data_1IVQ # _entry.id 1IVQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IVQ pdb_00001ivq 10.2210/pdb1ivq/pdb WWPDB D_1000174283 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-07-15 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2017-11-29 6 'Structure model' 1 5 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' Other 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Derived calculations' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_database_status 2 5 'Structure model' struct_conf 3 5 'Structure model' struct_conf_type 4 6 'Structure model' chem_comp 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' entity 9 6 'Structure model' pdbx_entity_nonpoly 10 6 'Structure model' struct_ref_seq_dif 11 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_pdbx_database_status.process_site' 2 6 'Structure model' '_chem_comp.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_entity.pdbx_description' 6 6 'Structure model' '_pdbx_entity_nonpoly.name' 7 6 'Structure model' '_struct_ref_seq_dif.details' 8 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IVQ _pdbx_database_status.recvd_initial_deposition_date 1993-03-18 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1IVP _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mulichak, A.M.' 1 'Watenpaugh, K.D.' 2 # _citation.id primary _citation.title ;The crystallographic structure of the protease from human immunodeficiency virus type 2 with two synthetic peptidic transition state analog inhibitors. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 268 _citation.page_first 13103 _citation.page_last 13109 _citation.year 1993 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8514751 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mulichak, A.M.' 1 ? primary 'Hui, J.O.' 2 ? primary 'Tomasselli, A.G.' 3 ? primary 'Heinrikson, R.L.' 4 ? primary 'Curry, K.A.' 5 ? primary 'Tomich, C.S.' 6 ? primary 'Thaisrivongs, S.' 7 ? primary 'Sawyer, T.K.' 8 ? primary 'Watenpaugh, K.D.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-2 PROTEASE' 10712.315 2 ? ? ? ? 2 non-polymer syn ;N~1~-{(1S,2S,4S)-1-(cyclohexylmethyl)-4-[(2,2-dimethylpropyl)carbamoyl]-2-hydroxy-5-methylhexyl}-N~2~-(quinolin-2-ylcar bonyl)-L-aspartamide ; 609.799 1 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTLEYKNVEIEVLNKKVRATIMTGDT PINIFGRNILTALGMSLNL ; _entity_poly.pdbx_seq_one_letter_code_can ;PQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTLEYKNVEIEVLNKKVRATIMTGDT PINIFGRNILTALGMSLNL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N~1~-{(1S,2S,4S)-1-(cyclohexylmethyl)-4-[(2,2-dimethylpropyl)carbamoyl]-2-hydroxy-5-methylhexyl}-N~2~-(quinolin-2-ylcar bonyl)-L-aspartamide ; 0PX 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 PHE n 1 4 SER n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 VAL n 1 11 VAL n 1 12 THR n 1 13 ALA n 1 14 TYR n 1 15 ILE n 1 16 GLU n 1 17 GLY n 1 18 GLN n 1 19 PRO n 1 20 VAL n 1 21 GLU n 1 22 VAL n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 SER n 1 32 ILE n 1 33 VAL n 1 34 ALA n 1 35 GLY n 1 36 ILE n 1 37 GLU n 1 38 LEU n 1 39 GLY n 1 40 ASN n 1 41 ASN n 1 42 TYR n 1 43 SER n 1 44 PRO n 1 45 LYS n 1 46 ILE n 1 47 VAL n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 ASN n 1 56 THR n 1 57 LEU n 1 