data_1IE0 # _entry.id 1IE0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1IE0 RCSB RCSB013192 WWPDB D_1000013192 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IE0 _pdbx_database_status.recvd_initial_deposition_date 2001-04-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hilgers, M.T.' 1 'Ludwig, M.L.' 2 # _citation.id primary _citation.title 'Crystal structure of the quorum-sensing protein LuxS reveals a catalytic metal site.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 98 _citation.page_first 11169 _citation.page_last 11174 _citation.year 2001 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11553770 _citation.pdbx_database_id_DOI 10.1073/pnas.191223098 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hilgers, M.T.' 1 primary 'Ludwig, M.L.' 2 # _cell.entry_id 1IE0 _cell.length_a 62.732 _cell.length_b 62.732 _cell.length_c 150.140 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IE0 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AUTOINDUCER-2 PRODUCTION PROTEIN LUXS' 17786.229 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 187 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AI-2 SYNTHESIS PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMG(OCS)QTGYYLVVSGEPTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVF G ; _entity_poly.pdbx_seq_one_letter_code_can ;MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMGCQTGYYLVVSGEPTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 SER n 1 4 VAL n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 GLU n 1 9 LEU n 1 10 ASP n 1 11 HIS n 1 12 ASN n 1 13 ALA n 1 14 VAL n 1 15 VAL n 1 16 ALA n 1 17 PRO n 1 18 TYR n 1 19 VAL n 1 20 ARG n 1 21 HIS n 1 22 CYS n 1 23 GLY n 1 24 VAL n 1 25 HIS n 1 26 LYS n 1 27 VAL n 1 28 GLY n 1 29 THR n 1 30 ASP n 1 31 GLY n 1 32 VAL n 1 33 VAL n 1 34 ASN n 1 35 LYS n 1 36 PHE n 1 37 ASP n 1 38 ILE n 1 39 ARG n 1 40 PHE n 1 41 CYS n 1 42 GLN n 1 43 PRO n 1 44 ASN n 1 45 LYS n 1 46 GLN n 1 47 ALA n 1 48 MET n 1 49 LYS n 1 50 PRO n 1 51 ASP n 1 52 THR n 1 53 ILE n 1 54 HIS n 1 55 THR n 1 56 LEU n 1 57 GLU n 1 58 HIS n 1 59 LEU n 1 60 LEU n 1 61 ALA n 1 62 PHE n 1 63 THR n 1 64 ILE n 1 65 ARG n 1 66 SER n 1 67 HIS n 1 68 ALA n 1 69 GLU n 1 70 LYS n 1 71 TYR n 1 72 ASP n 1 73 HIS n 1 74 PHE n 1 75 ASP n 1 76 ILE n 1 77 ILE n 1 78 ASP n 1 79 ILE n 1 80 SER n 1 81 PRO n 1 82 MET n 1 83 GLY n 1 84 OCS n 1 85 GLN n 1 86 THR n 1 87 GLY n 1 88 TYR n 1 89 TYR n 1 90 LEU n 1 91 VAL n 1 92 VAL n 1 93 SER n 1 94 GLY n 1 95 GLU n 1 96 PRO n 1 97 THR n 1 98 SER n 1 99 ALA n 1 100 GLU n 1 101 ILE n 1 102 VAL n 1 103 ASP n 1 104 LEU n 1 105 LEU n 1 106 GLU n 1 107 ASP n 1 108 THR n 1 109 MET n 1 110 LYS n 1 111 GLU n 1 112 ALA n 1 113 VAL n 1 114 GLU n 1 115 ILE n 1 116 THR n 1 117 GLU n 1 118 ILE n 1 119 PRO n 1 120 ALA n 1 121 ALA n 1 122 ASN n 1 123 GLU n 1 124 LYS n 1 125 GLN n 1 126 CYS n 1 127 GLY n 1 128 GLN n 1 129 ALA n 1 130 LYS n 1 131 LEU n 1 132 HIS n 1 133 ASP n 1 134 LEU n 1 135 GLU n 1 136 GLY n 1 137 ALA n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 MET n 1 142 ARG n 1 143 PHE