data_1I0F # _entry.id 1I0F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I0F pdb_00001i0f 10.2210/pdb1i0f/pdb NDB AD0011 ? ? RCSB RCSB012750 ? ? WWPDB D_1000012750 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-04-04 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.conn_type_id' 19 4 'Structure model' '_struct_conn.id' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 1I0F _pdbx_database_status.recvd_initial_deposition_date 2001-01-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tereshko, V.' 1 'Wilds, C.J.' 2 'Minasov, G.' 3 'Prakash, T.P.' 4 'Maier, M.A.' 5 'Howard, A.' 6 'Wawrzak, Z.' 7 'Manoharan, M.' 8 'Egli, M.' 9 # _citation.id primary _citation.title 'Detection of alkali metal ions in DNA crystals using state-of-the-art X-ray diffraction experiments.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 29 _citation.page_first 1208 _citation.page_last 1215 _citation.year 2001 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11222771 _citation.pdbx_database_id_DOI 10.1093/nar/29.5.1208 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tereshko, V.' 1 ? primary 'Wilds, C.J.' 2 ? primary 'Minasov, G.' 3 ? primary 'Prakash, T.P.' 4 ? primary 'Maier, M.A.' 5 ? primary 'Howard, A.' 6 ? primary 'Wawrzak, Z.' 7 ? primary 'Manoharan, M.' 8 ? primary 'Egli, M.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*GP*TP*AP*(127)P*AP*CP*GP*C)-3'" 3120.072 2 ? ? ? ? 2 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ? 3 water nat water 18.015 113 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DT)(DA)(127)(DA)(DC)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCGTAUACGC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BARIUM ION' BA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 127 n 1 7 DA n 1 8 DC n 1 9 DG n 1 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 127 'RNA linking' n "2'-O-AMINOOXY-ETHYL-5-METHYL-URIDINE-5'-MONOPHOSPHATE" ? 'C12 H20 N3 O10 P' 397.275 BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 127 6 6 6 127 127 A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DC 10 10 10 DC C A . n B 1 1 DG 1 11 11 DG G B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DG 3 13 13 DG G B . n B 1 4 DT 4 14 14 DT T B . n B 1 5 DA 5 15 15 DA A B . n B 1 6 127 6 16 16 127 127 B . n B 1 7 DA 7 17 17 DA A B . n B 1 8 DC 8 18 18 DC C B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DC 10 20 20 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BA 1 22 22 BA BA A . D 3 HOH 1 102 102 HOH HOH A . D 3 HOH 2 104 104 HOH HOH A . D 3 HOH 3 105 105 HOH HOH A . D 3 HOH 4 106 106 HOH HOH A . D 3 HOH 5 108 108 HOH HOH A . D 3 HOH 6 109 109 HOH HOH A . D 3 HOH 7 112 112 HOH HOH A . D 3 HOH 8 114 114 HOH HOH A . D 3 HOH 9 116 116 HOH HOH A . D 3 HOH 10 117 117 HOH HOH A . D 3 HOH 11 118 118 HOH HOH A . D 3 HOH 12 119 119 HOH HOH A . D 3 HOH 13 120 120 HOH HOH A . D 3 HOH 14 122 122 HOH HOH A . D 3 HOH 15 123 123 HOH HOH A . D 3 HOH 16 124 124 HOH HOH A . D 3 HOH 17 125 