HEADER PROTEIN BINDING 23-JAN-01 1HZ5 TITLE CRYSTAL STRUCTURES OF THE B1 DOMAIN OF PROTEIN L FROM TITLE 2 PEPTOSTREPTOCOCCUS MAGNUS, WITH A TYROSINE TO TRYPTOPHAN SUBSTITUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN L; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: B1 DOMAIN; COMPND 5 SYNONYM: IG KAPPA LIGHT CHAIN-BINDING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FINEGOLDIA MAGNA; SOURCE 3 ORGANISM_TAXID: 334413; SOURCE 4 STRAIN: ATCC 29328; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS FOUR STRANDED BETA-SHEET WITH CENTRAL ALPHA HELIX, BINDS KAPPA LIGHT KEYWDS 2 CHAIN OF IMMUNOGLOBULINS, ZINC COORDINATED HISTAG, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.W.O'NEILL,D.E.KIM,D.BAKER,K.Y.J.ZHANG REVDAT 6 09-AUG-23 1HZ5 1 REMARK REVDAT 5 27-OCT-21 1HZ5 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1HZ5 1 VERSN REVDAT 3 24-FEB-09 1HZ5 1 VERSN REVDAT 2 01-APR-03 1HZ5 1 JRNL REVDAT 1 04-APR-01 1HZ5 0 JRNL AUTH J.W.O'NEILL,D.E.KIM,D.BAKER,K.Y.ZHANG JRNL TITL STRUCTURES OF THE B1 DOMAIN OF PROTEIN L FROM JRNL TITL 2 PEPTOSTREPTOCOCCUS MAGNUS WITH A TYROSINE TO TRYPTOPHAN JRNL TITL 3 SUBSTITUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 480 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11264576 JRNL DOI 10.1107/S0907444901000373 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1095659.710 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1341 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4119 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE : 0.2330 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 201 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1132 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 237 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : 0.61000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.07 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.11 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.690 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.720 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.430 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.330 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 42.96 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HZ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1000012704. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26449 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : 0.26300 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: CRYSTAL STRUCTURE OF B1 DOMAIN (Y47W), NON -HIS REMARK 200 -TAG COORDINATE STRUCTURE (SEE 1HZ6) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M ZINC ACCETATE AND MES, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.78733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.39367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.39367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 72.78733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -182.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 33.21850 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 57.53613 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.78733 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 104 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -6 NE2 REMARK 620 2 HOH A 173 O 107.7 REMARK 620 3 HIS B -6 NE2 101.9 106.0 REMARK 620 4 HOH B 182 O 113.3 115.0 112.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -5 NE2 REMARK 620 2 HIS A -3 NE2 102.3 REMARK 620 3 GLU A 46 OE1 108.1 115.4 REMARK 620 4 HIS B -1 NE2 124.8 106.7 100.