data_1IDA # _entry.id 1IDA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IDA pdb_00001ida 10.2210/pdb1ida/pdb WWPDB D_1000174106 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-01-26 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2019-07-17 6 'Structure model' 1 5 2019-08-14 7 'Structure model' 1 6 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Source and taxonomy' 7 3 'Structure model' 'Structure summary' 8 3 'Structure model' 'Version format compliance' 9 4 'Structure model' Other 10 5 'Structure model' 'Data collection' 11 5 'Structure model' Other 12 5 'Structure model' 'Refinement description' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Refinement description' 15 7 'Structure model' 'Data collection' 16 7 'Structure model' 'Database references' 17 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_database_status 2 5 'Structure model' software 3 6 'Structure model' software 4 7 'Structure model' chem_comp_atom 5 7 'Structure model' chem_comp_bond 6 7 'Structure model' database_2 7 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_software.classification' 3 6 'Structure model' '_software.classification' 4 7 'Structure model' '_database_2.pdbx_DOI' 5 7 'Structure model' '_database_2.pdbx_database_accession' 6 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IDA _pdbx_database_status.recvd_initial_deposition_date 1994-10-19 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1IDB _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tong, L.' 1 'Anderson, P.C.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structures of HIV-2 protease in complex with inhibitors containing the hydroxyethylamine dipeptide isostere.' Structure 3 33 40 1995 STRUE6 UK 0969-2126 2005 ? 7743130 '10.1016/S0969-2126(01)00133-2' 1 ;Crystal Structure of Human Immunodeficiency Virus (HIV) Type 2 Protease in Complex with a Reduced Amide Inhibitor and Comparison with HIV-1 Protease Structures ; Proc.Natl.Acad.Sci.USA 90 8387 ? 1993 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tong, L.' 1 ? primary 'Pav, S.' 2 ? primary 'Mui, S.' 3 ? primary 'Lamarre, D.' 4 ? primary 'Yoakim, C.' 5 ? primary 'Beaulieu, P.' 6 ? primary 'Anderson, P.C.' 7 ? 1 'Tong, L.' 8 ? 1 'Pav, S.' 9 ? 1 'Pargellis, C.' 10 ? 1 'Do, F.' 11 ? 1 'Lamarre, D.' 12 ? 1 'Anderson, P.C.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10728.337 2 3.4.23.47 ? 'rsidues 514-622' ? 2 non-polymer syn ;N-[(1R)-1-{[(1S,2S)-1-benzyl-3-{(2R,4S)-2-(tert-butylcarbamoyl)-4-[(pyridin-3-ylmethyl)sulfanyl]piperidin-1-yl}-2-hydroxypropyl]carbamoyl}-2-methylpropyl]quinoline-2-carboxamide ; 724.954 1 ? ? ? ? 3 water nat water 18.015 113 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Retropepsin, PR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLNKKVRATIMTGDT PINIFGRNILTALGMSLNL ; _entity_poly.pdbx_seq_one_letter_code_can ;PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLNKKVRATIMTGDT PINIFGRNILTALGMSLNL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N-[(1R)-1-{[(1S,2S)-1-benzyl-3-{(2R,4S)-2-(tert-butylcarbamoyl)-4-[(pyridin-3-ylmethyl)sulfanyl]piperidin-1-yl}-2-hydroxypropyl]carbamoyl}-2-methylpropyl]quinoline-2-carboxamide ; 0PO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 PHE n 1 4 SER n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 