125 HOH HOH A . D 3 HOH 18 130 130 HOH HOH A . D 3 HOH 19 131 131 HOH HOH A . D 3 HOH 20 132 132 HOH HOH A . D 3 HOH 21 133 133 HOH HOH A . D 3 HOH 22 139 139 HOH HOH A . D 3 HOH 23 140 140 HOH HOH A . D 3 HOH 24 142 142 HOH HOH A . D 3 HOH 25 143 143 HOH HOH A . D 3 HOH 26 145 145 HOH HOH A . D 3 HOH 27 150 150 HOH HOH A . D 3 HOH 28 152 152 HOH HOH A . D 3 HOH 29 154 154 HOH HOH A . D 3 HOH 30 159 159 HOH HOH A . D 3 HOH 31 160 160 HOH HOH A . D 3 HOH 32 164 164 HOH HOH A . D 3 HOH 33 168 168 HOH HOH A . D 3 HOH 34 169 169 HOH HOH A . D 3 HOH 35 170 170 HOH HOH A . D 3 HOH 36 171 171 HOH HOH A . D 3 HOH 37 172 172 HOH HOH A . D 3 HOH 38 173 173 HOH HOH A . D 3 HOH 39 174 174 HOH HOH A . D 3 HOH 40 175 175 HOH HOH A . D 3 HOH 41 176 176 HOH HOH A . D 3 HOH 42 177 177 HOH HOH A . D 3 HOH 43 178 178 HOH HOH A . D 3 HOH 44 180 180 HOH HOH A . D 3 HOH 45 181 181 HOH HOH A . D 3 HOH 46 182 182 HOH HOH A . D 3 HOH 47 183 183 HOH HOH A . D 3 HOH 48 186 186 HOH HOH A . D 3 HOH 49 188 188 HOH HOH A . D 3 HOH 50 189 189 HOH HOH A . D 3 HOH 51 190 190 HOH HOH A . D 3 HOH 52 196 196 HOH HOH A . D 3 HOH 53 198 198 HOH HOH A . D 3 HOH 54 201 201 HOH HOH A . D 3 HOH 55 203 203 HOH HOH A . D 3 HOH 56 211 211 HOH HOH A . E 3 HOH 1 101 101 HOH HOH B . E 3 HOH 2 103 103 HOH HOH B . E 3 HOH 3 107 107 HOH HOH B . E 3 HOH 4 110 110 HOH HOH B . E 3 HOH 5 111 111 HOH HOH B . E 3 HOH 6 113 113 HOH HOH B . E 3 HOH 7 115 115 HOH HOH B . E 3 HOH 8 121 121 HOH HOH B . E 3 HOH 9 126 126 HOH HOH B . E 3 HOH 10 127 127 HOH HOH B . E 3 HOH 11 128 128 HOH HOH B . E 3 HOH 12 129 129 HOH HOH B . E 3 HOH 13 134 134 HOH HOH B . E 3 HOH 14 135 135 HOH HOH B . E 3 HOH 15 136 136 HOH HOH B . E 3 HOH 16 137 137 HOH HOH B . E 3 HOH 17 138 138 HOH HOH B . E 3 HOH 18 141 141 HOH HOH B . E 3 HOH 19 144 144 HOH HOH B . E 3 HOH 20 146 146 HOH HOH B . E 3 HOH 21 147 147 HOH HOH B . E 3 HOH 22 148 148 HOH HOH B . E 3 HOH 23 149 149 HOH HOH B . E 3 HOH 24 151 151 HOH HOH B . E 3 HOH 25 153 153 HOH HOH B . E 3 HOH 26 155 155 HOH HOH B . E 3 HOH 27 156 156 HOH HOH B . E 3 HOH 28 157 157 HOH HOH B . E 3 HOH 29 158 158 HOH HOH B . E 3 HOH 30 161 161 HOH HOH B . E 3 HOH 31 162 162 HOH HOH B . E 3 HOH 32 163 163 HOH HOH B . E 3 HOH 33 165 165 HOH HOH B . E 3 HOH 34 166 166 HOH HOH B . E 3 HOH 35 167 167 HOH HOH B . E 3 HOH 36 179 179 HOH HOH B . E 3 HOH 37 184 184 HOH HOH B . E 3 HOH 38 185 185 HOH HOH B . E 3 HOH 39 187 187 HOH HOH B . E 3 HOH 40 191 191 HOH HOH B . E 3 HOH 41 192 192 HOH HOH B . E 3 HOH 42 193 193 HOH HOH B . E 3 HOH 43 194 194 HOH HOH B . E 3 HOH 44 195 195 HOH HOH B . E 3 HOH 45 197 197 HOH HOH B . E 3 HOH 46 199 199 HOH HOH B . E 3 HOH 47 200 200 HOH HOH B . E 3 HOH 48 202 202 HOH HOH B . E 3 HOH 49 204 204 HOH HOH B . E 3 HOH 50 205 205 HOH HOH B . E 3 HOH 51 206 206 HOH HOH B . E 3 HOH 52 207 207 HOH HOH B . E 3 HOH 53 208 208 HOH HOH B . E 3 HOH 54 209 209 HOH HOH B . E 3 HOH 55 210 210 HOH HOH B . E 3 HOH 56 212 212 HOH HOH B . E 3 HOH 57 213 213 