HEADER HYDROLASE 20-DEC-00 1HQX TITLE R308K ARGINASE VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.5.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BINUCLEAR MANGANESE CLUSTER, MUTAGENESIS, ARGINASE, SUBUNIT-SUBUNIT KEYWDS 2 INTERACTIONS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.T.LAVULO,T.M.SOSSONG JR.,M.R.BRIGHAM-BURKE,M.L.DOYLE,J.D.COX, AUTHOR 2 D.W.CHRISTIANSON,D.E.ASH REVDAT 7 29-MAY-24 1HQX 1 REMARK REVDAT 6 10-NOV-21 1HQX 1 REMARK SEQADV LINK REVDAT 5 23-OCT-19 1HQX 1 JRNL REVDAT 4 24-FEB-09 1HQX 1 VERSN REVDAT 3 01-APR-03 1HQX 1 JRNL REVDAT 2 31-DEC-02 1HQX 1 REMARK REVDAT 1 06-JUN-01 1HQX 0 JRNL AUTH L.T.LAVULO,T.M.SOSSONG JR.,M.R.BRIGHAM-BURKE,M.L.DOYLE, JRNL AUTH 2 J.D.COX,D.W.CHRISTIANSON,D.E.ASH JRNL TITL SUBUNIT-SUBUNIT INTERACTIONS IN TRIMERIC ARGINASE. JRNL TITL 2 GENERATION OF ACTIVE MONOMERS BY MUTATION OF A SINGLE AMINO JRNL TITL 3 ACID. JRNL REF J.BIOL.CHEM. V. 276 14242 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11278703 JRNL DOI 10.1074/JBC.M010575200 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 842 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7179 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1000012534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.946445 REMARK 200 MONOCHROMATOR : FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18649 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, BICINE, MANGANESE CHLORIDE, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.73333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.36667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 PRO A 5 REMARK 465 LYS A 320 REMARK 465 PRO A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 PRO B 5 REMARK 465 LYS B 320 REMARK 465 PRO B 321 REMARK 465 PRO B 322 REMARK 465 LYS B 323 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 PRO C 5 REMARK 465 LYS C 320 REMARK 465 PRO C 321 REMARK 465 PRO C 322 REMARK 465 LYS C 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 94 C VAL A 95 N 0.258 REMARK 500 GLY A 99 C ASP A 100 N -0.250 REMARK 500 HIS A 126 CA HIS A 126 CB -0.169 REMARK 500 SER B 94 C VAL B 95 N 0.257 REMARK 500 GLY B 99 C ASP B 100 N -0.251 REMARK 500 HIS B 126 CA HIS B 126 CB -0.170 REMARK 500 SER C 94 C VAL C 95 N 0.258 REMARK 500 GLY C 99 C ASP C 100 N -0.250 REMARK 500 HIS C 126 CA HIS C 126 CB -0.169 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 13 46.96 -141.80 REMARK 500 PRO A 14 73.01 -51.28 REMARK 500 SER A 16 10.97 -149.00 REMARK 500 ARG A 21 -148.24 -65.93 REMARK 500 ALA A 34 5.63 -66.05 REMARK 500 GLU A 44 36.58 -80.19 REMARK 500 VAL A 58 102.85 -49.86 REMARK 500 ASN A 60 62.42 70.17 REMARK 500 GLN A 65 -116.05 74.33 REMARK 500 VAL A 67 118.22 -39.78 REMARK 500 ASN A 90 30.96 -83.66 REMARK 500 HIS A 141 3.68 -64.33 REMARK 500 LYS A 155 12.08 -59.70 REMARK 500 PRO A 157 -179.46 -53.79 REMARK 500 PRO A 167 110.41 -32.07 REMARK 500 ALA A 171 -10.74 -45.39 REMARK 500 LEU A 179 131.54 -21.85 REMARK 500 ARG A 180 9.04 -162.74 REMARK 500 ASP A 181 72.53 -151.27 REMARK 500 ARG A 222 -84.30 -76.89 REMARK 500 THR A 241 55.09 -115.38 REMARK 500 ILE A 260 -70.85 -55.99 REMARK 500 GLU A 277 11.19 49.82 REMARK 500 THR A 292 -82.76 -48.64 REMARK 500 VAL A 293 -49.99 -28.17 REMARK 500 ALA B 13 46.96 -141.79 REMARK 500 PRO B 14 73.04 -51.33 REMARK 500 SER B 16 10.95 -149.03 REMARK 500 ARG B 21 -148.26 -65.92 REMARK 500 ALA B 34 5.61 -65.53 REMARK 500 GLU B 44 36.60 -80.21 REMARK 500 VAL B 58 102.85 -49.85 REMARK 500 ASN B 60 62.43 70.22 REMARK 500 GLN B 65 -116.04 74.35 REMARK 500 VAL B 67 118.20 -39.79 REMARK 500 ASN B 90 30.95 -83.65 REMARK 500 HIS B 141 3.65 -64.32 REMARK 500 LYS B 155 12.06 -59.71 REMARK 500 PRO B 157 -179.45 -53.79 REMARK 500 PRO B 167 110.39 -32.06 REMARK 500 ALA B 171 -10.76 -45.36 REMARK 500 LEU B 179 131.58 -21.88 REMARK 500 ARG B 180 9.07 -162.78 REMARK 500 ASP B 181 72.51 -151.29 REMARK 500 ARG B 222 -84.31 -76.88 REMARK 500 THR B 241 55.13 -115.36 REMARK 500 ILE B 260 -70.89 -55.96 REMARK 500 GLU B 277 11.20 49.84 REMARK 500 THR B 292 -82.76 -48.70 REMARK 500 VAL B 293 -49.96 -28.13 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 101 ND1 REMARK 620 2 ASP A 124 OD2 84.9 REMARK 620 3 ASP A 128 OD2 97.9 68.5 REMARK 620 4 ASP A 232 OD2 89.7 76.7 143.