VAL n 1 11 VAL n 1 12 THR n 1 13 ALA n 1 14 TYR n 1 15 ILE n 1 16 GLU n 1 17 GLY n 1 18 GLN n 1 19 PRO n 1 20 VAL n 1 21 GLU n 1 22 VAL n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 SER n 1 32 ILE n 1 33 VAL n 1 34 ALA n 1 35 GLY n 1 36 ILE n 1 37 GLU n 1 38 LEU n 1 39 GLY n 1 40 ASN n 1 41 ASN n 1 42 TYR n 1 43 SER n 1 44 PRO n 1 45 LYS n 1 46 ILE n 1 47 VAL n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 ASN n 1 56 THR n 1 57 LYS n 1 58 GLU n 1 59 TYR n 1 60 LYS n 1 61 ASN n 1 62 VAL n 1 63 GLU n 1 64 ILE n 1 65 GLU n 1 66 VAL n 1 67 LEU n 1 68 ASN n 1 69 LYS n 1 70 LYS n 1 71 VAL n 1 72 ARG n 1 73 ALA n 1 74 THR n 1 75 ILE n 1 76 MET n 1 77 THR n 1 78 GLY n 1 79 ASP n 1 80 THR n 1 81 PRO n 1 82 ILE n 1 83 ASN n 1 84 ILE n 1 85 PHE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 ILE n 1 90 LEU n 1 91 THR n 1 92 ALA n 1 93 LEU n 1 94 GLY n 1 95 MET n 1 96 SER n 1 97 LEU n 1 98 ASN n 1 99 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HIV-2 _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene gag-pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11709 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0PO peptide-like . ;N-[(1R)-1-{[(1S,2S)-1-benzyl-3-{(2R,4S)-2-(tert-butylcarbamoyl)-4-[(pyridin-3-ylmethyl)sulfanyl]piperidin-1-yl}-2-hydroxypropyl]carbamoyl}-2-methylpropyl]quinoline-2-carboxamide ; ? 'C41 H52 N6 O4 S' 724.954 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 LEU 99 99 99 LEU LEU A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 PHE 3 3 3 PHE PHE B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ILE 46 46 46 ILE ILE B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 LYS 57 57 57 LYS LYS B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 MET 76 76 76 MET MET B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 ASP 79 79 79 ASP ASP B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 MET 95 95 95 MET MET B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 LEU 99 99 99 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0PO 1 100 1 0PO QND B . D 3 HOH 1 302 302 HOH HOH A . D 3 HOH 2 308 308 HOH HOH A . D 3 HOH 3 309 309 HOH HOH A . D 3 HOH 4 310 310 HOH HOH A . D 3 HOH 5 313 313 HOH HOH A . D 3 HOH 6 316 316 HOH HOH A . D 3 HOH 7 317 317 HOH HOH A . D 3 HOH 8 321 321 HOH HOH A . D 3 HOH 9 323 323 HOH HOH A . D 3 HOH 10 326 326 HOH HOH A . D 3 HOH 11 327 327 HOH HOH A . D 3 HOH 12 331 331 HOH HOH A . D 3 HOH 13 332 332 HOH HOH A . D 3 HOH 14 333 333 HOH HOH A . D 3 HOH 15 335 335 HOH HOH A . D 3 HOH 16 336 336 HOH HOH A . D 3 HOH 17 339 339 HOH HOH A . D 3 HOH 18 342 342 HOH HOH A . D 3 HOH 19 343 343 HOH HOH A . D 3 HOH 20 346 346 HOH HOH A . D 3 HOH 21 347 347 HOH HOH A . D 3 HOH 22 348 348 HOH HOH A . D 3 HOH 23 356 356 HOH HOH A . D 3 HOH 24 358 358 HOH HOH A . D 3 HOH 25 359 359 HOH HOH A . D 3 HOH 26 360 360 HOH HOH A . D 3 HOH 27 363 363 HOH HOH A . D 3 HOH 28 365 365 HOH HOH A . D 3 HOH 29 366 366 HOH HOH A . D 3 HOH 30 367 367 HOH HOH A . D 3 HOH 31 371 371 HOH HOH A . D 3 HOH 32 374 374 HOH HOH A . D 3 HOH 33 375 375 HOH HOH A . D 3 HOH 34 376 376 HOH HOH A . D 3 HOH 35 379 379 HOH HOH A . D 3 HOH 36 381 381 HOH HOH A . D 3 HOH 37 384 384 HOH HOH A . D 3 HOH 38 385 385 HOH HOH A . D 3 HOH 39 387 387 HOH HOH A . D 3 HOH 40 390 390 HOH HOH A . D 3 HOH 41 394 394 HOH HOH A . D 3 HOH 42 395 395 HOH HOH A . D 3 HOH 43 398 398 HOH HOH A . D 3 HOH 44 401 401 HOH HOH A . D 3 HOH 45 408 408 HOH HOH A . D 3 HOH 46 410 410 HOH HOH A . D 3 HOH 47 412 412 HOH HOH A . D 3 HOH 48 415 415 HOH HOH A . E 3 HOH 1 301 301 HOH HOH B . E 3 HOH 2 303 303 HOH HOH B . E 3 HOH 3 304 304 HOH HOH B . E 3 HOH 4 305 305 HOH HOH B . E 3 HOH 5 306 306 HOH HOH B . E 3 HOH 6 307 307 HOH HOH B . E 3 HOH 7 311 311 HOH HOH B . E 3 HOH 8 312 312 HOH HOH B . E 3 HOH 9 314 314 HOH HOH B . E 3 HOH 10 315 315 HOH HOH B . E 3 HOH 11 318 318 HOH HOH B . E 3 HOH 12 319 319 HOH HOH B . E 3 HOH 13 320 320 HOH HOH B . E 3 HOH 14 322 322 HOH HOH B . E 3 HOH 15 324 324 HOH HOH B . E 3 HOH 16 325 325 HOH HOH B . E 3 HOH 17 328 328 HOH HOH B . E 3 HOH 18 329 329 HOH HOH B . E 3 HOH 19 330 330 HOH HOH B . E 3 HOH 20 334 334 HOH HOH B . E 3 HOH 21 337 337 HOH HOH B . E 3 HOH 22 338 338 HOH HOH B . E 3 HOH 23 340 340 HOH HOH B . E 3 HOH 24 341 341 HOH HOH B . E 3 HOH 25 344 344 HOH HOH B . E 3 HOH 26 345 345 HOH HOH B . E 3 HOH 27 349 349 HOH HOH B . E 3 HOH 28 350 350 HOH HOH B . E 3 HOH 29 351 351 HOH HOH B . E 3 HOH 30 352 352 HOH HOH B . E 3 HOH 31 353 353 HOH HOH B . E 3 HOH 32 354 354 HOH HOH B . E 3 HOH 33 355 355 HOH HOH B . E 3 HOH 34 357 357 HOH HOH B . E 3 HOH 35 361 361 HOH HOH B . E 3 HOH 36 362 362 HOH HOH B . E 3 HOH 37 364 364 HOH HOH B . E 3 HOH 38 368 368 HOH HOH B . E 3 HOH 39 369 369 HOH HOH B . E 3 HOH 40 370 370 HOH HOH B . E 3 HOH 41 372 372 HOH HOH B . E 3 HOH 42 373 373 HOH HOH B . E 3 HOH 43 377 377 HOH HOH B . E 3 HOH 44 378 378 HOH HOH B . E 3 HOH 45 380 380 HOH HOH B . E 3 HOH 46 382 382 HOH HOH B . E 3 HOH 47 383 383 HOH HOH B . E 3 HOH 48 386 386 HOH HOH B . E 3 HOH 49 388 388 HOH HOH B . E 3 HOH 50 389 389 HOH HOH B . E 3 HOH 51 391 391 HOH HOH B . E 3 HOH 52 392 392 HOH HOH B . E 3 HOH 53 393 393 HOH HOH B . E 3 HOH 54 396 396 HOH HOH B . E 3 HOH 55 399 399 HOH HOH B . E 3 HOH 56 402 402 HOH HOH B . E 3 HOH 57 403 403 HOH HOH B . E 3 HOH 58 404 404 HOH HOH B . E 3 HOH 59 405 405 HOH HOH B . E 3 HOH 60 406 406 HOH HOH B . E 3 HOH 61 407 407 HOH HOH B . E 3 HOH 62 409 409 HOH HOH B . E 3 HOH 63 411 411 HOH HOH B . E 3 HOH 64 413 413 HOH HOH B . E 3 HOH 65 414 414 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 TNT refinement . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1IDA _cell.length_a 62.600 _cell.length_b 62.600 _cell.length_c 115.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1IDA _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1IDA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1IDA _refine.ls_number_reflns_obs 22017 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1960000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1960000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1510 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 1675 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.6 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1IDA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IDA _struct.title 'CRYSTAL STRUCTURES OF HIV-2 PROTEASE IN COMPLEX WITH INHIBITORS CONTAINING THE HYDROXYETHYLAMINE DIPEPTIDE ISOSTERE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IDA _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'ACID PROTEINASE, AIDS, Protease, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV2RO _struct_ref.pdbx_db_accession P04584 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLNKKVRATIMTGDT PINIFGRNILTALGMSLNL ; _struct_ref.pdbx_align_begin 514 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IDA A 1 ? 