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1I0F _cell.length_a 24.99 _cell.length_b 44.57 _cell.length_c 45.12 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I0F _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 # _exptl.entry_id 1I0F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 36.40 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'Ba salt, pH 6.0, VAPOR DIFFUSION, HANGING DROP at 298 K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1999-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1I0F _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.6 _reflns.number_obs 6913 _reflns.number_all 6913 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1I0F _refine.ls_number_reflns_obs 6913 _refine.ls_number_reflns_all 6913 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19 _refine.ls_R_factor_R_free 0.212 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 414 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 528 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 20 # _database_PDB_matrix.entry_id 1I0F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1I0F _struct.title ;1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-AMINOOXYETHYL THYMINE IN PLACE OF T6, BA-FORM ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I0F _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-form double helix, modified sugar, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1I0F _struct_ref.pdbx_db_accession 1I0F _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1I0F A 1 ? 10 ? 1I0F 1 ? 10 ? 1 10 2 1 1I0F B 1 ? 10 ? 1I0F 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 5 "O3'" ? ? ? 1_555 A 127 6 P ? ? A DA 5 A 127 6 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale2 covale both ? A 127 6 "O3'" ? ? ? 1_555 A DA 7 P ? ? A 127 6 A DA 7 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale3 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 127 6 P ? ? B DA 15 B 127 16 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale both ? B 127 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? B 127 16 B DA 17 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A DG 3 O6 ? ? ? 1_555 C BA . BA ? ? A DG 3 A BA 22 1_555 ? ? ? ? ? ? ? 2.752 ? ? metalc2 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 22 A HOH 118 1_555 ? ? ? ? ? ? ? 3.075 ? ? metalc3 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 22 A HOH 145 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc4 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 22 A HOH 171 1_555 ? ? ? ? ? ? ? 2.643 ? ? metalc5 metalc ? ? C BA . BA ? ? ? 1_555 D HOH . O ? ? A BA 22 A HOH 180 1_555 ? ? ? ? ? ? ? 3.539 ? ? metalc6 metalc ? ? C BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 22 B HOH 144 1_555 ? ? ? ? ? ? ? 2.588 ? ? metalc7 metalc ? ? C BA . BA ? ? ? 1_555 E HOH . O ? ? A BA 22 B HOH 213 1_555 ? ? ? ? ? ? ? 