   
24 7 'Structure model' struct_site_gen               
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  6 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'    
2  6 'Structure model' '_pdbx_database_status.recvd_author_approval'  
3  6 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code' 
4  6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'          
5  7 'Structure model' '_atom_site.B_iso_or_equiv'                    
6  7 'Structure model' '_atom_site.Cartn_x'                           
7  7 'Structure model' '_atom_site.Cartn_y'                           
8  7 'Structure model' '_atom_site.Cartn_z'                           
9  7 'Structure model' '_atom_site.auth_asym_id'                      
10 7 'Structure model' '_atom_site.auth_atom_id'                      
11 7 'Structure model' '_atom_site.auth_comp_id'                      
12 7 'Structure model' '_atom_site.auth_seq_id'                       
13 7 'Structure model' '_atom_site.label_alt_id'                      
14 7 'Structure model' '_atom_site.label_asym_id'                     
15 7 'Structure model' '_atom_site.label_atom_id'                     
16 7 'Structure model' '_atom_site.label_comp_id'                     
17 7 'Structure model' '_atom_site.label_entity_id'                   
18 7 'Structure model' '_atom_site.occupancy'                         
19 7 'Structure model' '_atom_site.type_symbol'                       
20 7 'Structure model' '_atom_site_anisotrop.U[1][1]'                 
21 7 'Structure model' '_atom_site_anisotrop.U[1][2]'                 
22 7 'Structure model' '_atom_site_anisotrop.U[1][3]'                 
23 7 'Structure model' '_atom_site_anisotrop.U[2][2]'                 
24 7 'Structure model' '_atom_site_anisotrop.U[2][3]'                 
25 7 'Structure model' '_atom_site_anisotrop.U[3][3]'                 
26 7 'Structure model' '_atom_site_anisotrop.id'                      
27 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id'       
28 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id'       
29 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id'       
30 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id'        
31 7 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id'       
32 7 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id'      
33 7 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id'      
34 7 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id'      
35 7 'Structure model' '_atom_site_anisotrop.type_symbol'             
36 7 'Structure model' '_chem_comp.name'                              
37 7 'Structure model' '_chem_comp.type'                              
38 7 'Structure model' '_pdbx_database_status.status_code_sf'         
39 7 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'       
40 7 'Structure model' '_struct_conn.pdbx_dist_value'                 
41 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'          
42 7 'Structure model' '_struct_conn.ptnr1_auth_asym_id'              
43 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id'              
44 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id'               
45 7 'Structure model' '_struct_conn.ptnr1_label_asym_id'             
46 7 'Structure model' '_struct_conn.ptnr1_label_atom_id'             
47 7 'Structure model' '_struct_conn.ptnr1_label_comp_id'             
48 7 'Structure model' '_struct_conn.ptnr1_label_seq_id'              
49 7 'Structure model' '_struct_conn.ptnr2_auth_asym_id'              
50 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id'              
51 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id'               
52 7 'Structure model' '_struct_conn.ptnr2_label_asym_id'             
53 7 'Structure model' '_struct_conn.ptnr2_label_atom_id'             
54 7 'Structure model' '_struct_conn.ptnr2_label_comp_id'             
55 7 'Structure model' '_struct_conn.ptnr2_label_seq_id'              
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
SHELXL-97 refinement       . ? 1 
DENZO     'data reduction' . ? 2 
SCALEPACK 'data scaling'   . ? 3 
SHELXD    phasing          . ? 4 
# 
_pdbx_entry_details.entry_id                 1HH3 
_pdbx_entry_details.compound_details         
;DECAPLANIN IS A TRICYCLIC GLYCOPEPTIDE.
HERE, DECAPLSNIN IS REPRESENTED BY GROUPING TOGETHER THE
SEQUENCE (SEQRES) AND THE THREE LIGANDS (HET) BGC, ERE AND RAM.

 GROUP: 1
  NAME: DECAPLANIN
  CHAIN: A, B, C, D
  COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 7
  COMPONENT_2: SUGAR RESIDUES 8, 9 AND 10
  DESCRIPTION: DECAPLANIN IS A TRICYCLIC GLYCOPEPTIDE.
               THE SCAFFOLD IS A HEPTAPEPTIDE WITH THE
               CONFIGURATION D-D-L-D-D-L-L, GLYCOSYLATED
;
_pdbx_entry_details.source_details           ? 
_pdbx_entry_details.nonpolymer_details       ? 
_pdbx_entry_details.sequence_details         ? 
_pdbx_entry_details.has_ligand_of_interest   ? 
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   O 
_pdbx_validate_close_contact.auth_asym_id_1   C 
_pdbx_validate_close_contact.auth_comp_id_1   HOH 
_pdbx_validate_close_contact.auth_seq_id_1    2009 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   O 
_pdbx_validate_close_contact.auth_asym_id_2   C 
_pdbx_validate_close_contact.auth_comp_id_2   HOH 
_pdbx_validate_close_contact.auth_seq_id_2    2010 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             2.16 
# 
loop_
_pdbx_distant_solvent_atoms.id 
_pdbx_distant_solvent_atoms.PDB_model_num 
_pdbx_distant_solvent_atoms.auth_atom_id 
_pdbx_distant_solvent_atoms.label_alt_id 
_pdbx_distant_solvent_atoms.auth_asym_id 
_pdbx_distant_solvent_atoms.auth_comp_id 
_pdbx_distant_solvent_atoms.auth_seq_id 
_pdbx_distant_solvent_atoms.PDB_ins_code 
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 
_pdbx_distant_solvent_atoms.neighbor_ligand_distance 
1 1 O ? A HOH 2021 ? .    6.83 
2 1 O ? B HOH 2019 ? 6.35 .    