99 ? P04584 514 ? 612 ? 1 99 2 1 1IDA B 1 ? 99 ? P04584 514 ? 612 ? 1 99 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5480 ? 1 MORE -15 ? 1 'SSA (A^2)' 9200 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? GLY A 94 ? GLY A 86 GLY A 94 1 ? 9 HELX_P HELX_P2 2 GLY B 86 ? GLY B 94 ? GLY B 86 GLY B 94 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? SER A 4 ? GLN A 2 SER A 4 A 2 SER B 96 ? ASN B 98 ? SER B 96 ASN B 98 A 3 SER A 96 ? ASN A 98 ? SER A 96 ASN A 98 A 4 GLN B 2 ? PHE B 3 ? GLN B 2 PHE B 3 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 3 ? N PHE A 3 O LEU B 97 ? O LEU B 97 A 2 3 N ASN B 98 ? N ASN B 98 O SER A 96 ? O SER A 96 A 3 4 O LEU A 97 ? O LEU A 97 N PHE B 3 ? N PHE B 3 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id 0PO _struct_site.pdbx_auth_seq_id 100 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE 0PO B 100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 8 ? ARG A 8 . ? 1_555 ? 2 AC1 17 ASP A 25 ? ASP A 25 . ? 1_555 ? 3 AC1 17 ASP A 30 ? ASP A 30 . ? 1_555 ? 4 AC1 17 GLY A 48 ? GLY A 48 . ? 1_555 ? 5 AC1 17 GLY A 49 ? GLY A 49 . ? 1_555 ? 6 AC1 17 PRO A 81 ? PRO A 81 . ? 1_555 ? 7 AC1 17 ASP B 25 ? ASP B 25 . ? 1_555 ? 8 AC1 17 GLY B 27 ? GLY B 27 . ? 1_555 ? 9 AC1 17 ALA B 28 ? ALA B 28 . ? 1_555 ? 10 AC1 17 ASP B 29 ? ASP B 29 . ? 1_555 ? 11 AC1 17 GLY B 48 ? GLY B 48 . ? 1_555 ? 12 AC1 17 ILE B 50 ? ILE B 50 . ? 1_555 ? 13 AC1 17 PRO B 81 ? PRO B 81 . ? 1_555 ? 14 AC1 17 ILE B 82 ? ILE B 82 . ? 1_555 ? 15 AC1 17 ILE B 84 ? ILE B 84 . ? 1_555 ? 16 AC1 17 HOH E . ? HOH B 301 . ? 1_555 ? 17 AC1 17 HOH E . ? HOH B 311 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 16 ? ? OE2 A GLU 16 ? ? 1.320 1.252 0.068 0.011 N 2 1 CD A GLU 21 ? ? OE2 A GLU 21 ? ? 1.337 1.252 0.085 0.011 N 3 1 CD A GLU 37 ? ? OE2 A GLU 37 ? ? 1.342 1.252 0.090 0.011 N 4 1 CD A GLU 63 ? ? OE1 A GLU 63 ? ? 1.337 1.252 0.085 0.011 N 5 1 CD A GLU 65 ? ? OE1 A GLU 65 ? ? 1.338 1.252 0.086 0.011 N 6 1 CD B GLU 16 ? ? OE1 B GLU 16 ? ? 1.340 1.252 0.088 0.011 N 7 1 CD B GLU 21 ? ? OE2 B GLU 21 ? ? 1.335 1.252 0.083 0.011 N 8 1 CD B GLU 37 ? ? OE1 B GLU 37 ? ? 1.329 1.252 0.077 0.011 N 9 1 CD B GLU 58 ? ? OE2 B GLU 58 ? ? 1.324 1.252 0.072 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 128.92 120.30 8.62 0.50 N 2 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 110.89 120.30 -9.41 0.50 N 3 1 CB A ASP 25 ? ? CG A ASP 25 ? ? OD1 A ASP 25 ? ? 111.84 118.30 -6.46 0.90 N 4 1 CB A ASP 25 ? ? CG A ASP 25 ? ? OD2 A ASP 25 ? ? 125.59 118.30 7.29 0.90 N 5 1 CB A ASP 29 ? ? CG A ASP 29 ? ? OD1 A ASP 29 ? ? 125.82 118.30 7.52 0.90 N 6 1 CB A ASP 29 ? ? CG A ASP 29 ? ? OD2 A ASP 29 ? ? 108.56 118.30 -9.74 0.90 N 7 1 N A SER 43 ? ? CA A SER 43 ? ? CB A SER 43 ? ? 120.36 110.50 9.86 1.50 N 8 1 N A ASP 79 ? ? CA A ASP 79 ? ? CB A ASP 79 ? ? 121.65 110.60 11.05 1.80 N 9 1 CB A ASP 79 ? ? CG A ASP 79 ? ? OD1 A ASP 79 ? ? 112.48 118.30 -5.82 0.90 N 10 1 CB B ASP 25 ? ? CG B ASP 25 ? ? OD1 B ASP 25 ? ? 