data_1IHH
# 
_entry.id   1IHH 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.386 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1IHH         pdb_00001ihh 10.2210/pdb1ihh/pdb 
NDB   DD0040       ?            ?                   
RCSB  RCSB013271   ?            ?                   
WWPDB D_1000013271 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2001-10-26 
2 'Structure model' 1 1 2008-04-27 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2019-07-24 
5 'Structure model' 1 4 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Refinement description'    
5 5 'Structure model' 'Data collection'           
6 5 'Structure model' 'Database references'       
7 5 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' software               
2 5 'Structure model' chem_comp_atom         
3 5 'Structure model' chem_comp_bond         
4 5 'Structure model' database_2             
5 5 'Structure model' pdbx_struct_conn_angle 
6 5 'Structure model' struct_conn            
7 5 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_software.name'                              
2  5 'Structure model' '_database_2.pdbx_DOI'                        
3  5 'Structure model' '_database_2.pdbx_database_accession'         
4  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
5  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
6  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
7  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
8  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
9  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
16 5 'Structure model' '_pdbx_struct_conn_angle.value'               
17 5 'Structure model' '_struct_conn.pdbx_dist_value'                
18 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
19 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
20 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
21 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
22 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
23 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
24 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
25 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
26 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
27 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
28 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
29 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
30 5 'Structure model' '_struct_site.pdbx_auth_asym_id'              
31 5 'Structure model' '_struct_site.pdbx_auth_comp_id'              
32 5 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1IHH 
_pdbx_database_status.recvd_initial_deposition_date   2001-04-19 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Spingler, B.'      1 
'Whittington, D.A.' 2 
'Lippard, S.J.'     3 
# 
_citation.id                        primary 
_citation.title                     
'2.4 A crystal structure of an oxaliplatin 1,2-d(GpG) intrastrand cross-link in a DNA dodecamer duplex.' 
_citation.journal_abbrev            Inorg.Chem. 
_citation.journal_volume            40 
_citation.page_first                5596 
_citation.page_last                 5602 
_citation.year                      2001 
_citation.journal_id_ASTM           INOCAJ 
_citation.country                   US 
_citation.journal_id_ISSN           0020-1669 
_citation.journal_id_CSD            0009 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   11599959 
_citation.pdbx_database_id_DOI      10.1021/ic010790t 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Spingler, B.'      1 ? 
primary 'Whittington, D.A.' 2 ? 
primary 'Lippard, S.J.'     3 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3'" 3565.316 1  ? ? ? ? 
2 polymer     syn "5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'" 3761.468 1  ? ? ? ? 
3 non-polymer syn 'PLATINUM (II) ION'                            195.078  1  ? ? ? ? 
4 non-polymer syn 1R,2R-DIAMINOCYCLOHEXANE                       114.189  1  ? ? ? ? 
5 non-polymer syn 'BARIUM ION'                                   137.327  1  ? ? ? ? 
6 water       nat water                                          18.015   12 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DT)(DC)(DC)' CCTCTGGTCTCC A ? 
2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DG)(DA)(DC)(DC)(DA)(DG)(DA)(DG)(DG)' GGAGACCAGAGG B ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
3 'PLATINUM (II) ION'      PT  
4 1R,2R-DIAMINOCYCLOHEXANE DNH 
5 'BARIUM ION'             BA  
6 water                    HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DC n 
1 3  DT n 
1 4  DC n 
1 5  DT n 
1 6  DG n 
1 7  DG n 
1 8  DT n 
1 9  DC n 
1 10 DT n 
1 11 DC n 
1 12 DC n 
2 1  DG n 
2 2  DG n 
2 3  DA n 
2 4  DG n 
2 5  DA n 
2 6  DC n 
2 7  DC n 
2 8  DA n 
2 9  DG n 
2 10 DA n 
2 11 DG n 
2 12 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
BA  non-polymer   . 'BARIUM ION'                         ? 'Ba 2'            137.327 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DNH non-polymer   . 1R,2R-DIAMINOCYCLOHEXANE             ? 'C6 H14 N2'       114.189 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
PT  non-polymer   . 'PLATINUM (II) ION'                  ? 'Pt 2'            195.078 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C  A . n 
A 1 2  DC 2  2  2  DC C  A . n 
A 1 3  DT 3  3  3  DT T  A . n 
A 1 4  DC 4  4  4  DC C  A . n 
A 1 5  DT 5  5  5  DT T  A . n 
A 1 6  DG 6  6  6  DG +G A . n 
A 1 7  DG 7  7  7  DG +G A . n 
A 1 8  DT 8  8  8  DT T  A . n 
A 1 9  DC 9  9  9  DC C  A . n 
A 1 10 DT 10 10 10 DT T  A . n 
A 1 11 DC 11 11 11 DC C  A . n 
A 1 12 DC 12 12 12 DC C  A . n 
B 2 1  DG 1  1  1  DG G  B . n 
B 2 2  DG 2  2  2  DG G  B . n 
B 2 3  DA 3  3  3  DA A  B . n 
B 2 4  DG 4  4  4  DG G  B . n 
B 2 5  DA 5  5  5  DA A  B . n 
B 2 6  DC 6  6  6  DC C  B . n 
B 2 7  DC 7  7  7  DC C  B . n 
B 2 8  DA 8  8  8  DA A  B . n 
B 2 9  DG 9  9  9  DG G  B . n 
B 2 10 DA 10 10 10 DA A  B . n 
B 2 11 DG 11 11 11 DG G  B . n 
B 2 12 DG 12 12 12 DG G  B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 3 PT  1 41  40  PT  XXX A . 
