data_1IG7 # _entry.id 1IG7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IG7 pdb_00001ig7 10.2210/pdb1ig7/pdb NDB PD0211 ? ? RCSB RCSB013245 ? ? WWPDB D_1000013245 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-04-23 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IG7 _pdbx_database_status.recvd_initial_deposition_date 2001-04-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hovde, S.' 1 'Abate-Shen, C.' 2 'Geiger, J.H.' 3 # _citation.id primary _citation.title 'Crystal structure of the Msx-1 homeodomain/DNA complex' _citation.journal_abbrev Biochemistry _citation.journal_volume 40 _citation.page_first 12013 _citation.page_last 12021 _citation.year 2001 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11580277 _citation.pdbx_database_id_DOI 10.1021/bi0108148 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hovde, S.' 1 ? primary 'Abate-Shen, C.' 2 ? primary 'Geiger, J.H.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*AP*CP*TP*AP*AP*TP*TP*GP*AP*AP*GP*G)-3'" 3999.636 1 ? ? ? ? 2 polymer syn "5'-D(P*TP*CP*CP*TP*TP*CP*AP*AP*TP*TP*AP*GP*TP*GP*AP*C)-3'" 4848.165 1 ? ? ? ? 3 polymer man 'Homeotic protein Msx-1' 6939.079 1 ? ? 'Homeodomain (157-233)' ? 4 water nat water 18.015 153 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DT)(DA)(DA)(DT)(DT)(DG)(DA)(DA)(DG)(DG)' CACTAATTGAAGG B ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DT)(DT)(DC)(DA)(DA)(DT)(DT)(DA)(DG)(DT)(DG)(DA)(DC)' TCCTTCAATTAGTGAC C ? 3 'polypeptide(L)' no no RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRL RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRL A ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DC n 1 4 DT n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DA n 1 11 DA n 1 12 DG n 1 13 DG n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DA n 2 8 DA n 2 9 DT n 2 10 DT n 2 11 DA n 2 12 DG n 2 13 DT n 2 14 DG n 2 15 DA n 2 16 DC n 3 1 ARG n 3 2 LYS n 3 3 PRO n 3 4 ARG n 3 5 THR n 3 6 PRO n 3 7 PHE n 3 8 THR n 3 9 THR n 3 10 ALA n 3 11 GLN n 3 12 LEU n 3 13 LEU n 3 14 ALA n 3 15 LEU n 3 16 GLU n 3 17 ARG n 3 18 LYS n 3 19 PHE n 3 20 ARG n 3 21 GLN n 3 22 LYS n 3 23 GLN n 3 24 TYR n 3 25 LEU n 3 26 SER n 3 27 ILE n 3 28 ALA n 3 29 GLU n 3 30 ARG n 3 31 ALA n 3 32 GLU n 3 33 PHE n 3 34 SER n 3 35 SER n 3 36 SER n 3 37 LEU n 3 38 SER n 3 39 LEU n 3 40 THR n 3 41 GLU n 3 42 THR n 3 43 GLN n 3 44 VAL n 3 45 LYS n 3 46 ILE n 3 47 TRP n 3 48 PHE n 3 49 GLN n 3 50 ASN n 3 51 ARG n 3 52 ARG n 3 53 ALA n 3 54 LYS n 3 55 ALA n 3 56 LYS n 3 57 ARG n 3 58 LEU n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pDs56-Msx-1(157-233)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 4 4 DC CYT B . n A 1 2 DA 2 5 5 DA ADE B . n A 1 3 DC 3 6 6 DC CYT B . n A 1 4 DT 4 7 7 DT THY B . n A 1 5 DA 5 8 8 DA ADE B . n A 1 6 DA 6 9 9 DA ADE B . n A 1 7 DT 7 10 10 DT THY B . n A 1 8 DT 8 11 11 DT THY B . n A 1 9 DG 9 12 12 DG GUA B . n A 1 10 DA 10 13 13 DA ADE B . n A 1 11 DA 11 14 14 DA ADE B . n A 1 12 DG 12 15 15 DG GUA B . n A 1 13 DG 13 16 16 DG GUA B . n B 2 1 DT 1 17 17 DT THY C . n B 2 2 DC 2 18 18 DC CYT C . n B 2 3 DC 3 19 19 DC CYT C . n B 2 4 DT 4 20 20 DT THY C . n B 2 5 DT 5 21 21 DT THY C . n B 2 6 DC 6 22 22 DC CYT C . n B 2 7 DA 7 23 23 DA ADE C . n B 2 8 DA 8 24 24 DA ADE C . n B 2 9 DT 9 25 25 DT THY C . n B 2 10 DT 10 26 26 DT THY C . n B 2 11 DA 11 27 27 DA ADE C . n B 2 12 DG 12 28 28 DG GUA C . n B 2 13 DT 13 29 29 DT THY C . n B 2 14 DG 14 30 30 DG GUA C . n B 2 15 DA 15 31 31 DA ADE C . n B 2 16 DC 16 32 32 DC CYT C . n C 3 1 ARG 1 102 102 ARG ARG A . n C 3 2 LYS 2 103 103 LYS LYS A . n C 3 3 PRO 3 104 104 PRO PRO A . n C 3 4 ARG 4 105 105 ARG ARG A . n C 3 5 THR 5 106 106 THR THR A . n C 3 6 PRO 6 107 107 PRO PRO A . n C 3 7 PHE 7 108 108 PHE PHE A . n C 3 8 THR 8 109 109 THR THR A . n C 3 9 THR 9 110 110 THR THR A . n C 3 10 ALA 10 111 111 ALA ALA A . n C 3 11 GLN 11 112 112 GLN GLN A . n C 3 12 LEU 12 113 113 LEU LEU A . n C 3 13 LEU 13 114 114 LEU LEU A . n C 3 14 ALA 14 115 115 ALA ALA A . n C 3 15 LEU 15 116 116 LEU LEU A . n C 3 16 GLU 16 117 117 GLU GLU A . n C 3 17 ARG 17 118 118 ARG ARG A . n C 3 18 LYS 18 119 119 LYS LYS A . n C 3 19 PHE 19 120 120 PHE PHE A . n C 3 20 ARG 20 121 121 ARG ARG A . n C 3 21 GLN 21 122 122 GLN GLN A . n C 3 22 LYS 22 123 123 LYS LYS A . n C 3 23 GLN 23 124 124 GLN GLN A . n C 3 24 TYR 24 125 125 TYR TYR A . n C 3 25 LEU 25 126 126 LEU LEU A . n C 3 26 SER 26 127 127 SER SER A . n C 3 27 ILE 27 128 128 ILE ILE A . n C 3 28 ALA 28 129 129 ALA ALA A . n C 3 29 GLU 29 130 130 GLU GLU A . n C 3 30 ARG 30 131 131 