HEADER TRANSFERASE 28-DEC-00 1HHS TITLE RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PROTEIN P2; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE PHI-6; SOURCE 3 ORGANISM_COMMON: PHAGE PHI 6; SOURCE 4 ORGANISM_TAXID: 10879; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RNA POLYMERASE, VIRAL POLYMERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.GRIMES,S.J.BUTCHER,E.V.MAKEYEV,D.H.BAMFORD,D.I.STUART REVDAT 4 08-MAY-24 1HHS 1 REMARK LINK REVDAT 3 01-SEP-09 1HHS 1 HEADER COMPND KEYWDS REMARK REVDAT 3 2 1 DBREF REVDAT 2 24-FEB-09 1HHS 1 VERSN REVDAT 1 27-MAR-01 1HHS 0 JRNL AUTH S.J.BUTCHER,J.M.GRIMES,E.V.MAKEYEV,D.H.BAMFORD,D.I.STUART JRNL TITL A MECHANISM FOR INITIATING RNA-DEPENDENT RNA POLYMERIZATION JRNL REF NATURE V. 410 235 2001 JRNL REFN ISSN 0028-0836 JRNL PMID 11242087 JRNL DOI 10.1038/35065653 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.J.BUTCHER,E.V.MAKEYEV,J.M.GRIMES,D.I.STUART,D.H.BAMFORD REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY CRYSTALLOGRAPHIC REMARK 1 TITL 2 STUDIES ON THE BACTERIOPHAGE PHI6 RNA-DEPENDENT RNA REMARK 1 TITL 3 POLYMERASE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. D56 1473 2000 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 11053857 REMARK 1 DOI 10.1107/S0907444900010702 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 0.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 180952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9067 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 2765 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.10000 REMARK 3 B22 (A**2) : -15.80000 REMARK 3 B33 (A**2) : 9.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.70000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 20.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 9.000 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 9.000 ; 8.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 17.000; 8.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 18.000; 10.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 72.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HHS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1290005730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.70 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 181000 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY TBA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 PROTEIN(5MG/ML) WELL SOLUTION: 10% REMARK 280 PEG 8000, 0.1M MES, 2 MM MNCL2, PH 6.70 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.68200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 P2 IS ONE OF THE 4 STRUCTURAL PROTEINS OF THE POLYHEDRAL REMARK 400 PROCAPSID. IT IS RESPONSIBLE FOR GENOMIC REPLICATION AND REMARK 400 TRANSCRIPTION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2256 O HOH A 2257 0.42 REMARK 500 OE1 GLN B 239 O HOH B 2491 0.51 REMARK 500 CZ2 TRP C 576 O HOH C 2823 0.52 REMARK 500 O ARG B 3 O HOH B 2009 0.63 REMARK 500 O HOH B 2274 O HOH B 2276 0.86 REMARK 500 NH2 ARG B 537 O HOH B 2778 0.94 REMARK 500 O HOH B 2279 O HOH B 2280 0.97 REMARK 500 O GLY C 478 O HOH C 2703 0.97 REMARK 500 C GLY C 478 O HOH C 2703 1.03 REMARK 500 O HOH A 2251 O HOH A 2253 1.03 REMARK 500 O HOH A 2261 O HOH A 2262 1.04 REMARK 500 CH2 TRP C 576 O HOH C 2823 1.06 REMARK 500 O HOH C 2821 O HOH C 2822 1.06 REMARK 500 CB ILE C 22 O HOH C 2079 1.09 REMARK 500 CD GLN B 239 O HOH B 2491 1.14 REMARK 500 CA PRO C 1 O HOH C 2001 1.15 REMARK 500 NH1 ARG B 537 O HOH B 2779 1.15 REMARK 500 CB ILE A 22 O HOH A 2071 1.19 REMARK 500 CG1 ILE B 22 O HOH B 2072 1.19 REMARK 500 CG ASP B 63 O HOH B 2177 1.20 REMARK 500 O HOH A 2424 O HOH A 2833 1.22 