124.06 118.30 5.76 0.90 N 11 1 CB B ASP 25 ? ? CG B ASP 25 ? ? OD2 B ASP 25 ? ? 111.14 118.30 -7.16 0.90 N 12 1 CA B ILE 46 ? ? CB B ILE 46 ? ? CG2 B ILE 46 ? ? 123.50 110.90 12.60 2.00 N 13 1 CG1 B VAL 71 ? ? CB B VAL 71 ? ? CG2 B VAL 71 ? ? 120.89 110.90 9.99 1.60 N 14 1 CB B ASP 79 ? ? CG B ASP 79 ? ? OD1 B ASP 79 ? ? 112.59 118.30 -5.71 0.90 N 15 1 CB B ASP 79 ? ? CG B ASP 79 ? ? OD2 B ASP 79 ? ? 124.03 118.30 5.73 0.90 N # _pdbx_molecule_features.prd_id PRD_000340 _pdbx_molecule_features.name ;N-[(1R)-1-{[(1S,2S)-1-benzyl-3-{(2R,4S)-2-(tert-butylcarbamoyl)-4-[(pyridin-3-ylmethyl)sulfanyl]piperidin-1-yl}- 2-hydroxypropyl]carbamoyl}-2-methylpropyl]quinoline-2-carboxamide ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000340 _pdbx_molecule.asym_id C # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0PO C C N N 1 0PO O1 O N N 2 0PO N1 N Y N 3 0PO C2 C Y N 4 0PO C3 C Y N 5 0PO C4 C Y N 6 0PO C5 C Y N 7 0PO C6 C Y N 8 0PO C7 C Y N 9 0PO C8 C Y N 10 0PO C9 C Y N 11 0PO C10 C Y N 12 0PO N N N N 13 0PO CA C N S 14 0PO C1 C N N 15 0PO O O N N 16 0PO CB C N N 17 0PO CG1 C N N 18 0PO CG2 C N N 19 0PO N2 N N N 20 0PO CA1 C N S 21 0PO CC C N R 22 0PO OXT O N N 23 0PO CB1 C N N 24 0PO CG C Y N 25 0PO CD1 C Y N 26 0PO CD2 C Y N 27 0PO CE1 C Y N 28 0PO CE2 C Y N 29 0PO CZ C Y N 30 0PO CM C N N 31 0PO N11 N N N 32 0PO C21 C N S 33 0PO C31 C N N 34 0PO C41 C N R 35 0PO C51 C N N 36 0PO C61 C N N 37 0PO CD C N N 38 0PO O2 O N N 39 0PO N12 N Y N 40 0PO C22 C Y N 41 0PO C32 C Y N 42 0PO C42 C Y N 43 0PO C52 C Y N 44 0PO C62 C Y N 45 0PO CE C N N 46 0PO S S N N 47 0PO N3 N N N 48 0PO "C1'" C N N 49 0PO "C2'" C N N 50 0PO "C3'" C N N 51 0PO "C4'" C N N 52 0PO H3 H N N 53 0PO H4 H N N 54 0PO H5 H N N 55 0PO H6 H N N 56 0PO H7 H N N 57 0PO H8 H N N 58 0PO H H N N 59 0PO HA H N N 60 0PO HB H N N 61 0PO HG11 H N N 62 0PO HG12 H N N 63 0PO HG13 H N N 64 0PO HG21 H N N 65 0PO HG22 H N N 66 0PO HG23 H N N 67 0PO H1 H N N 68 0PO HA1 H N N 69 0PO HC H N N 70 0PO HOR H N N 71 0PO HB2 H N N 72 0PO HB3 H N N 73 0PO HD1 H N N 74 0PO HD2 H N N 75 0PO HE1 H N N 76 0PO HE2 H N N 77 0PO HZ H N N 78 0PO HM1 H N N 79 0PO HM2 H N N 80 0PO H2 H N N 81 0PO H31 H N N 82 0PO H32 H N N 83 0PO H41 H N N 84 0PO H51 H N N 85 0PO H52 H N N 86 0PO H61 H N N 87 0PO H62 H N N 88 0PO H21 H N N 89 0PO H42 H N N 90 0PO H53 H N N 91 0PO H63 H N N 92 0PO H11 H N N 93 0PO H2A H N N 94 0PO HN H N N 95 0PO "H2'1" H N N 96 0PO "H2'2" H N N 97 0PO "H2'3" H N N 98 0PO "H3'1" H N N 99 0PO "H3'2" H N N 100 0PO "H3'3" H N N 101 0PO "H4'1" H N N 102 0PO "H4'2" H N N 103 0PO "H4'3" H N N 104 ALA N N N N 105 ALA CA C N S 106 ALA C C N N 107 ALA O O N N 108 ALA CB C N N 109 ALA OXT O N N 110 ALA H H N N 111 ALA H2 H N N 112 ALA HA H N N 113 ALA HB1 H N N 114 ALA HB2 H N N 115 ALA HB3 H N N 116 ALA HXT H N N 117 ARG N N N N 118 ARG CA C N S 119 ARG C C N N 120 ARG O O N N 121 ARG CB C N N 122 ARG CG C N N 123 ARG CD C N N 124 ARG NE N N N 125 ARG CZ C N N 126 ARG NH1 N N N 127 ARG NH2 N N N 128 ARG OXT O N N 129 ARG H H N N 130 ARG H2 H N N 131 ARG HA H N N 132 ARG HB2 H N N 133 ARG HB3 H N N 134 ARG HG2 H N N 135 ARG HG3 H N N 136 ARG HD2 H N N 137 ARG HD3 H N N 138 ARG HE H N N 139 ARG HH11 H N N 140 ARG HH12 H N N 141 ARG HH21 H N N 142 ARG HH22 H N N 143 ARG HXT H N N 144 ASN N N N N 145 ASN CA C N S 