58 GLU n 1 59 TYR n 1 60 LYS n 1 61 ASN n 1 62 VAL n 1 63 GLU n 1 64 ILE n 1 65 GLU n 1 66 VAL n 1 67 LEU n 1 68 ASN n 1 69 LYS n 1 70 LYS n 1 71 VAL n 1 72 ARG n 1 73 ALA n 1 74 THR n 1 75 ILE n 1 76 MET n 1 77 THR n 1 78 GLY n 1 79 ASP n 1 80 THR n 1 81 PRO n 1 82 ILE n 1 83 ASN n 1 84 ILE n 1 85 PHE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 ILE n 1 90 LEU n 1 91 THR n 1 92 ALA n 1 93 LEU n 1 94 GLY n 1 95 MET n 1 96 SER n 1 97 LEU n 1 98 ASN n 1 99 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11709 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0PX peptide-like . ;N~1~-{(1S,2S,4S)-1-(cyclohexylmethyl)-4-[(2,2-dimethylpropyl)carbamoyl]-2-hydroxy-5-methylhexyl}-N~2~-(quinolin-2-ylcar bonyl)-L-aspartamide ; U92163 'C34 H51 N5 O5' 609.799 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 LEU 99 99 99 LEU LEU A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 PHE 3 3 3 PHE PHE B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ILE 46 46 46 ILE ILE B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 MET 76 76 76 MET MET B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 ASP 79 79 79 ASP ASP B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 MET 95 95 95 MET MET B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 LEU 99 99 99 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0PX 1 100 1 0PX QNC A . D 3 HOH 1 300 300 HOH HOH A . D 3 HOH 2 301 301 HOH HOH A . D 3 HOH 3 302 302 HOH HOH A . D 3 HOH 4 303 303 HOH HOH A . D 3 HOH 5 304 304 HOH HOH A . D 3 HOH 6 305 305 HOH HOH A . D 3 HOH 7 306 306 HOH HOH A . D 3 HOH 8 307 307 HOH HOH A . D 3 HOH 9 308 308 HOH HOH A . D 3 HOH 10 309 309 HOH HOH A . D 3 HOH 11 311 311 HOH HOH A . D 3 HOH 12 333 333 HOH HOH A . D 3 HOH 13 334 334 HOH HOH A . D 3 HOH 14 335 335 HOH HOH A . D 3 HOH 15 336 336 HOH HOH A . D 3 HOH 16 337 337 HOH HOH A . D 3 HOH 17 339 339 HOH HOH A . D 3 HOH 18 340 340 HOH HOH A . D 3 HOH 19 341 341 HOH HOH A . E 3 HOH 1 310 310 HOH HOH B . E 3 HOH 2 312 312 HOH HOH B . E 3 HOH 3 313 313 HOH HOH B . E 3 HOH 4 314 314 HOH HOH B . E 3 HOH 5 315 315 HOH HOH B . E 3 HOH 6 316 316 HOH HOH B . E 3 HOH 7 317 317 HOH HOH B . E 3 HOH 8 318 318 HOH HOH B . E 3 HOH 9 319 319 HOH HOH B . E 3 HOH 10 320 320 HOH HOH B . E 3 HOH 11 321 321 HOH HOH B . E 3 HOH 12 322 322 HOH HOH B . E 3 HOH 13 323 323 HOH HOH B . E 3 HOH 14 324 324 HOH HOH B . E 3 HOH 15 325 325 HOH HOH B . E 3 HOH 16 326 326 HOH HOH B . E 3 HOH 17 327 327 HOH HOH B . E 3 HOH 18 328 328 HOH HOH B . E 3 HOH 19 329 329 HOH HOH B . E 3 HOH 20 330 330 HOH HOH B . E 3 HOH 21 331 331 HOH HOH B . E 3 HOH 22 332 332 HOH HOH B . E 3 HOH 23 338 338 HOH HOH B . E 3 HOH 24 342 342 HOH HOH B . E 3 HOH 25 343 343 HOH HOH B . E 3 HOH 26 344 344 HOH HOH B . E 3 HOH 27 345 345 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 2 ? CG ? A GLN 2 CG 2 1 Y 1 A GLN 2 ? CD ? A GLN 2 CD 3 1 Y 1 A GLN 2 ? OE1 ? A GLN 2 OE1 4 1 Y 1 A GLN 2 ? NE2 ? A GLN 2 NE2 5 1 Y 1 A LYS 7 ? CG ? A LYS 7 CG 6 1 Y 1 A LYS 7 ? CD ? A LYS 7 CD 7 1 Y 1 A LYS 7 ? CE ? A LYS 7 CE 8 1 Y 1 A LYS 7 ? NZ ? A LYS 7 NZ 9 1 Y 1 A GLU 63 ? CG ? A GLU 63 CG 10 1 Y 1 A GLU 63 ? CD ? A GLU 63 CD 11 1 Y 1 A GLU 63 ? OE1 ? A GLU 63 OE1 12 1 Y 1 A GLU 63 ? OE2 ? A GLU 63 OE2 13 1 Y 1 A LYS 69 ? CE ? A LYS 69 CE 14 1 Y 1 