REMARK 500 O HOH B 2271 O HOH B 2273 1.22 REMARK 500 O ARG C 664 O HOH C 2931 1.24 REMARK 500 O HOH B 2024 O HOH B 2050 1.27 REMARK 500 CB ILE B 22 O HOH B 2072 1.27 REMARK 500 CG LEU B 213 O HOH B 2447 1.32 REMARK 500 CA GLY C 42 O HOH C 2144 1.33 REMARK 500 CZ ARG C 2 O HOH C 2007 1.39 REMARK 500 CE2 TRP C 576 O HOH C 2823 1.39 REMARK 500 OD1 ASP B 63 O HOH B 2177 1.40 REMARK 500 O SER C 582 O HOH C 2831 1.44 REMARK 500 CB LEU C 43 O HOH C 2145 1.47 REMARK 500 O HOH C 2268 O HOH C 2269 1.47 REMARK 500 CB SER B 534 O HOH B 2772 1.51 REMARK 500 O HOH B 2708 O HOH B 2710 1.51 REMARK 500 CB LEU B 213 O HOH B 2447 1.51 REMARK 500 CA LEU C 43 O HOH C 2145 1.53 REMARK 500 O HOH B 2486 O HOH B 2488 1.56 REMARK 500 CZ ARG B 537 O HOH B 2778 1.58 REMARK 500 CG2 ILE C 22 O HOH C 2079 1.64 REMARK 500 CG2 ILE A 22 O HOH A 2071 1.69 REMARK 500 OH TYR A 564 O HOH A 2767 1.71 REMARK 500 C GLY C 42 O HOH C 2144 1.73 REMARK 500 NE ARG C 2 O HOH C 2007 1.73 REMARK 500 O HOH A 2295 O HOH A 2613 1.76 REMARK 500 CB ARG C 664 O HOH C 2932 1.78 REMARK 500 NH1 ARG C 2 O HOH C 2007 1.78 REMARK 500 O HOH B 2311 O HOH B 2641 1.80 REMARK 500 O HOH C 2103 O HOH C 2104 1.80 REMARK 500 O HOH C 2818 O HOH C 2827 1.80 REMARK 500 REMARK 500 THIS ENTRY HAS 103 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS C 479 C ARG C 607 2445 0.93 REMARK 500 CE LYS C 479 N GLN C 608 2445 1.13 REMARK 500 O HOH A 2392 O HOH C 2828 1655 1.43 REMARK 500 NZ LYS C 479 N GLN C 608 2445 1.47 REMARK 500 O HOH B 2030 O HOH C 2317 2555 1.52 REMARK 500 CG GLU A 652 NH1 ARG C 664 2545 1.52 REMARK 500 OD2 ASP A 566 CG ARG C 2 2555 1.53 REMARK 500 NZ LYS C 479 O ARG C 607 2445 1.69 REMARK 500 NZ LYS C 479 CA ARG C 607 2445 1.79 REMARK 500 O HOH B 2046 O HOH C 2283 2555 1.81 REMARK 500 O HOH A 2773 O HOH C 2005 2555 1.90 REMARK 500 NH2 ARG B 537 N SER C 582 1655 1.95 REMARK 500 CE LYS C 479 C ARG C 607 2445 1.96 REMARK 500 O HOH B 2861 O HOH C 2067 1655 1.98 REMARK 500 CE2 PHE A 65 NH2 ARG C 2 2555 2.03 REMARK 500 CE LYS C 479 CA GLN C 608 2445 2.04 REMARK 500 CD LYS C 479 CB GLN C 608 2445 2.05 REMARK 500 CD ARG B 537 OE1 GLU C 581 1655 2.06 REMARK 500 O HOH C 2426 O HOH C 2472 2455 2.11 REMARK 500 O HOH B 2038 O HOH C 2327 2555 2.14 REMARK 500 O HOH A 2029 O HOH B 2263 2646 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 3 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLN A 206 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 LYS A 362 CD - CE - NZ ANGL. DEV. = -14.4 DEGREES REMARK 500 LEU A 404 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG B 3 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLN B 206 N - CA - C ANGL. DEV. = -18.3 DEGREES REMARK 500 LYS B 362 CD - CE - NZ ANGL. DEV. = -14.4 DEGREES REMARK 500 LEU B 404 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG C 3 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLN C 206 N - CA - C ANGL. DEV. = -18.3 DEGREES REMARK 500 LYS C 362 CD - CE - NZ ANGL. DEV. = -14.4 DEGREES REMARK 500 LEU C 404 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 99.52 85.06 REMARK 500 SER A 136 -91.27 -73.49 REMARK 500 CYS A 152 -138.99 49.91 REMARK 500 SER A 296 -70.19 -101.19 REMARK 500 THR A 305 -81.51 -122.98 REMARK 500 ASP A 327 57.95 39.50 REMARK 500 ASP A 386 26.95 -149.52 REMARK 500 THR A 418 -19.60 -141.32 REMARK 500 SER A 452 -120.53 48.23 REMARK 500 ASP A 504 -158.72 -107.08 REMARK 500 ARG A 607 -11.17 -47.27 REMARK 500 GLN A 608 36.36 -167.39 REMARK 500 ASP A 624 83.66 -150.54 REMARK 500 TYR A 630 -16.91 -164.86 REMARK 500 ARG B 2 99.49 85.10 REMARK 500 SER B 136 -91.31 -73.46 REMARK 500 CYS B 152 -139.04 49.96 REMARK 500 SER B 296 -70.19 -101.14 REMARK 500 THR B 305 -81.44 -122.99 REMARK 500 ASP B 327 57.91 39.55 REMARK 500 ASP B 386 26.93 -149.50 REMARK 500 THR B 418 -19.61 -141.34 REMARK 500 SER B 452 -120.52 48.17 REMARK 500 ASP B 504 -158.71 -107.04 REMARK 500 ARG B 607 -11.24 -47.27 REMARK 500 GLN B 608 36.37 -167.35 REMARK 500 ASP B 624 83.66 -150.58 REMARK 500 TYR B 630 -16.94 -164.86 REMARK 500 ARG C 2 99.56 85.08 REMARK 500 SER C 136 -91.26 -73.47 REMARK 500 CYS C 152 -138.98 49.97 REMARK 500 SER C 296 -70.21 -101.19 REMARK 500 THR C 305 -81.44 -123.02 REMARK 500 ASP C 327 57.94 39.49 REMARK 500 ASP C 386 26.90 -149.48 REMARK 500 THR C 418 -19.60 -141.33 REMARK 500 SER C 452 -120.53 48.22 REMARK 500 ASP C 504 -158.71 -107.11 REMARK 500 ARG C 607 -11.16 -47.21 REMARK 500 GLN C 608 36.41 -167.43 REMARK 500 ASP C 624 83.65 -150.54 REMARK 500 TYR C 630 -16.89 -164.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 199 0.07 SIDE CHAIN REMARK 500 TYR B 199 0.07 SIDE CHAIN REMARK 500 TYR C 199 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A2075 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A2085 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A2132 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B2006 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH B2077 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B2090 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH B2133 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B2140 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B2190 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH B2347 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B2437 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B2476 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH C2012 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH C2014 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH C2067 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH C2083 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH C2095 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH C2132 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH C2142 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH C2151 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH C2445 DISTANCE = 5.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 454 OD1 REMARK 620 2 GLU A 491 OE1 173.0 REMARK 620 3 ALA A 495 O 98.3 88.4 REMARK 620 4 HOH A2888 O 86.8 86.4 174.9 REMARK 620 5 HOH A2889 O 94.7 87.0 93.0 86.4 REMARK 620 6 HOH A2890 O 90.9 86.7 92.6 87.5 171.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 454 OD1 REMARK 620 2 GLU B 491 OE1 173.0 REMARK 620 3 ALA B 495 O 98.3 88.5 REMARK 620 4 HOH B2936 O 94.7 87.0 93.0 REMARK 620 5 HOH B2937 O 90.9 86.8 92.6 171.5 REMARK 620 6 HOH B2938 O 86.8 86.4 174.9 86.4 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 665 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 454 OD1 REMARK 620 2 GLU C 491 OE1 173.0 REMARK 620 3 ALA C 495 O 98.3 88.4 REMARK 620 4 HOH C2935 O 86.9 86.5 174.9 REMARK 620 5 HOH C2936 O 94.7 86.9 93.0 86.4 REMARK 620 6 HOH C2937 O 90.9 86.7 92.5 87.5 171.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 665 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HHT RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 TEMPLATE REMARK 900 RELATED ID: 1HI0 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 INITIATION COMPLEX REMARK 900 RELATED ID: 1HI1 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 BOUND NTP REMARK 900 RELATED ID: 1HI8 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 DBREF 1HHS A 1 664 UNP P11124 RDRP_BPPH6 1 664 DBREF 1HHS B 1 664 UNP P11124 RDRP_BPPH6 1 664 DBREF 1HHS C 1 664 UNP P11124 RDRP_BPPH6 1 664 