2.777 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B 127 6 N3 ? ? A DA 5 B 127 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B 127 6 O4 ? ? A DA 5 B 127 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A 127 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A 127 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A 127 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A 127 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 118 ? 1_555 74.1 ? 2 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 145 ? 1_555 93.7 ? 3 O ? D HOH . ? A HOH 118 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 145 ? 1_555 79.0 ? 4 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 171 ? 1_555 71.8 ? 5 O ? D HOH . ? A HOH 118 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 171 ? 1_555 141.8 ? 6 O ? D HOH . ? A HOH 145 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 171 ? 1_555 119.9 ? 7 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 180 ? 1_555 121.4 ? 8 O ? D HOH . ? A HOH 118 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 180 ? 1_555 144.3 ? 9 O ? D HOH . ? A HOH 145 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 180 ? 1_555 68.7 ? 10 O ? D HOH . ? A HOH 171 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? D HOH . ? A HOH 180 ? 1_555 71.0 ? 11 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 144 ? 1_555 83.3 ? 12 O ? D HOH . ? A HOH 118 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 144 ? 1_555 77.0 ? 13 O ? D HOH . ? A HOH 145 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 144 ? 1_555 155.6 ? 14 O ? D HOH . ? A HOH 171 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 144 ? 1_555 82.3 ? 15 O ? D HOH . ? A HOH 180 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 144 ? 1_555 132.9 ? 16 O6 ? A DG 3 ? A DG 3 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 140.5 ? 17 O ? D HOH . ? A HOH 118 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 115.4 ? 18 O ? D HOH . ? A HOH 145 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 125.4 ? 19 O ? D HOH . ? A HOH 171 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 82.2 ? 20 O ? D HOH . ? A HOH 180 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 74.6 ? 21 O ? E HOH . ? B HOH 144 ? 1_555 BA ? C BA . ? A BA 22 ? 1_555 O ? E HOH . ? B HOH 213 ? 1_555 63.7 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id BA _struct_site.pdbx_auth_seq_id 22 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE BA A 22' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 118 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 145 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 171 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH B 144 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH B 213 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 125 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 160 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 175 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 149 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 1.77 