D 4 DNH 1 40  40  DNH XXX A . 
E 5 BA  1 42  41  BA  BA  B . 
F 6 HOH 1 102 102 HOH HOH A . 
F 6 HOH 2 106 106 HOH HOH A . 
F 6 HOH 3 111 111 HOH HOH A . 
F 6 HOH 4 112 112 HOH HOH A . 
F 6 HOH 5 113 113 HOH HOH A . 
G 6 HOH 1 103 103 HOH HOH B . 
G 6 HOH 2 104 104 HOH HOH B . 
G 6 HOH 3 105 105 HOH HOH B . 
G 6 HOH 4 107 107 HOH HOH B . 
G 6 HOH 5 108 108 HOH HOH B . 
G 6 HOH 6 109 109 HOH HOH B . 
G 6 HOH 7 110 110 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
SHELXL-97 refinement       . ? 1 
CNS       refinement       . ? 2 
DENZO     'data reduction' . ? 3 
SCALEPACK 'data scaling'   . ? 4 
CNS       phasing          . ? 5 
# 
_cell.entry_id           1IHH 
_cell.length_a           41.942 
_cell.length_b           51.246 
_cell.length_c           87.049 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1IHH 
_symmetry.space_group_name_H-M             'I 2 2 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                23 
# 
_exptl.entry_id          1IHH 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   2 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.82 
_exptl_crystal.density_percent_sol   55 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            277 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.0 
_exptl_crystal_grow.pdbx_details    
'MPD, SODIUM CACODYLATE, SPERMINE*4HCl, BACL2, ETHYL ACETATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 MPD                 ? ? ? 
1 2 1 'SODIUM CACODYLATE' ? ? ? 
1 3 1 SPERMINE*4HCl       ? ? ? 
1 4 1 BaCl2               ? ? ? 
1 5 1 'ETHYL ACETATE'     ? ? ? 
# 
loop_
_diffrn.id 
_diffrn.ambient_temp 
_diffrn.ambient_temp_details 
_diffrn.crystal_id 
1 103 ? 1 
2 173 ? 1 
# 
loop_
_diffrn_detector.diffrn_id 
_diffrn_detector.detector 
_diffrn_detector.type 
_diffrn_detector.pdbx_collection_date 
_diffrn_detector.details 
1 'IMAGE PLATE' MARRESEARCH 2000-02-27 ? 
2 CCD           CUSTOM-MADE 2000-02-10 ? 
# 
loop_
_diffrn_radiation.diffrn_id 
_diffrn_radiation.wavelength_id 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l 
_diffrn_radiation.monochromator 
_diffrn_radiation.pdbx_diffrn_protocol 
_diffrn_radiation.pdbx_scattering_type 
1 1 M ? 'SINGLE WAVELENGTH' x-ray 
2 1 M ? MAD                 x-ray 
# 
loop_
_diffrn_radiation_wavelength.id 
_diffrn_radiation_wavelength.wavelength 
_diffrn_radiation_wavelength.wt 
1 0.970  1.0 
2 1.0721 1.0 
3 1.0724 1.0 
4 1.0277 1.0 
5 1.1206 1.0 
# 
loop_
_diffrn_source.diffrn_id 
_diffrn_source.source 
_diffrn_source.type 
_diffrn_source.pdbx_synchrotron_site 
_diffrn_source.pdbx_synchrotron_beamline 
_diffrn_source.pdbx_wavelength 
_diffrn_source.pdbx_wavelength_list 
1 SYNCHROTRON 'SSRL BEAMLINE BL9-1' SSRL BL9-1 0.970 0.970                       
2 SYNCHROTRON 'APS BEAMLINE 19-ID'  APS  19-ID ?     1.0721,1.0724,1.0277,1.1206 
# 
_reflns.entry_id                     1IHH 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   4 
_reflns.d_resolution_low             100 
_reflns.d_resolution_high            2.4 
_reflns.number_obs                   6296 
_reflns.number_all                   61465 
_reflns.percent_possible_obs         93.7 
_reflns.pdbx_Rmerge_I_obs            0.0890000 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        18.9 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              9.76 
_reflns.R_free_details               ? 