n 1 144 TRP n 1 145 LEU n 1 146 SER n 1 147 GLN n 1 148 ASP n 1 149 LYS n 1 150 GLU n 1 151 GLU n 1 152 LEU n 1 153 LEU n 1 154 LYS n 1 155 VAL n 1 156 PHE n 1 157 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene LUXS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET29 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LUXS_BACSU _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession O34667 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMGCQTGYYLVVSGEPTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1IE0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 157 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O34667 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 157 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 157 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1IE0 _struct_ref_seq_dif.mon_id OCS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 84 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O34667 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 84 _struct_ref_seq_dif.details 'MODIFIED RESIDUE' _struct_ref_seq_dif.pdbx_auth_seq_num 84 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OCS 'L-peptide linking' n 'CYSTEINESULFONIC ACID' ? 'C3 H7 N O5 S' 169.156 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1IE0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_percent_sol 46.2 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details 'Ammonium sulfate, Tris-HCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 140 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1999-08-22 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'YALE MIRRORS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1IE0 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.6 _reflns.number_obs 23431 _reflns.number_all 23431 _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs 0.0630000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.5 _reflns.B_iso_Wilson_estimate 24.4 _reflns.pdbx_redundancy 8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 92.8 _reflns_shell.Rmerge_I_obs 0.3570000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1IE0 _refine.ls_number_reflns_obs 21965 _refine.ls_number_reflns_all 21965 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs 91.8 _refine.ls_R_factor_obs 0.1740000 _refine.ls_R_factor_all 0.1740000 _refine.ls_R_factor_R_work 0.1740000 _refine.ls_R_factor_R_free 0.2090000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 2203 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 24.3 _refine.aniso_B[1][1] -1.936 _refine.aniso_B[2][2] -1.936 _refine.aniso_B[3][3] 3.872 _refine.aniso_B[1][2] -2.279 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][3] 0.0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol 0.404425 _refine.solvent_model_param_bsol 63.204 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'MEASURED REFLECTIONS WITH |F| = 0 NOT USED IN REFINEMENT.