data_1I7J
# 
_entry.id   1I7J 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.376 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1I7J         pdb_00001i7j 10.2210/pdb1i7j/pdb 
NDB   AR0031       ?            ?                   
RCSB  RCSB013002   ?            ?                   
WWPDB D_1000013002 ?            ?                   
# 
_pdbx_database_related.db_name        PDB 
_pdbx_database_related.db_id          310D 
_pdbx_database_related.details        
;310D contains the same 2'-O-methylated RNA, at room temperature 
and higher hydration state.
;
_pdbx_database_related.content_type   unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1I7J 
_pdbx_database_status.recvd_initial_deposition_date   2001-03-09 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Adamiak, D.A.'    1 
'Rypniewski, W.R.' 2 
'Milecki, J.'      3 
'Adamiak, R.W.'    4 
# 
loop_
_citation.id 
_citation.title 
_citation.journal_abbrev 
_citation.journal_volume 
_citation.page_first 
_citation.page_last 
_citation.year 
_citation.journal_id_ASTM 
_citation.country 
_citation.journal_id_ISSN 
_citation.journal_id_CSD 
_citation.book_publisher 
_citation.pdbx_database_id_PubMed 
_citation.pdbx_database_id_DOI 
primary 
;The 1.19 A X-ray structure of 2'-O-Me(CGCGCG)(2) duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove.
;
'Nucleic Acids Res.' 29 4144 4153 2001 NARHAD UK 0305-1048 0389 ? 11600703 10.1093/nar/29.20.4144 
1       
;CRYSTAL STRUCTURE OF 2'-O-ME(CGCGCG)2: AN RNA DUPLEX AT 1.3 A RESOLUTION. HYDRATION PATTERN OF 2'-O-METHYLATED RNA
;
'Nucleic Acids Res.' 25 4599 4607 1997 NARHAD UK 0305-1048 0389 ? ?        10.1093/nar/25.22.4599 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Adamiak, D.A.'    1  ? 
primary 'Rypniewski, W.R.' 2  ? 
primary 'Milecki, J.'      3  ? 
primary 'Adamiak, R.W.'    4  ? 
1       'Adamiak, D.A.'    5  ? 
1       'Milecki, J.'      6  ? 
1       'Popenda, W.'      7  ? 
1       'Adamiak, R.W.'    8  ? 
1       'Dauter, A.'       9  ? 
1       'Rypniewski, W.R.' 10 ? 
# 
_cell.entry_id           1I7J 
_cell.length_a           24.805 
_cell.length_b           24.805 
_cell.length_c           77.372 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              12 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         1I7J 
_symmetry.space_group_name_H-M             'P 32 1 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                153 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-R(*(OMC)P*(OMG)P*(OMC)P*(OMG)P*(OMC)P*(OMG))-3'" 1990.361 2  ? ? ? ? 
2 non-polymer syn 'MAGNESIUM ION'                                      24.305   5  ? ? ? ? 
3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL'                      118.174  2  ? ? ? ? 
4 water       nat water                                                18.015   65 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(OMC)(OMG)(OMC)(OMG)(OMC)(OMG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGCGCG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 OMC n 
1 2 OMG n 
1 3 OMC n 
1 4 OMG n 
1 5 OMC n 
1 6 OMG n 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1I7J 
_struct_ref.pdbx_db_accession          1I7J 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1I7J A 1 ? 6 ? 1I7J 1 ? 6 ? 1 6 
2 1 1I7J B 1 ? 6 ? 1I7J 1 ? 6 ? 1 6 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
HOH non-polymer   . WATER                                  ? 'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'                        ? 'Mg 2'            24.305  
MPD non-polymer   . '(4S)-2-METHYL-2,4-PENTANEDIOL'        ? 'C6 H14 O2'       118.174 
OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 
OMG 'RNA linking' n "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O8 P' 377.247 
# 
_exptl.entry_id          1I7J 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      1.73 
_exptl_crystal.density_percent_sol   38 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            293 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.5 
_exptl_crystal_grow.pdbx_details    
;15 mM MgCl2, 1 mM spermine tetrahydrochloride and 30-40% 2-methyl-2,4-pentanediol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 MgCl2                         ? ? ? 
1 2 1 'spermine tetrahydrochloride' ? ? ? 
1 3 1 MPD                           ? ? ? 
1 4 2 MPD                           ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   1996-10-03 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    Si 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.900 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'EMBL/DESY, HAMBURG BEAMLINE BW7A' 
_diffrn_source.pdbx_synchrotron_site       'EMBL/DESY, HAMBURG' 
_diffrn_source.pdbx_synchrotron_beamline   BW7A 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        0.900 
# 
_reflns.entry_id                     1I7J 
_reflns.observed_criterion_sigma_I   0 
_reflns.observed_criterion_sigma_F   0 
_reflns.d_resolution_low             20 
_reflns.d_resolution_high            1.19 
_reflns.number_obs                   8715 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         95.8 
_reflns.pdbx_Rmerge_I_obs            0.049 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        23 
_reflns.B_iso_Wilson_estimate        13 
_reflns.pdbx_redundancy              17 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.19 
_reflns_shell.d_res_low              1.21 
_reflns_shell.percent_possible_all   94 
_reflns_shell.Rmerge_I_obs           0.46 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    2.1 
_reflns_shell.pdbx_redundancy        2.8 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      415 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1I7J 
_refine.ls_number_reflns_obs                     8715 
_refine.ls_number_reflns_all                     8715 
_refine.pdbx_ls_sigma_I                          0 
_refine.pdbx_ls_sigma_F                          0 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_d_res_low                             20 
_refine.ls_d_res_high                            1.19 
_refine.ls_percent_reflns_obs                    95.8 
_refine.ls_R_factor_obs                          0.155 
_refine.ls_R_factor_all                          0.155 
_refine.ls_R_factor_R_work                       0.155 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      'PDB 310D' 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       CCP4 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   376 
_refine_hist.pdbx_number_atoms_ligand         53 
_refine_hist.number_atoms_solvent             81 
_refine_hist.number_atoms_total               510 
_refine_hist.d_res_high                       1.19 
_refine_hist.d_res_low                        20 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_approx_iso_adps   0.068 ? ? ? 'X-RAY DIFFRACTION' ? 
s_bond_d            0.014 ? ? ? 'X-RAY DIFFRACTION' ? 
s_from_restr_planes 0.047 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   ? 