A LYS 69 ? NZ ? A LYS 69 NZ 15 1 Y 1 A LYS 70 ? CD ? A LYS 70 CD 16 1 Y 1 A LYS 70 ? CE ? A LYS 70 CE 17 1 Y 1 A LYS 70 ? NZ ? A LYS 70 NZ 18 1 Y 1 B ASN 41 ? CG ? B ASN 41 CG 19 1 Y 1 B ASN 41 ? OD1 ? B ASN 41 OD1 20 1 Y 1 B ASN 41 ? ND2 ? B ASN 41 ND2 21 1 Y 1 B LYS 70 ? CG ? B LYS 70 CG 22 1 Y 1 B LYS 70 ? CD ? B LYS 70 CD 23 1 Y 1 B LYS 70 ? CE ? B LYS 70 CE 24 1 Y 1 B LYS 70 ? NZ ? B LYS 70 NZ # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1IVQ _cell.length_a 32.200 _cell.length_b 46.230 _cell.length_c 135.590 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IVQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1IVQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_percent_sol 46.30 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1IVQ _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1860000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1482 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 1572 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.041200 _struct_ncs_oper.matrix[1][2] 0.960900 _struct_ncs_oper.matrix[1][3] -0.274000 _struct_ncs_oper.matrix[2][1] 0.960900 _struct_ncs_oper.matrix[2][2] -0.113300 _struct_ncs_oper.matrix[2][3] -0.252800 _struct_ncs_oper.matrix[3][1] -0.274000 _struct_ncs_oper.matrix[3][2] -0.252800 _struct_ncs_oper.matrix[3][3] -0.927900 _struct_ncs_oper.vector[1] -10.51990 _struct_ncs_oper.vector[2] 24.19690 _struct_ncs_oper.vector[3] 44.88150 # _database_PDB_matrix.entry_id 1IVQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IVQ _struct.title ;THE CRYSTALLOGRAPHIC STRUCTURE OF THE PROTEASE FROM HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 WITH TWO SYNTHETIC PEPTIDIC TRANSITION STATE ANALOG INHIBITORS ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IVQ _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'ACID PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV2RO _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P04584 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;TGRFFRTGPLGKEAPQLPRGPSSAGADTNSTPSGSSSGSTGEIYAAREKTERAERETIQGSDRGLTAPRAGGDTIQGATN RGLAAPQFSLWKRPVVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLNKKVRATI MTGDTPINIFGRNILTALGMSLNLPVAKVEPIKIMLKPGKDGPKLRQWPLTKEKIEALKEICEKMEKEGQLEEAPPTNPY NTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKRRITVLDVGDAYFSIPLHEDFRPYTAFTLPSVN NAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANKDVIIIQYMDDILIASDRTDLEHDRVVLQLKELLNGLGFST PDEKFQKDPPYHWMGYELWPTKWKLQKIQLPQKEIWTVNDIQKLVGVLNWAAQLYPGIKTKHLCRLIRGKMTLTEEVQWT ELAEAELEENRIILSQEQEGHYYQEEKELEATVQKDQENQWTYKIHQEEKILKVGKYAKVKNTHTNGIRLLAQVVQKIGK EALVIWGRIPKFHLPVEREIWEQWWDNYWQVTWIPDWDFVSTPPLVRLAFNLVGDPIPGAETFYTDGSCNRQSKEGKAGY VTDRGKDKVKKLEQTTNQQAELEAFAMALTDSGPKVNIIVDSQYVMGISASQPTESESKIVNQIIEEMIKKEAIYVAWVP AHKGIGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAE LGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQ SFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTEQEIQFLQAKN SKLKDFRVYFREGRDQLWKGPGELLWKGEGAVLVKVGTDIKIIPRRKAKIIRDYGGRQEMDSGSHLEGAREDGEMA ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IVQ A 1 ? 99 ? P04584 86 ? 184 ? 1 99 2 1 1IVQ B 1 ? 99 ? P04584 86 ? 184 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1IVQ LEU A 57 ? UNP P04584 LYS 142 conflict 57 1 2 1IVQ LEU B 57 ? UNP P04584 LYS 142 conflict 57 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5160 ? 