SEQADV 1HHS MET A 456 UNP P11124 ILE 456 CONFLICT SEQADV 1HHS MET B 456 UNP P11124 ILE 456 CONFLICT SEQADV 1HHS MET C 456 UNP P11124 ILE 456 CONFLICT SEQRES 1 A 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 A 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 A 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 A 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 A 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 A 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 A 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 A 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 A 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 A 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 A 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 A 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 A 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 A 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 A 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 A 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 A 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 A 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 A 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 A 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 A 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 A 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 A 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 A 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 A 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 A 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 A 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 A 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 A 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 A 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 A 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 A 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 A 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 A 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 A 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 A 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 A 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 A 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 A 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 A 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 A 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 A 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 A 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 A 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 A 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 A 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 A 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 A 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 A 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 A 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 A 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 A 664 ARG SEQRES 1 B 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 B 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 B 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 B 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 B 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 B 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 B 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 B 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 B 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 B 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 B 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 B 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 B 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 B 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 B 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 B 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 B 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 B 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 B 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 B 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 B 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 B 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 B 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 B 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 B 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 B 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 B 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 B 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 B 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 B 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 B 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 B 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 B 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 B 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 B 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 B 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 B 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 B 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 B 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 B 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 B 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 B 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 B 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 B 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 B 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 B 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 B 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 B 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 B 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 B 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 B 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 B 664 ARG SEQRES 1 C 664 PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE LYS SEQRES 2 C 664 ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN GLN SEQRES 3 C 664 ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU THR SEQRES 4 C 664 TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SER SEQRES 5 C 664 PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS PHE SEQRES 6 C 664 PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY ASN SEQRES 7 C 664 GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET ASN SEQRES 8 C 664 GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SER SEQRES 9 C 664 ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP GLY SEQRES 10 C 664 PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA ALA SEQRES 11 C 664 VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO LEU SEQRES 12 C 664 LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR PHE SEQRES 13 C 664 SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU ARG SEQRES 14 C 664 ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET LEU SEQRES 15 C 664 GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN MET SEQRES 16 C 664 GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER THR SEQRES 17 C 664 ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE VAL SEQRES 18 C 664 SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA VAL SEQRES 19 C 664 THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER LYS SEQRES 20 