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 124 OD1 REMARK 620 2 HIS A 126 ND1 76.9 REMARK 620 3 ASP A 232 OD2 76.1 153.0 REMARK 620 4 ASP A 234 OD1 66.2 83.1 84.9 REMARK 620 5 ASP A 234 OD2 112.3 113.8 75.7 51.0 REMARK 620 6 HOH A 601 O 142.1 99.2 102.9 151.5 103.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 101 ND1 REMARK 620 2 ASP B 124 OD2 84.9 REMARK 620 3 ASP B 128 OD2 97.9 68.5 REMARK 620 4 ASP B 232 OD2 89.7 76.7 143.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD1 REMARK 620 2 HIS B 126 ND1 77.0 REMARK 620 3 ASP B 232 OD2 76.1 153.0 REMARK 620 4 ASP B 234 OD1 66.2 83.0 84.9 REMARK 620 5 ASP B 234 OD2 112.3 113.8 75.7 51.0 REMARK 620 6 HOH B 611 O 142.1 99.2 102.9 151.5 103.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 504 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 101 ND1 REMARK 620 2 ASP C 124 OD2 84.9 REMARK 620 3 ASP C 128 OD2 97.9 68.5 REMARK 620 4 ASP C 232 OD2 89.7 76.7 143.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 505 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 124 OD1 REMARK 620 2 HIS C 126 ND1 77.0 REMARK 620 3 ASP C 232 OD2 76.1 153.1 REMARK 620 4 ASP C 234 OD1 66.3 83.1 84.9 REMARK 620 5 ASP C 234 OD2 112.3 113.8 75.7 51.0 REMARK 620 6 HOH C 620 O 142.1 99.2 102.9 151.5 103.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RLA RELATED DB: PDB REMARK 900 1RLA CONTAINS NATIVE ARGINASE. DBREF 1HQX A 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQX B 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQX C 1 323 UNP P07824 ARGI1_RAT 1 323 SEQADV 1HQX LYS A 308 UNP P07824 ARG 308 ENGINEERED MUTATION SEQADV 1HQX LYS B 308 UNP P07824 ARG 308 ENGINEERED MUTATION SEQADV 1HQX LYS C 308 UNP P07824 ARG 308 ENGINEERED MUTATION SEQRES 1 A 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 A 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 A 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 A 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 A 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 A 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 A 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 A 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 A 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 A 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 A 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 A 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 A 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 A 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 A 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 A 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 A 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 A 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 A 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 A 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 A 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 A 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 A 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 A 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 A 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 B 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 B 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 B 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 B 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 