146 ASN C C N N 147 ASN O O N N 148 ASN CB C N N 149 ASN CG C N N 150 ASN OD1 O N N 151 ASN ND2 N N N 152 ASN OXT O N N 153 ASN H H N N 154 ASN H2 H N N 155 ASN HA H N N 156 ASN HB2 H N N 157 ASN HB3 H N N 158 ASN HD21 H N N 159 ASN HD22 H N N 160 ASN HXT H N N 161 ASP N N N N 162 ASP CA C N S 163 ASP C C N N 164 ASP O O N N 165 ASP CB C N N 166 ASP CG C N N 167 ASP OD1 O N N 168 ASP OD2 O N N 169 ASP OXT O N N 170 ASP H H N N 171 ASP H2 H N N 172 ASP HA H N N 173 ASP HB2 H N N 174 ASP HB3 H N N 175 ASP HD2 H N N 176 ASP HXT H N N 177 GLN N N N N 178 GLN CA C N S 179 GLN C C N N 180 GLN O O N N 181 GLN CB C N N 182 GLN CG C N N 183 GLN CD C N N 184 GLN OE1 O N N 185 GLN NE2 N N N 186 GLN OXT O N N 187 GLN H H N N 188 GLN H2 H N N 189 GLN HA H N N 190 GLN HB2 H N N 191 GLN HB3 H N N 192 GLN HG2 H N N 193 GLN HG3 H N N 194 GLN HE21 H N N 195 GLN HE22 H N N 196 GLN HXT H N N 197 GLU N N N N 198 GLU CA C N S 199 GLU C C N N 200 GLU O O N N 201 GLU CB C N N 202 GLU CG C N N 203 GLU CD C N N 204 GLU OE1 O N N 205 GLU OE2 O N N 206 GLU OXT O N N 207 GLU H H N N 208 GLU H2 H N N 209 GLU HA H N N 210 GLU HB2 H N N 211 GLU HB3 H N N 212 GLU HG2 H N N 213 GLU HG3 H N N 214 GLU HE2 H N N 215 GLU HXT H N N 216 GLY N N N N 217 GLY CA C N N 218 GLY C C N N 219 GLY O O N N 220 GLY OXT O N N 221 GLY H H N N 222 GLY H2 H N N 223 GLY HA2 H N N 224 GLY HA3 H N N 225 GLY HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TRP N N N N 390 TRP CA C N S 391 TRP C C N N 392 TRP O O N N 393 TRP CB C N N 394 TRP CG C Y N 395 TRP CD1 C Y N 396 TRP CD2 C Y N 397 TRP NE1 N Y N 398 TRP CE2 C Y N 399 TRP CE3 C Y N 400 TRP CZ2 C Y N 401 TRP CZ3 C Y N 402 TRP CH2 C Y N 403 TRP OXT O N N 404 TRP H H N N 405 TRP H2 H N N 406 TRP HA H N N 407 TRP HB2 H N N 408 TRP HB3 H N N 409 TRP HD1 H N N 410 TRP HE1 H N N 411 TRP HE3 H N N 412 TRP HZ2 H N N 413 TRP HZ3 H N N 414 TRP HH2 H N N 415 TRP HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 VAL N N N N 441 VAL CA C N S 442 VAL C C N N 443 VAL O O N N 444 VAL CB C N N 445 VAL CG1 C N N 446 VAL CG2 C N N 447 VAL OXT O N N 448 VAL H H N N 449 VAL H2 H N N 450 VAL HA H N N 451 VAL HB H N N 452 VAL HG11 H N N 453 VAL HG12 H N N 454 VAL HG13 H N N 455 VAL HG21 H N N 456 VAL HG22 H N N 457 VAL HG23 H N N 458 VAL HXT H N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0PO N1 C2 doub Y N 1 0PO N1 C10 sing Y N 2 0PO C2 C3 sing Y N 3 0PO C2 C sing N N 4 0PO C3 C4 doub Y N 5 0PO C3 H3 sing N N 6 0PO C4 C9 sing Y N 7 0PO C4 H4 sing N N 8 0PO C5 C6 doub Y N 9 0PO C5 C9 sing Y N 10 0PO C5 H5 sing N N 11 0PO C6 C7 sing Y N 12 0PO C6 H6 sing N N 13 0PO C7 C8 doub Y N 14 0PO C7 H7 sing N N 15 0PO C8 C10 sing Y N 16 0PO C8 H8 sing N N 17 0PO C9 C10 doub Y N 18 0PO C O1 doub N N 19 0PO N CA sing N N 20 0PO N H sing N N 21 0PO CA C1 sing N N 22 0PO CA CB sing N N 23 0PO CA HA sing N N 24 0PO C1 O doub N N 25 0PO CB CG1 sing N N 26 0PO CB CG2 sing N N 27 0PO CB HB sing N N 28 0PO CG1 HG11 sing N N 29 0PO CG1 HG12 sing N N 30 0PO CG1 HG13 sing N N 31 0PO CG2 HG21 sing N N 32 0PO CG2 HG22 sing N N 33 0PO CG2 HG23 sing N N 34 0PO N2 CA1 sing N N 35 0PO N2 H1 sing N N 36 0PO CA1 CC sing N N 37 0PO CA1 CB1 sing N N 38 0PO CA1 HA1 sing N N 39 0PO CC OXT sing N N 40 0PO CC CM sing N N 41 0PO CC HC sing N N 42 0PO OXT HOR sing N N 43 0PO CB1 CG