_reflns.pdbx_diffrn_id               1,2 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             2.40 
_reflns_shell.d_res_low              2.44 
_reflns_shell.percent_possible_all   69.0 
_reflns_shell.Rmerge_I_obs           0.3680000 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    4.5 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1IHH 
_refine.ls_number_reflns_obs                     4935 
_refine.ls_number_reflns_all                     6296 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          4.0 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_d_res_low                             100 
_refine.ls_d_res_high                            2.40 
_refine.ls_percent_reflns_obs                    93.7 
_refine.ls_R_factor_obs                          ? 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.2090000 
_refine.ls_R_factor_R_free                       0.2560000 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 10.0 
_refine.ls_number_reflns_R_free                  487 
_refine.ls_number_parameters                     2052 
_refine.ls_number_restraints                     2360 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               47.90 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               'FREE R' 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          MAD 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'ENGH AND HUBER' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        1IHH 
_refine_analyze.Luzzati_coordinate_error_obs    ? 
_refine_analyze.Luzzati_sigma_a_obs             ? 
_refine_analyze.Luzzati_d_res_low_obs           ? 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_hydrogen          0 
_refine_analyze.occupancy_sum_non_hydrogen      508 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   486 
_refine_hist.pdbx_number_atoms_ligand         10 
_refine_hist.number_atoms_solvent             12 
_refine_hist.number_atoms_total               508 
_refine_hist.d_res_high                       2.40 
_refine_hist.d_res_low                        100 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d              0.007 ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d             0.021 ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_dist        0.106 ? ? ? 'X-RAY DIFFRACTION' ? 
s_from_restr_planes   0.001 ? ? ? 'X-RAY DIFFRACTION' ? 
s_zero_chiral_vol     0.000 ? ? ? 'X-RAY DIFFRACTION' ? 
s_non_zero_chiral_vol 0.006 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_pdbx_refine.entry_id                                    1IHH 
_pdbx_refine.R_factor_all_no_cutoff                      ? 
_pdbx_refine.R_factor_obs_no_cutoff                      0.2300000 
_pdbx_refine.free_R_factor_no_cutoff                     0.2870000 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     10.0 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            487 
_pdbx_refine.R_factor_all_4sig_cutoff                    ? 
_pdbx_refine.R_factor_obs_4sig_cutoff                    0.2090000 
_pdbx_refine.free_R_factor_4sig_cutoff                   0.2560000 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   10.0 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          631 
_pdbx_refine.number_reflns_obs_4sig_cutoff               4935 
_pdbx_refine.number_reflns_obs_no_cutoff                 ? 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.free_R_error_no_cutoff                      ? 
# 
_database_PDB_matrix.entry_id          1IHH 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.000000 
_database_PDB_matrix.origx_vector[2]   0.000000 
_database_PDB_matrix.origx_vector[3]   0.000000 
# 
_struct.entry_id                  1IHH 
_struct.title                     
'2.4 ANGSTROM CRYSTAL STRUCTURE OF AN OXALIPLATIN 1,2-D(GPG) INTRASTRAND CROSS-LINK IN A DNA DODECAMER DUPLEX' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1IHH 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            
'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, OXALIPLATIN, MODIFIED, DEOXYNUCLEIC ACID, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
E N N 5 ? 
F N N 6 ? 
G N N 6 ? 
# 
loop_
_struct_ref.id 
_struct_ref.entity_id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
1 1 PDB 1IHH 1IHH ? ? ? 
2 2 PDB 1IHH 1IHH ? ? ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1IHH A 1 ? 12 ? 1IHH 1 ? 12 ? 1 12 
2 2 1IHH B 1 ? 12 ? 1IHH 1 ? 12 ? 1 12 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG  6  N7 ? ? ? 1_555 C PT  .  PT ? ? A DG  6  A PT  41  1_555 ? ? ? ? ? ? ?            1.979 ? ? 
metalc2  metalc ? ? A DG  6  O6 ? ? ? 1_555 C PT  .  PT ? ? A DG  6  A PT  41  1_555 ? ? ? ? ? ? ?            3.571 ? ? 
metalc3  metalc ? ? A DG  7  N7 ? ? ? 1_555 C PT  .  PT ? ? A DG  7  A PT  41  1_555 ? ? ? ? ? ? ?            1.945 ? ? 
metalc4  metalc ? ? A DG  7  O6 ? ? ? 1_555 C PT  .  PT ? ? A DG  7  A PT  41  1_555 ? ? ? ? ? ? ?            3.400 ? ? 
metalc5  metalc ? ? D DNH .  N1 ? ? ? 1_555 C PT  .  PT ? ? A DNH 40 A PT  41  1_555 ? ? ? ? ? ? ?            2.028 ? ? 
metalc6  metalc ? ? D DNH .  N2 ? ? ? 1_555 C PT  .  PT ? ? A DNH 40 A PT  41  1_555 ? ? ? ? ? ? ?            2.041 ? ? 
metalc7  metalc ? ? B DA  10 N7 ? ? ? 1_555 E BA  .  BA ? ? B DA  10 B BA  42  1_555 ? ? ? ? ? ? ?            3.111 ? ? 
metalc8  metalc ? ? B DG  11 O6 ? ? ? 1_555 E BA  .  BA ? ? B DG  11 B BA  42  1_555 ? ? ? ? ? ? ?            3.103 ? ? 
metalc9  metalc ? ? B DG  11 N7 ? ? ? 1_555 E BA  .  BA ? ? B DG  11 B BA  42  1_555 ? ? ? ? ? ? ?            2.556 ? ? 