B 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 B 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 B 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 B 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 B 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 B 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 B 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 B 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 B 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 B 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 B 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 B 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 B 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 B 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 B 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 B 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 B 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 B 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 B 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 B 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 B 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 C 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 C 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 C 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 C 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 C 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 C 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 C 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 C 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 C 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 C 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 C 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 C 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 C 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 C 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 C 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 C 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 C 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 C 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 C 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 C 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 C 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 C 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 C 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 C 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 C 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS HET MN A 500 1 HET MN A 501 1 HET MN B 502 1 HET MN B 503 1 HET MN C 504 1 HET MN C 505 1 HETNAM MN MANGANESE (II) ION FORMUL 4 MN 6(MN 2+) FORMUL 10 HOH *29(H2 O) HELIX 1 1 GLY A 23 GLU A 25 5 3 HELIX 2 2 LYS A 26 ALA A 34 1 9 HELIX 3 3 GLY A 35 GLU A 42 1 8 HELIX 4 4 ASN A 69 ASN A 90 1 22 HELIX 5 5 ASP A 100 SER A 102 5 3 HELIX 6 6 MET A 103 HIS A 115 1 13 HELIX 7 7 ASN A 139 GLY A 142 5 4 HELIX 8 8 GLN A 143 LEU A 149 1 7 HELIX 9 9 ASP A 183 LEU A 193 1 11 HELIX 10 10 MET A 200 GLY A 207 1 8 HELIX 11 11 GLY A 207 GLY A 221 1 15 HELIX 12 12 SER A 253 GLY A 268 1 16 HELIX 13 13 THR A 285 PHE A 304 1 20 HELIX 14 14 GLY B 23 GLU B 25 5 3 HELIX 15 15 LYS B 26 ALA B 34 1 9 HELIX 16 16 GLY B 35 GLU B 42 1 8 HELIX 17 17 ASN B 69 ASN B 90 1 22 HELIX 18 18 ASP B 100 SER B 102 5 3 HELIX 19 19 MET B 103 HIS B 115 1 13 HELIX 20 20 ASN B 139 GLY B 142 5 4 HELIX 21 21 GLN B 143 LEU B 149 1 7 HELIX 22 22 ASP B 183 LEU B 193 1 11 HELIX 23 23 MET B 200 GLY B 207 1 8 HELIX 24 24 GLY B 207 GLY B 221 1 15 HELIX 25 25 SER B 253 GLY B 268 1 16 HELIX 26 26 THR B 285 PHE B 304 1 20 HELIX 27 27 GLY C 23 GLU C 25 5 3 HELIX 28 28 LYS C 26 ALA C 34 1 9 HELIX 29 29 GLY C 35 GLU C 42 1 8 HELIX 30 30 ASN C 69 ASN C 90 