# 
loop_
_pdbx_unobs_or_zero_occ_atoms.id 
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num 
_pdbx_unobs_or_zero_occ_atoms.polymer_flag 
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag 
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id 
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id 
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id 
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code 
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id 
_pdbx_unobs_or_zero_occ_atoms.label_alt_id 
_pdbx_unobs_or_zero_occ_atoms.label_asym_id 
_pdbx_unobs_or_zero_occ_atoms.label_comp_id 
_pdbx_unobs_or_zero_occ_atoms.label_seq_id 
_pdbx_unobs_or_zero_occ_atoms.label_atom_id 
1 1 Y 1 A MLU 1 ? N   ? A MLU 1 N   
2 1 Y 1 A MLU 1 ? CN  ? A MLU 1 CN  
3 1 Y 1 A MLU 1 ? CG  ? A MLU 1 CG  
4 1 Y 1 A MLU 1 ? CD1 ? A MLU 1 CD1 
5 1 Y 1 A MLU 1 ? CD2 ? A MLU 1 CD2 
# 
loop_
_pdbx_branch_scheme.asym_id 
_pdbx_branch_scheme.entity_id 
_pdbx_branch_scheme.mon_id 
_pdbx_branch_scheme.num 
_pdbx_branch_scheme.pdb_asym_id 
_pdbx_branch_scheme.pdb_mon_id 
_pdbx_branch_scheme.pdb_seq_num 
_pdbx_branch_scheme.auth_asym_id 
_pdbx_branch_scheme.auth_mon_id 
_pdbx_branch_scheme.auth_seq_num 
_pdbx_branch_scheme.hetero 
E 2 BGC 1 E BGC 1 A BGC 9  n 
E 2 RAM 2 E RAM 2 A RAM 10 n 
F 2 BGC 1 F BGC 1 B BGC 9  n 
F 2 RAM 2 F RAM 2 B RAM 10 n 
G 2 BGC 1 G BGC 1 C BGC 9  n 
G 2 RAM 2 G RAM 2 C RAM 10 n 
H 2 BGC 1 H BGC 1 D BGC 9  n 
H 2 RAM 2 H RAM 2 D RAM 10 n 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML     1.0 DGlcpb             
BGC 'COMMON NAME'                         GMML     1.0 b-D-glucopyranose  
BGC 'IUPAC CARBOHYDRATE SYMBOL'           PDB-CARE 1.0 b-D-Glcp           
BGC 'SNFG CARBOHYDRATE SYMBOL'            GMML     1.0 Glc                
RAM 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML     1.0 LRhapa             
RAM 'COMMON NAME'                         GMML     1.0 a-L-rhamnopyranose 
RAM 'IUPAC CARBOHYDRATE SYMBOL'           PDB-CARE 1.0 a-L-Rhap           
RAM 'SNFG CARBOHYDRATE SYMBOL'            GMML     1.0 Rha                
# 
_pdbx_entity_branch.entity_id   2 
_pdbx_entity_branch.type        oligosaccharide 
# 
loop_
_pdbx_entity_branch_descriptor.ordinal 
_pdbx_entity_branch_descriptor.entity_id 
_pdbx_entity_branch_descriptor.descriptor 
_pdbx_entity_branch_descriptor.type 
_pdbx_entity_branch_descriptor.program 
_pdbx_entity_branch_descriptor.program_version 
1 2 LRhapa1-2DGlcpb1-ROH                                       'Glycam Condensed Sequence' GMML       1.0   
2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2211m-1a_1-5]/1-2/a2-b1' WURCS                       PDB2Glycan 1.1.0 
3 2 '[][D-1-deoxy-Glcp]{[(2+1)][a-L-Rhap]{}}'                  LINUCS                      PDB-CARE   ?     
# 
_pdbx_entity_branch_link.link_id                    1 
_pdbx_entity_branch_link.entity_id                  2 
_pdbx_entity_branch_link.entity_branch_list_num_1   2 
_pdbx_entity_branch_link.comp_id_1                  RAM 
_pdbx_entity_branch_link.atom_id_1                  C1 
_pdbx_entity_branch_link.leaving_atom_id_1          O1 
_pdbx_entity_branch_link.entity_branch_list_num_2   1 
_pdbx_entity_branch_link.comp_id_2                  BGC 
_pdbx_entity_branch_link.atom_id_2                  O2 
_pdbx_entity_branch_link.leaving_atom_id_2          HO2 
_pdbx_entity_branch_link.value_order                sing 
_pdbx_entity_branch_link.details                    ? 
# 
loop_
_pdbx_entity_branch_list.entity_id 
_pdbx_entity_branch_list.comp_id 
_pdbx_entity_branch_list.num 
_pdbx_entity_branch_list.hetero 
2 BGC 1 n 
2 RAM 2 n 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
3 4-epi-vancosamine ERE 
4 GLYCEROL          GOL 
5 water             HOH 
#