metalc10 metalc ? ? E BA  .  BA ? ? ? 1_555 G HOH .  O  ? ? B BA  42 B HOH 107 1_555 ? ? ? ? ? ? ?            3.043 ? ? 
hydrog1  hydrog ? ? A DC  1  N3 ? ? ? 1_555 B DG  12 N1 ? ? A DC  1  B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DC  1  N4 ? ? ? 1_555 B DG  12 O6 ? ? A DC  1  B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DC  1  O2 ? ? ? 1_555 B DG  12 N2 ? ? A DC  1  B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DC  2  N3 ? ? ? 1_555 B DG  11 N1 ? ? A DC  2  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DC  2  N4 ? ? ? 1_555 B DG  11 O6 ? ? A DC  2  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DC  2  O2 ? ? ? 1_555 B DG  11 N2 ? ? A DC  2  B DG  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DT  3  N3 ? ? ? 1_555 B DA  10 N1 ? ? A DT  3  B DA  10  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ? ? A DT  3  O4 ? ? ? 1_555 B DA  10 N6 ? ? A DT  3  B DA  10  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DC  4  N3 ? ? ? 1_555 B DG  9  N1 ? ? A DC  4  B DG  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DC  4  N4 ? ? ? 1_555 B DG  9  O6 ? ? A DC  4  B DG  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ? ? A DC  4  O2 ? ? ? 1_555 B DG  9  N2 ? ? A DC  4  B DG  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ? ? A DT  5  N3 ? ? ? 1_555 B DA  8  N1 ? ? A DT  5  B DA  8   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ? ? A DT  5  O4 ? ? ? 1_555 B DA  8  N6 ? ? A DT  5  B DA  8   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ? ? A DG  6  N1 ? ? ? 1_555 B DC  7  N3 ? ? A DG  6  B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ? ? A DG  6  N2 ? ? ? 1_555 B DC  7  O2 ? ? A DG  6  B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ? ? A DG  6  O6 ? ? ? 1_555 B DC  7  N4 ? ? A DG  6  B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ? ? A DG  7  N1 ? ? ? 1_555 B DC  6  N3 ? ? A DG  7  B DC  6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ? ? A DG  7  N2 ? ? ? 1_555 B DC  6  O2 ? ? A DG  7  B DC  6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ? ? A DG  7  O6 ? ? ? 1_555 B DC  6  N4 ? ? A DG  7  B DC  6   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ? ? A DT  8  N3 ? ? ? 1_555 B DA  5  N1 ? ? A DT  8  B DA  5   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ? ? A DT  8  O4 ? ? ? 1_555 B DA  5  N6 ? ? A DT  8  B DA  5   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ? ? A DC  9  N3 ? ? ? 1_555 B DG  4  N1 ? ? A DC  9  B DG  4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ? ? A DC  9  N4 ? ? ? 1_555 B DG  4  O6 ? ? A DC  9  B DG  4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ? ? A DC  9  O2 ? ? ? 1_555 B DG  4  N2 ? ? A DC  9  B DG  4   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ? ? A DT  10 N3 ? ? ? 1_555 B DA  3  N1 ? ? A DT  10 B DA  3   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ? ? A DT  10 O4 ? ? ? 1_555 B DA  3  N6 ? ? A DT  10 B DA  3   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog27 hydrog ? ? A DC  11 N3 ? ? ? 1_555 B DG  2  N1 ? ? A DC  11 B DG  2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog28 hydrog ? ? A DC  11 N4 ? ? ? 1_555 B DG  2  O6 ? ? A DC  11 B DG  2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog29 hydrog ? ? A DC  11 O2 ? ? ? 1_555 B DG  2  N2 ? ? A DC  11 B DG  2   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog30 hydrog ? ? A DC  12 N3 ? ? ? 1_555 B DG  1  N1 ? ? A DC  12 B DG  1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog31 hydrog ? ? A DC  12 N4 ? ? ? 1_555 B DG  1  O6 ? ? A DC  12 B DG  1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog32 hydrog ? ? A DC  12 O2 ? ? ? 1_555 B DG  1  N2 ? ? A DC  12 B DG  1   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  N7 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG  6  ? A DG  6   ? 1_555 60.9  ? 
2  N7 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N7 ? A DG  7  ? A DG  7   ? 1_555 98.4  ? 
3  O6 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N7 ? A DG  7  ? A DG  7   ? 1_555 77.7  ? 
4  N7 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG  7  ? A DG  7   ? 1_555 112.4 ? 
5  O6 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG  7  ? A DG  7   ? 1_555 51.6  ? 
6  N7 ? A DG  7  ? A DG  7  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 O6 ? A DG  7  ? A DG  7   ? 1_555 65.4  ? 
7  N7 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH .  ? A DNH 40  ? 1_555 155.0 ? 
8  O6 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH .  ? A DNH 40  ? 1_555 104.6 ? 
9  N7 ? A DG  7  ? A DG  7  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH .  ? A DNH 40  ? 1_555 97.8  ? 
10 O6 ? A DG  7  ? A DG  7  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N1 ? D DNH .  ? A DNH 40  ? 1_555 58.6  ? 
