HEADER DE NOVO PROTEIN 18-DEC-00 1HQJ TITLE CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZJU-GLU-LEU-GLU-ALA-ARG-ILE-ARG-GLU-LEU-GLU-ALA-ARG-ILE- COMPND 3 LYS-NH2; COMPND 4 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 OTHER_DETAILS: NEOSYSTEM KEYWDS COILED COIL, DE NOVO DESIGN, ALPHA-HELIX, TRIMER, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.BURKHARD,M.MEIER,A.LUSTIG REVDAT 7 24-APR-24 1HQJ 1 COMPND SOURCE REMARK DBREF REVDAT 7 2 1 SEQRES HET HETNAM HETSYN REVDAT 7 3 1 FORMUL HELIX LINK SITE REVDAT 7 4 1 ATOM REVDAT 6 24-JUL-19 1HQJ 1 COMPND REMARK LINK REVDAT 5 10-OCT-18 1HQJ 1 COMPND SOURCE REVDAT 4 03-OCT-18 1HQJ 1 REMARK REVDAT 3 04-OCT-17 1HQJ 1 REMARK REVDAT 2 24-FEB-09 1HQJ 1 VERSN REVDAT 1 14-MAR-01 1HQJ 0 JRNL AUTH P.BURKHARD,M.MEIER,A.LUSTIG JRNL TITL DESIGN OF A MINIMAL PROTEIN OLIGOMERIZATION DOMAIN BY A JRNL TITL 2 STRUCTURAL APPROACH. JRNL REF PROTEIN SCI. V. 9 2294 2000 JRNL REFN ISSN 0961-8368 JRNL PMID 11206050 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.170 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 4131 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.166 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 5 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 3493 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1634 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 147 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 1815.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 1384.0 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 1 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 1680 REMARK 3 NUMBER OF RESTRAINTS : 2133 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 ANGLE DISTANCES (A) : 0.900 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1000012520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : WIGGLER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.58000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM ACETATE, PH REMARK 280 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.16700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.52150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.43700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.52150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.16700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.43700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE PEPTIDE IS A TRIMER AT HIGH IONIC STRENGTH REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -44.33400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 6 CD NE CZ NH1 NH2 REMARK 470 ARG D 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG H 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG I 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG J 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG K 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 6 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU H 3 PB PB H 2008 1.50 REMARK 500 CD GLU H 3 PB PB H 2008 1.65 REMARK 500 O2 ZJU H 2 CG GLU H 3 1.66 REMARK 500 OE1 GLU H 3 PB PB H 2008 1.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 14 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG G 14 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB K2005 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ZJU A 2 O1 REMARK 620 2 HOH A2008 O 63.6 REMARK 620 3 LYS K 16 NZ 102.1 67.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB L2009 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 5 OE1 REMARK 620 2 GLU L 3 OE2 156.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB A2003 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 10 OE2 REMARK 620 2 HOH C1007 O 161.4 REMARK 620 3 HOH C1011 O 144.0 54.