_refine_ls_shell.d_res_high                       1.19 
_refine_ls_shell.d_res_low                        1.21 
_refine_ls_shell.number_reflns_R_work             ? 
_refine_ls_shell.R_factor_R_work                  0.155 
_refine_ls_shell.percent_reflns_obs               95.8 
_refine_ls_shell.R_factor_R_free                  ? 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             ? 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.R_factor_all                     ? 
# 
_pdbx_refine.entry_id                                    1I7J 
_pdbx_refine.R_factor_all_no_cutoff                      ? 
_pdbx_refine.R_factor_obs_no_cutoff                      ? 
_pdbx_refine.free_R_factor_no_cutoff                     ? 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     ? 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            ? 
_pdbx_refine.R_factor_all_4sig_cutoff                    0.1415 
_pdbx_refine.R_factor_obs_4sig_cutoff                    ? 
_pdbx_refine.free_R_factor_4sig_cutoff                   ? 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   ? 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          8667 
_pdbx_refine.number_reflns_obs_4sig_cutoff               ? 
_pdbx_refine.number_reflns_obs_no_cutoff                 ? 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.free_R_error_no_cutoff                      ? 
# 
_struct.entry_id                  1I7J 
_struct.title                     
;CRYSTAL STRUCTURE OF 2'-O-ME(CGCGCG)2: AN RNA DUPLEX AT 1.19 A RESOLUTION. 2-METHYL-2,4-PENTANEDIOL AND MAGNESIUM BINDING.
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1I7J 
_struct_keywords.pdbx_keywords   RNA 
_struct_keywords.text            
;2'-O-MeRNA duplex, 2-methyl-2, 4-pentanediol, magnesium, groove hydration and binding, RNA
;
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
E N N 2 ? 
F N N 3 ? 
G N N 2 ? 
H N N 2 ? 
I N N 3 ? 
J N N 4 ? 
K N N 4 ? 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A OMC 1 "O3'" ? ? ? 1_555 A OMG 2 P  ? ? A OMC 1   A OMG 2   1_555 ? ? ? ? ? ? ?            1.611 ? ? 
covale2  covale both ? A OMG 2 "O3'" ? ? ? 1_555 A OMC 3 P  ? ? A OMG 2   A OMC 3   1_555 ? ? ? ? ? ? ?            1.607 ? ? 
covale3  covale both ? A OMC 3 "O3'" ? ? ? 1_555 A OMG 4 P  ? ? A OMC 3   A OMG 4   1_555 ? ? ? ? ? ? ?            1.603 ? ? 
covale4  covale both ? A OMG 4 "O3'" ? ? ? 1_555 A OMC 5 P  ? ? A OMG 4   A OMC 5   1_555 ? ? ? ? ? ? ?            1.624 ? ? 
covale5  covale both ? A OMC 5 "O3'" ? ? ? 1_555 A OMG 6 P  ? ? A OMC 5   A OMG 6   1_555 ? ? ? ? ? ? ?            1.595 ? ? 
covale6  covale both ? B OMC 1 "O3'" ? ? ? 1_555 B OMG 2 P  ? ? B OMC 1   B OMG 2   1_555 ? ? ? ? ? ? ?            1.592 ? ? 
covale7  covale both ? B OMG 2 "O3'" ? ? ? 1_555 B OMC 3 P  ? ? B OMG 2   B OMC 3   1_555 ? ? ? ? ? ? ?            1.588 ? ? 
covale8  covale both ? B OMC 3 "O3'" ? ? ? 1_555 B OMG 4 P  ? ? B OMC 3   B OMG 4   1_555 ? ? ? ? ? ? ?            1.608 ? ? 
covale9  covale both ? B OMG 4 "O3'" ? ? ? 1_555 B OMC 5 P  ? ? B OMG 4   B OMC 5   1_555 ? ? ? ? ? ? ?            1.616 ? ? 
covale10 covale both ? B OMC 5 "O3'" ? ? ? 1_555 B OMG 6 P  ? ? B OMC 5   B OMG 6   1_555 ? ? ? ? ? ? ?            1.611 ? ? 
metalc1  metalc ?    ? A OMG 2 OP1   ? ? ? 1_555 C MG  . MG ? ? A OMG 2   A MG  101 1_555 ? ? ? ? ? ? ?            2.065 ? ? 
metalc2  metalc ?    ? A OMC 5 OP1   ? ? ? 1_555 D MG  . MG ? ? A OMC 5   A MG  103 1_555 ? ? ? ? ? ? ?            1.947 ? ? 
metalc3  metalc ?    ? C MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  101 A HOH 224 1_555 ? ? ? ? ? ? ?            1.915 ? ? 
metalc4  metalc ?    ? C MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  101 A HOH 226 1_555 ? ? ? ? ? ? ?            2.190 ? ? 
metalc5  metalc ?    ? C MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  101 A HOH 228 1_555 ? ? ? ? ? ? ?            1.895 ? ? 