11 N7 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH .  ? A DNH 40  ? 1_555 79.6  ? 
12 O6 ? A DG  6  ? A DG  6  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH .  ? A DNH 40  ? 1_555 100.8 ? 
13 N7 ? A DG  7  ? A DG  7  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH .  ? A DNH 40  ? 1_555 177.9 ? 
14 O6 ? A DG  7  ? A DG  7  ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH .  ? A DNH 40  ? 1_555 114.9 ? 
15 N1 ? D DNH .  ? A DNH 40 ? 1_555 PT ? C PT . ? A PT 41 ? 1_555 N2 ? D DNH .  ? A DNH 40  ? 1_555 84.0  ? 
16 N7 ? B DA  10 ? B DA  10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O6 ? B DG  11 ? B DG  11  ? 1_555 90.2  ? 
17 N7 ? B DA  10 ? B DA  10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 N7 ? B DG  11 ? B DG  11  ? 1_555 69.3  ? 
18 O6 ? B DG  11 ? B DG  11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 N7 ? B DG  11 ? B DG  11  ? 1_555 65.9  ? 
19 N7 ? B DA  10 ? B DA  10 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O  ? G HOH .  ? B HOH 107 ? 1_555 137.4 ? 
20 O6 ? B DG  11 ? B DG  11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O  ? G HOH .  ? B HOH 107 ? 1_555 86.1  ? 
21 N7 ? B DG  11 ? B DG  11 ? 1_555 BA ? E BA . ? B BA 42 ? 1_555 O  ? G HOH .  ? B HOH 107 ? 1_555 70.6  ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A PT  41 ? 3 'BINDING SITE FOR RESIDUE PT A 41'  
AC2 Software B BA  42 ? 3 'BINDING SITE FOR RESIDUE BA B 42'  
AC3 Software A DNH 40 ? 4 'BINDING SITE FOR RESIDUE DNH A 40' 
1   ?        ? ?   ?  ? ? ?                                   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 3 DG  A 6  ? DG  A 6   . ? 1_555 ? 
2  AC1 3 DG  A 7  ? DG  A 7   . ? 1_555 ? 
3  AC1 3 DNH D .  ? DNH A 40  . ? 1_555 ? 
4  AC2 3 DA  B 10 ? DA  B 10  . ? 1_555 ? 
5  AC2 3 DG  B 11 ? DG  B 11  . ? 1_555 ? 
6  AC2 3 HOH G .  ? HOH B 107 . ? 1_555 ? 
7  AC3 4 DT  A 5  ? DT  A 5   . ? 1_555 ? 
8  AC3 4 DG  A 6  ? DG  A 6   . ? 1_555 ? 
9  AC3 4 DG  A 7  ? DG  A 7   . ? 1_555 ? 
10 AC3 4 PT  C .  ? PT  A 41  . ? 1_555 ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O4'" A DC 1  ? ? "C1'" A DC 1  ? ? N1    A DC 1  ? ? 111.40 108.30 3.10  0.30 N 
2 1 "C3'" B DG 2  ? ? "C2'" B DG 2  ? ? "C1'" B DG 2  ? ? 96.86  102.40 -5.54 0.80 N 
3 1 "C3'" B DG 4  ? ? "C2'" B DG 4  ? ? "C1'" B DG 4  ? ? 97.52  102.40 -4.88 0.80 N 
4 1 "O4'" B DG 4  ? ? "C1'" B DG 4  ? ? N9    B DG 4  ? ? 113.12 108.30 4.82  0.30 N 
5 1 "O4'" B DA 8  ? ? "C4'" B DA 8  ? ? "C3'" B DA 8  ? ? 99.35  104.50 -5.15 0.40 N 
6 1 "C5'" B DA 8  ? ? "C4'" B DA 8  ? ? "C3'" B DA 8  ? ? 123.51 115.70 7.81  1.20 N 
7 1 "O4'" B DA 8  ? ? "C1'" B DA 8  ? ? N9    B DA 8  ? ? 110.83 108.30 2.53  0.30 N 
8 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9    B DA 10 ? ? 103.46 108.00 -4.54 0.70 N 
9 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9    B DG 11 ? ? 110.53 108.30 2.23  0.30 N 
# 
_struct_site_keywords.site_id   1 
_struct_site_keywords.text      'COVALENT PT-N BONDS' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
BA  BA     BA N N 1   
DA  OP3    O  N N 2   
DA  P      P  N N 3   
DA  OP1    O  N N 4   
DA  OP2    O  N N 5   
DA  "O5'"  O  N N 6   
DA  "C5'"  C  N N 7   
DA  "C4'"  C  N R 8   
DA  "O4'"  O  N N 9   
DA  "C3'"  C  N S 10  
DA  "O3'"  O  N N 11  
DA  "C2'"  C  N N 12  
DA  "C1'"  C  N R 13  
DA  N9     N  Y N 14  
DA  C8     C  Y N 15  
DA  N7     N  Y N 16  
DA  C5     C  Y N 17  
DA  C6     C  Y N 18  
DA  N6     N  N N 19  
DA  N1     N  Y N 20  
DA  C2     C  Y N 21  
DA  N3     N  Y N 22  