1 MORE -15 ? 1 'SSA (A^2)' 9190 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE NON-CRYSTALLOGRAPHIC C(2) SYMMETRY RELATING THE TWO MONOMERS OF THE PROTEASE DIMER IS GIVEN ON THE MTRIX RECORDS BELOW. THIS TRANSFORMATION WILL YIELD APPROXIMATE COORDINATES FOR CHAIN B WHEN APPLIED TO CHAIN A. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1 GLY A 86 ? LEU A 93 ? GLY A 86 LEU A 93 1 ? 8 HELX_P HELX_P2 B1 GLY B 86 ? LEU B 93 ? GLY B 86 LEU B 93 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details B1 ? 4 ? B2 ? 4 ? B3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense B1 1 2 ? anti-parallel B1 2 3 ? anti-parallel B1 3 4 ? anti-parallel B2 1 2 ? anti-parallel B2 2 3 ? anti-parallel B2 3 4 ? anti-parallel B3 1 2 ? anti-parallel B3 2 3 ? anti-parallel B3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id B1 1 PRO A 1 ? PHE A 3 ? PRO A 1 PHE A 3 B1 2 SER B 96 ? LEU B 99 ? SER B 96 LEU B 99 B1 3 SER A 96 ? LEU A 99 ? SER A 96 LEU A 99 B1 4 PRO B 1 ? PHE B 3 ? PRO B 1 PHE B 3 B2 1 GLN A 18 ? VAL A 20 ? GLN A 18 VAL A 20 B2 2 ALA A 13 ? ILE A 15 ? ALA A 13 ILE A 15 B2 3 GLU A 63 ? VAL A 66 ? GLU A 63 VAL A 66 B2 4 LYS A 69 ? VAL A 71 ? LYS A 69 VAL A 71 B3 1 GLN B 18 ? VAL B 20 ? GLN B 18 VAL B 20 B3 2 ALA B 13 ? ILE B 15 ? ALA B 13 ILE B 15 B3 3 GLU B 63 ? VAL B 66 ? GLU B 63 VAL B 66 B3 4 LYS B 69 ? VAL B 71 ? LYS B 69 VAL B 71 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id B1 1 2 O PHE A 3 ? O PHE A 3 N LEU B 97 ? N LEU B 97 B1 2 3 O ASN B 98 ? O ASN B 98 N SER A 96 ? N SER A 96 B1 3 4 O LEU A 97 ? O LEU A 97 N PHE B 3 ? N PHE B 3 B2 1 2 O VAL A 20 ? O VAL A 20 N ALA A 13 ? N ALA A 13 B2 2 3 O TYR A 14 ? O TYR A 14 N GLU A 65 ? N GLU A 65 B2 3 4 O ILE A 64 ? O ILE A 64 N VAL A 71 ? N VAL A 71 B3 1 2 O VAL B 20 ? O VAL B 20 N ALA B 13 ? N ALA B 13 B3 2 3 O TYR B 14 ? O TYR B 14 N GLU B 65 ? N GLU B 65 B3 3 4 O ILE B 64 ? O ILE B 64 N VAL B 71 ? N VAL B 71 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 0PX _struct_site.pdbx_auth_seq_id 100 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE 0PX A 100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 LEU A 23 ? LEU A 23 . ? 1_555 ? 2 AC1 17 ASP A 25 ? ASP A 25 . ? 1_555 ? 3 AC1 17 GLY A 27 ? GLY A 27 . ? 1_555 ? 4 AC1 17 ALA A 28 ? ALA A 28 . ? 1_555 ? 5 AC1 17 ASP A 29 ? ASP A 29 . ? 1_555 ? 6 AC1 17 ASP A 30 ? ASP A 30 . ? 1_555 ? 7 AC1 17 GLY A 48 ? GLY A 48 . ? 1_555 ? 8 AC1 17 GLY A 49 ? GLY A 49 . ? 1_555 ? 9 AC1 17 ILE A 50 ? ILE A 50 . ? 1_555 ? 10 AC1 17 ILE A 82 ? ILE A 82 . ? 1_555 ? 11 AC1 17 HOH D . ? HOH A 336 . ? 1_555 ? 12 AC1 17 ASP B 25 ? ASP B 25 . ? 1_555 ? 13 AC1 17 ALA B 28 ? ALA B 28 . ? 1_555 ? 14 AC1 17 ILE B 32 ? ILE B 32 . ? 1_555 ? 15 AC1 17 VAL B 47 ? VAL B 47 . ? 1_555 ? 16 AC1 17 GLY B 49 ? GLY B 49 . ? 1_555 ? 17 AC1 17 THR B 80 ? THR B 80 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 29 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NH2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 8 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 5 ? ? CA A LEU 5 ? ? C A LEU 5 ? ? 125.34 110.20 15.14 1.90 N 2 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 124.43 120.30 4.13 0.50 N 3 1 N A THR 12 ? ? CA A THR 12 ? ? CB A THR 12 ? ? 