metalc6  metalc ?    ? D MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  103 A HOH 219 1_555 ? ? ? ? ? ? ?            2.080 ? ? 
metalc7  metalc ?    ? D MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  103 A HOH 221 1_555 ? ? ? ? ? ? ?            2.448 ? ? 
metalc8  metalc ?    ? D MG  . MG    ? ? ? 1_555 K HOH . O  ? ? A MG  103 B HOH 217 6_665 ? ? ? ? ? ? ?            2.159 ? ? 
metalc9  metalc ?    ? D MG  . MG    ? ? ? 1_555 K HOH . O  ? ? A MG  103 B HOH 223 6_665 ? ? ? ? ? ? ?            1.982 ? ? 
metalc10 metalc ?    ? D MG  . MG    ? ? ? 1_555 K HOH . O  ? ? A MG  103 B HOH 224 6_665 ? ? ? ? ? ? ?            1.909 ? ? 
metalc11 metalc ?    ? E MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  104 A HOH 208 1_555 ? ? ? ? ? ? ?            2.110 ? ? 
metalc12 metalc ?    ? E MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  104 A HOH 212 1_555 ? ? ? ? ? ? ?            1.893 ? ? 
metalc13 metalc ?    ? E MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  104 A HOH 218 1_555 ? ? ? ? ? ? ?            2.367 ? ? 
metalc14 metalc ?    ? E MG  . MG    ? ? ? 1_555 J HOH . O  ? ? A MG  104 A HOH 222 1_555 ? ? ? ? ? ? ?            1.906 ? ? 
metalc15 metalc ?    ? B OMG 2 OP1   ? ? ? 1_555 G MG  . MG ? ? B OMG 2   B MG  102 1_555 ? ? ? ? ? ? ?            2.022 ? ? 
metalc16 metalc ?    ? G MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  102 B HOH 219 1_555 ? ? ? ? ? ? ?            2.248 ? ? 
metalc17 metalc ?    ? G MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  102 B HOH 221 1_555 ? ? ? ? ? ? ?            2.004 ? ? 
metalc18 metalc ?    ? G MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  102 B HOH 222 1_555 ? ? ? ? ? ? ?            2.206 ? ? 
metalc19 metalc ?    ? G MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  102 B HOH 227 1_555 ? ? ? ? ? ? ?            2.019 ? ? 
metalc20 metalc ?    ? G MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  102 B HOH 232 1_555 ? ? ? ? ? ? ?            2.052 ? ? 
metalc21 metalc ?    ? H MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  105 B HOH 206 1_555 ? ? ? ? ? ? ?            2.089 ? ? 
metalc22 metalc ?    ? H MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  105 B HOH 207 1_555 ? ? ? ? ? ? ?            2.014 ? ? 
metalc23 metalc ?    ? H MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  105 B HOH 226 1_555 ? ? ? ? ? ? ?            1.752 ? ? 
metalc24 metalc ?    ? H MG  . MG    ? ? ? 1_555 K HOH . O  ? ? B MG  105 B HOH 231 1_555 ? ? ? ? ? ? ?            1.976 ? ? 
hydrog1  hydrog ?    ? A OMC 1 N3    ? ? ? 1_555 B OMG 6 N1 ? ? A OMC 1   B OMG 6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A OMC 1 N4    ? ? ? 1_555 B OMG 6 O6 ? ? A OMC 1   B OMG 6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A OMC 1 O2    ? ? ? 1_555 B OMG 6 N2 ? ? A OMC 1   B OMG 6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A OMG 2 N1    ? ? ? 1_555 B OMC 5 N3 ? ? A OMG 2   B OMC 5   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A OMG 2 N2    ? ? ? 1_555 B OMC 5 O2 ? ? A OMG 2   B OMC 5   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A OMG 2 O6    ? ? ? 1_555 B OMC 5 N4 ? ? A OMG 2   B OMC 5   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A OMC 3 N3    ? ? ? 1_555 B OMG 4 N1 ? ? A OMC 3   B OMG 4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A OMC 3 N4    ? ? ? 1_555 B OMG 4 O6 ? ? A OMC 3   B OMG 4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A OMC 3 O2    ? ? ? 1_555 B OMG 4 N2 ? ? A OMC 3   B OMG 4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A OMG 4 N1    ? ? ? 1_555 B OMC 3 N3 ? ? A OMG 4   B OMC 3   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A OMG 4 N2    ? ? ? 1_555 B OMC 3 O2 ? ? A OMG 4   B OMC 3   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A OMG 4 O6    ? ? ? 1_555 B OMC 3 N4 ? ? A OMG 4   B OMC 3   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A OMC 5 N3    ? ? ? 1_555 B OMG 2 N1 ? ? A OMC 5   B OMG 2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A OMC 5 N4    ? ? ? 1_555 B OMG 2 O6 ? ? A OMC 5   B OMG 2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A OMC 5 O2    ? ? ? 1_555 B OMG 2 N2 ? ? A OMC 5   B OMG 2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A OMG 6 N1    ? ? ? 1_555 B OMC 1 N3 ? ? A OMG 6   B OMC 1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A OMG 6 N2    ? ? ? 1_555 B OMC 1 O2 ? ? A OMG 6   B OMC 1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A OMG 6 O6    ? ? ? 1_555 B OMC 1 N4 ? ? A OMG 6   B OMC 1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A MG  101 ? 6 'BINDING SITE FOR RESIDUE MG A 101'  
AC2 Software B MG  102 ? 6 'BINDING SITE FOR RESIDUE MG B 102'  
AC3 Software A MG  103 ? 7 'BINDING SITE FOR RESIDUE MG A 103'  
AC4 Software A MG  104 ? 4 'BINDING SITE FOR RESIDUE MG A 104'  
AC5 Software B MG  105 ? 4 'BINDING SITE FOR RESIDUE MG B 105'  
AC6 Software A MPD 201 ? 5 'BINDING SITE FOR RESIDUE MPD A 201' 
AC7 Software B MPD 202 ? 6 'BINDING SITE FOR RESIDUE MPD B 202' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 6 OMG A 2 ? OMG A 2   . ? 1_555 ? 