C 664 ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP VAL SEQRES 21 C 664 PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA MET SEQRES 22 C 664 GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA VAL SEQRES 23 C 664 ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR ALA SEQRES 24 C 664 TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU GLU SEQRES 25 C 664 LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP VAL SEQRES 26 C 664 SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG ASP SEQRES 27 C 664 LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA PRO SEQRES 28 C 664 TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU PRO SEQRES 29 C 664 VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS THR SEQRES 30 C 664 LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL GLY SEQRES 31 C 664 LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY THR SEQRES 32 C 664 LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU ASP SEQRES 33 C 664 HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP MET SEQRES 34 C 664 PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN GLY SEQRES 35 C 664 HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP ALA SEQRES 36 C 664 MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY GLY SEQRES 37 C 664 HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL ASN SEQRES 38 C 664 PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY GLY SEQRES 39 C 664 ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG ARG SEQRES 40 C 664 GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SER SEQRES 41 C 664 MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL GLN SEQRES 42 C 664 SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO PHE SEQRES 43 C 664 PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR GLY SEQRES 44 C 664 ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE GLU SEQRES 45 C 664 ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG ALA SEQRES 46 C 664 TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU LEU SEQRES 47 C 664 SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY LEU SEQRES 48 C 664 ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA ASP SEQRES 49 C 664 PRO ASN LYS LEU GLN TYR LYS TRP THR GLU ALA ASP VAL SEQRES 50 C 664 SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SER SEQRES 51 C 664 VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET PRO SEQRES 52 C 664 ARG HET MN A 665 1 HET MN B 665 1 HET MN C 665 1 HETNAM MN MANGANESE (II) ION FORMUL 4 MN 3(MN 2+) FORMUL 7 HOH *2765(H2 O) HELIX 1 1 ASP A 11 MET A 16 1 6 HELIX 2 2 ASN A 21 ARG A 30 1 10 HELIX 3 3 ASP A 47 PHE A 65 1 19 HELIX 4 4 PHE A 84 MET A 87 5 4 HELIX 5 5 ASN A 105 ALA A 112 1 8 HELIX 6 6 SER A 120 SER A 136 1 17 HELIX 7 7 ASP A 159 GLN A 183 1 25 HELIX 8 8 LYS A 185 GLN A 194 1 10 HELIX 9 9 ASP A 229 THR A 235 1 7 HELIX 10 10 SER A 250 GLY A 257 1 8 HELIX 11 11 PRO A 276 LYS A 297 1 22 HELIX 12 12 TYR A 298 HIS A 303 1 6 HELIX 13 13 THR A 306 GLU A 316 1 11 HELIX 14 14 ASP A 327 TRP A 332 1 6 HELIX 15 15 PRO A 333 GLY A 348 1 16 HELIX 16 16 ALA A 350 LEU A 361 1 12 HELIX 17 17 ALA A 397 ALA A 419 1 23 HELIX 18 18 PRO A 420 ILE A 426 5 7 HELIX 19 19 ASP A 428 GLN A 441 1 14 HELIX 20 20 ALA A 464 GLY A 478 1 15 HELIX 21 21 GLU A 508 ALA A 512 5 5 HELIX 22 22 ASN A 517 SER A 527 1 11 HELIX 23 23 ASP A 538 ARG A 542 5 5 HELIX 24 24 PHE A 546 GLY A 548 5 3 HELIX 25 25 LEU A 549 GLY A 559 1 11 HELIX 26 26 ILE A 563 GLY A 580 1 18 HELIX 27 27 SER A 582 ARG A 600 1 19 HELIX 28 28 THR A 615 ASP A 624 1 10 HELIX 29 29 PRO A 625 GLN A 629 5 5 HELIX 30 30 THR A 633 VAL A 637 5 5 HELIX 31 31 SER A 638 LEU A 645 1 8 HELIX 32 32 SER