HEADER    DNA                                     01-MAR-01   1I5V              
TITLE     SOLUTION STRUCTURE OF 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL        
TITLE    2 INTERCALATED IN THE DNA DUPLEX D(CGATCG)2                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: 5'-D(*CP*GP*AP*TP*CP*G)-3';                                
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    DRUG-DNA COMPLEX, DOUBLE HELIX, DNA                                   
EXPDTA    SOLUTION NMR                                                          
NUMMDL    22                                                                    
AUTHOR    A.FAVIER,M.BLACKLEDGE,J.P.SIMORRE,D.MARION,J.C.DEBOUSY                
REVDAT   6   22-MAY-24 1I5V    1       REMARK                                   
REVDAT   5   23-FEB-22 1I5V    1       REMARK                                   
REVDAT   4   24-FEB-09 1I5V    1       VERSN                                    
REVDAT   3   01-APR-03 1I5V    1       JRNL                                     
REVDAT   2   22-AUG-01 1I5V    1       JRNL                                     
REVDAT   1   14-MAR-01 1I5V    0                                                
JRNL        AUTH   A.FAVIER,M.BLACKLEDGE,J.P.SIMORRE,S.CROUZY,V.DABOUIS,        
JRNL        AUTH 2 A.GUEIFFIER,D.MARION,J.C.DEBOUZY                             
JRNL        TITL   SOLUTION STRUCTURE OF                                        
JRNL        TITL 2 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL INTERCALATED IN THE 
JRNL        TITL 3 DNA DUPLEX D(CGATCG)2.                                       
JRNL        REF    BIOCHEMISTRY                  V.  40  8717 2001              
JRNL        REFN                   ISSN 0006-2960                               
JRNL        PMID   11467931                                                     
JRNL        DOI    10.1021/BI0024963                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : VNMR 6.A, DISCOVER                                   
REMARK   3   AUTHORS     : MOLECULAR SIMULATIONS INC. (DISCOVER)                
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: CALCULATION FROM RANDOMIZED CARTESIAN     
REMARK   3  COORDINATES                                                         
REMARK   4                                                                      
REMARK   4 1I5V COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-01.                  
REMARK 100 THE DEPOSITION ID IS D_1000012942.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 7                                  
REMARK 210  PH                             : 7                                  
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 2 MM 2-(PYRIDO[1,2-E]PURIN-4       
REMARK 210  -YL)AMINO-ETHANOL, 2MM D(CGATCG)2 160 MM KCL, 0.15 MM EDTA, 20      
REMARK 210  MM SODIUM PHOSPHATE; 2 MM 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-         
REMARK 210  ETHANOL, 2MM D(CGATCG)2 160 MM KCL, 0.15 MM EDTA, 20 MM SODIUM      
REMARK 210  PHOSPHATE                                                           
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D NOESY; DQF-COSY; TOCSY; 1H-1H   
REMARK 210                                   CT COSY                            
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ; 400 MHZ          
REMARK 210  SPECTROMETER MODEL             : INOVA; AMX                         
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN; BRUKER                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : FELIX, INSIGHT 97, DISCOVER        
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 22                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : THE SUBMITTED CONFORMER MODELS     
REMARK 210                                   ARE THE 22 STRUCTURES WITH THE     
REMARK 210                                   LOWEST EXPERIMENTAL ENERGY         
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 12                  
REMARK 210                                                                      
REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D              
REMARK 210  HOMONUCLEAR TECHNIQUES.                                             
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   H3'   DC A     1    H5''   DG A     2              1.35            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  1  DC A   1   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500  1  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   3.8 DEGREES          
REMARK 500  1  DT A   4   C6  -  C5  -  C7  ANGL. DEV. =  -3.9 DEGREES          
REMARK 500  1  DG A   6   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  1  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   1.8 DEGREES          
REMARK 500  1  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500  1  DG B   6   O4' -  C1' -  N9  ANGL. DEV. =   2.1 DEGREES          
REMARK 500  2  DC A   1   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  2  DG A   2   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500  2  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500  2  DC B   1   O4' -  C1' -  N1  ANGL. DEV. =   5.0 DEGREES          
REMARK 500  2  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  2  DT B   4   C1' -  O4' -  C4' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500  2  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   5.0 DEGREES          
REMARK 500  3  DC A   1   O4' -  C1' -  N1  ANGL. DEV. =   4.8 DEGREES          
REMARK 500  3  DG A   2   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500  3  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  3  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  3  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500  4  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500  4  DT A   4   C6  -  C5  -  C7  ANGL. DEV. =  -4.1 DEGREES          
REMARK 500  4  DG A   6   C1' -  O4' -  C4' ANGL. DEV. =  -6.1 DEGREES          
REMARK 500  4  DG A   6   O4' -  C1' -  N9  ANGL. DEV. =   2.8 DEGREES          
REMARK 500  4  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  4  DA B   3   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  4  DT B   4   C1' -  O4' -  C4' ANGL. DEV. =  -6.0 DEGREES          
REMARK 500  4  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   5.2 DEGREES          
REMARK 500  5  DC A   1   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500  5  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500  5  DC B   1   O4' -  C1' -  N1  ANGL. DEV. =   1.8 DEGREES          
REMARK 500  5  DG B   2   C1' -  O4' -  C4' ANGL. DEV. =  -8.1 DEGREES          