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1237 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 1431 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d 0.01561 ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg 1.81733 ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it 3.03 1.5 ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it 5.09 2.0 ? ? 'X-RAY DIFFRACTION' ? o_scbond_it 3.71 2.0 ? ? 'X-RAY DIFFRACTION' ? o_scangle_it 6.52 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.6 _refine_ls_shell.d_res_low 1.67 _refine_ls_shell.number_reflns_R_work 1290 _refine_ls_shell.R_factor_R_work 0.3365000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3810000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 134 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 gol.par gol.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 cyo.par cyo.top 'X-RAY DIFFRACTION' # _struct.entry_id 1IE0 _struct.title 'CRYSTAL STRUCTURE OF LUXS' _struct.pdbx_descriptor 'AUTOINDUCER-2 PRODUCTION PROTEIN LUXS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IE0 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS' _struct_keywords.text 'four stranded antiparallel beta sheet, cysteine-sulfonic acid, structural genomics' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly (dimer) is generated by the crystallographic two fold. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? LEU A 9 ? SER A 3 LEU A 9 5 ? 7 HELX_P HELX_P2 2 LYS A 49 ? GLU A 69 ? LYS A 49 GLU A 69 1 ? 21 HELX_P HELX_P3 3 THR A 97 ? VAL A 113 ? THR A 97 VAL A 113 1 ? 17 HELX_P HELX_P4 4 ASP A 133 ? SER A 146 ? ASP A 133 SER A 146 1 ? 14 HELX_P HELX_P5 5 ASP A 148 ? LEU A 153 ? ASP A 148 LEU A 153 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 83 C ? ? ? 1_555 A OCS 84 N ? ? A GLY 83 A OCS 84 1_555 ? ? ? ? ? ? ? 1.343 ? covale2 covale ? ? A OCS 84 C ? ? ? 1_555 A GLN 85 N ? ? A OCS 84 A GLN 85 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 126 SG ? ? A ZN 1001 A CYS 126 1_555 ? ? ? ? ? ? ? 2.267 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 54 NE2 ? ? A ZN 1001 A HIS 54 1_555 ? ? ? ? ? ? ? 2.058 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 1001 A HOH 1002 1_555 ? ? ? ? ? ? ? 1.931 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 58 NE2 ? ? A ZN 1001 A HIS 58 1_555 ? ? ? ? ? ? ? 2.130 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 16 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 16 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 17 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 17 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.57 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 18 ? VAL A 27 ? TYR A 18 VAL A 27 A 2 GLY A 31 ? ARG A 39 ? GLY A 31 ARG A 39 A 3 GLY A 87 ? GLY A 94 ? GLY A 87 GLY A 94 A 4 PHE A 74 ? PRO A 81 ? PHE A 74 PRO A 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 27 ? N VAL A 27 O GLY A 31 ? O GLY A 31 A 2 3 N ILE A 38 ? N ILE A 38 O TYR A 88 ? O TYR A 88 A 3 4 N SER A 93 ? N SER A 93 O ASP A 75 ? O ASP A 75 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 1001' AC2 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE GOL A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 54 ? HIS A 54 . ? 