DA  C4     C  Y N 23  
DA  HOP3   H  N N 24  
DA  HOP2   H  N N 25  
DA  "H5'"  H  N N 26  
DA  "H5''" H  N N 27  
DA  "H4'"  H  N N 28  
DA  "H3'"  H  N N 29  
DA  "HO3'" H  N N 30  
DA  "H2'"  H  N N 31  
DA  "H2''" H  N N 32  
DA  "H1'"  H  N N 33  
DA  H8     H  N N 34  
DA  H61    H  N N 35  
DA  H62    H  N N 36  
DA  H2     H  N N 37  
DC  OP3    O  N N 38  
DC  P      P  N N 39  
DC  OP1    O  N N 40  
DC  OP2    O  N N 41  
DC  "O5'"  O  N N 42  
DC  "C5'"  C  N N 43  
DC  "C4'"  C  N R 44  
DC  "O4'"  O  N N 45  
DC  "C3'"  C  N S 46  
DC  "O3'"  O  N N 47  
DC  "C2'"  C  N N 48  
DC  "C1'"  C  N R 49  
DC  N1     N  N N 50  
DC  C2     C  N N 51  
DC  O2     O  N N 52  
DC  N3     N  N N 53  
DC  C4     C  N N 54  
DC  N4     N  N N 55  
DC  C5     C  N N 56  
DC  C6     C  N N 57  
DC  HOP3   H  N N 58  
DC  HOP2   H  N N 59  
DC  "H5'"  H  N N 60  
DC  "H5''" H  N N 61  
DC  "H4'"  H  N N 62  
DC  "H3'"  H  N N 63  
DC  "HO3'" H  N N 64  
DC  "H2'"  H  N N 65  
DC  "H2''" H  N N 66  
DC  "H1'"  H  N N 67  
DC  H41    H  N N 68  
DC  H42    H  N N 69  
DC  H5     H  N N 70  
DC  H6     H  N N 71  
DG  OP3    O  N N 72  
DG  P      P  N N 73  
DG  OP1    O  N N 74  
DG  OP2    O  N N 75  
DG  "O5'"  O  N N 76  
DG  "C5'"  C  N N 77  
DG  "C4'"  C  N R 78  
DG  "O4'"  O  N N 79  
DG  "C3'"  C  N S 80  
DG  "O3'"  O  N N 81  
DG  "C2'"  C  N N 82  
DG  "C1'"  C  N R 83  
DG  N9     N  Y N 84  
DG  C8     C  Y N 85  
DG  N7     N  Y N 86  
DG  C5     C  Y N 87  
DG  C6     C  N N 88  
DG  O6     O  N N 89  
DG  N1     N  N N 90  
DG  C2     C  N N 91  
DG  N2     N  N N 92  
DG  N3     N  N N 93  
DG  C4     C  Y N 94  
DG  HOP3   H  N N 95  
DG  HOP2   H  N N 96  
DG  "H5'"  H  N N 97  
DG  "H5''" H  N N 98  
DG  "H4'"  H  N N 99  
DG  "H3'"  H  N N 100 
DG  "HO3'" H  N N 101 
DG  "H2'"  H  N N 102 
DG  "H2''" H  N N 103 
DG  "H1'"  H  N N 104 
DG  H8     H  N N 105 
DG  H1     H  N N 106 
DG  H21    H  N N 107 
DG  H22    H  N N 108 
DNH C7     C  N N 109 
DNH C8     C  N N 110 
DNH C3     C  N R 111 
DNH C4     C  N R 112 
DNH C5     C  N N 113 
DNH C6     C  N N 114 
DNH N1     N  N N 115 
DNH N2     N  N N 116 
DNH H71    H  N N 117 
DNH H72    H  N N 118 
DNH H81    H  N N 119 
DNH H82    H  N N 120 
DNH H3     H  N N 121 
DNH H4     H  N N 122 
DNH H51    H  N N 123 
DNH H52    H  N N 124 
DNH H61    H  N N 125 
DNH H62    H  N N 126 
DNH H11    H  N N 127 
DNH H12    H  N N 128 
DNH H21    H  N N 129 
DNH H22    H  N N 130 
DT  OP3    O  N N 131 
DT  P      P  N N 132 
DT  OP1    O  N N 133 
DT  OP2    O  N N 134 
DT  "O5'"  O  N N 135 
DT  "C5'"  C  N N 136 
DT  "C4'"  C  N R 137 
DT  "O4'"  O  N N 138 
DT  "C3'"  C  N S 139 
DT  "O3'"  O  N N 140 
DT  "C2'"  C  N N 141 
DT  "C1'"  C  N R 142 
DT  N1     N  N N 143 
DT  C2     C  N N 144 
DT  O2     O  N N 145 
DT  N3     N  N N 146 
DT  C4     C  N N 147 
DT  O4     O  N N 148 
DT  C5     C  N N 149 
DT  C7     C  N N 150 
DT  C6     C  N N 151 
DT  HOP3   H  N N 152 
DT  HOP2   H  N N 153 
DT  "H5'"  H  N N 154 
DT  "H5''" H  N N 155 
DT  "H4'"  H  N N 156 
DT  "H3'"  H  N N 157 
DT  "HO3'" H  N N 158 
DT  "H2'"  H  N N 159 
DT  "H2''" H  N N 160 
DT  "H1'"  H  N N 161 
DT  H3     H  N N 162 
DT  H71    H  N N 163 
DT  H72    H  N N 164 
DT  H73    H  N N 165 
DT  H6     H  N N 166 
HOH O      O  N N 167 
HOH H1     H  N N 168 
HOH H2     H  N N 169 
PT  PT     PT N N 170 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DNH C7    C8     sing N N 113 
DNH C7    C5     sing N N 114 