ARG ARG A . n C 3 31 ALA 31 132 132 ALA ALA A . n C 3 32 GLU 32 133 133 GLU GLU A . n C 3 33 PHE 33 134 134 PHE PHE A . n C 3 34 SER 34 135 135 SER SER A . n C 3 35 SER 35 136 136 SER SER A . n C 3 36 SER 36 137 137 SER SER A . n C 3 37 LEU 37 138 138 LEU LEU A . n C 3 38 SER 38 139 139 SER SER A . n C 3 39 LEU 39 140 140 LEU LEU A . n C 3 40 THR 40 141 141 THR THR A . n C 3 41 GLU 41 142 142 GLU GLU A . n C 3 42 THR 42 143 143 THR THR A . n C 3 43 GLN 43 144 144 GLN GLN A . n C 3 44 VAL 44 145 145 VAL VAL A . n C 3 45 LYS 45 146 146 LYS LYS A . n C 3 46 ILE 46 147 147 ILE ILE A . n C 3 47 TRP 47 148 148 TRP TRP A . n C 3 48 PHE 48 149 149 PHE PHE A . n C 3 49 GLN 49 150 150 GLN GLN A . n C 3 50 ASN 50 151 151 ASN ASN A . n C 3 51 ARG 51 152 152 ARG ARG A . n C 3 52 ARG 52 153 153 ARG ARG A . n C 3 53 ALA 53 154 154 ALA ALA A . n C 3 54 LYS 54 155 155 LYS LYS A . n C 3 55 ALA 55 156 156 ALA ALA A . n C 3 56 LYS 56 157 157 LYS LYS A . n C 3 57 ARG 57 158 158 ARG ARG A . n C 3 58 LEU 58 159 159 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 161 161 HOH WAT B . D 4 HOH 2 162 162 HOH WAT B . D 4 HOH 3 168 168 HOH WAT B . D 4 HOH 4 170 170 HOH WAT B . D 4 HOH 5 183 183 HOH WAT B . D 4 HOH 6 188 188 HOH WAT B . D 4 HOH 7 191 191 HOH WAT B . D 4 HOH 8 194 194 HOH WAT B . D 4 HOH 9 195 195 HOH WAT B . D 4 HOH 10 202 202 HOH WAT B . D 4 HOH 11 203 203 HOH WAT B . D 4 HOH 12 206 206 HOH WAT B . D 4 HOH 13 213 213 HOH WAT B . D 4 HOH 14 215 215 HOH WAT B . D 4 HOH 15 218 218 HOH WAT B . D 4 HOH 16 220 220 HOH WAT B . D 4 HOH 17 226 226 HOH WAT B . D 4 HOH 18 234 234 HOH WAT B . D 4 HOH 19 248 248 HOH WAT B . D 4 HOH 20 255 255 HOH WAT B . D 4 HOH 21 289 289 HOH WAT B . D 4 HOH 22 296 296 HOH WAT B . D 4 HOH 23 299 299 HOH WAT B . D 4 HOH 24 305 305 HOH WAT B . D 4 HOH 25 314 314 HOH WAT B . D 4 HOH 26 332 332 HOH WAT B . D 4 HOH 27 357 357 HOH WAT B . D 4 HOH 28 359 359 HOH WAT B . D 4 HOH 29 360 360 HOH WAT B . D 4 HOH 30 383 383 HOH WAT B . D 4 HOH 31 384 384 HOH WAT B . D 4 HOH 32 385 385 HOH WAT B . D 4 HOH 33 386 386 HOH WAT B . E 4 HOH 1 160 160 HOH WAT C . E 4 HOH 2 163 163 HOH WAT C . E 4 HOH 3 169 169 HOH WAT C . E 4 HOH 4 173 173 HOH WAT C . E 4 HOH 5 174 174 HOH WAT C . E 4 HOH 6 175 175 HOH WAT C . E 4 HOH 7 179 179 HOH WAT C . E 4 HOH 8 185 185 HOH WAT C . E 4 HOH 9 189 189 HOH WAT C . E 4 HOH 10 190 190 HOH WAT C . E 4 HOH 11 205 205 HOH WAT C . E 4 HOH 12 217 217 HOH WAT C . E 4 HOH 13 224 224 HOH WAT C . E 4 HOH 14 233 233 HOH WAT C . E 4 HOH 15 236 236 HOH WAT C . E 4 HOH 16 237 237 HOH WAT C . E 4 HOH 17 240 240 HOH WAT C . E 4 HOH 18 244 244 HOH WAT C . E 4 HOH 19 246 246 HOH WAT C . E 4 HOH 20 252 252 HOH WAT C . E 4 HOH 21 256 256 HOH WAT C . E 4 HOH 22 257 257 HOH WAT C . E 4 HOH 23 259 259 HOH WAT C . E 4 HOH 24 260 260 HOH WAT C . E 4 HOH 25 265 265 HOH WAT C . E 4 HOH 26 275 275 HOH WAT C . E 4 HOH 27 277 277 HOH WAT C . E 4 HOH 28 278 278 HOH WAT C . E 4 HOH 29 279 279 HOH WAT C . E 4 HOH 30 280 280 HOH WAT C . E 4 HOH 31 282 282 HOH WAT C . E 4 HOH 32 290 290 HOH WAT C . E 4 HOH 33 304 304 HOH WAT C . E 4 HOH 34 330 330 HOH WAT C . E 4 HOH 35 331 331 HOH WAT C . E 4 HOH 36 338 338 HOH WAT C . E 4 HOH 37 355 355 HOH WAT C . E 4 HOH 38 364 364 HOH WAT C . E 4 HOH 39 378 378 HOH WAT C . E 4 HOH 40 379 379 HOH WAT C . E 4 HOH 41 380 380 HOH WAT C . E 4 HOH 42 382 382 HOH WAT C . E 4 HOH 43 389 389 HOH WAT C . E 4 HOH 44 390 390 HOH WAT C . F 4 HOH 1 164 164 HOH WAT A . F 4 HOH 2 165 165 HOH WAT A . F 4 HOH 3 166 166 HOH WAT A . F 4 HOH 4 167 167 HOH WAT A . F 4 HOH 5 171 171 HOH WAT A . F 4 HOH 6 172 172 HOH WAT A . F 4 HOH 7 176 176 HOH WAT A . F 4 HOH 8 177 177 HOH WAT A . F 4 HOH 9 178 178 HOH WAT A . F 4 HOH 10 180 180 HOH WAT A . F 4 HOH 11 181 181 HOH WAT A . F 4 HOH 12 182 182 HOH WAT A . F 4 HOH 13 184 184 HOH WAT A . F 4 HOH 14 186 186 HOH WAT A . F 4 HOH 15 187 187 HOH WAT A . F 4 HOH 16 192 192 HOH WAT A . F 4 HOH 17 193 193 HOH WAT A . F 4 HOH 18 196 196 HOH WAT A . F 4 HOH 19 197 197 HOH WAT A . F 4 HOH 20 198 198 HOH WAT A . F 4 HOH 21 200 200 HOH WAT A . F 4 HOH 22 201 201 HOH WAT A . F 4 HOH 23 204 204 HOH WAT A . F 4 HOH 24 207 207 HOH WAT A . F 4 HOH 25 208 208 HOH WAT A . F 4 HOH 26 209 209 HOH WAT A . F 4 HOH 27 210 210 HOH WAT A . F 4 HOH 28 211 211 HOH WAT A . F 4 HOH 29 212 212 HOH WAT A . F 4 HOH 30 214 214 HOH WAT A . F 4 HOH 31 216 216 HOH WAT A . F 4 HOH 32 219 219 HOH WAT A . F 4 HOH 33 221 221 HOH WAT A . F 4 HOH 34 225 225 HOH WAT A . F 4 HOH 35 229 229 HOH WAT A . F 4 HOH 36 235 235 HOH WAT A . F 4 HOH 37 241 241 HOH WAT A . F 4 HOH 38 243 243 