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 103 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -4 NE2 REMARK 620 2 HIS A -2 ND1 124.8 REMARK 620 3 GLU A 2 OE2 104.7 107.4 REMARK 620 4 GLU A 27 OE1 128.6 94.4 91.0 REMARK 620 5 GLU A 27 OE2 83.7 100.6 137.4 54.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 108 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -2 NE2 REMARK 620 2 ASP B 38 OD2 112.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -1 NE2 REMARK 620 2 HIS B -5 NE2 114.6 REMARK 620 3 HIS B -3 NE2 105.5 105.0 REMARK 620 4 GLU B 46 OE1 100.9 117.2 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 109 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 21 OE2 REMARK 620 2 HOH A 178 O 129.9 REMARK 620 3 HOH A 201 O 70.0 104.5 REMARK 620 4 GLU B 21 OE2 116.4 109.3 119.4 REMARK 620 5 GLU B 21 OE1 137.6 86.4 81.2 53.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 107 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 38 OD2 REMARK 620 2 HIS B -2 NE2 119.2 REMARK 620 3 HOH B 208 O 105.5 122.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 106 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 43 OD1 REMARK 620 2 HOH A 190 O 87.2 REMARK 620 3 HOH A 191 O 100.8 87.2 REMARK 620 4 HOH A 204 O 91.1 171.5 101.3 REMARK 620 5 ASP B 43 OD2 128.7 79.9 127.5 94.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 105 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B -4 NE2 REMARK 620 2 HIS B -2 ND1 125.2 REMARK 620 3 GLU B 2 OE2 106.1 104.5 REMARK 620 4 GLU B 27 OE1 125.1 96.3 94.2 REMARK 620 5 GLU B 27 OE2 82.5 101.9 139.3 52.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 110 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 3 OE2 REMARK 620 2 HOH B 195 O 90.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 110 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HZ6 RELATED DB: PDB REMARK 900 1HZ6 IS PROTEIN L B1 DOMAIN (Y47W) WITH NO ZINC COORDINATION REMARK 900 RELATED ID: 2PTL RELATED DB: PDB REMARK 900 2PTL IS NMR DERIVED B1 DOMAIN OF PROTEIN L DBREF 1HZ5 A 2 64 UNP Q51912 Q51912_PEPMA 111 173 DBREF 1HZ5 B 2 64 UNP Q51912 Q51912_PEPMA 111 173 SEQADV 1HZ5 MET A -7 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -6 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -5 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -4 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -3 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -2 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS A -1 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 ALA A 0 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 MET A 1 UNP Q51912 CLONING ARTIFACT SEQADV 1HZ5 TRP A 47 UNP Q51912 TYR 156 ENGINEERED MUTATION SEQADV 1HZ5 MET B -7 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -6 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -5 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -4 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -3 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -2 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 HIS B -1 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 ALA B 0 UNP Q51912 EXPRESSION TAG SEQADV 1HZ5 MET B 1 UNP Q51912 CLONING ARTIFACT SEQADV 1HZ5 TRP B 47 UNP Q51912 TYR 156 ENGINEERED MUTATION SEQRES 1 A 72 MET HIS HIS HIS HIS HIS HIS ALA MET GLU GLU VAL THR SEQRES 2 A 72 ILE LYS ALA ASN LEU ILE PHE ALA ASN GLY SER THR GLN SEQRES 3 A 72 THR ALA GLU PHE LYS GLY THR PHE GLU LYS ALA THR SER SEQRES 4 A 72 GLU ALA TYR ALA TYR ALA ASP THR LEU LYS LYS ASP ASN SEQRES 5 A 72 GLY GLU TRP THR VAL ASP VAL ALA ASP LYS GLY TYR THR SEQRES 