1_555 ? 2 AC1 4 HIS A 58 ? HIS A 58 . ? 1_555 ? 3 AC1 4 CYS A 126 ? CYS A 126 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 1002 . ? 1_555 ? 5 AC2 10 VAL A 32 ? VAL A 32 . ? 8_566 ? 6 AC2 10 PHE A 40 ? PHE A 40 . ? 1_555 ? 7 AC2 10 CYS A 41 ? CYS A 41 . ? 1_555 ? 8 AC2 10 GLN A 46 ? GLN A 46 . ? 1_555 ? 9 AC2 10 GLU A 95 ? GLU A 95 . ? 8_566 ? 10 AC2 10 LEU A 140 ? LEU A 140 . ? 1_555 ? 11 AC2 10 PHE A 143 ? PHE A 143 . ? 1_555 ? 12 AC2 10 HOH D . ? HOH A 1018 . ? 1_555 ? 13 AC2 10 HOH D . ? HOH A 1034 . ? 1_555 ? 14 AC2 10 HOH D . ? HOH A 1155 . ? 1_555 ? # _database_PDB_matrix.entry_id 1IE0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1IE0 _atom_sites.fract_transf_matrix[1][1] 0.015941 _atom_sites.fract_transf_matrix[1][2] 0.009203 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018407 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006660 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 OCS 84 84 84 OCS CYO A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 HIS 132 132 132 HIS HIS A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 TRP 144 144 144 TRP TRP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 SER 146 146 146 SER THR A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 GLY 157 157 157 GLY GLY A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id OCS _pdbx_struct_mod_residue.label_seq_id 84 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id OCS _pdbx_struct_mod_residue.auth_seq_id 84 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'CYSTEINESULFONIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4930 ? 1 MORE -97 ? 1 'SSA (A^2)' 12360 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+7/6 0.5000000000 -0.8660254038 0.0000000000 31.3660000000 -0.8660254038 -0.5000000000 0.0000000000 54.3275056302 0.0000000000 0.0000000000 -1.0000000000 175.1633333333 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 126 ? A CYS 126 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 105.0 ? 2 SG ? A CYS 126 ? A CYS 126 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 O ? D HOH . ? A HOH 1002 ? 1_555 116.3 ? 3 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 O ? D HOH . ? A HOH 1002 ? 1_555 112.7 ? 4 SG ? A CYS 126 ? A CYS 126 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 58 ? A HIS 58 ? 1_555 116.3 ? 5 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 58 ? A HIS 58 ? 1_555 104.6 ? 6 O ? D HOH . ? A HOH 1002 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 NE2 ? A HIS 58 ? A HIS 58 ? 1_555 101.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-10-03 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 CNS refinement 1.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 1185 ? ? O A HOH 1186 ? ? 1.94 2 1 OE2 A GLU 5 ? ? O A HOH 1169 ? ? 2.13 3 1 O A HOH 1016 ? ? O A HOH 1095 ? ? 2.16 4 1 OD1 A OCS 84 ? ? O A HOH 1081 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NH1 A ARG 142 ? ? 1_555 O A HOH 1113 ? ? 8_566 2.00 2 1 O A HOH 1173 ? ? 1_555 O A HOH 1173 ? ? 