HOH WAT A . F 4 HOH 39 247 247 HOH WAT A . F 4 HOH 40 249 249 HOH WAT A . F 4 HOH 41 250 250 HOH WAT A . F 4 HOH 42 253 253 HOH WAT A . F 4 HOH 43 254 254 HOH WAT A . F 4 HOH 44 258 258 HOH WAT A . F 4 HOH 45 262 262 HOH WAT A . F 4 HOH 46 263 263 HOH WAT A . F 4 HOH 47 264 264 HOH WAT A . F 4 HOH 48 266 266 HOH WAT A . F 4 HOH 49 267 267 HOH WAT A . F 4 HOH 50 269 269 HOH WAT A . F 4 HOH 51 270 270 HOH WAT A . F 4 HOH 52 271 271 HOH WAT A . F 4 HOH 53 272 272 HOH WAT A . F 4 HOH 54 276 276 HOH WAT A . F 4 HOH 55 283 283 HOH WAT A . F 4 HOH 56 284 284 HOH WAT A . F 4 HOH 57 285 285 HOH WAT A . F 4 HOH 58 288 288 HOH WAT A . F 4 HOH 59 291 291 HOH WAT A . F 4 HOH 60 297 297 HOH WAT A . F 4 HOH 61 302 302 HOH WAT A . F 4 HOH 62 309 309 HOH WAT A . F 4 HOH 63 310 310 HOH WAT A . F 4 HOH 64 312 312 HOH WAT A . F 4 HOH 65 318 318 HOH WAT A . F 4 HOH 66 325 325 HOH WAT A . F 4 HOH 67 326 326 HOH WAT A . F 4 HOH 68 352 352 HOH WAT A . F 4 HOH 69 353 353 HOH WAT A . F 4 HOH 70 356 356 HOH WAT A . F 4 HOH 71 358 358 HOH WAT A . F 4 HOH 72 361 361 HOH WAT A . F 4 HOH 73 363 363 HOH WAT A . F 4 HOH 74 381 381 HOH WAT A . F 4 HOH 75 387 387 HOH WAT A . F 4 HOH 76 388 388 HOH WAT A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 121 ? CG ? C ARG 20 CG 2 1 Y 1 A ARG 121 ? CD ? C ARG 20 CD 3 1 Y 1 A ARG 121 ? NE ? C ARG 20 NE 4 1 Y 1 A ARG 121 ? CZ ? C ARG 20 CZ 5 1 Y 1 A ARG 121 ? NH1 ? C ARG 20 NH1 6 1 Y 1 A ARG 121 ? NH2 ? C ARG 20 NH2 7 1 Y 1 A GLN 122 ? CG ? C GLN 21 CG 8 1 Y 1 A GLN 122 ? CD ? C GLN 21 CD 9 1 Y 1 A GLN 122 ? OE1 ? C GLN 21 OE1 10 1 Y 1 A GLN 122 ? NE2 ? C GLN 21 NE2 11 1 Y 1 A LYS 157 ? CG ? C LYS 56 CG 12 1 Y 1 A LYS 157 ? CD ? C LYS 56 CD 13 1 Y 1 A LYS 157 ? CE ? C LYS 56 CE 14 1 Y 1 A LYS 157 ? NZ ? C LYS 56 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 # _cell.entry_id 1IG7 _cell.length_a 33.600 _cell.length_b 60.960 _cell.length_c 82.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IG7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1IG7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_percent_sol 55 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'PEG 4000, Sodium Acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'Sodium Acetate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 123 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1997-05-20 _diffrn_detector.details 'Osmic confocal maxflux mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni Filter' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1IG7 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -1.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 11914 _reflns.number_all 130352 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.3 _reflns.B_iso_Wilson_estimate 27.2 _reflns.pdbx_redundancy 11 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 97.7 _reflns_shell.Rmerge_I_obs 0.542 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1IG7 _refine.ls_number_reflns_obs 8007 _refine.ls_number_reflns_all 10391 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 412425.51 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 21.25 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 88.4 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_all 0.2119 _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.274 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 836 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 38.3 _refine.aniso_B[1][1] 18.91 _refine.aniso_B[2][2] -5.33 _refine.aniso_B[3][3] -13.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.351 _refine.solvent_model_param_bsol 48.12 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Even-Skipped Homeodomain/DNA complex' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values CNS _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1IG7 _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.38 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 476 _refine_hist.pdbx_number_atoms_nucleic_acid 590 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 1219 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 21.