sing N N 44 0PO CB1 HB2 sing N N 45 0PO CB1 HB3 sing N N 46 0PO CG CD1 doub Y N 47 0PO CG CD2 sing Y N 48 0PO CD1 CE1 sing Y N 49 0PO CD1 HD1 sing N N 50 0PO CD2 CE2 doub Y N 51 0PO CD2 HD2 sing N N 52 0PO CE1 CZ doub Y N 53 0PO CE1 HE1 sing N N 54 0PO CE2 CZ sing Y N 55 0PO CE2 HE2 sing N N 56 0PO CZ HZ sing N N 57 0PO CM HM1 sing N N 58 0PO CM HM2 sing N N 59 0PO N11 C21 sing N N 60 0PO N11 C61 sing N N 61 0PO C21 C31 sing N N 62 0PO C21 CD sing N N 63 0PO C21 H2 sing N N 64 0PO C31 C41 sing N N 65 0PO C31 H31 sing N N 66 0PO C31 H32 sing N N 67 0PO C41 C51 sing N N 68 0PO C41 H41 sing N N 69 0PO C51 C61 sing N N 70 0PO C51 H51 sing N N 71 0PO C51 H52 sing N N 72 0PO C61 H61 sing N N 73 0PO C61 H62 sing N N 74 0PO CD O2 doub N N 75 0PO CD N3 sing N N 76 0PO N3 "C1'" sing N N 77 0PO N3 HN sing N N 78 0PO "C1'" "C2'" sing N N 79 0PO "C1'" "C3'" sing N N 80 0PO "C1'" "C4'" sing N N 81 0PO "C2'" "H2'1" sing N N 82 0PO "C2'" "H2'2" sing N N 83 0PO "C2'" "H2'3" sing N N 84 0PO "C3'" "H3'1" sing N N 85 0PO "C3'" "H3'2" sing N N 86 0PO "C3'" "H3'3" sing N N 87 0PO "C4'" "H4'1" sing N N 88 0PO "C4'" "H4'2" sing N N 89 0PO "C4'" "H4'3" sing N N 90 0PO N12 C22 doub Y N 91 0PO N12 C62 sing Y N 92 0PO C22 C32 sing Y N 93 0PO C22 H21 sing N N 94 0PO C32 C42 doub Y N 95 0PO C32 CE sing N N 96 0PO C42 C52 sing Y N 97 0PO C42 H42 sing N N 98 0PO C52 C62 doub Y N 99 0PO C52 H53 sing N N 100 0PO C62 H63 sing N N 101 0PO CE S sing N N 102 0PO CE H11 sing N N 103 0PO CE H2A sing N N 104 0PO C N sing N N 105 0PO C1 N2 sing N N 106 0PO CM N11 sing N N 107 0PO C41 S sing N N 108 ALA N CA sing N N 109 ALA N H sing N N 110 ALA N H2 sing N N 111 ALA CA C sing N N 112 ALA CA CB sing N N 113 ALA CA HA sing N N 114 ALA C O doub N N 115 ALA C OXT sing N N 116 ALA CB HB1 sing N N 117 ALA CB HB2 sing N N 118 ALA CB HB3 sing N N 119 ALA OXT HXT sing N N 120 ARG N CA sing N N 121 ARG N H sing N N 122 ARG N H2 sing N N 123 ARG CA C sing N N 124 ARG CA CB sing N N 125 ARG CA HA sing N N 126 ARG C O doub N N 127 ARG C OXT sing N N 128 ARG CB CG sing N N 129 ARG CB HB2 sing N N 130 ARG CB HB3 sing N N 131 ARG CG CD sing N N 132 ARG CG HG2 sing N N 133 ARG CG HG3 sing N N 134 ARG CD NE sing N N 135 ARG CD HD2 sing N N 136 ARG CD HD3 sing N N 137 ARG NE CZ sing N N 138 ARG NE HE sing N N 139 ARG CZ NH1 sing N N 140 ARG CZ NH2 doub N N 141 ARG NH1 HH11 sing N N 142 ARG NH1 HH12 sing N N 143 ARG NH2 HH21 sing N N 144 ARG NH2 HH22 sing N N 145 ARG OXT HXT sing N N 146 ASN N CA sing N N 147 ASN N H sing N N 148 ASN N H2 sing N N 149 ASN CA C sing N N 150 ASN CA CB sing N N 151 ASN CA HA sing N N 152 ASN C O doub N N 153 ASN C OXT sing N N 154 ASN CB CG sing N N 155 ASN CB HB2 sing N N 156 ASN CB HB3 sing N N 157 ASN CG OD1 doub N N 158 ASN CG ND2 sing N N 159 ASN ND2 HD21 sing N N 160 ASN ND2 HD22 sing N N 161 ASN OXT HXT sing N N 162 ASP N CA sing N N 163 ASP N H sing N N 164 ASP N H2 sing N N 165 ASP CA C sing N N 166 ASP CA CB sing N N 167 ASP CA HA sing N N 168 ASP C O doub N N 169 ASP C OXT sing N N 170 ASP CB CG sing N N 171 ASP CB HB2 sing N N 172 ASP CB HB3 sing N N 173 ASP CG OD1 doub N N 174 ASP CG OD2 sing N N 175 ASP OD2 HD2 sing N N 176 ASP OXT HXT sing N N 177 GLN N CA sing N N 178 GLN N H sing N N 179 GLN N H2 sing N N 180 GLN CA C sing N N 181 GLN CA CB sing N N 