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 19 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 19 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP2 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 19 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 98.21 _pdbx_validate_rmsd_angle.angle_target_value 105.70 _pdbx_validate_rmsd_angle.angle_deviation -7.49 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 127 6 A 127 6 ? U ? 2 B 127 6 B 127 16 ? U ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 127 P P N N 1 127 OP1 O N N 2 127 OP2 O N N 3 127 OP3 O N N 4 127 "O5'" O N N 5 127 "C5'" C N N 6 127 "C4'" C N R 7 127 "O4'" O N N 8 127 "C3'" C N R 9 127 "O3'" O N N 10 127 "C2'" C N R 11 127 "O2'" O N N 12 127 "C1'" C N R 13 127 N1 N N N 14 127 C2 C N N 15 127 O2 O N N 16 127 N3 N N N 17 127 C4 C N N 18 127 O4 O N N 19 127 C5 C N N 20 127 C5M C N N 21 127 C6 C N N 22 127 "CA'" C N N 23 127 "CB'" C N N 24 127 "OC'" O N N 25 127 "ND'" N N N 26 127 HOP2 H N N 27 127 HOP3 H N N 28 127 "H5'" H N N 29 127 "H5''" H N N 30 127 "H4'" H N N 31 127 "H3'" H N N 32 127 "HO3'" H N N 33 127 "H2'" H N N 34 127 "H1'" H N N 35 127 H3 H N N 36 127 H71 H N N 37 127 H72 H N N 38 127 H73 H N N 39 127 H6 H N N 40 127 "HA'1" H N N 41 127 "HA'2" H N N 42 127 "HB'1" H N N 43 127 "HB'2" H N N 44 127 "HD'1" H N N 45 127 "HD'2" H N N 46 BA BA BA N N 47 DA OP3 O N N 48 DA P P N N 49 DA OP1 O N N 50 DA OP2 O N N 51 DA "O5'" O N N 52 DA "C5'" C N N 53 DA "C4'" C N R 54 DA "O4'" O N N 55 DA "C3'" C N S 56 DA "O3'" O N N 57 DA "C2'" C N N 58 DA "C1'" C N R 59 DA N9 N Y N 60 DA C8 C Y N 61 DA N7 N Y N 62 DA C5 C Y N 63 DA C6 C Y N 64 DA N6 N N N 65 DA N1 N Y N 66 DA C2 C Y N 67 DA N3 N Y N 68 DA C4 C Y N 69 DA HOP3 H N N 70 DA HOP2 H N N 71 DA "H5'" H N N 72 DA "H5''" H N N 73 DA "H4'" H N N 74 DA "H3'" H N N 75 DA "HO3'" H N N 76 DA "H2'" H N N 77 DA "H2''" H N N 78 DA "H1'" H N N 79 DA H8 H N N 80 DA H61 H N N 81 DA H62 H N N 82 DA H2 H N N 83 DC OP3 O N N 84 DC P P N N 85 DC OP1 O N N 86 DC OP2 O N N 87 DC "O5'" O N N 88 DC "C5'" C N N 89 DC "C4'" C N R 90 DC "O4'" O N N 91 DC "C3'" C N S 92 DC "O3'" O N N 93 DC "C2'" C N N 94 DC "C1'" C N R 95 DC N1 N N N 96 DC C2 C N N 97 DC O2 O N N 98 DC N3 N N N 99 DC C4 C N N 100 DC N4 N N N 101 DC C5 C N N 102 DC C6 C N N 103 DC HOP3 H N N 104 DC HOP2 H N N 105 DC "H5'" H N N 106 DC "H5''" H N N 107 DC "H4'" H N N 108 DC "H3'" H N N 109 DC "HO3'" H N N 110 DC "H2'" H N N 111 DC "H2''" H N N 112 DC "H1'" H N N 113 DC H41 H N N 114 DC H42 H N N 115 DC H5 H N N 116 DC H6 H N N 117 DG OP3 O N N 118 DG P P N N 119 DG OP1 O N N 120 DG OP2 O N N 121 DG "O5'" O N N 122 DG "C5'" C N N 123 DG "C4'" C N R 124 DG "O4'" O N N 125 DG "C3'" C N S 126 DG "O3'" O N N 127 DG "C2'" C N N 128 DG "C1'" C N R 129 DG N9 N Y N 130 DG C8 C Y N 131 DG N7 N Y N 132 DG C5 C Y N 133 DG C6 C N N 134 DG O6 O N N 135 DG N1 N N N 136 DG C2 C N N 137 DG N2 N N N 138 DG N3 N N N 139 DG C4 C Y N 140 DG HOP3 H N N 141 DG