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.01 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.09 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.71 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.49 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.29 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 1004 _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.percent_reflns_obs 75.6 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.R_factor_R_free_error 0.033 _refine_ls_shell.percent_reflns_R_free 10.1 _refine_ls_shell.number_reflns_R_free 113 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1IG7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IG7 _struct.title 'Msx-1 Homeodomain/DNA Complex Structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IG7 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'helix-turn-helix, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP MSX1_MOUSE 3 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRL 167 P13297 ? 2 PDB 1IG7 1 ? ? 1IG7 ? 3 PDB 1IG7 2 ? ? 1IG7 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IG7 A 1 ? 58 ? P13297 167 ? 224 ? 102 159 2 2 1IG7 B 1 ? 13 ? 1IG7 4 ? 16 ? 4 16 3 3 1IG7 C 1 ? 16 ? 1IG7 17 ? 32 ? 17 32 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 8 ? LYS C 22 ? THR A 109 LYS A 123 1 ? 15 HELX_P HELX_P2 2 SER C 26 ? LEU C 37 ? SER A 127 LEU A 138 1 ? 12 HELX_P HELX_P3 3 THR C 40 ? LEU C 58 ? THR A 141 LEU A 159 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 14 N1 ? ? B DC 4 C DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 14 O6 ? ? B DC 4 C DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 14 N2 ? ? B DC 4 C DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 13 N3 ? ? B DA 5 C DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 13 O4 ? ? B DA 5 C DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 6 C DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 6 C DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 6 C DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 7 C DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 11 N6 ? ? B DT 7 C DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 8 C DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 8 C DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 9 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 9 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 8 N1 ? ? B DT 10 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 8 N6 ? ? B DT 10 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 11 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 11 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 12 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 12 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 12 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 5 N3 ? ? B DA 13 C DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 5 O4 ? ? B DA 13 C DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 4 N3 ? ? B DA 14 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 4 O4 ? ? B DA 14 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 15 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 3 O2 ? ? B DG 15 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 3 N4 ? ? B DG 15 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 2 N3 ? ? B DG 16 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 2 O2 ? ? B DG 16 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 2 N4 ? ? B DG 16 C DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 169 ? ? O C HOH 330 ? ? 1.99 2 1 OP2 C DT 25 ? ? O C HOH 240 ? ? 2.14 3 1 "C4'" C DC 32 ? ? O C HOH 378 ? ? 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C2 B DT 10 ? ? O2 B DT 10 ? ? 1.144 1.220 -0.076 0.008 N 2 1 "O3'" B DG 12 ? ? "C3'" B DG 12 ? ? 1.383 1.419 -0.036 0.006 N 3 1 C2 B DG 16 ? ? N3 B DG 16 ? ? 1.374 1.323 0.051 0.008 N 4 1 "O3'" C DC 19 ? ? "C3'" C DC 19 ? ? 1.381 1.419 -0.038 0.006 N 5 1 "O3'" C DT 21 ? ? "C3'" C DT 21 ? ? 1.377 1.419 -0.042 0.006 N 6 1 C5 C DA 24 ? ? C6 C DA 24 ? ? 1.461 1.406 0.055 0.009 N 7 1 CB A GLU 133 ? ? CG A GLU 133 ? ? 1.382 1.517 -0.135 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" B DA 9 ? ? P B DA 9 ? ? OP2 B DA 9 ? ? 99.90 105.70 -5.80 0.90 N 2 1 "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? "C1'" B DG 12 ? ? 96.90 102.40 -5.50 0.80 N 3 1 "O5'" C DT 17 ? ? P C DT 17 ? ? OP1 C DT 17 ? ? 94.91 105.70 -10.79 0.90 N 4 1 "O3'" C DT 29 ? ? P C DG 30 ? ? OP2 C DG 30 ? ? 118.07 110.50 7.57 1.10 Y 5 1 "O4'" C DG 30 ? ? "C1'" C DG 30 ? ? N9 C DG 30 ? ? 110.36 108.30 2.06 0.30 N 6 1 "C5'" C DA 31 ? ? "C4'" C DA 31 ? ? "C3'" C DA 31 ? ? 102.96 114.10 -11.14 1.80 N 7 1 NE A ARG 118 ? ? CZ A ARG 118 ? ? NH2 A ARG 118 ? ? 116.85 120.30 -3.45 0.50 N 8 1 CG A ARG 153 ? ? CD A ARG 153 ? ? NE A ARG 153 ? ? 98.59 111.80 -13.21 2.10 N 9 1 CD A ARG 153 ? ? NE A ARG 153 ? ? CZ A ARG 153 ? ? 132.17 123.60 8.57 1.40 N 10 1 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH1 A ARG 153 ? ? 126.07 120.30 5.77 0.50 N 11 1 NE A ARG 153 ? ? CZ A ARG 153 ? ? NH2 A ARG 153 ? ? 