A 650 MET A 662 1 13 HELIX 33 33 ASP B 11 MET B 16 1 6 HELIX 34 34 ASN B 21 ARG B 30 1 10 HELIX 35 35 ASP B 47 PHE B 65 1 19 HELIX 36 36 PHE B 84 MET B 87 5 4 HELIX 37 37 ASN B 105 ALA B 112 1 8 HELIX 38 38 SER B 120 SER B 136 1 17 HELIX 39 39 ASP B 159 GLN B 183 1 25 HELIX 40 40 LYS B 185 GLN B 194 1 10 HELIX 41 41 ASP B 229 THR B 235 1 7 HELIX 42 42 SER B 250 GLY B 257 1 8 HELIX 43 43 PRO B 276 LYS B 297 1 22 HELIX 44 44 TYR B 298 HIS B 303 1 6 HELIX 45 45 THR B 306 GLU B 316 1 11 HELIX 46 46 ASP B 327 TRP B 332 1 6 HELIX 47 47 PRO B 333 GLY B 348 1 16 HELIX 48 48 ALA B 350 LEU B 361 1 12 HELIX 49 49 ALA B 397 ALA B 419 1 23 HELIX 50 50 PRO B 420 ILE B 426 5 7 HELIX 51 51 ASP B 428 GLN B 441 1 14 HELIX 52 52 ALA B 464 GLY B 478 1 15 HELIX 53 53 GLU B 508 ALA B 512 5 5 HELIX 54 54 ASN B 517 SER B 527 1 11 HELIX 55 55 ASP B 538 ARG B 542 5 5 HELIX 56 56 PHE B 546 GLY B 548 5 3 HELIX 57 57 LEU B 549 GLY B 559 1 11 HELIX 58 58 ILE B 563 GLY B 580 1 18 HELIX 59 59 SER B 582 ARG B 600 1 19 HELIX 60 60 THR B 615 ASP B 624 1 10 HELIX 61 61 PRO B 625 GLN B 629 5 5 HELIX 62 62 THR B 633 VAL B 637 5 5 HELIX 63 63 SER B 638 LEU B 645 1 8 HELIX 64 64 SER B 650 MET B 662 1 13 HELIX 65 65 ASP C 11 MET C 16 1 6 HELIX 66 66 ASN C 21 ARG C 30 1 10 HELIX 67 67 ASP C 47 PHE C 65 1 19 HELIX 68 68 PHE C 84 MET C 87 5 4 HELIX 69 69 ASN C 105 ALA C 112 1 8 HELIX 70 70 SER C 120 SER C 136 1 17 HELIX 71 71 ASP C 159 GLN C 183 1 25 HELIX 72 72 LYS C 185 GLN C 194 1 10 HELIX 73 73 ASP C 229 THR C 235 1 7 HELIX 74 74 SER C 250 GLY C 257 1 8 HELIX 75 75 PRO C 276 LYS C 297 1 22 HELIX 76 76 TYR C 298 HIS C 303 1 6 HELIX 77 77 THR C 306 GLU C 316 1 11 HELIX 78 78 ASP C 327 TRP C 332 1 6 HELIX 79 79 PRO C 333 GLY C 348 1 16 HELIX 80 80 ALA C 350 LEU C 361 1 12 HELIX 81 81 ALA C 397 ALA C 419 1 23 HELIX 82 82 PRO C 420 ILE C 426 5 7 HELIX 83 83 ASP C 428 GLN C 441 1 14 HELIX 84 84 ALA C 464 GLY C 478 1 15 HELIX 85 85 GLU C 508 ALA C 512 5 5 HELIX 86 86 ASN C 517 SER C 527 1 11 HELIX 87 87 ASP C 538 ARG C 542 5 5 HELIX 88 88 PHE C 546 GLY C 548 5 3 HELIX 89 89 LEU C 549 GLY C 559 1 11 HELIX 90 90 ILE C 563 GLY C 580 1 18 HELIX 91 91 SER C 582 ARG C 600 1 19 HELIX 92 92 THR C 615 ASP C 624 1 10 HELIX 93 93 PRO C 625 GLN C 629 5 5 HELIX 94 94 THR C 633 VAL C 637 5 5 HELIX 95 95 SER C 638 LEU C 645 1 8 HELIX 96 96 SER C 650 MET C 662 1 13 SHEET 1 AA 6 ALA A 6 PRO A 8 0 SHEET 2 AA 6 THR A 377 LEU A 379 -1 O LEU A 378 N PHE A 7 SHEET 3 AA 6 VAL A 365 VAL A 367 -1 O VAL A 365 N LEU A 379 SHEET 4 AA 6 TYR A 199 GLN A 206 1 O TYR A 199 N TYR A 366 SHEET 5 AA 6 PHE A 265 GLY A 274 -1 O ARG A 268 N GLN A 206 SHEET 6 AA 6 HIS A 89 PRO A 94 1 N MET A 90 O PHE A 265 SHEET 1 AB 2 GLU A 38 TYR A 40 0 SHEET 2 AB 2 LEU A 43 LEU A 44 -1 O LEU A 43 N TYR A 40 SHEET 1 AC 2 LEU A 143 ARG A 146 0 SHEET 2 AC 2 MET A 646 VAL A 649 -1 O HIS A 647 N ILE A 145 SHEET 1 AD 2 ILE A 211 ASP A 214 0 SHEET 2 AD 2 LYS A 219 SER A 222 -1 O LYS A 219 N ASP A 214 SHEET 1 AE 2 MET A 226 ALA A 228 0 SHEET 2 AE 2 LEU A 242 ALA A 244 -1 O PHE A 243 N VAL A 227 SHEET 1 AF 4 ILE A 446 LYS A 451 0 SHEET 2 AF 4 ASP A 454 TRP A 459 -1 O ASP A 454 N LYS A 451 SHEET 3 AF 4 LEU A 319 VAL A 325 -1 O LEU A 319 N TRP A 459 SHEET 4 AF 4 ILE A 488 TYR A 490 -1 O SER A 489 N ASP A 324 SHEET 1 AG 3 ALA A 495 PHE A 496 0 SHEET 2 AG 3 ASP A 499 LEU A 502 -1 O ASP A 499 N PHE A 496 SHEET 3 AG 3 ILE A 513 GLY A 516 -1 O ILE A 513 N LEU A 502 SHEET 1 BA 6 ALA B 6 PRO B 8 0 SHEET 2 BA 6 THR B 377 LEU B 379 -1 O LEU B 378 N PHE B 7 SHEET 3 BA 6 VAL B 365 VAL B 367 -1 O VAL B 365 N LEU B 379 SHEET 4 BA 6 TYR B 199 GLN B 206 1 O TYR B 199 N TYR B 366 SHEET 5 BA 6 PHE B 265 GLY B 274 -1 O ARG B 268 N