HOP2 H N N 142 DG "H5'" H N N 143 DG "H5''" H N N 144 DG "H4'" H N N 145 DG "H3'" H N N 146 DG "HO3'" H N N 147 DG "H2'" H N N 148 DG "H2''" H N N 149 DG "H1'" H N N 150 DG H8 H N N 151 DG H1 H N N 152 DG H21 H N N 153 DG H22 H N N 154 DT OP3 O N N 155 DT P P N N 156 DT OP1 O N N 157 DT OP2 O N N 158 DT "O5'" O N N 159 DT "C5'" C N N 160 DT "C4'" C N R 161 DT "O4'" O N N 162 DT "C3'" C N S 163 DT "O3'" O N N 164 DT "C2'" C N N 165 DT "C1'" C N R 166 DT N1 N N N 167 DT C2 C N N 168 DT O2 O N N 169 DT N3 N N N 170 DT C4 C N N 171 DT O4 O N N 172 DT C5 C N N 173 DT C7 C N N 174 DT C6 C N N 175 DT HOP3 H N N 176 DT HOP2 H N N 177 DT "H5'" H N N 178 DT "H5''" H N N 179 DT "H4'" H N N 180 DT "H3'" H N N 181 DT "HO3'" H N N 182 DT "H2'" H N N 183 DT "H2''" H N N 184 DT "H1'" H N N 185 DT H3 H N N 186 DT H71 H N N 187 DT H72 H N N 188 DT H73 H N N 189 DT H6 H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 127 P OP1 doub N N 1 127 P OP2 sing N N 2 127 P OP3 sing N N 3 127 P "O5'" sing N N 4 127 OP2 HOP2 sing N N 5 127 OP3 HOP3 sing N N 6 127 "O5'" "C5'" sing N N 7 127 "C5'" "C4'" sing N N 8 127 "C5'" "H5'" sing N N 9 127 "C5'" "H5''" sing N N 10 127 "C4'" "O4'" sing N N 11 127 "C4'" "C3'" sing N N 12 127 "C4'" "H4'" sing N N 13 127 "O4'" "C1'" sing N N 14 127 "C3'" "O3'" sing N N 15 127 "C3'" "C2'" sing N N 16 127 "C3'" "H3'" sing N N 17 127 "O3'" "HO3'" sing N N 18 127 "C2'" "O2'" sing N N 19 127 "C2'" "C1'" sing N N 20 127 "C2'" "H2'" sing N N 21 127 "O2'" "CA'" sing N N 22 127 "C1'" N1 sing N N 23 127 "C1'" "H1'" sing N N 24 127 N1 C2 sing N N 25 127 N1 C6 sing N N 26 127 C2 O2 doub N N 27 127 C2 N3 sing N N 28 127 N3 C4 sing N N 29 127 N3 H3 sing N N 30 127 C4 O4 doub N N 31 127 C4 C5 sing N N 32 127 C5 C5M sing N N 33 127 C5 C6 doub N N 34 127 C5M H71 sing N N 35 127 C5M H72 sing N N 36 127 C5M H73 sing N N 37 127 C6 H6 sing N N 38 127 "CA'" "CB'" sing N N 39 127 "CA'" "HA'1" sing N N 40 127 "CA'" "HA'2" sing N N 41 127 "CB'" "OC'" sing N N 42 127 "CB'" "HB'1" sing N N 43 127 "CB'" "HB'2" sing N N 44 127 "OC'" "ND'" sing N N 45 127 "ND'" "HD'1" sing N N 46 127 "ND'" "HD'2" sing N N 47 DA OP3 P sing N N 48 DA OP3 HOP3 sing N N 49 DA P OP1 doub N N 50 DA P OP2 sing N N 51 DA P "O5'" sing N N 52 DA OP2 HOP2 sing N N 53 DA "O5'" "C5'" sing N N 54 DA "C5'" "C4'" sing N N 55 DA "C5'" "H5'" sing N N 56 DA "C5'" "H5''" sing N N 57 DA "C4'" "O4'" sing N N 58 DA "C4'" "C3'" sing N N 59 DA "C4'" "H4'" sing N N 60 DA "O4'" "C1'" sing N N 61 DA "C3'" "O3'" sing N N 62 DA "C3'" "C2'" sing N N 63 DA "C3'" "H3'" sing N N 64 DA "O3'" "HO3'" sing N N 65 DA "C2'" "C1'" sing N N 66 DA "C2'" "H2'" sing N N 67 DA "C2'" "H2''" sing N N 68 DA "C1'" N9 sing N N 69 DA "C1'" "H1'" sing N N 70 DA N9 C8 sing Y N 71 DA N9 C4 sing Y N 72 DA C8 N7 doub Y N 73 DA C8 H8 sing N N 74 DA N7 C5 sing Y N 75 DA C5 C6 sing Y N 76 DA C5 C4 doub Y N 77 DA C6 N6 sing N N 78 DA C6 N1 doub Y N 79 DA N6 H61 sing N N 80 DA N6 H62 sing N N 81 DA N1 C2 sing Y N 82 DA C2 N3 