110.42 120.30 -9.88 0.50 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT C 17 ? ? 0.071 'SIDE CHAIN' 2 1 DC C 18 ? ? 0.079 'SIDE CHAIN' 3 1 DC C 19 ? ? 0.108 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 DA OP3 O N N 58 DA P P N N 59 DA OP1 O N N 60 DA OP2 O N N 61 DA "O5'" O N N 62 DA "C5'" C N N 63 DA "C4'" C N R 64 DA "O4'" O N N 65 DA "C3'" C N S 66 DA "O3'" O N N 67 DA "C2'" C N N 68 DA "C1'" C N R 69 DA N9 N Y N 70 DA C8 C Y N 71 DA N7 N Y N 72 DA C5 C Y N 73 DA C6 C Y N 74 DA N6 N N N 75 DA N1 N Y N 76 DA C2 C Y N 77 DA N3 N Y N 78 DA C4 C Y N 79 DA HOP3 H N N 80 DA HOP2 H N N 81 DA "H5'" H N N 82 DA "H5''" H N N 83 DA "H4'" H N N 84 DA "H3'" H N N 85 DA "HO3'" H N N 86 DA "H2'" H N N 87 DA "H2''" H N N 88 DA "H1'" H N N 89 DA H8 H N N 90 DA H61 H N N 91 DA H62 H N N 92 DA H2 H N N 93 DC OP3 O N N 94 DC P P N N 95 DC OP1 O N N 96 DC OP2 O N N 97 DC "O5'" O N N 98 DC "C5'" C N N 99 DC "C4'" C N R 100 DC "O4'" O N N 101 DC "C3'" C N S 102 DC "O3'" O N N 103 DC "C2'" C N N 104 DC "C1'" C N R 105 DC N1 N N N 106 DC C2 C N N 107 DC O2 O N N 108 DC N3 N N N 109 DC C4 C N N 110 DC N4 N N N 111 DC C5 C N N 112 DC C6 C N N 113 DC HOP3 H N N 114 DC HOP2 H N N 115 DC "H5'" H N N 116 DC "H5''" H N N 117 DC "H4'" H N N 118 DC "H3'" H N N 119 DC "HO3'" H N N 120 DC "H2'" H N N 121 DC "H2''" H N N 122 DC "H1'" H N N 123 DC H41 H N N 124 DC H42 H N N 125 DC H5 H N N 126 DC H6 H N N 127 DG OP3 O N N 128 DG P P N N 129 DG OP1 O N N 130 DG OP2 O N N 131 DG "O5'" O N N 132 DG "C5'" C N N 133 DG "C4'" C N R 134 DG "O4'" O N N 135 DG "C3'" C N S 136 DG "O3'" O N N 137 DG "C2'" C N N 138 DG "C1'" C N R 139 DG N9 N Y N 140 DG C8 C Y N 141 DG N7 N Y N 142 DG C5 C Y N 143 DG C6 C N N 144 DG O6 O N N 145 DG N1 N N N 146 DG C2 C N N 147 DG N2 N N N 148 DG N3 N N N 149 DG C4 C Y N 150 DG HOP3 H N N 151 DG HOP2 H N N 152 DG "H5'" H N N 153 DG "H5''" H N N 154 DG "H4'" H N N 155 DG "H3'" H N N 156 DG "HO3'" H N N 157 DG "H2'" H N N 158 DG "H2''" H N N 159 DG "H1'" H N N 160 DG H8 H N N 161 DG H1 H N N 162 DG H21 H N N 163 DG H22 H N N 164 DT OP3 O N N 165 DT P P N N 166 DT OP1 O N N 167 DT OP2 O N N 168 DT "O5'" O N N 169 DT "C5'" C N N 170 DT "C4'" C N R 171 DT "O4'" O N N 172 DT "C3'" C N S 173 DT "O3'" O N N 174 DT "C2'" C N N 175 DT "C1'" C N R 176 DT N1 N N N 177 DT C2 C N N 178 DT O2 O N N 179 DT N3 N N N 180 DT C4 C N N 181 DT O4 O N N 182 DT C5 C N N 183 DT C7 C N N 184 DT C6 C N N 185 DT HOP3 H N N 186 DT HOP2 H N N 187 DT "H5'" H N N 188 DT "H5''" H N N 189 DT "H4'" H N N 190 DT "H3'" H N N 191 DT "HO3'" H N N 192 DT "H2'" H N N 193 DT "H2''" H N N 194 DT "H1'" H N N 195 DT H3 H N N 196 DT H71 H N N 197 DT H72 H N N 198 DT H73 H N N 199 DT H6 H N N 200 GLN N N N N 201 GLN CA C N S 202 GLN C C N N 203 GLN O O N N 204 GLN CB C N N 205 GLN CG C N N 206 GLN CD C N N 207 GLN OE1 O N N 208 GLN NE2 N N N 209 GLN OXT O N N 210 GLN H H N N 211 GLN H2 H N N 212 GLN HA H N N 213 GLN HB2 H N N 214 GLN HB3 H N N 215 GLN HG2 H N N 216 GLN HG3 H N N 217 GLN HE21 H N N 218 GLN HE22 H N N 219 GLN HXT H N N 220 GLU N N N N 221 GLU CA C N S 222 GLU C C N N 223 GLU O O N N 224 GLU CB C N N 225 GLU CG C N N 226 GLU CD C N N 227 GLU OE1 O N N 228 GLU OE2 O N N 229 GLU OXT O N N 230 GLU H H N N 231 GLU H2 H N N 232 GLU HA H N N 233 GLU HB2 H N N 234 GLU HB3 H N N 235 GLU HG2 H N N 236 GLU HG3 H N N 237 GLU HE2 H N N 238 GLU HXT H N N 239 HOH O O N N 240 HOH H1 H N N 241 HOH H2 H N N 242 ILE N N N N 243 ILE CA C N S 244 ILE C C N N 245 ILE O O N N 246 ILE CB C N S 247 ILE CG1 C N N 248 ILE CG2 C N N 249 ILE CD1 C N N 250 ILE OXT O N N 251 ILE H H N N 252 ILE H2 H N N 253 ILE HA H N N 254 ILE HB H N N 255 ILE HG12 H N N 256 ILE HG13 H N N 257 ILE HG21 H N N 258 ILE HG22 H N N 259 ILE HG23 H N N 260 ILE HD11 H N N 261 ILE HD12 H N N 262 ILE HD13 H N N 263 ILE HXT H N N 264 LEU N N N N 265 LEU CA C N S 266 LEU C C N N 267 LEU O O N N 268 LEU CB C N N 269 LEU CG C N N 270 LEU CD1 C N N 271 LEU CD2 C N N 272 LEU OXT O N N 273 LEU H H N N 274 LEU H2 H N N 275 LEU HA H N N 276 LEU HB2 H N N 277 LEU HB3 H N N 278 LEU HG H N N 279 LEU HD11 H N N 280 LEU HD12 H N N 281 LEU HD13 H N N 282 LEU HD21 H N N 283 LEU HD22 H N N 284 LEU HD23 H N N 285 LEU HXT H N N 286 LYS N N N N 287 LYS CA C N S 288 LYS C C N N 289 LYS O O N N 290 LYS CB C N N 291 LYS CG C N N 292 LYS CD C N N 293 LYS CE C N N 294 LYS NZ N N N 295 LYS OXT O N N 296 LYS H H N N 297 LYS H2 H N N 298 LYS HA H N N 299 LYS HB2 H N N 300 LYS HB3 H N N 301 LYS HG2 H N N 302 LYS HG3 H N N 303 LYS HD2 H N N 304 LYS HD3 H N N 305 LYS HE2 H