121.75 110.30 11.45 1.90 N 4 1 CB A ASP 29 ? ? CG A ASP 29 ? ? OD1 A ASP 29 ? ? 111.53 118.30 -6.77 0.90 N 5 1 CB A ASP 30 ? ? CG A ASP 30 ? ? OD2 A ASP 30 ? ? 111.08 118.30 -7.22 0.90 N 6 1 N A ILE 36 ? ? CA A ILE 36 ? ? CB A ILE 36 ? ? 125.71 110.80 14.91 2.30 N 7 1 NE A ARG 72 ? ? CZ A ARG 72 ? ? NH2 A ARG 72 ? ? 115.99 120.30 -4.31 0.50 N 8 1 CD A ARG 87 ? ? NE A ARG 87 ? ? CZ A ARG 87 ? ? 132.48 123.60 8.88 1.40 N 9 1 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH1 A ARG 87 ? ? 126.43 120.30 6.13 0.50 N 10 1 CB A LEU 90 ? ? CA A LEU 90 ? ? C A LEU 90 ? ? 122.33 110.20 12.13 1.90 N 11 1 CA A LEU 99 ? ? C A LEU 99 ? ? O A LEU 99 ? ? 106.72 120.10 -13.38 2.10 N 12 1 CA B ASN 40 ? ? CB B ASN 40 ? ? CG B ASN 40 ? ? 128.00 113.40 14.60 2.20 N 13 1 CA B LYS 45 ? ? CB B LYS 45 ? ? CG B LYS 45 ? ? 135.77 113.40 22.37 2.20 N 14 1 NE B ARG 87 ? ? CZ B ARG 87 ? ? NH1 B ARG 87 ? ? 124.23 120.30 3.93 0.50 N 15 1 NE B ARG 87 ? ? CZ B ARG 87 ? ? NH2 B ARG 87 ? ? 113.81 120.30 -6.49 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 9 ? ? -62.43 61.08 2 1 THR A 26 ? ? -88.41 48.07 3 1 TYR A 42 ? ? -68.88 -163.96 4 1 SER A 43 ? ? 173.24 107.94 5 1 ASP A 79 ? ? -95.71 53.28 6 1 GLN B 2 ? ? 171.41 127.86 7 1 LEU B 5 ? ? -94.81 48.59 8 1 ILE B 15 ? ? -100.01 61.40 9 1 GLU B 16 ? ? 82.72 64.96 10 1 LEU B 67 ? ? 27.70 55.74 11 1 ALA B 73 ? ? -123.46 -164.76 # _pdbx_molecule_features.prd_id PRD_000348 _pdbx_molecule_features.name ;N~1~-{(1S,2S,4S)-1-(cyclohexylmethyl)-4-[(2,2-dimethylpropyl)carbamoyl]-2-hydroxy-5-methylhexyl}-N~2~-(quinolin-2- ylcarbonyl)-L-aspartamide ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000348 _pdbx_molecule.asym_id C # _pdbx_entry_details.entry_id 1IVQ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;CVP I 3 OF THE INHIBITOR IS THE DIPEPTIDE ISOSTERE CYCLOHEXYL ALANINE PSI(CHOH-CH2)VALINE. THE VALINE HAS A CH2 GROUP IN PLACE OF THE USUAL MAIN CHAIN N ATOM. APY I 5 WAS IDENTIFIED AS AMP IN THE PAPER CITED ON THE JRNL RECORDS ABOVE. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0PX O O N N 1 0PX C C N N 2 0PX N1 N Y N 3 0PX C2 C Y N 4 0PX C3 C Y N 5 0PX C4 C Y N 6 0PX C4A C Y N 7 0PX C5 C Y N 8 0PX C6 C Y N 9 0PX C7 C Y N 10 0PX C8 C Y N 11 0PX C8A C Y N 12 0PX N N N N 13 0PX CA C N S 14 0PX C1 C N N 15 0PX O1 O N N 16 0PX CB C N N 17 0PX CG C N N 18 0PX OD1 O N N 19 0PX ND2 N N N 20 0PX N2 N N N 21 0PX CA1 C N S 22 0PX CB1 C N N 23 0PX CG1 C N N 24 0PX CD1 C N N 25 0PX CD2 C N N 26 0PX CE1 C N N 27 0PX CE2 C N N 28 0PX CZ C N N 29 0PX CH C N S 30 0PX OH O N N 31 0PX CB11 C N N 32 0PX "CA'" C N S 33 0PX "CB'" C N N 34 0PX CG11 C N N 35 0PX CG2 C N N 36 0PX C9 C N N 37 0PX O2 O N N 38 0PX N3 N N N 39 0PX C11 C N N 40 0PX C21 C N N 41 0PX C31 C N N 42 0PX C41 C N N 43 0PX C51 C N N 44 0PX H3 H N N 45 0PX H4 H N N 46 0PX H5 H N N 47 0PX H6 H N N 48 0PX H7 H N N 49 0PX H8 H N N 50 0PX H H N N 51 0PX HA H N N 52 0PX HB2 H N N 53 0PX HB3 H N N 54 0PX HD21 H N N 55 0PX HD22 H N N 56 0PX H1 H N N 57 0PX HA1 H N N 58 0PX HB21 H N N 59 0PX HB31 H N N 60 0PX HG H N N 61 0PX HD12 H N N 62 0PX HD13 H N N 63 0PX HD23 H N N 64 0PX HD24 H N N 65 0PX HE12 H N N 66 0PX HE13 H N N 67 0PX HE23 H N N 68 0PX HE22 H N N 69 0PX HZ2 H N N 70 0PX HZ3 H N N 71 0PX HH H N N 72 