2  AC1 6 HOH J . ? HOH A 224 . ? 1_555 ? 
3  AC1 6 HOH J . ? HOH A 225 . ? 1_555 ? 
4  AC1 6 HOH J . ? HOH A 226 . ? 1_555 ? 
5  AC1 6 HOH J . ? HOH A 228 . ? 1_555 ? 
6  AC1 6 HOH J . ? HOH A 229 . ? 1_555 ? 
7  AC2 6 OMG B 2 ? OMG B 2   . ? 1_555 ? 
8  AC2 6 HOH K . ? HOH B 219 . ? 1_555 ? 
9  AC2 6 HOH K . ? HOH B 221 . ? 1_555 ? 
10 AC2 6 HOH K . ? HOH B 222 . ? 1_555 ? 
11 AC2 6 HOH K . ? HOH B 227 . ? 1_555 ? 
12 AC2 6 HOH K . ? HOH B 232 . ? 1_555 ? 
13 AC3 7 OMC A 5 ? OMC A 5   . ? 1_555 ? 
14 AC3 7 HOH J . ? HOH A 219 . ? 1_555 ? 
15 AC3 7 HOH J . ? HOH A 221 . ? 1_555 ? 
16 AC3 7 OMC B 5 ? OMC B 5   . ? 6_665 ? 
17 AC3 7 HOH K . ? HOH B 217 . ? 6_665 ? 
18 AC3 7 HOH K . ? HOH B 223 . ? 6_665 ? 
19 AC3 7 HOH K . ? HOH B 224 . ? 6_665 ? 
20 AC4 4 HOH J . ? HOH A 208 . ? 1_555 ? 
21 AC4 4 HOH J . ? HOH A 212 . ? 1_555 ? 
22 AC4 4 HOH J . ? HOH A 218 . ? 1_555 ? 
23 AC4 4 HOH J . ? HOH A 222 . ? 1_555 ? 
24 AC5 4 HOH K . ? HOH B 206 . ? 1_555 ? 
25 AC5 4 HOH K . ? HOH B 207 . ? 1_555 ? 
26 AC5 4 HOH K . ? HOH B 226 . ? 1_555 ? 
27 AC5 4 HOH K . ? HOH B 231 . ? 1_555 ? 
28 AC6 5 OMG A 2 ? OMG A 2   . ? 1_555 ? 
29 AC6 5 OMC A 3 ? OMC A 3   . ? 1_555 ? 
30 AC6 5 OMG A 4 ? OMG A 4   . ? 6_555 ? 
31 AC6 5 OMG A 6 ? OMG A 6   . ? 1_545 ? 
32 AC6 5 HOH J . ? HOH A 213 . ? 1_555 ? 
33 AC7 6 OMC A 5 ? OMC A 5   . ? 1_555 ? 
34 AC7 6 OMG A 6 ? OMG A 6   . ? 1_555 ? 
35 AC7 6 OMG B 2 ? OMG B 2   . ? 1_555 ? 
36 AC7 6 OMC B 3 ? OMC B 3   . ? 1_555 ? 
37 AC7 6 OMG B 6 ? OMG B 6   . ? 1_565 ? 
38 AC7 6 HOH K . ? HOH B 216 . ? 1_555 ? 
# 
_database_PDB_matrix.entry_id          1I7J 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    1I7J 
_atom_sites.fract_transf_matrix[1][1]   0.040314 
_atom_sites.fract_transf_matrix[1][2]   0.023276 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.046551 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.012925 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C  
H  
MG 
N  
O  
P  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 OMC 1 1 1 OMC +C A . n 
A 1 2 OMG 2 2 2 OMG +G A . n 
A 1 3 OMC 3 3 3 OMC +C A . n 
A 1 4 OMG 4 4 4 OMG +G A . n 
A 1 5 OMC 5 5 5 OMC +C A . n 
A 1 6 OMG 6 6 6 OMG +G A . n 
B 1 1 OMC 1 1 1 OMC +C B . n 
B 1 2 OMG 2 2 2 OMG +G B . n 
B 1 3 OMC 3 3 3 OMC +C B . n 
B 1 4 OMG 4 4 4 OMG +G B . n 
B 1 5 OMC 5 5 5 OMC +C B . n 
B 1 6 OMG 6 6 6 OMG +G B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 MG  1  101 1  MG  MG  A . 
D 2 MG  1  103 3  MG  MG  A . 
E 2 MG  1  104 4  MG  MG  A . 
F 3 MPD 1  201 1  MPD MPD A . 
G 2 MG  1  102 2  MG  MG  B . 
H 2 MG  1  105 5  MG  MG  B . 
I 3 MPD 1  202 2  MPD MPD B . 
J 4 HOH 1  202 1  HOH HOH A . 
J 4 HOH 2  203 4  HOH HOH A . 
J 4 HOH 3  204 5  HOH HOH A . 
J 4 HOH 4  205 6  HOH HOH A . 
J 4 HOH 5  206 12 HOH HOH A . 
J 4 HOH 6  207 13 HOH HOH A . 
J 4 HOH 7  208 14 HOH HOH A . 
J 4 HOH 8  209 15 HOH HOH A . 
J 4 HOH 9  210 16 HOH HOH A . 
J 4 HOH 10 211 17 HOH HOH A . 
J 4 HOH 11 212 18 HOH HOH A . 