N N 306 LYS HE3 H N N 307 LYS HZ1 H N N 308 LYS HZ2 H N N 309 LYS HZ3 H N N 310 LYS HXT H N N 311 PHE N N N N 312 PHE CA C N S 313 PHE C C N N 314 PHE O O N N 315 PHE CB C N N 316 PHE CG C Y N 317 PHE CD1 C Y N 318 PHE CD2 C Y N 319 PHE CE1 C Y N 320 PHE CE2 C Y N 321 PHE CZ C Y N 322 PHE OXT O N N 323 PHE H H N N 324 PHE H2 H N N 325 PHE HA H N N 326 PHE HB2 H N N 327 PHE HB3 H N N 328 PHE HD1 H N N 329 PHE HD2 H N N 330 PHE HE1 H N N 331 PHE HE2 H N N 332 PHE HZ H N N 333 PHE HXT H N N 334 PRO N N N N 335 PRO CA C N S 336 PRO C C N N 337 PRO O O N N 338 PRO CB C N N 339 PRO CG C N N 340 PRO CD C N N 341 PRO OXT O N N 342 PRO H H N N 343 PRO HA H N N 344 PRO HB2 H N N 345 PRO HB3 H N N 346 PRO HG2 H N N 347 PRO HG3 H N N 348 PRO HD2 H N N 349 PRO HD3 H N N 350 PRO HXT H N N 351 SER N N N N 352 SER CA C N S 353 SER C C N N 354 SER O O N N 355 SER CB C N N 356 SER OG O N N 357 SER OXT O N N 358 SER H H N N 359 SER H2 H N N 360 SER HA H N N 361 SER HB2 H N N 362 SER HB3 H N N 363 SER HG H N N 364 SER HXT H N N 365 THR N N N N 366 THR CA C N S 367 THR C C N N 368 THR O O N N 369 THR CB C N R 370 THR OG1 O N N 371 THR CG2 C N N 372 THR OXT O N N 373 THR H H N N 374 THR H2 H N N 375 THR HA H N N 376 THR HB H N N 377 THR HG1 H N N 378 THR HG21 H N N 379 THR HG22 H N N 380 THR HG23 H N N 381 THR HXT H N N 382 TRP N N N N 383 TRP CA C N S 384 TRP C C N N 385 TRP O O N N 386 TRP CB C N N 387 TRP CG C Y N 388 TRP CD1 C Y N 389 TRP CD2 C Y N 390 TRP NE1 N Y N 391 TRP CE2 C Y N 392 TRP CE3 C Y N 393 TRP CZ2 C Y N 394 TRP CZ3 C Y N 395 TRP CH2 C Y N 396 TRP OXT O N N 397 TRP H H N N 398 TRP H2 H N N 399 TRP HA H N N 400 TRP HB2 H N N 401 TRP HB3 H N N 402 TRP HD1 H N N 403 TRP HE1 H N N 404 TRP HE3 H N N 405 TRP HZ2 H N N 406 TRP HZ3 H N N 407 TRP HH2 H N N 408 TRP HXT H N N 409 TYR N N N N 410 TYR CA C N S 411 TYR C C N N 412 TYR O O N N 413 TYR CB C N N 414 TYR CG C Y N 415 TYR CD1 C Y N 416 TYR CD2 C Y N 417 TYR CE1 C Y N 418 TYR CE2 C Y N 419 TYR CZ C Y N 420 TYR OH O N N 421 TYR OXT O N N 422 TYR H H N N 423 TYR H2 H N N 424 TYR HA H N N 425 TYR HB2 H N N 426 TYR HB3 H N N 427 TYR HD1 H N N 428 TYR HD2 H N N 429 TYR HE1 H N N 430 TYR HE2 H N N 431 TYR HH H N N 432 TYR HXT H N N 433 VAL N N N N 434 VAL CA C N S 435 VAL C C N N 436 VAL O O N N 437 VAL CB C N N 438 VAL CG1 C N N 439 VAL CG2 C N N 440 VAL OXT O N N 441 VAL H H N N 442 VAL H2 H N N 443 VAL HA H N N 444 VAL HB H N N 445 VAL HG11 H N N 446 VAL HG12 H N N 447 VAL HG13 H N N 448 VAL HG21 H N N 449 VAL HG22 H N N 450 VAL HG23 H N N 451 VAL HXT H N N 452 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 DA OP3 P sing N N 55 DA OP3 HOP3 sing N N 56 DA P OP1 doub N N 57 DA P OP2 sing N N 58 DA P "O5'" sing N N 59 DA OP2 HOP2 sing N N 60 DA "O5'" "C5'" sing N N 61 DA "C5'" "C4'" sing N N 62 DA "C5'" "H5'" sing N N 63 DA "C5'" "H5''" sing N N 64 DA "C4'" "O4'" sing N N 65 DA "C4'" "C3'" sing N N 66 DA "C4'" "H4'" sing N N 67 DA "O4'" "C1'" sing N N 68 DA "C3'" "O3'" sing N N 69 DA "C3'" "C2'" sing N N 70 DA "C3'" "H3'" sing N N 71 DA "O3'" "HO3'" sing N N 72 DA "C2'" "C1'" sing N N 73 DA "C2'" "H2'" sing N N 74 DA "C2'" "H2''" sing N N 75 DA "C1'" N9 sing N N 76 DA "C1'" "H1'" sing N N 77 DA N9 C8 sing Y N 78 DA N9 C4 sing Y N 79 DA C8 N7 doub Y N 80 DA C8 H8 sing N N 81 DA N7 C5 sing Y N 82 DA C5 C6 sing Y N 83 DA C5 C4 doub Y N 84 DA C6 N6 sing N N 85 DA C6 N1 doub Y N 86 DA N6 H61 sing N N 87 DA N6 H62 sing N N 88 DA N1 C2 sing Y N 89 DA C2 N3 doub Y N 90 DA C2 H2 sing N N 91 DA N3 C4 sing Y N 92 DC OP3 P sing N N 93 DC OP3 HOP3 sing N N 94 DC P OP1 doub N N 95 DC P OP2 sing N N 96 DC P "O5'" sing N N 97 DC OP2 HOP2 sing N N 98 DC "O5'" "C5'" sing N N 99 DC "C5'" "C4'" sing N N 100 DC "C5'" "H5'" sing N N 101 DC "C5'" "H5''" sing N N 102 DC "C4'" "O4'" sing N N 103 DC "C4'" "C3'" sing N N 104 DC "C4'" "H4'" sing N N 105 DC "O4'" "C1'" sing N N 106 DC "C3'" "O3'" sing N N 107 DC "C3'" "C2'" sing N N 108 DC "C3'" "H3'" sing N N 109 DC "O3'" "HO3'" sing N N 110 DC "C2'" "C1'" sing N N 111 DC "C2'" "H2'" sing N N 112 DC "C2'" "H2''" sing N N 113 DC "C1'" N1 sing N N 114 DC "C1'" "H1'" sing N N 115 DC N1 C2 sing N N 116 DC N1 C6 sing N N 117 DC C2 O2 doub N N 118 DC C2 N3 sing N N 119 DC N3 C4 doub N N 120 DC C4 N4 sing N N 121 DC C4 C5 sing N N 122 DC N4 H41 sing N N 123 DC N4 H42 sing N N 124 DC C5 C6 doub N N 125 DC C5 H5 sing N N 126 DC C6 H6 sing N N 127 DG OP3 P sing N N 128 DG OP3 HOP3 sing N N 129 DG P OP1 doub N N 130 DG P OP2 sing N N 131 DG P "O5'" sing N N 132 DG OP2 HOP2 sing N N 133 DG "O5'" "C5'" sing N N 134 DG "C5'" "C4'" sing N