0PX HO H N N 73 0PX HB11 H N N 74 0PX HB12 H N N 75 0PX "HA'" H N N 76 0PX "HB'" H N N 77 0PX HG11 H N N 78 0PX HG12 H N N 79 0PX HG13 H N N 80 0PX HG21 H N N 81 0PX HG22 H N N 82 0PX HG23 H N N 83 0PX HN2 H N N 84 0PX H11 H N N 85 0PX H12 H N N 86 0PX H31 H N N 87 0PX H32 H N N 88 0PX H33 H N N 89 0PX H41 H N N 90 0PX H42 H N N 91 0PX H43 H N N 92 0PX H51 H N N 93 0PX H52 H N N 94 0PX H53 H N N 95 ALA N N N N 96 ALA CA C N S 97 ALA C C N N 98 ALA O O N N 99 ALA CB C N N 100 ALA OXT O N N 101 ALA H H N N 102 ALA H2 H N N 103 ALA HA H N N 104 ALA HB1 H N N 105 ALA HB2 H N N 106 ALA HB3 H N N 107 ALA HXT H N N 108 ARG N N N N 109 ARG CA C N S 110 ARG C C N N 111 ARG O O N N 112 ARG CB C N N 113 ARG CG C N N 114 ARG CD C N N 115 ARG NE N N N 116 ARG CZ C N N 117 ARG NH1 N N N 118 ARG NH2 N N N 119 ARG OXT O N N 120 ARG H H N N 121 ARG H2 H N N 122 ARG HA H N N 123 ARG HB2 H N N 124 ARG HB3 H N N 125 ARG HG2 H N N 126 ARG HG3 H N N 127 ARG HD2 H N N 128 ARG HD3 H N N 129 ARG HE H N N 130 ARG HH11 H N N 131 ARG HH12 H N N 132 ARG HH21 H N N 133 ARG HH22 H N N 134 ARG HXT H N N 135 ASN N N N N 136 ASN CA C N S 137 ASN C C N N 138 ASN O O N N 139 ASN CB C N N 140 ASN CG C N N 141 ASN OD1 O N N 142 ASN ND2 N N N 143 ASN OXT O N N 144 ASN H H N N 145 ASN H2 H N N 146 ASN HA H N N 147 ASN HB2 H N N 148 ASN HB3 H N N 149 ASN HD21 H N N 150 ASN HD22 H N N 151 ASN HXT H N N 152 ASP N N N N 153 ASP CA C N S 154 ASP C C N N 155 ASP O O N N 156 ASP CB C N N 157 ASP CG C N N 158 ASP OD1 O N N 159 ASP OD2 O N N 160 ASP OXT O N N 161 ASP H H N N 162 ASP H2 H N N 163 ASP HA H N N 164 ASP HB2 H N N 165 ASP HB3 H N N 166 ASP HD2 H N N 167 ASP HXT H N N 168 GLN N N N N 169 GLN CA C N S 170 GLN C C N N 171 GLN O O N N 172 GLN CB C N N 173 GLN CG C N N 174 GLN CD C N N 175 GLN OE1 O N N 176 GLN NE2 N N N 177 GLN OXT O N N 178 GLN H H N N 179 GLN H2 H N N 180 GLN HA H N N 181 GLN HB2 H N N 182 GLN HB3 H N N 183 GLN HG2 H N N 184 GLN HG3 H N N 185 GLN HE21 H N N 186 GLN HE22 H N N 187 GLN HXT H N N 188 GLU N N N N 189 GLU CA C N S 190 GLU C C N N 191 GLU O O N N 192 GLU CB C N N 193 GLU CG C N N 194 GLU CD C N N 195 GLU OE1 O N N 196 GLU OE2 O N N 197 GLU OXT O N N 198 GLU H H N N 199 GLU H2 H N N 200 GLU HA H N N 201 GLU HB2 H N N 202 GLU HB3 H N N 203 GLU HG2 H N N 204 GLU HG3 H N N 205 GLU HE2 H N N 206 GLU HXT H N N 207 GLY N N N N 208 GLY CA C N N 209 GLY C C N N 210 GLY O O N N 211 GLY OXT O N N 212 GLY H H N N 213 GLY H2 H N N 214 GLY HA2 H N N 215 GLY HA3 H N N 216 GLY HXT H N N 217 HOH O O N N 218 HOH H1 H N N 219 HOH H2 H N N 220 ILE N N N N 221 ILE CA C N S 222 ILE C C N N 223 ILE O O N N 224 ILE CB C N S 225 ILE CG1 C N N 226 ILE CG2 C N N 227 ILE CD1 C N N 228 ILE OXT O N N 229 ILE H H N N 230 ILE H2 H N N 231 ILE HA H N N 232 ILE HB H N N 233 ILE HG12 H N N 234 ILE HG13 H N N 235 ILE HG21 H N N 236 ILE HG22 H N N 237 ILE HG23 H N N 238 ILE HD11 H N N 239 ILE HD12 H N N 240 ILE HD13 H N N 241 ILE HXT H N N 242 LEU N N N N 243 LEU CA C N S 244 LEU C C N N 245 LEU O O N N 246 LEU CB C N N 247 LEU CG C N N 248 LEU CD1 C N N 249 LEU CD2 C N N 250 LEU OXT O N N 251 LEU H H N N 252 LEU H2 H N N 253 LEU HA H N N 254 LEU HB2 H N N 255 LEU HB3 H N N 256 LEU HG H N N 257 LEU HD11 H N N 258 LEU HD12 H N N 259 LEU HD13 H N N 260 LEU HD21 H N N 