1 22 HELIX 31 31 ASP C 100 SER C 102 5 3 HELIX 32 32 MET C 103 HIS C 115 1 13 HELIX 33 33 ASN C 139 GLY C 142 5 4 HELIX 34 34 GLN C 143 LEU C 149 1 7 HELIX 35 35 ASP C 183 LEU C 193 1 11 HELIX 36 36 MET C 200 GLY C 207 1 8 HELIX 37 37 GLY C 207 GLY C 221 1 15 HELIX 38 38 SER C 253 GLY C 268 1 16 HELIX 39 39 THR C 285 PHE C 304 1 20 SHEET 1 A 8 ASN A 46 ASP A 52 0 SHEET 2 A 8 PRO A 7 ALA A 13 1 N ILE A 8 O ASN A 46 SHEET 3 A 8 ILE A 93 GLY A 98 1 N ILE A 93 O PRO A 7 SHEET 4 A 8 LEU A 270 MET A 276 1 O SER A 271 N SER A 94 SHEET 5 A 8 ILE A 227 ASP A 232 1 O ILE A 227 N SER A 271 SHEET 6 A 8 CYS A 119 VAL A 123 1 O CYS A 119 N HIS A 228 SHEET 7 A 8 ILE A 174 GLY A 178 1 O VAL A 175 N TRP A 122 SHEET 8 A 8 LYS A 196 SER A 199 1 O LYS A 196 N TYR A 176 SHEET 1 B 8 ASN B 46 ASP B 52 0 SHEET 2 B 8 PRO B 7 ALA B 13 1 N ILE B 8 O ASN B 46 SHEET 3 B 8 ILE B 93 GLY B 98 1 N ILE B 93 O PRO B 7 SHEET 4 B 8 LEU B 270 MET B 276 1 O SER B 271 N SER B 94 SHEET 5 B 8 ILE B 227 ASP B 232 1 O ILE B 227 N SER B 271 SHEET 6 B 8 CYS B 119 VAL B 123 1 O CYS B 119 N HIS B 228 SHEET 7 B 8 ILE B 174 GLY B 178 1 O VAL B 175 N TRP B 122 SHEET 8 B 8 LYS B 196 SER B 199 1 O LYS B 196 N TYR B 176 SHEET 1 C 8 ASN C 46 ASP C 52 0 SHEET 2 C 8 PRO C 7 ALA C 13 1 N ILE C 8 O ASN C 46 SHEET 3 C 8 ILE C 93 GLY C 98 1 N ILE C 93 O PRO C 7 SHEET 4 C 8 LEU C 270 MET C 276 1 O SER C 271 N SER C 94 SHEET 5 C 8 ILE C 227 ASP C 232 1 O ILE C 227 N SER C 271 SHEET 6 C 8 CYS C 119 VAL C 123 1 O CYS C 119 N HIS C 228 SHEET 7 C 8 ILE C 174 GLY C 178 1 O VAL C 175 N TRP C 122 SHEET 8 C 8 LYS C 196 SER C 199 1 O LYS C 196 N TYR C 176 LINK ND1 HIS A 101 MN MN A 500 1555 1555 2.42 LINK OD2 ASP A 124 MN MN A 500 1555 1555 2.25 LINK OD1 ASP A 124 MN MN A 501 1555 1555 2.23 LINK ND1 HIS A 126 MN MN A 501 1555 1555 1.95 LINK OD2 ASP A 128 MN MN A 500 1555 1555 1.90 LINK OD2 ASP A 232 MN MN A 500 1555 1555 2.07 LINK OD2 ASP A 232 MN MN A 501 1555 1555 2.41 LINK OD1 ASP A 234 MN MN A 501 1555 1555 2.73 LINK OD2 ASP A 234 MN MN A 501 1555 1555 2.35 LINK MN MN A 501 O HOH A 601 1555 1555 2.68 LINK ND1 HIS B 101 MN MN B 502 1555 1555 2.42 LINK OD2 ASP B 124 MN MN B 502 1555 1555 2.25 LINK OD1 ASP B 124 MN MN B 503 1555 1555 2.23 LINK ND1 HIS B 126 MN MN B 503 1555 1555 1.95 LINK OD2 ASP B 128 MN MN B 502 1555 1555 1.90 LINK OD2 ASP B 232 MN MN B 502 1555 1555 2.07 LINK OD2 ASP B 232 MN MN B 503 1555 1555 2.41 LINK OD1 ASP B 234 MN MN B 503 1555 1555 2.73 LINK OD2 ASP B 234 MN MN B 503 1555 1555 2.35 LINK MN MN B 503 O HOH B 611 1555 1555 2.68 LINK ND1 HIS C 101 MN MN C 504 1555 1555 2.42 LINK OD2 ASP C 124 MN MN C 504 1555 1555 2.25 LINK OD1 ASP C 124 MN MN C 505 1555 1555 2.23 LINK ND1 HIS C 126 MN MN C 505 1555 1555 1.95 LINK OD2 ASP C 128 MN MN C 504 1555 1555 1.90 LINK OD2 ASP C 232 MN MN C 504 1555 1555 2.07 LINK OD2 ASP C 232 MN MN C 505 1555 1555 2.41 LINK OD1 ASP C 234 MN MN C 505 1555 1555 2.73 LINK OD2 ASP C 234 MN MN C 505 1555 1555 2.35 LINK MN MN C 505 O HOH C 620 1555 1555 2.68 CISPEP 1 GLY A 98 GLY A 99 0 -0.07 CISPEP 2 GLY B 98 GLY B 99 0 -0.10 CISPEP 3 GLY C 98 GLY C 99 0 -0.03 SITE 1 AC1 5 HIS A 101 ASP A 124 ASP A 128 ASP A 232 SITE 2 AC1 5 MN A 501 SITE 1 AC2 7 ASP A 124 HIS A 126 ASP A 232 ASP A 234 SITE 2 AC2 7 THR A 246 MN A 500 HOH A 601 SITE 1 AC3 5 HIS B 101 ASP B 124 ASP B 128 ASP B 232 SITE 2 AC3 5 MN B 503 SITE 1 AC4 7 ASP B 124 HIS B 126 ASP B 232 ASP B 234 SITE 2 AC4 7 THR B 246 MN B 502 HOH B 611 SITE 1 AC5 5 HIS C 101 ASP C 124 ASP C 128 ASP C 232 SITE 2 AC5 5 MN C 505 SITE 1 AC6 7 ASP C 124 HIS C 126 ASP C 232 ASP C 234 SITE 2 AC6 7 THR C 246 MN C 504 HOH C 620 CRYST1 87.860 87.860 112.100 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011382 0.006571 0.000000 0.00000 SCALE2 0.000000 0.013143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008921 0.00000