J 4 HOH 12 213 20 HOH HOH A . 
J 4 HOH 13 214 24 HOH HOH A . 
J 4 HOH 14 215 26 HOH HOH A . 
J 4 HOH 15 216 30 HOH HOH A . 
J 4 HOH 16 217 32 HOH HOH A . 
J 4 HOH 17 218 37 HOH HOH A . 
J 4 HOH 18 219 38 HOH HOH A . 
J 4 HOH 19 220 39 HOH HOH A . 
J 4 HOH 20 221 40 HOH HOH A . 
J 4 HOH 21 222 43 HOH HOH A . 
J 4 HOH 22 223 44 HOH HOH A . 
J 4 HOH 23 224 45 HOH HOH A . 
J 4 HOH 24 225 46 HOH HOH A . 
J 4 HOH 25 226 47 HOH HOH A . 
J 4 HOH 26 227 48 HOH HOH A . 
J 4 HOH 27 228 49 HOH HOH A . 
J 4 HOH 28 229 51 HOH HOH A . 
J 4 HOH 29 230 52 HOH HOH A . 
J 4 HOH 30 231 55 HOH HOH A . 
J 4 HOH 31 232 59 HOH HOH A . 
J 4 HOH 32 233 61 HOH HOH A . 
J 4 HOH 33 234 62 HOH HOH A . 
K 4 HOH 1  203 2  HOH HOH B . 
K 4 HOH 2  204 3  HOH HOH B . 
K 4 HOH 3  205 7  HOH HOH B . 
K 4 HOH 4  206 8  HOH HOH B . 
K 4 HOH 5  207 9  HOH HOH B . 
K 4 HOH 6  208 10 HOH HOH B . 
K 4 HOH 7  209 11 HOH HOH B . 
K 4 HOH 8  210 19 HOH HOH B . 
K 4 HOH 9  211 21 HOH HOH B . 
K 4 HOH 10 212 22 HOH HOH B . 
K 4 HOH 11 213 23 HOH HOH B . 
K 4 HOH 12 214 25 HOH HOH B . 
K 4 HOH 13 215 27 HOH HOH B . 
K 4 HOH 14 216 28 HOH HOH B . 
K 4 HOH 15 217 29 HOH HOH B . 
K 4 HOH 16 218 31 HOH HOH B . 
K 4 HOH 17 219 33 HOH HOH B . 
K 4 HOH 18 220 34 HOH HOH B . 
K 4 HOH 19 221 35 HOH HOH B . 
K 4 HOH 20 222 36 HOH HOH B . 
K 4 HOH 21 223 41 HOH HOH B . 
K 4 HOH 22 224 42 HOH HOH B . 
K 4 HOH 23 225 50 HOH HOH B . 
K 4 HOH 24 226 53 HOH HOH B . 
K 4 HOH 25 227 54 HOH HOH B . 
K 4 HOH 26 228 56 HOH HOH B . 
K 4 HOH 27 229 57 HOH HOH B . 
K 4 HOH 28 230 58 HOH HOH B . 
K 4 HOH 29 231 60 HOH HOH B . 
K 4 HOH 30 232 63 HOH HOH B . 
K 4 HOH 31 233 64 HOH HOH B . 
K 4 HOH 32 234 65 HOH HOH B . 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1  A OMC 1 A OMC 1 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
2  A OMG 2 A OMG 2 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
3  A OMC 3 A OMC 3 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
4  A OMG 4 A OMG 4 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
5  A OMC 5 A OMC 5 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
6  A OMG 6 A OMG 6 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
7  B OMC 1 B OMC 1 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
8  B OMG 2 B OMG 2 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
9  B OMC 3 B OMC 3 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
10 B OMG 4 B OMG 4 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
11 B OMC 5 B OMC 5 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 
12 B OMG 6 B OMG 6 ? G "O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE" 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I,J,K 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1 1 A HOH 211 ? J HOH . 
2 1 B HOH 215 ? K HOH . 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  OP1 ? A OMG 2 ? A OMG 2   ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 224 ? 1_555 75.4  ? 