N 135 DG "C5'" "H5'" sing N N 136 DG "C5'" "H5''" sing N N 137 DG "C4'" "O4'" sing N N 138 DG "C4'" "C3'" sing N N 139 DG "C4'" "H4'" sing N N 140 DG "O4'" "C1'" sing N N 141 DG "C3'" "O3'" sing N N 142 DG "C3'" "C2'" sing N N 143 DG "C3'" "H3'" sing N N 144 DG "O3'" "HO3'" sing N N 145 DG "C2'" "C1'" sing N N 146 DG "C2'" "H2'" sing N N 147 DG "C2'" "H2''" sing N N 148 DG "C1'" N9 sing N N 149 DG "C1'" "H1'" sing N N 150 DG N9 C8 sing Y N 151 DG N9 C4 sing Y N 152 DG C8 N7 doub Y N 153 DG C8 H8 sing N N 154 DG N7 C5 sing Y N 155 DG C5 C6 sing N N 156 DG C5 C4 doub Y N 157 DG C6 O6 doub N N 158 DG C6 N1 sing N N 159 DG N1 C2 sing N N 160 DG N1 H1 sing N N 161 DG C2 N2 sing N N 162 DG C2 N3 doub N N 163 DG N2 H21 sing N N 164 DG N2 H22 sing N N 165 DG N3 C4 sing N N 166 DT OP3 P sing N N 167 DT OP3 HOP3 sing N N 168 DT P OP1 doub N N 169 DT P OP2 sing N N 170 DT P "O5'" sing N N 171 DT OP2 HOP2 sing N N 172 DT "O5'" "C5'" sing N N 173 DT "C5'" "C4'" sing N N 174 DT "C5'" "H5'" sing N N 175 DT "C5'" "H5''" sing N N 176 DT "C4'" "O4'" sing N N 177 DT "C4'" "C3'" sing N N 178 DT "C4'" "H4'" sing N N 179 DT "O4'" "C1'" sing N N 180 DT "C3'" "O3'" sing N N 181 DT "C3'" "C2'" sing N N 182 DT "C3'" "H3'" sing N N 183 DT "O3'" "HO3'" sing N N 184 DT "C2'" "C1'" sing N N 185 DT "C2'" "H2'" sing N N 186 DT "C2'" "H2''" sing N N 187 DT "C1'" N1 sing N N 188 DT "C1'" "H1'" sing N N 189 DT N1 C2 sing N N 190 DT N1 C6 sing N N 191 DT C2 O2 doub N N 192 DT C2 N3 sing N N 193 DT N3 C4 sing N N 194 DT N3 H3 sing N N 195 DT C4 O4 doub N N 196 DT C4 C5 sing N N 197 DT C5 C7 sing N N 198 DT C5 C6 doub N N 199 DT C7 H71 sing N N 200 DT C7 H72 sing N N 201 DT C7 H73 sing N N 202 DT C6 H6 sing N N 203 GLN N CA sing N N 204 GLN N H sing N N 205 GLN N H2 sing N N 206 GLN CA C sing N N 207 GLN CA CB sing N N 208 GLN CA HA sing N N 209 GLN C O doub N N 210 GLN C OXT sing N N 211 GLN CB CG sing N N 212 GLN CB HB2 sing N N 213 GLN CB HB3 sing N N 214 GLN CG CD sing N N 215 GLN CG HG2 sing N N 216 GLN CG HG3 sing N N 217 GLN CD OE1 doub N N 218 GLN CD NE2 sing N N 219 GLN NE2 HE21 sing N N 220 GLN NE2 HE22 sing N N 221 GLN OXT HXT sing N N 222 GLU N CA sing N N 223 GLU N H sing N N 224 GLU N H2 sing N N 225 GLU CA C sing N N 226 GLU CA CB sing N N 227 GLU CA HA sing N N 228 GLU C O doub N N 229 GLU C OXT sing N N 230 GLU CB CG sing N N 231 GLU CB HB2 sing N N 232 GLU CB HB3 sing N N 233 GLU CG CD sing N N 234 GLU CG HG2 sing N N 235 GLU CG HG3 sing N N 236 GLU CD OE1 doub N N 237 GLU CD OE2 sing N N 238 GLU OE2 HE2 sing N N 239 GLU OXT HXT sing N N 240 HOH O H1 sing N N 241 HOH O H2 sing N N 242 ILE N CA sing N N 243 ILE N H sing N N 244 ILE N H2 sing N N 245 ILE CA C sing N N 246 ILE CA CB sing N N 247 ILE CA HA sing N N 248 ILE C O doub N N 249 ILE C OXT sing N N 250 ILE CB CG1 sing N N 251 ILE CB CG2 sing N N 252 ILE CB HB sing N N 253 ILE CG1 CD1 sing N N 254 ILE CG1 HG12 sing N N 255 ILE CG1 HG13 sing N N 256 ILE CG2 HG21 sing N N 257 ILE CG2 HG22 sing N N 258 ILE CG2 HG23 sing N N 259 ILE CD1 HD11 sing N N 260 ILE CD1 HD12 sing N N 261 ILE CD1 HD13 sing N N 262 ILE OXT HXT sing N N 263 LEU N CA sing N N 264 LEU N H sing N N 265 LEU N H2 sing N N 266 LEU CA C sing N N 267 LEU CA CB sing N N 268 LEU CA HA sing N N 269 LEU C O doub N N 270 LEU C OXT sing N N 271 LEU CB CG sing N N 272 LEU CB HB2 sing N N 273 LEU CB HB3 sing N N 274 LEU CG CD1 sing N N 275 LEU CG CD2 sing N N 276 LEU CG HG sing N N 277 LEU CD1 HD11 sing N N 278 LEU CD1 HD12 sing N N 279 LEU CD1 HD13 sing N N 280 LEU CD2 HD21 sing N N 281 LEU CD2 HD22 sing N N 282 LEU CD2 HD23 sing N N 283 LEU OXT HXT sing N N 284 LYS N CA sing N N 285 LYS N H sing N N 286 LYS N H2 sing N N 287 LYS CA C sing N N 288 LYS CA CB sing N N 289 LYS CA HA sing N N 290 LYS C O doub N N 291 LYS C OXT sing N N 292 LYS CB CG sing N N 293 LYS CB HB2 sing N N 294 LYS CB HB3 sing N N 295 LYS CG CD sing N N 296 LYS CG HG2 sing N N 297 LYS CG HG3 sing N N 298 LYS CD CE sing N N 299 LYS CD HD2 sing N N 300 LYS CD HD3 sing N N 301 LYS CE NZ sing N N 302 LYS CE HE2 sing N N 303 LYS CE HE3 sing N N 304 LYS NZ HZ1 sing N N 305 LYS NZ HZ2 sing N N 306 LYS NZ HZ3 sing N N 307 LYS OXT HXT sing N N 308 PHE N CA sing N N 309 PHE N H sing N N 310 PHE N H2 sing N N 311 PHE CA C sing N N 312 PHE CA CB sing N N 313 PHE CA HA sing N N 314 PHE C O doub N N 315 PHE C OXT sing N N 316 PHE CB CG sing N N 317 PHE CB HB2 sing N N 318 PHE CB HB3 sing N N 319 PHE CG CD1 doub Y N 320 PHE CG CD2 sing Y N 321 PHE CD1 CE1 sing Y N 322 PHE CD1 HD1 sing N N 323 PHE CD2 CE2 doub Y N 324 PHE CD2 HD2 sing N N 325 PHE