DNH C7    H71    sing N N 115 
DNH C7    H72    sing N N 116 
DNH C8    C6     sing N N 117 
DNH C8    H81    sing N N 118 
DNH C8    H82    sing N N 119 
DNH C3    C4     sing N N 120 
DNH C3    C5     sing N N 121 
DNH C3    N1     sing N N 122 
DNH C3    H3     sing N N 123 
DNH C4    C6     sing N N 124 
DNH C4    N2     sing N N 125 
DNH C4    H4     sing N N 126 
DNH C5    H51    sing N N 127 
DNH C5    H52    sing N N 128 
DNH C6    H61    sing N N 129 
DNH C6    H62    sing N N 130 
DNH N1    H11    sing N N 131 
DNH N1    H12    sing N N 132 
DNH N2    H21    sing N N 133 
DNH N2    H22    sing N N 134 
DT  OP3   P      sing N N 135 
DT  OP3   HOP3   sing N N 136 
DT  P     OP1    doub N N 137 
DT  P     OP2    sing N N 138 
DT  P     "O5'"  sing N N 139 
DT  OP2   HOP2   sing N N 140 
DT  "O5'" "C5'"  sing N N 141 
DT  "C5'" "C4'"  sing N N 142 
DT  "C5'" "H5'"  sing N N 143 
DT  "C5'" "H5''" sing N N 144 
DT  "C4'" "O4'"  sing N N 145 
DT  "C4'" "C3'"  sing N N 146 
DT  "C4'" "H4'"  sing N N 147 
DT  "O4'" "C1'"  sing N N 148 
DT  "C3'" "O3'"  sing N N 149 
DT  "C3'" "C2'"  sing N N 150 
DT  "C3'" "H3'"  sing N N 151 
DT  "O3'" "HO3'" sing N N 152 
DT  "C2'" "C1'"  sing N N 153 
DT  "C2'" "H2'"  sing N N 154 
DT  "C2'" "H2''" sing N N 155 
DT  "C1'" N1     sing N N 156 
DT  "C1'" "H1'"  sing N N 157 
DT  N1    C2     sing N N 158 
DT  N1    C6     sing N N 159 
DT  C2    O2     doub N N 160 
DT  C2    N3     sing N N 161 
DT  N3    C4     sing N N 162 
DT  N3    H3     sing N N 163 
DT  C4    O4     doub N N 164 
DT  C4    C5     sing N N 165 
DT  C5    C7     sing N N 166 
DT  C5    C6     doub N N 167 
DT  C7    H71    sing N N 168 
DT  C7    H72    sing N N 169 
DT  C7    H73    sing N N 170 
DT  C6    H6     sing N N 171 
HOH O     H1     sing N N 172 
HOH O     H2     sing N N 173 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1IHH 'double helix'        
1IHH 'a-form double helix' 
1IHH 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 12 1_555 0.199  -0.281 -0.573 8.211   -0.914  0.048  1  A_DC1:DG12_B A 1  ? B 12 ? 19 1 
1 A DC 2  1_555 B DG 11 1_555 0.035  -0.297 0.081  -1.329  -11.546 -5.580 2  A_DC2:DG11_B A 2  ? B 11 ? 19 1 
1 A DT 3  1_555 B DA 10 1_555 0.001  -0.259 0.347  -10.893 -12.256 -2.040 3  A_DT3:DA10_B A 3  ? B 10 ? 20 1 
1 A DC 4  1_555 B DG 9  1_555 -0.167 -0.322 0.568  -8.942  -5.182  -3.996 4  A_DC4:DG9_B  A 4  ? B 9  ? 19 1 
1 A DT 5  1_555 B DA 8  1_555 0.115  -0.276 0.082  5.335   -2.918  2.182  5  A_DT5:DA8_B  A 5  ? B 8  ? 20 1 
1 A DG 6  1_555 B DC 7  1_555 -0.100 -0.342 0.291  19.330  -17.841 -3.289 6  A_DG6:DC7_B  A 6  ? B 7  ? 19 1 
1 A DG 7  1_555 B DC 6  1_555 0.260  -0.324 0.285  2.747   -17.927 1.110  7  A_DG7:DC6_B  A 7  ? B 6  ? 19 1 
1 A DT 8  1_555 B DA 5  1_555 0.050  -0.210 0.167  -9.682  -13.668 2.614  8  A_DT8:DA5_B  A 8  ? B 5  ? 20 1 
1 A DC 9  1_555 B DG 4  1_555 0.319  -0.249 0.290  -23.546 -2.091  -1.633 9  A_DC9:DG4_B  A 9  ? B 4  ? 19 1 
1 A DT 10 1_555 B DA 3  1_555 0.077  -0.133 0.164  -9.328  -3.804  -7.841 10 A_DT10:DA3_B A 10 ? B 3  ? 20 1 
1 A DC 11 1_555 B DG 2  1_555 -0.671 -0.356 -0.207 -1.891  -7.228  -6.778 11 A_DC11:DG2_B A 11 ? B 2  ? 19 1 
1 A DC 12 1_555 B DG 1  1_555 -0.139 -0.298 0.207  -2.480  -2.913  1.343  12 A_DC12:DG1_B A 12 ? B 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1  1_555 B DG 12 1_555 A DC 2  1_555 B DG 11 1_555 -0.789 -2.421 3.580 -5.463 6.475  31.595 -5.471 0.415  3.125 11.632 
9.815   32.683 1  AA_DC1DC2:DG11DG12_BB A 1  ? B 12 ? A 2  ? B 11 ? 