doub Y N 83 DA C2 H2 sing N N 84 DA N3 C4 sing Y N 85 DC OP3 P sing N N 86 DC OP3 HOP3 sing N N 87 DC P OP1 doub N N 88 DC P OP2 sing N N 89 DC P "O5'" sing N N 90 DC OP2 HOP2 sing N N 91 DC "O5'" "C5'" sing N N 92 DC "C5'" "C4'" sing N N 93 DC "C5'" "H5'" sing N N 94 DC "C5'" "H5''" sing N N 95 DC "C4'" "O4'" sing N N 96 DC "C4'" "C3'" sing N N 97 DC "C4'" "H4'" sing N N 98 DC "O4'" "C1'" sing N N 99 DC "C3'" "O3'" sing N N 100 DC "C3'" "C2'" sing N N 101 DC "C3'" "H3'" sing N N 102 DC "O3'" "HO3'" sing N N 103 DC "C2'" "C1'" sing N N 104 DC "C2'" "H2'" sing N N 105 DC "C2'" "H2''" sing N N 106 DC "C1'" N1 sing N N 107 DC "C1'" "H1'" sing N N 108 DC N1 C2 sing N N 109 DC N1 C6 sing N N 110 DC C2 O2 doub N N 111 DC C2 N3 sing N N 112 DC N3 C4 doub N N 113 DC C4 N4 sing N N 114 DC C4 C5 sing N N 115 DC N4 H41 sing N N 116 DC N4 H42 sing N N 117 DC C5 C6 doub N N 118 DC C5 H5 sing N N 119 DC C6 H6 sing N N 120 DG OP3 P sing N N 121 DG OP3 HOP3 sing N N 122 DG P OP1 doub N N 123 DG P OP2 sing N N 124 DG P "O5'" sing N N 125 DG OP2 HOP2 sing N N 126 DG "O5'" "C5'" sing N N 127 DG "C5'" "C4'" sing N N 128 DG "C5'" "H5'" sing N N 129 DG "C5'" "H5''" sing N N 130 DG "C4'" "O4'" sing N N 131 DG "C4'" "C3'" sing N N 132 DG "C4'" "H4'" sing N N 133 DG "O4'" "C1'" sing N N 134 DG "C3'" "O3'" sing N N 135 DG "C3'" "C2'" sing N N 136 DG "C3'" "H3'" sing N N 137 DG "O3'" "HO3'" sing N N 138 DG "C2'" "C1'" sing N N 139 DG "C2'" "H2'" sing N N 140 DG "C2'" "H2''" sing N N 141 DG "C1'" N9 sing N N 142 DG "C1'" "H1'" sing N N 143 DG N9 C8 sing Y N 144 DG N9 C4 sing Y N 145 DG C8 N7 doub Y N 146 DG C8 H8 sing N N 147 DG N7 C5 sing Y N 148 DG C5 C6 sing N N 149 DG C5 C4 doub Y N 150 DG C6 O6 doub N N 151 DG C6 N1 sing N N 152 DG N1 C2 sing N N 153 DG N1 H1 sing N N 154 DG C2 N2 sing N N 155 DG C2 N3 doub N N 156 DG N2 H21 sing N N 157 DG N2 H22 sing N N 158 DG N3 C4 sing N N 159 DT OP3 P sing N N 160 DT OP3 HOP3 sing N N 161 DT P OP1 doub N N 162 DT P OP2 sing N N 163 DT P "O5'" sing N N 164 DT OP2 HOP2 sing N N 165 DT "O5'" "C5'" sing N N 166 DT "C5'" "C4'" sing N N 167 DT "C5'" "H5'" sing N N 168 DT "C5'" "H5''" sing N N 169 DT "C4'" "O4'" sing N N 170 DT "C4'" "C3'" sing N N 171 DT "C4'" "H4'" sing N N 172 DT "O4'" "C1'" sing N N 173 DT "C3'" "O3'" sing N N 174 DT "C3'" "C2'" sing N N 175 DT "C3'" "H3'" sing N N 176 DT "O3'" "HO3'" sing N N 177 DT "C2'" "C1'" sing N N 178 DT "C2'" "H2'" sing N N 179 DT "C2'" "H2''" sing N N 180 DT "C1'" N1 sing N N 181 DT "C1'" "H1'" sing N N 182 DT N1 C2 sing N N 183 DT N1 C6 sing N N 184 DT C2 O2 doub N N 185 DT C2 N3 sing N N 186 DT N3 C4 sing N N 187 DT N3 H3 sing N N 188 DT C4 O4 doub N N 189 DT C4 C5 sing N N 190 DT C5 C7 sing N N 191 DT C5 C6 doub N N 192 DT C7 H71 sing N N 193 DT C7 H72 sing N N 194 DT C7 H73 sing N N 195 DT C6 H6 sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 # _ndb_struct_conf_na.entry_id 1I0F _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 10 1_555 -0.285 -0.169 0.232 1.610 -7.520 -1.823 1 A_DG1:DC20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.143 -0.101 -0.155 8.488 -15.588 1.054 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DG 3 1_555 B DC 8 1_555 -0.229 -0.056 0.020 -7.115 -14.078 2.666 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DT 4 1_555 B DA 7 1_555 -0.100 -0.092 -0.012 -3.733 -15.567 -1.384 4 A_DT4:DA17_B A 4 ? B 17 ? 