REMARK 500  5  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500  5  DT B   4   C1' -  O4' -  C4' ANGL. DEV. =  -6.1 DEGREES          
REMARK 500  5  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   5.3 DEGREES          
REMARK 500  5  DC B   5   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  6  DT A   4   C1' -  O4' -  C4' ANGL. DEV. =  -6.5 DEGREES          
REMARK 500  6  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   5.7 DEGREES          
REMARK 500  6  DC B   1   O4' -  C1' -  N1  ANGL. DEV. =   5.7 DEGREES          
REMARK 500  6  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   3.7 DEGREES          
REMARK 500  6  DT B   4   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500  6  DC B   5   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  7  DC A   1   O4' -  C1' -  N1  ANGL. DEV. =   2.6 DEGREES          
REMARK 500  7  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500  7  DC A   5   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500  7  DC B   1   O4' -  C4' -  C3' ANGL. DEV. =   3.9 DEGREES          
REMARK 500  7  DC B   1   O4' -  C1' -  N1  ANGL. DEV. =   4.0 DEGREES          
REMARK 500  7  DG B   2   C1' -  O4' -  C4' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500  7  DG B   2   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  7  DT B   4   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  8  DC A   1   O4' -  C4' -  C3' ANGL. DEV. =   4.3 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     136 ANGLE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1  DC A   1         0.07    SIDE CHAIN                              
REMARK 500  1  DC A   5         0.14    SIDE CHAIN                              
REMARK 500  1  DG A   6         0.15    SIDE CHAIN                              
REMARK 500  1  DG B   2         0.08    SIDE CHAIN                              
REMARK 500  1  DC B   5         0.14    SIDE CHAIN                              
REMARK 500  1  DG B   6         0.14    SIDE CHAIN                              
REMARK 500  2  DC A   1         0.06    SIDE CHAIN                              
REMARK 500  2  DA A   3         0.07    SIDE CHAIN                              
REMARK 500  2  DG A   6         0.13    SIDE CHAIN                              
REMARK 500  2  DC B   1         0.08    SIDE CHAIN                              
REMARK 500  2  DG B   2         0.07    SIDE CHAIN                              
REMARK 500  2  DC B   5         0.13    SIDE CHAIN                              
REMARK 500  2  DG B   6         0.16    SIDE CHAIN                              
REMARK 500  3  DC A   1         0.07    SIDE CHAIN                              
REMARK 500  3  DG A   2         0.09    SIDE CHAIN                              
REMARK 500  3  DC A   5         0.10    SIDE CHAIN                              
REMARK 500  3  DG A   6         0.16    SIDE CHAIN                              
REMARK 500  3  DG B   2         0.07    SIDE CHAIN                              
REMARK 500  3  DG B   6         0.14    SIDE CHAIN                              
REMARK 500  4  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  4  DC A   5         0.07    SIDE CHAIN                              
REMARK 500  4  DG A   6         0.16    SIDE CHAIN                              
REMARK 500  4  DC B   1         0.06    SIDE CHAIN                              
REMARK 500  4  DC B   5         0.09    SIDE CHAIN                              
REMARK 500  4  DG B   6         0.16    SIDE CHAIN                              
REMARK 500  5  DC A   1         0.07    SIDE CHAIN                              
REMARK 500  5  DC A   5         0.07    SIDE CHAIN                              
REMARK 500  5  DG A   6         0.14    SIDE CHAIN                              
REMARK 500  5  DC B   1         0.09    SIDE CHAIN                              
REMARK 500  5  DC B   5         0.12    SIDE CHAIN                              
REMARK 500  5  DG B   6         0.13    SIDE CHAIN                              
REMARK 500  6  DC A   5         0.08    SIDE CHAIN                              
REMARK 500  6  DG A   6         0.17    SIDE CHAIN                              
REMARK 500  6  DC B   1         0.14    SIDE CHAIN                              
REMARK 500  6  DG B   2         0.06    SIDE CHAIN                              
REMARK 500  6  DA B   3         0.08    SIDE CHAIN                              
REMARK 500  6  DC B   5         0.11    SIDE CHAIN                              
REMARK 500  6  DG B   6         0.16    SIDE CHAIN                              
REMARK 500  7  DC A   1         0.09    SIDE CHAIN                              
REMARK 500  7  DC A   5         0.09    SIDE CHAIN                              
REMARK 500  7  DG A   6         0.16    SIDE CHAIN                              
REMARK 500  7  DC B   1         0.07    SIDE CHAIN                              
REMARK 500  7  DG B   2         0.06    SIDE CHAIN                              
REMARK 500  7  DA B   3         0.06    SIDE CHAIN                              
REMARK 500  7  DC B   5         0.07    SIDE CHAIN                              
REMARK 500  7  DG B   6         0.16    SIDE CHAIN                              
REMARK 500  8  DG A   2         0.08    SIDE CHAIN                              
REMARK 500  8  DC A   5         0.10    SIDE CHAIN                              
REMARK 500  8  DG A   6         0.13    SIDE CHAIN                              
REMARK 500  8  DG B   6         0.15    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     117 PLANE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPZ A 7                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPZ B 7                   
DBREF  1I5V A    1     6  PDB    1I5V     1I5V             1      6             
DBREF  1I5V B    1     6  PDB    1I5V     1I5V             1      6             
SEQRES   1 A    6   DC  DG  DA  DT  DC  DG                                      
SEQRES   1 B    6   DC  DG  DA  DT  DC  DG                                      
HET    PPZ  A   7      28                                                       
HET    PPZ  B   7      28                                                       
HETNAM     PPZ 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL                         
FORMUL   3  PPZ    2(C11 H11 N5 O)                                              
SITE     1 AC1  4  DC A   5   DG A   6   DC B   1   DG B   2                    
SITE     1 AC2  4  DC A   1   DG A   2   DC B   5   DG B   6                    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1