2  OP1 ? A OMG 2 ? A OMG 2   ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 226 ? 1_555 96.4  ? 
3  O   ? J HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 226 ? 1_555 82.7  ? 
4  OP1 ? A OMG 2 ? A OMG 2   ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 228 ? 1_555 172.9 ? 
5  O   ? J HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 228 ? 1_555 107.7 ? 
6  O   ? J HOH . ? A HOH 226 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? A HOH 228 ? 1_555 90.4  ? 
7  OP1 ? A OMC 5 ? A OMC 5   ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? J HOH . ? A HOH 219 ? 1_555 85.4  ? 
8  OP1 ? A OMC 5 ? A OMC 5   ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? J HOH . ? A HOH 221 ? 1_555 86.8  ? 
9  O   ? J HOH . ? A HOH 219 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? J HOH . ? A HOH 221 ? 1_555 98.2  ? 
10 OP1 ? A OMC 5 ? A OMC 5   ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 217 ? 6_665 100.5 ? 
11 O   ? J HOH . ? A HOH 219 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 217 ? 6_665 162.3 ? 
12 O   ? J HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 217 ? 6_665 98.8  ? 
13 OP1 ? A OMC 5 ? A OMC 5   ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 223 ? 6_665 97.7  ? 
14 O   ? J HOH . ? A HOH 219 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 223 ? 6_665 59.3  ? 
15 O   ? J HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 223 ? 6_665 41.6  ? 
16 O   ? K HOH . ? B HOH 217 ? 6_665 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 223 ? 6_665 135.0 ? 
17 OP1 ? A OMC 5 ? A OMC 5   ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 224 ? 6_665 80.2  ? 
18 O   ? J HOH . ? A HOH 219 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 224 ? 6_665 138.5 ? 
19 O   ? J HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 224 ? 6_665 42.6  ? 
20 O   ? K HOH . ? B HOH 217 ? 6_665 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 224 ? 6_665 59.2  ? 
21 O   ? K HOH . ? B HOH 223 ? 6_665 MG ? D MG . ? A MG 103 ? 1_555 O ? K HOH . ? B HOH 224 ? 6_665 84.2  ? 
22 O   ? J HOH . ? A HOH 208 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 212 ? 1_555 95.6  ? 
23 O   ? J HOH . ? A HOH 208 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 218 ? 1_555 167.7 ? 
24 O   ? J HOH . ? A HOH 212 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 218 ? 1_555 92.7  ? 
25 O   ? J HOH . ? A HOH 208 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 222 ? 1_555 101.2 ? 
26 O   ? J HOH . ? A HOH 212 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 222 ? 1_555 85.2  ? 
27 O   ? J HOH . ? A HOH 218 ? 1_555 MG ? E MG . ? A MG 104 ? 1_555 O ? J HOH . ? A HOH 222 ? 1_555 88.6  ? 
28 OP1 ? B OMG 2 ? B OMG 2   ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 219 ? 1_555 102.1 ? 
29 OP1 ? B OMG 2 ? B OMG 2   ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 221 ? 1_555 98.8  ? 
30 O   ? K HOH . ? B HOH 219 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 221 ? 1_555 87.2  ? 
31 OP1 ? B OMG 2 ? B OMG 2   ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 222 ? 1_555 160.4 ? 
32 O   ? K HOH . ? B HOH 219 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 222 ? 1_555 96.3  ? 
33 O   ? K HOH . ? B HOH 221 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 222 ? 1_555 88.6  ? 
34 OP1 ? B OMG 2 ? B OMG 2   ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 227 ? 1_555 95.8  ? 
35 O   ? K HOH . ? B HOH 219 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 227 ? 1_555 78.3  ? 
36 O   ? K HOH . ? B HOH 221 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 227 ? 1_555 161.2 ? 
37 O   ? K HOH . ? B HOH 222 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 227 ? 1_555 81.4  ? 
38 OP1 ? B OMG 2 ? B OMG 2   ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 232 ? 1_555 75.1  ? 
39 O   ? K HOH . ? B HOH 219 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 232 ? 1_555 177.2 ? 
40 O   ? K HOH . ? B HOH 221 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 232 ? 1_555 93.5  ? 
41 O   ? K HOH . ? B HOH 222 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 232 ? 1_555 86.4  ? 
42 O   ? K HOH . ? B HOH 227 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? K HOH . ? B HOH 232 ? 1_555 101.6 ? 
43 O   ? K HOH . ? B HOH 206 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 207 ? 1_555 87.3  ? 
44 O   ? K HOH . ? B HOH 206 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 226 ? 1_555 104.5 ? 
45 O   ? K HOH . ? B HOH 207 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 226 ? 1_555 96.6  ? 
46 O   ? K HOH . ? B HOH 206 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 231 ? 1_555 94.3  ? 
47 O   ? K HOH . ? B HOH 207 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 231 ? 1_555 172.1 ? 
48 O   ? K HOH . ? B HOH 226 ? 1_555 MG ? H MG . ? B MG 105 ? 1_555 O ? K HOH . ? B HOH 231 ? 1_555 90.5  ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2001-09-21 