182 GLN CA HA sing N N 183 GLN C O doub N N 184 GLN C OXT sing N N 185 GLN CB CG sing N N 186 GLN CB HB2 sing N N 187 GLN CB HB3 sing N N 188 GLN CG CD sing N N 189 GLN CG HG2 sing N N 190 GLN CG HG3 sing N N 191 GLN CD OE1 doub N N 192 GLN CD NE2 sing N N 193 GLN NE2 HE21 sing N N 194 GLN NE2 HE22 sing N N 195 GLN OXT HXT sing N N 196 GLU N CA sing N N 197 GLU N H sing N N 198 GLU N H2 sing N N 199 GLU CA C sing N N 200 GLU CA CB sing N N 201 GLU CA HA sing N N 202 GLU C O doub N N 203 GLU C OXT sing N N 204 GLU CB CG sing N N 205 GLU CB HB2 sing N N 206 GLU CB HB3 sing N N 207 GLU CG CD sing N N 208 GLU CG HG2 sing N N 209 GLU CG HG3 sing N N 210 GLU CD OE1 doub N N 211 GLU CD OE2 sing N N 212 GLU OE2 HE2 sing N N 213 GLU OXT HXT sing N N 214 GLY N CA sing N N 215 GLY N H sing N N 216 GLY N H2 sing N N 217 GLY CA C sing N N 218 GLY CA HA2 sing N N 219 GLY CA HA3 sing N N 220 GLY C O doub N N 221 GLY C OXT sing N N 222 GLY OXT HXT sing N N 223 HOH O H1 sing N N 224 HOH O H2 sing N N 225 ILE N CA sing N N 226 ILE N H sing N N 227 ILE N H2 sing N N 228 ILE CA C sing N N 229 ILE CA CB sing N N 230 ILE CA HA sing N N 231 ILE C O doub N N 232 ILE C OXT sing N N 233 ILE CB CG1 sing N N 234 ILE CB CG2 sing N N 235 ILE CB HB sing N N 236 ILE CG1 CD1 sing N N 237 ILE CG1 HG12 sing N N 238 ILE CG1 HG13 sing N N 239 ILE CG2 HG21 sing N N 240 ILE CG2 HG22 sing N N 241 ILE CG2 HG23 sing N N 242 ILE CD1 HD11 sing N N 243 ILE CD1 HD12 sing N N 244 ILE CD1 HD13 sing N N 245 ILE OXT HXT sing N N 246 LEU N CA sing N N 247 LEU N H sing N N 248 LEU N H2 sing N N 249 LEU CA C sing N N 250 LEU CA CB sing N N 251 LEU CA HA sing N N 252 LEU C O doub N N 253 LEU C OXT sing N N 254 LEU CB CG sing N N 255 LEU CB HB2 sing N N 256 LEU CB HB3 sing N N 257 LEU CG CD1 sing N N 258 LEU CG CD2 sing N N 259 LEU CG HG sing N N 260 LEU CD1 HD11 sing N N 261 LEU CD1 HD12 sing N N 262 LEU CD1 HD13 sing N N 263 LEU CD2 HD21 sing N N 264 LEU CD2 HD22 sing N N 265 LEU CD2 HD23 sing N N 266 LEU OXT HXT sing N N 267 LYS N CA sing N N 268 LYS N H sing N N 269 LYS N H2 sing N N 270 LYS CA C sing N N 271 LYS CA CB sing N N 272 LYS CA HA sing N N 273 LYS C O doub N N 274 LYS C OXT sing N N 275 LYS CB CG sing N N 276 LYS CB HB2 sing N N 277 LYS CB HB3 sing N N 278 LYS CG CD sing N N 279 LYS CG HG2 sing N N 280 LYS CG HG3 sing N N 281 LYS CD CE sing N N 282 LYS CD HD2 sing N N 283 LYS CD HD3 sing N N 284 LYS CE NZ sing N N 285 LYS CE HE2 sing N N 286 LYS CE HE3 sing N N 287 LYS NZ HZ1 sing N N 288 LYS NZ HZ2 sing N N 289 LYS NZ HZ3 sing N N 290 LYS OXT HXT sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PRO N CA sing N N 334 PRO N CD sing N N 335 PRO N H sing N N 336 PRO CA C sing N N 337 PRO CA CB sing N N 338 PRO CA HA sing N N 339 PRO C O doub N N 340 PRO C OXT sing N N 341 PRO CB CG sing N N 342 PRO CB HB2 sing N N 343 PRO CB HB3 sing N N 344 PRO CG CD sing N N 345 PRO CG HG2 sing N N 346 PRO CG HG3 sing N N 347 PRO CD HD2 sing N N 348 PRO CD HD3 sing N N 349 PRO OXT HXT sing N N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # _atom_sites.entry_id 1IDA _atom_sites.fract_transf_matrix[1][1] 0.015974 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015974 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008636 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_