20 1 1 A DA 5 1_555 B 127 6 1_555 0.222 -0.056 0.309 -1.499 -11.020 -4.261 5 A_DA5:12716_B A 5 ? B 16 ? 20 1 1 A 127 6 1_555 B DA 5 1_555 -0.041 -0.072 0.384 5.384 -13.979 4.816 6 A_1276:DA15_B A 6 ? B 15 ? 20 1 1 A DA 7 1_555 B DT 4 1_555 0.006 -0.140 0.090 2.098 -12.630 2.279 7 A_DA7:DT14_B A 7 ? B 14 ? 20 1 1 A DC 8 1_555 B DG 3 1_555 0.220 -0.169 0.003 6.152 -12.439 -0.296 8 A_DC8:DG13_B A 8 ? B 13 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.228 -0.163 0.044 -5.901 -9.151 2.660 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DC 10 1_555 B DG 1 1_555 0.194 -0.160 0.083 -4.858 5.001 -0.281 10 A_DC10:DG11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 10 1_555 A DC 2 1_555 B DG 9 1_555 0.318 -1.385 3.109 3.737 0.994 39.416 -2.155 -0.054 3.091 1.469 -5.524 39.598 1 AA_DG1DC2:DG19DC20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 0.324 -2.071 3.573 -0.324 11.236 25.833 -6.802 -0.739 2.469 23.752 0.686 28.135 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 8 1_555 A DT 4 1_555 B DA 7 1_555 -1.235 -1.493 3.100 -2.122 5.307 36.179 -3.052 1.696 2.925 8.481 3.390 36.613 3 AA_DG3DT4:DA17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DT 4 1_555 B DA 7 1_555 A DA 5 1_555 B 127 6 1_555 0.670 -1.684 3.102 0.875 19.142 26.568 -5.634 -1.071 1.583 36.262 -1.658 32.656 4 AA_DT4DA5:12716DA17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DA 5 1_555 B 127 6 1_555 A 127 6 1_555 B DA 5 1_555 0.817 -1.428 3.079 1.379 4.785 31.620 -3.381 -1.254 2.870 8.713 -2.512 32.000 5 AA_DA51276:DA1512716_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A 127 6 1_555 B DA 5 1_555 A DA 7 1_555 B DT 4 1_555 -0.279 -1.473 3.108 1.677 15.170 31.117 -4.472 0.690 2.162 26.383 -2.916 34.575 6 AA_1276DA7:DT14DA15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DA 7 1_555 B DT 4 1_555 A DC 8 1_555 B DG 3 1_555 0.128 -1.682 3.277 0.406 3.012 31.748 -3.597 -0.161 3.110 5.490 -0.741 31.890 7 AA_DA7DC8:DG13DT14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.148 -1.955 3.426 0.153 11.782 28.495 -5.831 0.307 2.443 22.746 -0.296 30.789 8 AA_DC8DG9:DC12DG13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DC 10 1_555 B DG 1 1_555 0.222 -1.737 3.370 0.933 1.456 35.153 -3.094 -0.225 3.303 2.410 -1.543 35.194 9 AA_DG9DC10:DG11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _atom_sites.entry_id 1I0F _atom_sites.fract_transf_matrix[1][1] 0.040016 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022437 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022163 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C N O P # loop_