261 LEU HD22 H N N 262 LEU HD23 H N N 263 LEU HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MET N N N N 290 MET CA C N S 291 MET C C N N 292 MET O O N N 293 MET CB C N N 294 MET CG C N N 295 MET SD S N N 296 MET CE C N N 297 MET OXT O N N 298 MET H H N N 299 MET H2 H N N 300 MET HA H N N 301 MET HB2 H N N 302 MET HB3 H N N 303 MET HG2 H N N 304 MET HG3 H N N 305 MET HE1 H N N 306 MET HE2 H N N 307 MET HE3 H N N 308 MET HXT H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 SER N N N N 350 SER CA C N S 351 SER C C N N 352 SER O O N N 353 SER CB C N N 354 SER OG O N N 355 SER OXT O N N 356 SER H H N N 357 SER H2 H N N 358 SER HA H N N 359 SER HB2 H N N 360 SER HB3 H N N 361 SER HG H N N 362 SER HXT H N N 363 THR N N N N 364 THR CA C N S 365 THR C C N N 366 THR O O N N 367 THR CB C N R 368 THR OG1 O N N 369 THR CG2 C N N 370 THR OXT O N N 371 THR H H N N 372 THR H2 H N N 373 THR HA H N N 374 THR HB H N N 375 THR HG1 H N N 376 THR HG21 H N N 377 THR HG22 H N N 378 THR HG23 H N N 379 THR HXT H N N 380 TRP N N N N 381 TRP CA C N S 382 TRP C C N N 383 TRP O O N N 384 TRP CB C N N 385 TRP CG C Y N 386 TRP CD1 C Y N 387 TRP CD2 C Y N 388 TRP NE1 N Y N 389 TRP CE2 C Y N 390 TRP CE3 C Y N 391 TRP CZ2 C Y N 392 TRP CZ3 C Y N 393 TRP CH2 C Y N 394 TRP OXT O N N 395 TRP H H N N 396 TRP H2 H N N 397 TRP HA H N N 398 TRP HB2 H N N 399 TRP HB3 H N N 400 TRP HD1 H N N 401 TRP HE1 H N N 402 TRP HE3 H N N 403 TRP HZ2 H N N 404 TRP HZ3 H N N 405 TRP HH2 H N N 406 TRP HXT H N N 407 TYR N N N N 408 TYR CA C N S 409 TYR C C N N 410 TYR O O N N 411 TYR CB C N N 412 TYR CG C Y N 413 TYR CD1 C Y N 414 TYR CD2 C Y N 415 TYR CE1 C Y N 416 TYR CE2 C Y N 417 TYR CZ C Y N 418 TYR OH O N N 419 TYR OXT O N N 420 TYR H H N N 421 TYR H2 H N N 422 TYR HA H N N 423 TYR HB2 H N N 424 TYR HB3 H N N 425 TYR HD1 H N N 426 TYR HD2 H N N 427 TYR HE1 H N N 428 TYR HE2 H N N 429 TYR HH H N N 430 TYR HXT H N N 431 VAL N N N N 432 VAL CA C N S 433 VAL C C N N 434 VAL O O N N 435 VAL CB C N N 436 VAL CG1 C N N 437 VAL CG2 C N N 438 VAL OXT O N N 439 VAL H H N N 440 VAL H2 H N N 441 VAL HA H N N 442 VAL HB H N N 443 VAL HG11 H N N 444 VAL HG12 H N N 445 VAL HG13 H N N 446 VAL HG21 H N N 447 VAL HG22 H N N 448 VAL HG23 H N N 449 VAL HXT H N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0PX O C doub N N 1 0PX C C2 sing N N 2 0PX N1 C2 doub Y N 3 0PX N1 C8A sing Y N 4 0PX C2 C3 sing Y N 5 0PX C3 C4 doub Y N 6 0PX C3 H3 sing N N 7 0PX C4 C4A sing Y N 8 0PX C4 H4 sing N N 9 0PX C4A C5 doub Y N 10 0PX C4A C8A sing Y N 11 0PX C5 C6 sing Y N 12 0PX C5 H5 sing N N 13 0PX C6 C7 doub Y N 14 0PX C6 H6 sing N N 15 0PX C7 C8 sing Y N 16 0PX C7 H7 sing N N 17 0PX C8 C8A doub Y N 18 0PX C8 H8 sing N N 19 0PX N CA sing N N 20 0PX N H sing N N 21 0PX CA C1 sing N N 22 0PX CA CB sing N N 23 0PX CA HA sing N N 24 0PX C1 O1 doub N N 25 0PX CB CG sing N N 26 0PX CB HB2 sing N N 27 0PX CB HB3 sing N N 28 0PX CG OD1 doub N N 29 0PX CG ND2 sing N N 30 0PX ND2 HD21 sing N N 31 0PX ND2 HD22 sing N N 32 0PX N2 CA1 sing N N 33 0PX N2 H1 sing N N 34 0PX CA1 CB1 sing N N 35 0PX CA1 CH sing N N 36 0PX CA1 HA1 sing N N 37 0PX CB1 CG1 sing N N 38 0PX CB1 HB21 sing N N 39 0PX CB1 HB31 sing N N 40 0PX CG1 CD1 sing N N 41 0PX CG1 CD2 sing N N 42 0PX CG1 HG sing N N 43 0PX CD1 CE1 sing N