10_666 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 4 ? ? -29.90 -26.75 2 1 GLN A 128 ? ? -157.51 75.07 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1001 1001 ZN ZN2 A . C 3 GOL 1 301 301 GOL GOL A . D 4 HOH 1 1002 1 HOH TIP A . D 4 HOH 2 1003 2 HOH TIP A . D 4 HOH 3 1004 3 HOH TIP A . D 4 HOH 4 1005 4 HOH TIP A . D 4 HOH 5 1006 5 HOH TIP A . D 4 HOH 6 1007 6 HOH TIP A . D 4 HOH 7 1008 7 HOH TIP A . D 4 HOH 8 1009 8 HOH TIP A . D 4 HOH 9 1010 9 HOH TIP A . D 4 HOH 10 1011 10 HOH TIP A . D 4 HOH 11 1012 11 HOH TIP A . D 4 HOH 12 1013 12 HOH TIP A . D 4 HOH 13 1014 13 HOH TIP A . D 4 HOH 14 1015 14 HOH TIP A . D 4 HOH 15 1016 15 HOH TIP A . D 4 HOH 16 1017 16 HOH TIP A . D 4 HOH 17 1018 17 HOH TIP A . D 4 HOH 18 1019 18 HOH TIP A . D 4 HOH 19 1020 19 HOH TIP A . D 4 HOH 20 1021 20 HOH TIP A . D 4 HOH 21 1022 21 HOH TIP A . D 4 HOH 22 1023 22 HOH TIP A . D 4 HOH 23 1024 23 HOH TIP A . D 4 HOH 24 1025 24 HOH TIP A . D 4 HOH 25 1026 25 HOH TIP A . D 4 HOH 26 1027 26 HOH TIP A . D 4 HOH 27 1028 27 HOH TIP A . D 4 HOH 28 1029 28 HOH TIP A . D 4 HOH 29 1030 29 HOH TIP A . D 4 HOH 30 1031 30 HOH TIP A . D 4 HOH 31 1032 31 HOH TIP A . D 4 HOH 32 1033 32 HOH TIP A . D 4 HOH 33 1034 33 HOH TIP A . D 4 HOH 34 1035 34 HOH TIP A . D 4 HOH 35 1036 35 HOH TIP A . D 4 HOH 36 1037 36 HOH TIP A . D 4 HOH 37 1038 37 HOH TIP A . D 4 HOH 38 1039 38 HOH TIP A . D 4 HOH 39 1040 39 HOH TIP A . D 4 HOH 40 1041 40 HOH TIP A . D 4 HOH 41 1042 41 HOH TIP A . D 4 HOH 42 1043 42 HOH TIP A . D 4 HOH 43 1044 43 HOH TIP A . D 4 HOH 44 1045 44 HOH TIP A . D 4 HOH 45 1046 45 HOH TIP A . D 4 HOH 46 1047 46 HOH TIP A . D 4 HOH 47 1048 47 HOH TIP A . D 4 HOH 48 1049 48 HOH TIP A . D 4 HOH 49 1050 49 HOH TIP A . D 4 HOH 50 1051 50 HOH TIP A . D 4 HOH 51 1052 51 HOH TIP A . D 4 HOH 52 1053 52 HOH TIP A . D 4 HOH 53 1054 53 HOH TIP A . D 4 HOH 54 1055 54 HOH TIP A . D 4 HOH 55 1056 55 HOH TIP A . D 4 HOH 56 1057 56 HOH TIP A . D 4 HOH 57 1058 57 HOH TIP A . D 4 HOH 58 1059 58 HOH TIP A . D 4 HOH 59 1060 59 HOH TIP A . D 4 HOH 60 1061 60 HOH TIP A . D 4 HOH 61 1062 61 HOH TIP A . D 4 HOH 62 1063 62 HOH TIP A . D 4 HOH 63 1064 63 HOH TIP A . D 4 HOH 64 1065 64 HOH TIP A . D 4 HOH 65 1066 65 HOH TIP A . D 4 HOH 66 1067 66 HOH TIP A . D 4 HOH 67 1068 67 HOH TIP A . D 4 HOH 68 1069 68 HOH TIP A . D 4 HOH 69 1070 69 HOH TIP A . D 4 HOH 70 1071 70 HOH TIP A . D 4 HOH 71 1072 71 HOH TIP A . D 4 HOH 72 1073 72 HOH TIP A . D 4 HOH 73 1074 73 HOH TIP A . D 4 HOH 74 1075 74 HOH TIP A . D 4 HOH 75 1076 75 HOH TIP A . D 4 HOH 76 1077 76 HOH TIP A . D 4 HOH 77 1078 77 HOH TIP A . D 4 HOH 78 1079 78 HOH TIP A . D 4 HOH 79 1080 79 HOH TIP A . D 4 HOH 80 1081 80 HOH TIP A . D 4 HOH 81 1082 81 HOH TIP A . D 4 HOH 82 1083 82 HOH TIP A . D 4 HOH 83 1084 83 HOH TIP A . D 4 HOH 84 1085 84 HOH TIP A . D 4 HOH 85 1086 85 HOH TIP A . D 4 HOH 86 1087 86 HOH TIP A . D 4 HOH 87 1088 87 HOH TIP A . D 4 HOH 88 1089 88 HOH TIP A . D 4 HOH 89 1090 89 HOH TIP A . D 4 HOH 90 1091 90 HOH TIP A . D 4 HOH 91 1092 91 HOH TIP A . D 4 HOH 92 1093 92 HOH TIP A . D 4 HOH 93 1094 93 HOH TIP A . D 4 HOH 94 1095 94 