1 A DC 2  1_555 B DG 11 1_555 A DT 3  1_555 B DA 10 1_555 -0.552 -1.110 3.442 -1.214 7.854  31.067 -3.448 0.778  3.095 14.370 
2.221   32.043 2  AA_DC2DT3:DA10DG11_BB A 2  ? B 11 ? A 3  ? B 10 ? 
1 A DT 3  1_555 B DA 10 1_555 A DC 4  1_555 B DG 9  1_555 0.498  -1.671 3.123 -0.887 4.337  32.474 -3.650 -1.023 2.868 7.710  
1.577   32.766 3  AA_DT3DC4:DG9DA10_BB  A 3  ? B 10 ? A 4  ? B 9  ? 
1 A DC 4  1_555 B DG 9  1_555 A DT 5  1_555 B DA 8  1_555 -0.058 -1.487 2.777 3.034  1.782  34.852 -2.695 0.478  2.685 2.965  
-5.050  35.024 4  AA_DC4DT5:DA8DG9_BB   A 4  ? B 9  ? A 5  ? B 8  ? 
1 A DT 5  1_555 B DA 8  1_555 A DG 6  1_555 B DC 7  1_555 -0.714 -1.644 3.138 -1.221 8.067  21.212 -6.724 1.428  2.394 20.942 
3.169   22.710 5  AA_DT5DG6:DC7DA8_BB   A 5  ? B 8  ? A 6  ? B 7  ? 
1 A DG 6  1_555 B DC 7  1_555 A DG 7  1_555 B DC 6  1_555 1.054  -1.734 3.441 1.434  21.844 34.573 -4.711 -1.368 2.072 32.986 
-2.165  40.741 6  AA_DG6DG7:DC6DC7_BB   A 6  ? B 7  ? A 7  ? B 6  ? 
1 A DG 7  1_555 B DC 6  1_555 A DT 8  1_555 B DA 5  1_555 -0.193 -1.385 3.648 3.355  1.124  33.319 -2.608 0.946  3.565 1.953  
-5.830  33.501 7  AA_DG7DT8:DA5DC6_BB   A 7  ? B 6  ? A 8  ? B 5  ? 
1 A DT 8  1_555 B DA 5  1_555 A DC 9  1_555 B DG 4  1_555 0.277  -0.628 3.488 2.840  3.151  41.919 -1.219 -0.075 3.445 4.390  
-3.957  42.124 8  AA_DT8DC9:DG4DA5_BB   A 8  ? B 5  ? A 9  ? B 4  ? 
1 A DC 9  1_555 B DG 4  1_555 A DT 10 1_555 B DA 3  1_555 -1.030 -0.556 3.076 2.570  3.074  25.923 -1.985 2.904  2.878 6.799  
-5.685  26.226 9  AA_DC9DT10:DA3DG4_BB  A 9  ? B 4  ? A 10 ? B 3  ? 
1 A DT 10 1_555 B DA 3  1_555 A DC 11 1_555 B DG 2  1_555 0.495  -0.235 3.057 6.463  -3.071 33.592 0.060  0.126  3.105 -5.240 
-11.027 34.324 10 AA_DT10DC11:DG2DA3_BB A 10 ? B 3  ? A 11 ? B 2  ? 
1 A DC 11 1_555 B DG 2  1_555 A DC 12 1_555 B DG 1  1_555 0.478  -0.171 3.458 -1.990 3.840  31.900 -1.029 -1.235 3.380 6.947  
3.601   32.185 11 AA_DC11DC12:DG1DG2_BB A 11 ? B 2  ? A 12 ? B 1  ? 
# 
_atom_sites.entry_id                    1IHH 
_atom_sites.fract_transf_matrix[1][1]   0.023842 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.019514 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.011488 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
BA 
C  
N  
O  
P  
PT 
# 
loop_