CE1 CZ doub Y N 326 PHE CE1 HE1 sing N N 327 PHE CE2 CZ sing Y N 328 PHE CE2 HE2 sing N N 329 PHE CZ HZ sing N N 330 PHE OXT HXT sing N N 331 PRO N CA sing N N 332 PRO N CD sing N N 333 PRO N H sing N N 334 PRO CA C sing N N 335 PRO CA CB sing N N 336 PRO CA HA sing N N 337 PRO C O doub N N 338 PRO C OXT sing N N 339 PRO CB CG sing N N 340 PRO CB HB2 sing N N 341 PRO CB HB3 sing N N 342 PRO CG CD sing N N 343 PRO CG HG2 sing N N 344 PRO CG HG3 sing N N 345 PRO CD HD2 sing N N 346 PRO CD HD3 sing N N 347 PRO OXT HXT sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1IG7 'double helix' 1IG7 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 14 1_555 0.749 -0.830 -0.109 -2.633 -15.700 -4.450 1 B_DC4:DG30_C B 4 ? C 30 ? 19 1 1 A DA 2 1_555 B DT 13 1_555 -0.071 -0.332 -0.023 4.615 -3.912 -0.566 2 B_DA5:DT29_C B 5 ? C 29 ? 20 1 1 A DC 3 1_555 B DG 12 1_555 0.302 -0.491 -0.076 8.901 -9.032 2.199 3 B_DC6:DG28_C B 6 ? C 28 ? 19 1 1 A DT 4 1_555 B DA 11 1_555 -0.314 -0.239 -0.103 1.219 -4.151 11.309 4 B_DT7:DA27_C B 7 ? C 27 ? 20 1 1 A DA 5 1_555 B DT 10 1_555 0.340 -0.156 -0.522 -1.811 -13.524 5.199 5 B_DA8:DT26_C B 8 ? C 26 ? 20 1 1 A DA 6 1_555 B DT 9 1_555 0.200 -0.263 0.020 -1.087 -12.364 9.270 6 B_DA9:DT25_C B 9 ? C 25 ? 20 1 1 A DT 7 1_555 B DA 8 1_555 -0.209 -0.356 -0.024 -5.290 -12.827 4.354 7 B_DT10:DA24_C B 10 ? C 24 ? 20 1 1 A DT 8 1_555 B DA 7 1_555 -0.024 -0.105 0.276 -5.349 -6.502 3.594 8 B_DT11:DA23_C B 11 ? C 23 ? 20 1 1 A DG 9 1_555 B DC 6 1_555 -0.135 -0.274 -0.427 -0.240 -6.308 -2.989 9 B_DG12:DC22_C B 12 ? C 22 ? 19 1 1 A DA 10 1_555 B DT 5 1_555 0.238 -0.243 -0.181 1.980 -10.903 2.708 10 B_DA13:DT21_C B 13 ? C 21 ? 20 1 1 A DA 11 1_555 B DT 4 1_555 0.636 -0.321 0.207 8.931 -13.101 -3.680 11 B_DA14:DT20_C B 14 ? C 20 ? 20 1 1 A DG 12 1_555 B DC 3 1_555 -0.113 -0.336 0.328 3.925 -13.885 0.309 12 B_DG15:DC19_C B 15 ? C 19 ? 19 1 1 A DG 13 1_555 B DC 2 1_555 -0.671 -0.739 0.143 2.653 -7.298 -4.019 13 B_DG16:DC18_C B 16 ? C 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 14 1_555 A DA 2 1_555 B DT 13 1_555 -0.705 -0.335 3.098 1.661 5.251 29.727 -1.636 1.666 2.953 10.125 -3.203 30.222 1 BB_DC4DA5:DT29DG30_CC B 4 ? C 30 ? B 5 ? C 29 ? 1 A DA 2 1_555 B DT 13 1_555 A DC 3 1_555 B DG 12 1_555 0.451 -0.360 3.208 0.782 3.658 30.943 -1.351 -0.694 3.156 6.825 -1.458 31.163 2 BB_DA5DC6:DG28DT29_CC B 5 ? C 29 ? B 6 ? C 28 ? 1 A DC 3 1_555 B DG 12 1_555 A DT 4 1_555 B DA 11 1_555 1.405 0.083 3.459 4.380 11.647 33.691 -1.688 -1.596 3.450 19.296 -7.257 35.853 3 BB_DC6DT7:DA27DG28_CC B 6 ? C 28 ? B 7 ? C 27 ? 1 A DT 4 1_555 B DA 11 1_555 A DA 5 1_555 B DT 10 1_555 -1.365 0.736 3.351 -0.908 7.010 38.779 0.222 1.913 3.457 10.452 1.354 39.394 4 BB_DT7DA8:DT26DA27_CC B 7 ? C 27 ? B 8 ? C 26 ? 1 A DA 5 1_555 B DT 10 1_555 A DA 6 1_555 B DT 9 1_555 0.144 -0.368 3.109 -5.011 5.210 34.457 -1.339 -0.941 2.974 8.677 8.346 35.185 5 BB_DA8DA9:DT25DT26_CC B 8 ? C 26 ? B 9 ? C 25 ? 1 A DA 6 1_555 B DT 9 1_555 A DT 7 1_555 B DA 8 1_555 -0.800 -0.936 3.314 -2.016 1.220 31.826 -1.927 1.084 3.319 2.221 3.671 31.911 6 BB_DA9DT10:DA24DT25_CC B 9 ? C 25 ? B 10 ? C 24 ? 1 A DT 7 1_555 B DA 8 1_555 A DT 8 1_555 B DA 7 1_555 -0.224 -0.300 3.335 -3.306 1.963 28.814 -1.037 -0.293 3.312 3.922 6.606 29.064 7 BB_DT10DT11:DA23DA24_CC B 10 ? C 24 ? B 11 ? C 23 ? 1 A DT 8 1_555 B DA 7 1_555 A DG 9 1_555 B DC 6 1_555 0.104 -0.111 3.172 5.212 10.320 30.503 -1.943 0.696 2.957 18.789 -9.488 32.572 8 BB_DT11DG12:DC22DA23_CC B 11 ? C 23 ? B 12 ? C 22 ? 1 A DG 9 1_555 B DC 6 1_555 A DA 10 1_555 B DT 5 1_555 -0.349 0.217 3.268 -6.380 10.052 38.379 -0.852 -0.232 3.238 14.861 9.432 40.117 9 BB_DG12DA13:DT21DC22_CC B 12 ? C 22 ? B 13 ? C 21 ? 1 A DA 10 1_555 B DT 5 1_555 A DA 11 1_555 B DT 4 1_555 -0.478 -0.093 3.082 -3.541 5.783 38.397 -0.802 0.311 3.067 8.709 5.333 38.968 10 BB_DA13DA14:DT20DT21_CC B 13 ? C 21 ? B 14 ? C 20 ? 1 A DA 11 1_555 B DT 4 1_555 A DG 12 1_555 B DC 3 1_555 0.438 -0.753 3.358 -0.501 4.010 32.210 -2.060 -0.872 3.236 7.192 0.899 32.456 11 BB_DA14DG15:DC19DT20_CC B 14 ? C 20 ? B 15 ? C 19 ? 1 A DG 12 1_555 B DC 3 1_555 A DG 13 1_555 B DC 2 1_555 -0.384 -1.346 3.170 0.927 8.295 25.842 -4.763 1.030 2.604 17.960 -2.007 27.135 12 BB_DG15DG16:DC18DC19_CC B 15 ? C 19 ? B 16 ? C 18 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Even-Skipped Homeodomain/DNA complex' # _atom_sites.entry_id 1IG7 _atom_sites.fract_transf_matrix[1][1] 0.029762 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016404 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012151 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_