GLN B 206 SHEET 6 BA 6 HIS B 89 PRO B 94 1 N MET B 90 O PHE B 265 SHEET 1 BB 2 GLU B 38 TYR B 40 0 SHEET 2 BB 2 LEU B 43 LEU B 44 -1 O LEU B 43 N TYR B 40 SHEET 1 BC 2 LEU B 143 ARG B 146 0 SHEET 2 BC 2 MET B 646 VAL B 649 -1 O HIS B 647 N ILE B 145 SHEET 1 BD 2 ILE B 211 ASP B 214 0 SHEET 2 BD 2 LYS B 219 SER B 222 -1 O LYS B 219 N ASP B 214 SHEET 1 BE 2 MET B 226 ALA B 228 0 SHEET 2 BE 2 LEU B 242 ALA B 244 -1 O PHE B 243 N VAL B 227 SHEET 1 BF 4 ILE B 446 LYS B 451 0 SHEET 2 BF 4 ASP B 454 TRP B 459 -1 O ASP B 454 N LYS B 451 SHEET 3 BF 4 LEU B 319 VAL B 325 -1 O LEU B 319 N TRP B 459 SHEET 4 BF 4 ILE B 488 TYR B 490 -1 O SER B 489 N ASP B 324 SHEET 1 BG 3 ALA B 495 PHE B 496 0 SHEET 2 BG 3 ASP B 499 LEU B 502 -1 O ASP B 499 N PHE B 496 SHEET 3 BG 3 ILE B 513 GLY B 516 -1 O ILE B 513 N LEU B 502 SHEET 1 CA 6 ALA C 6 PRO C 8 0 SHEET 2 CA 6 THR C 377 LEU C 379 -1 O LEU C 378 N PHE C 7 SHEET 3 CA 6 VAL C 365 VAL C 367 -1 O VAL C 365 N LEU C 379 SHEET 4 CA 6 TYR C 199 GLN C 206 1 O TYR C 199 N TYR C 366 SHEET 5 CA 6 PHE C 265 GLY C 274 -1 O ARG C 268 N GLN C 206 SHEET 6 CA 6 HIS C 89 PRO C 94 1 N MET C 90 O PHE C 265 SHEET 1 CB 2 GLU C 38 TYR C 40 0 SHEET 2 CB 2 LEU C 43 LEU C 44 -1 O LEU C 43 N TYR C 40 SHEET 1 CC 2 LEU C 143 ARG C 146 0 SHEET 2 CC 2 MET C 646 VAL C 649 -1 O HIS C 647 N ILE C 145 SHEET 1 CD 2 ILE C 211 ASP C 214 0 SHEET 2 CD 2 LYS C 219 SER C 222 -1 O LYS C 219 N ASP C 214 SHEET 1 CE 2 MET C 226 ALA C 228 0 SHEET 2 CE 2 LEU C 242 ALA C 244 -1 O PHE C 243 N VAL C 227 SHEET 1 CF 4 ILE C 446 LYS C 451 0 SHEET 2 CF 4 ASP C 454 TRP C 459 -1 O ASP C 454 N LYS C 451 SHEET 3 CF 4 LEU C 319 VAL C 325 -1 O LEU C 319 N TRP C 459 SHEET 4 CF 4 ILE C 488 TYR C 490 -1 O SER C 489 N ASP C 324 SHEET 1 CG 3 ALA C 495 PHE C 496 0 SHEET 2 CG 3 ASP C 499 LEU C 502 -1 O ASP C 499 N PHE C 496 SHEET 3 CG 3 ILE C 513 GLY C 516 -1 O ILE C 513 N LEU C 502 LINK OD1 ASP A 454 MN MN A 665 1555 1555 2.07 LINK OE1 GLU A 491 MN MN A 665 1555 1555 2.04 LINK O ALA A 495 MN MN A 665 1555 1555 2.19 LINK MN MN A 665 O HOH A2888 1555 1555 2.27 LINK MN MN A 665 O HOH A2889 1555 1555 2.25 LINK MN MN A 665 O HOH A2890 1555 1555 2.33 LINK OD1 ASP B 454 MN MN B 665 1555 1555 2.07 LINK OE1 GLU B 491 MN MN B 665 1555 1555 2.04 LINK O ALA B 495 MN MN B 665 1555 1555 2.19 LINK MN MN B 665 O HOH B2936 1555 1555 2.25 LINK MN MN B 665 O HOH B2937 1555 1555 2.34 LINK MN MN B 665 O HOH B2938 1555 1555 2.27 LINK OD1 ASP C 454 MN MN C 665 1555 1555 2.07 LINK OE1 GLU C 491 MN MN C 665 1555 1555 2.04 LINK O ALA C 495 MN MN C 665 1555 1555 2.19 LINK MN MN C 665 O HOH C2935 1555 1555 2.27 LINK MN MN C 665 O HOH C2936 1555 1555 2.25 LINK MN MN C 665 O HOH C2937 1555 1555 2.33 CISPEP 1 ILE A 96 PRO A 97 0 -0.44 CISPEP 2 ILE A 153 PRO A 154 0 -0.02 CISPEP 3 ILE B 96 PRO B 97 0 -0.41 CISPEP 4 ILE B 153 PRO B 154 0 -0.01 CISPEP 5 ILE C 96 PRO C 97 0 -0.45 CISPEP 6 ILE C 153 PRO C 154 0 0.03 SITE 1 AC1 6 ASP A 454 GLU A 491 ALA A 495 HOH A2888 SITE 2 AC1 6 HOH A2889 HOH A2890 SITE 1 AC2 6 ASP B 454 GLU B 491 ALA B 495 HOH B2936 SITE 2 AC2 6 HOH B2937 HOH B2938 SITE 1 AC3 6 ASP C 454 GLU C 491 ALA C 495 HOH C2935 SITE 2 AC3 6 HOH C2936 HOH C2937 CRYST1 105.408 93.364 141.199 90.00 101.25 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009487 0.000000 0.001887 0.00000 SCALE2 0.000000 0.010711 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007221 0.00000 MTRIX1 1 0.139790 -0.722820 -0.676750 76.58470 1 MTRIX2 1 -0.794140 -0.490080 0.359400 17.67950 1 MTRIX3 1 -0.591440 0.487200 -0.642530 80.20420 1 MTRIX1 2 -0.171160 -0.753280 0.635030 -59.29010 1 MTRIX2 2 0.780560 -0.496980 -0.379130 6.14950 1 MTRIX3 2 0.601190 0.430790 0.673050 -28.40860 1