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB E2007 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 10 OE1 REMARK 620 2 GLU E 10 OE2 57.9 REMARK 620 3 HOH E2019 O 92.7 59.2 REMARK 620 4 ZJU H 2 OD1 135.7 164.7 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB H2008 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU F 10 OE1 REMARK 620 2 ZJU H 2 O1 72.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB G2001 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH G2008 O REMARK 620 2 ZJU K 2 O1 86.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB I2006 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH H2013 O REMARK 620 2 HOH H2020 O 58.1 REMARK 620 3 GLU I 10 OE1 158.5 143.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 I 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB G 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB D 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB K 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB I 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB E 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB H 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB L 2009 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D7M RELATED DB: PDB REMARK 900 THE COILED-COIL TRIGGER SITE OF THE ROD DOMAIN OF CORTEXILLIN I REMARK 900 RELATED ID: 1GCM RELATED DB: PDB REMARK 900 CONTROL PROTEIN GCN4, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN; REMARK 900 ENGINEERED: YES; MUTATION: L5I, V9I, L12I, N16I, L19I, V23I, L26I, REMARK 900 V30I (I AT HEPTAD A POSITIONS, I AT HEPTAD D POSITIONS) DBREF 1HQJ A 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ B 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ C 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ D 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ E 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ F 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ G 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ H 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ I 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ J 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ K 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ L 2 16 PDB 1HQJ 1HQJ 2 16 SEQRES 1 A 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 A 15 ILE LYS SEQRES 1 B 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 B 15 ILE LYS SEQRES 1 C 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 C 15 ILE LYS SEQRES 1 D 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 D 15 ILE LYS SEQRES 1 E 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 E 15 ILE LYS SEQRES 1 F 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 F 15 ILE LYS SEQRES 1 G 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 G 15 ILE LYS SEQRES 1 H 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 H 15 ILE LYS SEQRES 1 I 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 I 15 ILE LYS SEQRES 1 J 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 J 15 ILE LYS SEQRES 1 K 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 K 15 ILE LYS SEQRES 1 L 15 ZJU GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 L 15 ILE LYS HET ZJU A 2 15 HET ZJU B 2 15 HET ZJU C 2 15 HET ZJU D 2 15 HET ZJU E 2 15 HET ZJU F 2 15 HET ZJU G 2 15 HET ZJU H 2 15 HET ZJU I 2 15 HET ZJU J 2 15 HET ZJU K 2 15 HET ZJU L 2 15 HET PB A2003 1 HET SO4 B1001 5 HET SO4 C1004 5 HET PB D2002 1 HET PB E2007 1 HET SO4 F1002 5 HET PB F2004 1 HET PB G2001 1 HET PB H2008 1 HET SO4 I1003 5 HET PB I2006 1 HET PB K2005 1 HET PB L2009 1 HETNAM ZJU N-SUCCINYL-ASPARTIC ACID HETNAM PB LEAD (II) ION HETNAM SO4 SULFATE ION HETSYN ZJU 2-[(4-OXIDANYL-4-OXIDANYLIDENE-BUTANOYL) HETSYN 2 ZJU