2 'Structure model' 1 1 2008-04-27 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2023-08-09 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
6 4 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom                
2 4 'Structure model' chem_comp_bond                
3 4 'Structure model' database_2                    
4 4 'Structure model' diffrn_source                 
5 4 'Structure model' pdbx_initial_refinement_model 
6 4 'Structure model' pdbx_struct_conn_angle        
7 4 'Structure model' struct_conn                   
8 4 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                        
2  4 'Structure model' '_database_2.pdbx_database_accession'         
3  4 'Structure model' '_diffrn_source.pdbx_synchrotron_site'        
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
5  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
6  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
7  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
8  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
9  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'      
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'  
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'   
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'      
23 4 'Structure model' '_pdbx_struct_conn_angle.value'               
24 4 'Structure model' '_struct_conn.pdbx_dist_value'                
25 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'         
26 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
33 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
34 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
35 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
36 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
37 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
38 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
39 4 'Structure model' '_struct_conn.ptnr2_symmetry'                 
40 4 'Structure model' '_struct_site.pdbx_auth_asym_id'              
41 4 'Structure model' '_struct_site.pdbx_auth_comp_id'              
42 4 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
AMoRE     phasing          . ? 1 
SHELXL-97 refinement       . ? 2 
DENZO     'data reduction' . ? 3 
SCALEPACK 'data scaling'   . ? 4 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
HOH O      O  N N 1   
HOH H1     H  N N 2   
HOH H2     H  N N 3   
MG  MG     MG N N 4   
MPD C1     C  N N 5   
MPD C2     C  N N 6   
MPD O2     O  N N 7   
MPD CM     C  N N 8   
MPD C3     C  N N 9   
MPD C4     C  N S 10  
MPD O4     O  N N 11  
MPD C5     C  N N 12  
MPD H11    H  N N 13  
MPD H12    H  N N 14  
MPD H13    H  N N 15  
MPD HO2    H  N N 16  
MPD HM1    H  N N 17  
MPD HM2    H  N N 18  
MPD HM3    H  N N 19  
MPD H31    H  N N 20  
MPD H32    H  N N 21  
MPD H4     H  N N 22  
MPD HO4    H  N N 23  
MPD H51    H  N N 24  
MPD H52    H  N N 25  
MPD H53    H  N N 26  
OMC N1     N  N N 27  
OMC C2     C  N N 28  
OMC N3     N  N N 29  
OMC C4     C  N N 30  
OMC C5     C  N N 31  
OMC C6     C  N N 32  
OMC O2     O  N N 33  
OMC N4     N  N N 34  
OMC "C1'"  C  N R 35  
OMC "C2'"  C  N R 36  
OMC "O2'"  O  N N 37  
OMC CM2    C  N N 38  
OMC "C3'"  C  N R 39  
OMC "C4'"  C  N R 40  
OMC "O4'"  O  N N 41  
OMC "O3'"  O  N N 42  
OMC "C5'"  C  N N 43  
OMC "O5'"  O  N N 44  
OMC P      P  N N 45  
OMC OP1    O  N N 46  
OMC OP2    O  N N 47  
OMC OP3    O  N N 48  
OMC H5     H  N N 49  
OMC H6     H  N N 50  
OMC HN41   H  N N 51  
OMC HN42   H  N N 52  
OMC "H1'"  H  N N 53  
OMC "H2'"  H  N N 54  
OMC HM21   H  N N 55  
OMC HM22   H  N N 56  
OMC HM23   H  N N 57  
OMC "H3'"  H  N N 58  
OMC "H4'"  H  N N 59  
OMC "HO3'" H  N N 60  
OMC "H5'"  H  N N 61  
OMC "H5''" H  N N 62  
OMC HOP2   H  N N 63  
OMC HOP3   H  N N 64  
OMG P      P  N N 65  
OMG OP1    O  N N 66  
OMG OP2    O  N N 67  
OMG OP3    O  N N 68  
OMG "O5'"  O  N N 69  
OMG "C5'"  C  N N 70  
OMG "C4'"  C  N R 71  
OMG "O4'"  O  N N 72  
OMG "C3'"  C  N R 73  
OMG "O3'"  O  N N 74  
OMG "C2'"  C  N R 75  
OMG "O2'"  O  N N 76  
OMG CM2    C  N N 77  
OMG "C1'"  C  N R 78  
OMG N9     N  Y N 79  
OMG C8     C  Y N 80  
OMG N7     N  Y N 81  
OMG C5     C  Y N 82  
OMG C6     C  N N 83  
OMG O6     O  N N 84  
OMG N1     N  N N 85  
OMG C2     C  N N 86  
OMG N2     N  N N 87  
OMG N3     N  N N 88  
OMG C4     C  Y N 89  
OMG HOP2   H  N N 90  
OMG HOP3   H  N N 91  
OMG "H5'"  H  N N 92  
OMG "H5''" H  N N 93  
OMG "H4'"  H  N N 94  
OMG "H3'"  H  N N 95  
OMG "HO3'" H  N N 96  
OMG "H2'"  H  N N 97  
OMG HM21   H  N N 98  
OMG HM22   H  N N 99  
OMG HM23   H  N N 100 
OMG "H1'"  H  N N 101 
OMG H8     H  N N 102 
OMG HN1    H  N N 103 
OMG HN21   H  N N 104 
OMG HN22   H  N N 105 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HOH O     H1     sing N N 1   
HOH O     H2     sing N N 2   
MPD C1    C2     sing N N 3   
MPD C1    H11    sing N N 4   
MPD C1    H12    sing N N 5   
MPD C1    H13    sing N N 6   
MPD C2    O2     sing N N 7   
MPD C2    CM     sing N N 8   