6 A 72 LEU ASN ILE LYS PHE ALA GLY SEQRES 1 B 72 MET HIS HIS HIS HIS HIS HIS ALA MET GLU GLU VAL THR SEQRES 2 B 72 ILE LYS ALA ASN LEU ILE PHE ALA ASN GLY SER THR GLN SEQRES 3 B 72 THR ALA GLU PHE LYS GLY THR PHE GLU LYS ALA THR SER SEQRES 4 B 72 GLU ALA TYR ALA TYR ALA ASP THR LEU LYS LYS ASP ASN SEQRES 5 B 72 GLY GLU TRP THR VAL ASP VAL ALA ASP LYS GLY TYR THR SEQRES 6 B 72 LEU ASN ILE LYS PHE ALA GLY HET ZN A 101 1 HET ZN A 102 1 HET ZN A 103 1 HET ZN A 104 1 HET ZN A 106 1 HET ZN A 108 1 HET ZN B 105 1 HET ZN B 107 1 HET ZN B 109 1 HET ZN B 110 1 HETNAM ZN ZINC ION FORMUL 3 ZN 10(ZN 2+) FORMUL 13 HOH *237(H2 O) HELIX 1 1 THR A 25 GLY A 45 1 21 HELIX 2 2 ASP A 53 GLY A 55 5 3 HELIX 3 3 THR B 25 GLY B 45 1 21 HELIX 4 4 ASP B 53 GLY B 55 5 3 SHEET 1 A 4 THR A 17 GLY A 24 0 SHEET 2 A 4 VAL A 4 ILE A 11 -1 N VAL A 4 O GLY A 24 SHEET 3 A 4 THR A 57 PHE A 62 1 N LEU A 58 O LYS A 7 SHEET 4 A 4 TRP A 47 ALA A 52 -1 O THR A 48 N LYS A 61 SHEET 1 B 4 THR B 17 GLY B 24 0 SHEET 2 B 4 VAL B 4 ILE B 11 -1 N VAL B 4 O GLY B 24 SHEET 3 B 4 THR B 57 PHE B 62 1 N LEU B 58 O LYS B 7 SHEET 4 B 4 TRP B 47 ALA B 52 -1 O THR B 48 N LYS B 61 LINK NE2 HIS A -6 ZN ZN A 104 1555 1555 2.24 LINK NE2 HIS A -5 ZN ZN A 101 1555 1555 1.99 LINK NE2 HIS A -4 ZN ZN A 103 1555 1555 2.12 LINK NE2 HIS A -3 ZN ZN A 101 1555 1555 1.99 LINK ND1 HIS A -2 ZN ZN A 103 1555 1555 2.04 LINK NE2 HIS A -2 ZN ZN A 108 1555 1555 2.29 LINK NE2 HIS A -1 ZN ZN A 102 1555 1555 2.04 LINK OE2 GLU A 2 ZN ZN A 103 1555 1555 2.07 LINK OE2 GLU A 21 ZN ZN B 109 5665 1555 2.58 LINK OE1 GLU A 27 ZN ZN A 103 1555 1555 2.20 LINK OE2 GLU A 27 ZN ZN A 103 1555 1555 2.51 LINK OD2 ASP A 38 ZN ZN B 107 6655 1555 2.39 LINK OD1 ASP A 43 ZN ZN A 106 1555 1555 2.13 LINK OE1 GLU A 46 ZN ZN A 101 6665 1555 2.12 LINK ZN ZN A 101 NE2 HIS B -1 1555 1565 2.09 LINK ZN ZN A 102 NE2 HIS B -5 1555 1565 2.10 LINK ZN ZN A 102 NE2 HIS B -3 1555 1565 2.05 LINK ZN ZN A 102 OE1 GLU B 46 1555 6665 2.03 LINK ZN ZN A 104 O HOH A 173 1555 1555 2.42 LINK ZN ZN A 104 NE2 HIS B -6 1555 6665 2.21 LINK ZN ZN A 104 O HOH B 182 1555 6665 2.21 LINK ZN ZN A 106 O HOH A 190 1555 1555 2.29 LINK ZN ZN A 106 O HOH A 191 1555 1555 2.36 LINK ZN ZN A 106 O HOH A 204 1555 1555 2.35 LINK ZN ZN A 106 OD2 ASP B 43 1555 5565 2.10 LINK ZN ZN A 108 OD2 ASP B 38 1555 6665 2.35 LINK O HOH A 178 ZN ZN B 109 5665 1555 2.59 LINK O HOH A 201 ZN ZN B 109 5665 1555 2.40 LINK NE2 HIS B -4 ZN ZN B 105 1555 1555 2.11 LINK ND1 HIS B -2 ZN ZN B 105 1555 1555 2.05 LINK NE2 HIS B -2 ZN ZN B 107 1555 1555 2.23 LINK OE2 GLU B 2 ZN ZN B 105 1555 1555 2.04 LINK OE2 GLU B 3 ZN ZN B 110 1555 1555 2.30 LINK OE2 GLU B 21 ZN ZN B 109 1555 1555 2.37 LINK OE1 GLU B 21 ZN ZN B 109 1555 1555 2.53 LINK OE1 GLU B 27 ZN ZN B 105 1555 1555 2.13 LINK OE2 GLU B 27 ZN ZN B 105 1555 1555 2.71 LINK ZN ZN B 107 O HOH B 208 1555 1555 2.29 LINK ZN ZN B 110 O HOH B 195 1555 1555 2.43 SITE 1 AC1 4 HIS A -5 HIS A -3 GLU A 46 HIS B -1 SITE 1 AC2 4 HIS A -1 HIS B -5 HIS B -3 GLU B 46 SITE 1 AC3 4 HIS A -2 HIS A -4 GLU A 2 GLU A 27 SITE 1 AC4 4 HIS A -6 HOH A 173 HIS B -6 HOH B 182 SITE 1 AC5 4 HIS B -4 HIS B -2 GLU B 2 GLU B 27 SITE 1 AC6 5 ASP A 43 HOH A 190 HOH A 191 HOH A 204 SITE 2 AC6 5 ASP B 43 SITE 1 AC7 4 ASP A 38 HIS B -2 LYS B 28 HOH B 208 SITE 1 AC8 3 HIS A -2 HOH A 198 ASP B 38 SITE 1 AC9 4 GLU A 21 HOH A 178 HOH A 201 GLU B 21 SITE 1 BC1 2 GLU B 3 HOH B 195 CRYST1 66.437 66.437 109.181 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015052 0.008690 0.000000 0.00000 SCALE2 0.000000 0.017380 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009159 0.00000