AMINO]BUTANEDIOIC ACID FORMUL 1 ZJU 12(C8 H11 N O7) FORMUL 13 PB 9(PB 2+) FORMUL 14 SO4 4(O4 S 2-) FORMUL 26 HOH *147(H2 O) LINK C ZJU A 2 N GLU A 3 1555 1555 1.33 LINK C ZJU B 2 N GLU B 3 1555 1555 1.33 LINK C ZJU C 2 N GLU C 3 1555 1555 1.33 LINK C ZJU D 2 N GLU D 3 1555 1555 1.33 LINK C ZJU E 2 N GLU E 3 1555 1555 1.33 LINK C ZJU F 2 N GLU F 3 1555 1555 1.33 LINK C ZJU G 2 N GLU G 3 1555 1555 1.33 LINK C ZJU H 2 N GLU H 3 1555 1555 1.33 LINK C ZJU I 2 N GLU I 3 1555 1555 1.33 LINK C ZJU J 2 N GLU J 3 1555 1555 1.33 LINK C ZJU K 2 N GLU K 3 1555 1555 1.33 LINK C ZJU L 2 N GLU L 3 1555 1555 1.33 LINK O1 ZJU A 2 PB PB K2005 1555 1555 2.65 LINK OE1 GLU A 5 PB PB L2009 1555 1555 3.23 LINK OE2AGLU A 10 PB PB A2003 1555 1555 2.71 LINK PB PB A2003 O HOH C1007 1555 1555 2.99 LINK PB PB A2003 O HOH C1011 1555 1555 2.34 LINK O HOH A2008 PB PB K2005 1555 1555 2.50 LINK O1 ZJU D 2 PB PB D2002 1555 1555 2.15 LINK OE1 GLU E 10 PB PB E2007 1555 1555 2.25 LINK OE2 GLU E 10 PB PB E2007 1555 1555 2.28 LINK PB PB E2007 O HOH E2019 1555 1555 2.34 LINK PB PB E2007 OD1 ZJU H 2 1555 1555 2.31 LINK OD2 ZJU F 2 PB PB F2004 1555 1555 2.93 LINK OE1 GLU F 10 PB PB H2008 1555 4555 2.55 LINK PB PB G2001 O HOH G2008 1555 1555 2.81 LINK PB PB G2001 O1 ZJU K 2 1565 1555 2.29 LINK O1 ZJU H 2 PB PB H2008 1555 1555 2.46 LINK O HOH H2013 PB PB I2006 1555 1555 3.02 LINK O HOH H2020 PB PB I2006 1555 1555 2.54 LINK OE1BGLU I 10 PB PB I2006 1555 1555 2.80 LINK NZ LYS K 16 PB PB K2005 1555 1555 2.51 LINK OE2 GLU L 3 PB PB L2009 1555 1555 2.57 SITE 1 AC1 3 ARG B 14 ARG J 9 ARG K 7 SITE 1 AC2 5 ARG D 7 ARG F 9 ARG G 14 HOH G2008 SITE 2 AC2 5 LYS I 16 SITE 1 AC3 4 ARG H 9 ARG I 7 LYS K 16 ARG L 14 SITE 1 AC4 3 ARG A 7 ARG C 9 ARG E 14 SITE 1 AC5 2 HOH G2008 LEU K 4 SITE 1 AC6 1 LEU D 4 SITE 1 AC7 3 GLU A 10 HOH C1007 HOH C1011 SITE 1 AC9 2 HOH A2008 LYS K 16 SITE 1 BC1 3 HOH H2013 HOH H2020 GLU I 10 SITE 1 BC2 2 GLU E 10 HOH E2019 SITE 1 BC3 2 GLU F 10 GLU H 3 SITE 1 BC4 2 GLU A 5 GLU L 3 CRYST1 44.334 44.874 81.043 90.00 90.00 90.00 P 21 21 21 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022556 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012339 0.00000 HETATM 1 O1 ZJU A 2 20.004 31.615 10.887 1.00 33.29 O ANISOU 1 O1 ZJU A 2 4653 4735 3259 410 -280 150 O HETATM 2 C1 ZJU A 2 20.046 32.452 11.812 1.00 31.30 C ANISOU 2 C1 ZJU A 2 4172 4924 2795 1560 -113 267 C HETATM 3 O2 ZJU A 2 20.157 32.136 13.016 1.00 37.31 O ANISOU 3 O2 ZJU A 2 5693 5590 2896 3113 103 500 O HETATM 4 C2 ZJU A 2 19.957 33.923 11.459 1.00 28.54 C ANISOU 4 C2 ZJU A 2 3419 4815 2612 1124 -437 122 C HETATM 5 C3 ZJU A 2 19.475 34.776 12.635 1.00 25.37 C ANISOU 5 C3 ZJU A 2 2466 4617 2556 805 -216 356 C HETATM 6 C4 ZJU A 2 20.553 34.831 13.712 1.00 21.91 C ANISOU 6 C4 ZJU A 2 2040 3818 2469 539 48 457 C HETATM 7 O3 ZJU A 2 21.740 34.688 13.423 1.00 21.62 O ANISOU 7 O3 ZJU A 2 2167 3385 2662 767 194 374 O HETATM 8 N ZJU A 2 20.128 35.042 14.954 1.00 19.33 N ANISOU 8 N ZJU A 2 1832 2948 2566 397 10 190 N HETATM 9 CA ZJU A 2 21.066 35.309 16.039 1.00 21.42 C ANISOU 9 CA ZJU A 2 1716 3512 2910 633 -16 -493 C HETATM 10 CB ZJU A 2 20.313 35.670 17.321 1.00 25.61 C ANISOU 10 CB ZJU A 2 2519 4045 3167 857 91 -1145 C HETATM 11 CG ZJU A 2 19.626 37.018 17.229 1.00 30.02 C ANISOU 11 CG ZJU A 2 3207 4411 3789 1390 324 -1003 C HETATM 12 OD2 ZJU A 2 18.853 37.354 18.150 1.00 38.18 O ANISOU 12 OD2 ZJU A 2 4644 4898 4964 2149 1606 -492 O HETATM 13 OD1 ZJU A 2 19.858 37.742 16.238 1.00 36.52 O ANISOU 13 OD1 ZJU A 2 3427 6053 4396 3124 678 305 O HETATM 14 C ZJU A 2 21.980 34.113 16.279 1.00 18.90 C ANISOU 14 C ZJU A 2 1298 3376 2508 333 79 -237 C HETATM 15 O ZJU A 2 23.128 34.277 16.691 1.00 19.82 O ANISOU 15 O ZJU A 2 1086 3684 2761 362 382 -722 O