HOH TIP A . D 4 HOH 95 1096 95 HOH TIP A . D 4 HOH 96 1097 96 HOH TIP A . D 4 HOH 97 1098 97 HOH TIP A . D 4 HOH 98 1099 98 HOH TIP A . D 4 HOH 99 1100 99 HOH TIP A . D 4 HOH 100 1101 100 HOH TIP A . D 4 HOH 101 1102 101 HOH TIP A . D 4 HOH 102 1103 102 HOH TIP A . D 4 HOH 103 1104 103 HOH TIP A . D 4 HOH 104 1105 104 HOH TIP A . D 4 HOH 105 1106 105 HOH TIP A . D 4 HOH 106 1107 106 HOH TIP A . D 4 HOH 107 1108 107 HOH TIP A . D 4 HOH 108 1109 108 HOH TIP A . D 4 HOH 109 1110 109 HOH TIP A . D 4 HOH 110 1111 110 HOH TIP A . D 4 HOH 111 1112 111 HOH TIP A . D 4 HOH 112 1113 112 HOH TIP A . D 4 HOH 113 1114 113 HOH TIP A . D 4 HOH 114 1115 114 HOH TIP A . D 4 HOH 115 1116 115 HOH TIP A . D 4 HOH 116 1117 116 HOH TIP A . D 4 HOH 117 1118 117 HOH TIP A . D 4 HOH 118 1119 118 HOH TIP A . D 4 HOH 119 1120 119 HOH TIP A . D 4 HOH 120 1121 120 HOH TIP A . D 4 HOH 121 1122 121 HOH TIP A . D 4 HOH 122 1123 122 HOH TIP A . D 4 HOH 123 1124 123 HOH TIP A . D 4 HOH 124 1125 124 HOH TIP A . D 4 HOH 125 1126 125 HOH TIP A . D 4 HOH 126 1127 126 HOH TIP A . D 4 HOH 127 1128 127 HOH TIP A . D 4 HOH 128 1129 128 HOH TIP A . D 4 HOH 129 1130 129 HOH TIP A . D 4 HOH 130 1131 130 HOH TIP A . D 4 HOH 131 1132 131 HOH TIP A . D 4 HOH 132 1133 132 HOH TIP A . D 4 HOH 133 1134 133 HOH TIP A . D 4 HOH 134 1135 134 HOH TIP A . D 4 HOH 135 1136 135 HOH TIP A . D 4 HOH 136 1137 136 HOH TIP A . D 4 HOH 137 1138 137 HOH TIP A . D 4 HOH 138 1139 138 HOH TIP A . D 4 HOH 139 1140 139 HOH TIP A . D 4 HOH 140 1141 140 HOH TIP A . D 4 HOH 141 1142 141 HOH TIP A . D 4 HOH 142 1143 142 HOH TIP A . D 4 HOH 143 1144 143 HOH TIP A . D 4 HOH 144 1145 144 HOH TIP A . D 4 HOH 145 1146 145 HOH TIP A . D 4 HOH 146 1147 146 HOH TIP A . D 4 HOH 147 1148 147 HOH TIP A . D 4 HOH 148 1149 148 HOH TIP A . D 4 HOH 149 1150 149 HOH TIP A . D 4 HOH 150 1151 150 HOH TIP A . D 4 HOH 151 1152 151 HOH TIP A . D 4 HOH 152 1153 152 HOH TIP A . D 4 HOH 153 1154 153 HOH TIP A . D 4 HOH 154 1155 154 HOH TIP A . D 4 HOH 155 1156 155 HOH TIP A . D 4 HOH 156 1157 156 HOH TIP A . D 4 HOH 157 1158 157 HOH TIP A . D 4 HOH 158 1159 158 HOH TIP A . D 4 HOH 159 1160 159 HOH TIP A . D 4 HOH 160 1161 160 HOH TIP A . D 4 HOH 161 1162 161 HOH TIP A . D 4 HOH 162 1163 162 HOH TIP A . D 4 HOH 163 1164 163 HOH TIP A . D 4 HOH 164 1165 164 HOH TIP A . D 4 HOH 165 1166 165 HOH TIP A . D 4 HOH 166 1167 166 HOH TIP A . D 4 HOH 167 1168 167 HOH TIP A . D 4 HOH 168 1169 168 HOH TIP A . D 4 HOH 169 1170 169 HOH TIP A . D 4 HOH 170 1171 170 HOH TIP A . D 4 HOH 171 1172 171 HOH TIP A . D 4 HOH 172 1173 172 HOH TIP A . D 4 HOH 173 1174 173 HOH TIP A . D 4 HOH 174 1175 174 HOH TIP A . D 4 HOH 175 1176 175 HOH TIP A . D 4 HOH 176 1177 176 HOH TIP A . D 4 HOH 177 1178 177 HOH TIP A . D 4 HOH 178 1179 178 HOH TIP A . D 4 HOH 179 1180 179 HOH TIP A . D 4 HOH 180 1181 180 HOH TIP A . D 4 HOH 181 1182 181 HOH TIP A . D 4 HOH 182 1183 182 HOH TIP A . D 4 HOH 183 1184 183 HOH TIP A . D 4 HOH 184 1185 184 HOH TIP A . D 4 HOH 185 1186 185 HOH TIP A . D 4 HOH 186 1187 186 HOH TIP A . D 4 HOH 187 1188 187 HOH TIP A . #