MPD C2    C3     sing N N 9   
MPD O2    HO2    sing N N 10  
MPD CM    HM1    sing N N 11  
MPD CM    HM2    sing N N 12  
MPD CM    HM3    sing N N 13  
MPD C3    C4     sing N N 14  
MPD C3    H31    sing N N 15  
MPD C3    H32    sing N N 16  
MPD C4    O4     sing N N 17  
MPD C4    C5     sing N N 18  
MPD C4    H4     sing N N 19  
MPD O4    HO4    sing N N 20  
MPD C5    H51    sing N N 21  
MPD C5    H52    sing N N 22  
MPD C5    H53    sing N N 23  
OMC N1    C2     sing N N 24  
OMC N1    C6     sing N N 25  
OMC N1    "C1'"  sing N N 26  
OMC C2    N3     sing N N 27  
OMC C2    O2     doub N N 28  
OMC N3    C4     doub N N 29  
OMC C4    C5     sing N N 30  
OMC C4    N4     sing N N 31  
OMC C5    C6     doub N N 32  
OMC C5    H5     sing N N 33  
OMC C6    H6     sing N N 34  
OMC N4    HN41   sing N N 35  
OMC N4    HN42   sing N N 36  
OMC "C1'" "C2'"  sing N N 37  
OMC "C1'" "O4'"  sing N N 38  
OMC "C1'" "H1'"  sing N N 39  
OMC "C2'" "O2'"  sing N N 40  
OMC "C2'" "C3'"  sing N N 41  
OMC "C2'" "H2'"  sing N N 42  
OMC "O2'" CM2    sing N N 43  
OMC CM2   HM21   sing N N 44  
OMC CM2   HM22   sing N N 45  
OMC CM2   HM23   sing N N 46  
OMC "C3'" "C4'"  sing N N 47  
OMC "C3'" "O3'"  sing N N 48  
OMC "C3'" "H3'"  sing N N 49  
OMC "C4'" "O4'"  sing N N 50  
OMC "C4'" "C5'"  sing N N 51  
OMC "C4'" "H4'"  sing N N 52  
OMC "O3'" "HO3'" sing N N 53  
OMC "C5'" "O5'"  sing N N 54  
OMC "C5'" "H5'"  sing N N 55  
OMC "C5'" "H5''" sing N N 56  
OMC "O5'" P      sing N N 57  
OMC P     OP1    doub N N 58  
OMC P     OP2    sing N N 59  
OMC P     OP3    sing N N 60  
OMC OP2   HOP2   sing N N 61  
OMC OP3   HOP3   sing N N 62  
OMG P     OP1    doub N N 63  
OMG P     OP2    sing N N 64  
OMG P     OP3    sing N N 65  
OMG P     "O5'"  sing N N 66  
OMG OP2   HOP2   sing N N 67  
OMG OP3   HOP3   sing N N 68  
OMG "O5'" "C5'"  sing N N 69  
OMG "C5'" "C4'"  sing N N 70  
OMG "C5'" "H5'"  sing N N 71  
OMG "C5'" "H5''" sing N N 72  
OMG "C4'" "O4'"  sing N N 73  
OMG "C4'" "C3'"  sing N N 74  
OMG "C4'" "H4'"  sing N N 75  
OMG "O4'" "C1'"  sing N N 76  
OMG "C3'" "O3'"  sing N N 77  
OMG "C3'" "C2'"  sing N N 78  
OMG "C3'" "H3'"  sing N N 79  
OMG "O3'" "HO3'" sing N N 80  
OMG "C2'" "O2'"  sing N N 81  
OMG "C2'" "C1'"  sing N N 82  
OMG "C2'" "H2'"  sing N N 83  
OMG "O2'" CM2    sing N N 84  
OMG CM2   HM21   sing N N 85  
OMG CM2   HM22   sing N N 86  
OMG CM2   HM23   sing N N 87  
OMG "C1'" N9     sing N N 88  
OMG "C1'" "H1'"  sing N N 89  
OMG N9    C8     sing Y N 90  
OMG N9    C4     sing Y N 91  
OMG C8    N7     doub Y N 92  
OMG C8    H8     sing N N 93  
OMG N7    C5     sing Y N 94  
OMG C5    C6     sing N N 95  
OMG C5    C4     doub Y N 96  
OMG C6    O6     doub N N 97  
OMG C6    N1     sing N N 98  
OMG N1    C2     sing N N 99  
OMG N1    HN1    sing N N 100 
OMG C2    N2     sing N N 101 
OMG C2    N3     doub N N 102 
OMG N2    HN21   sing N N 103 
OMG N2    HN22   sing N N 104 
OMG N3    C4     sing N N 105 
# 
_ndb_struct_conf_na.entry_id   1I7J 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A OMC 1 1_555 B OMG 6 1_555 0.028  -0.068 -0.065 9.032  -16.361 -2.306 1 A_OMC1:OMG6_B A 1 ? B 6 ? 19 1 
1 A OMG 2 1_555 B OMC 5 1_555 -0.183 -0.141 0.268  6.930  -13.356 -0.442 2 A_OMG2:OMC5_B A 2 ? B 5 ? 19 1 
1 A OMC 3 1_555 B OMG 4 1_555 0.195  -0.148 -0.074 3.680  -15.822 -1.232 3 A_OMC3:OMG4_B A 3 ? B 4 ? 19 1 
1 A OMG 4 1_555 B OMC 3 1_555 -0.155 -0.176 -0.044 -3.036 -15.390 -1.537 4 A_OMG4:OMC3_B A 4 ? B 3 ? 19 1 
1 A OMC 5 1_555 B OMG 2 1_555 0.151  -0.145 0.120  -5.489 -14.397 -1.409 5 A_OMC5:OMG2_B A 5 ? B 2 ? 19 1 
1 A OMG 6 1_555 B OMC 1 1_555 -0.041 -0.123 -0.009 -8.044 -17.141 -3.630 6 A_OMG6:OMC1_B A 6 ? B 1 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A OMC 1 1_555 B OMG 6 1_555 A OMG 2 1_555 B OMC 5 1_555 -0.374 -1.817 3.133 -7.429 15.004 32.300 -4.719 -0.292 2.143 24.985 
12.371 36.279 1 AA_OMC1OMG2:OMC5OMG6_BB A 1 ? B 6 ? A 2 ? B 5 ? 
1 A OMG 2 1_555 B OMC 5 1_555 A OMC 3 1_555 B OMG 4 1_555 -0.580 -1.419 3.295 0.447  10.373 34.917 -3.641 0.988  2.767 16.833 
-0.725 36.382 2 AA_OMG2OMC3:OMG4OMC5_BB A 2 ? B 5 ? A 3 ? B 4 ? 
1 A OMC 3 1_555 B OMG 4 1_555 A OMG 4 1_555 B OMC 3 1_555 -0.015 -1.672 3.233 -0.411 19.895 30.766 -5.004 -0.024 1.849 33.469 
0.691  36.510 3 AA_OMC3OMG4:OMC3OMG4_BB A 3 ? B 4 ? A 4 ? B 3 ? 
1 A OMG 4 1_555 B OMC 3 1_555 A OMC 5 1_555 B OMG 2 1_555 0.544  -1.412 3.276 1.107  10.495 34.372 -3.706 -0.733 2.756 17.261 
-1.821 35.909 4 AA_OMG4OMC5:OMG2OMC3_BB A 4 ? B 3 ? A 5 ? B 2 ? 
1 A OMC 5 1_555 B OMG 2 1_555 A OMG 6 1_555 B OMC 1 1_555 0.386  -1.819 3.162 5.835  15.419 32.310 -4.798 0.086  2.140 25.724 
-9.735 36.173 5 AA_OMC5OMG6:OMC1OMG2_BB A 5 ? B 2 ? A 6 ? B 1 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'MAGNESIUM ION'                 MG  
3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 
4 water                           HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   310D 
_pdbx_initial_refinement_model.details          'PDB 310D' 
#