N 44 0PX CD1 HD12 sing N N 45 0PX CD1 HD13 sing N N 46 0PX CD2 CE2 sing N N 47 0PX CD2 HD23 sing N N 48 0PX CD2 HD24 sing N N 49 0PX CE1 CZ sing N N 50 0PX CE1 HE12 sing N N 51 0PX CE1 HE13 sing N N 52 0PX CE2 CZ sing N N 53 0PX CE2 HE23 sing N N 54 0PX CE2 HE22 sing N N 55 0PX CZ HZ2 sing N N 56 0PX CZ HZ3 sing N N 57 0PX CH OH sing N N 58 0PX CH CB11 sing N N 59 0PX CH HH sing N N 60 0PX OH HO sing N N 61 0PX CB11 "CA'" sing N N 62 0PX CB11 HB11 sing N N 63 0PX CB11 HB12 sing N N 64 0PX "CA'" "CB'" sing N N 65 0PX "CA'" C9 sing N N 66 0PX "CA'" "HA'" sing N N 67 0PX "CB'" CG11 sing N N 68 0PX "CB'" CG2 sing N N 69 0PX "CB'" "HB'" sing N N 70 0PX CG11 HG11 sing N N 71 0PX CG11 HG12 sing N N 72 0PX CG11 HG13 sing N N 73 0PX CG2 HG21 sing N N 74 0PX CG2 HG22 sing N N 75 0PX CG2 HG23 sing N N 76 0PX C9 O2 doub N N 77 0PX N3 C11 sing N N 78 0PX N3 HN2 sing N N 79 0PX C11 C21 sing N N 80 0PX C11 H11 sing N N 81 0PX C11 H12 sing N N 82 0PX C21 C31 sing N N 83 0PX C21 C41 sing N N 84 0PX C21 C51 sing N N 85 0PX C31 H31 sing N N 86 0PX C31 H32 sing N N 87 0PX C31 H33 sing N N 88 0PX C41 H41 sing N N 89 0PX C41 H42 sing N N 90 0PX C41 H43 sing N N 91 0PX C51 H51 sing N N 92 0PX C51 H52 sing N N 93 0PX C51 H53 sing N N 94 0PX C N sing N N 95 0PX C1 N2 sing N N 96 0PX C9 N3 sing N N 97 ALA N CA sing N N 98 ALA N H sing N N 99 ALA N H2 sing N N 100 ALA CA C sing N N 101 ALA CA CB sing N N 102 ALA CA HA sing N N 103 ALA C O doub N N 104 ALA C OXT sing N N 105 ALA CB HB1 sing N N 106 ALA CB HB2 sing N N 107 ALA CB HB3 sing N N 108 ALA OXT HXT sing N N 109 ARG N CA sing N N 110 ARG N H sing N N 111 ARG N H2 sing N N 112 ARG CA C sing N N 113 ARG CA CB sing N N 114 ARG CA HA sing N N 115 ARG C O doub N N 116 ARG C OXT sing N N 117 ARG CB CG sing N N 118 ARG CB HB2 sing N N 119 ARG CB HB3 sing N N 120 ARG CG CD sing N N 121 ARG CG HG2 sing N N 122 ARG CG HG3 sing N N 123 ARG CD NE sing N N 124 ARG CD HD2 sing N N 125 ARG CD HD3 sing N N 126 ARG NE CZ sing N N 127 ARG NE HE sing N N 128 ARG CZ NH1 sing N N 129 ARG CZ NH2 doub N N 130 ARG NH1 HH11 sing N N 131 ARG NH1 HH12 sing N N 132 ARG NH2 HH21 sing N N 133 ARG NH2 HH22 sing N N 134 ARG OXT HXT sing N N 135 ASN N CA sing N N 136 ASN N H sing N N 137 ASN N H2 sing N N 138 ASN CA C sing N N 139 ASN CA CB sing N N 140 ASN CA HA sing N N 141 ASN C O doub N N 142 ASN C OXT sing N N 143 ASN CB CG sing N N 144 ASN CB HB2 sing N N 145 ASN CB HB3 sing N N 146 ASN CG OD1 doub N N 147 ASN CG ND2 sing N N 148 ASN ND2 HD21 sing N N 149 ASN ND2 HD22 sing N N 150 ASN OXT HXT sing N N 151 ASP N CA sing N N 152 ASP N H sing N N 153 ASP N H2 sing N N 154 ASP CA C sing N N 155 ASP CA CB sing N N 156 ASP CA HA sing N N 157 ASP C O doub N N 158 ASP C OXT sing N N 159 ASP CB CG sing N N 160 ASP CB HB2 sing N N 161 ASP CB HB3 sing N N 162 ASP CG OD1 doub N N 163 ASP CG OD2 sing N N 164 ASP OD2 HD2 sing N N 165 ASP OXT HXT sing N N 166 GLN N CA sing N N 167 GLN N H sing N N 168 GLN N H2 sing N N 169 GLN CA C sing N N 170 GLN CA CB sing N N 171 GLN CA HA sing N N 172 GLN C O doub N N 173 GLN C OXT sing N N 174 GLN CB CG sing N N 175 GLN CB HB2 sing N N 176 GLN CB HB3 sing N N 177 GLN CG CD sing N N 178 GLN CG HG2 sing N N 179 GLN CG HG3 sing N N 180 GLN CD OE1 doub N N 181 GLN CD NE2 sing N N 182 GLN NE2 HE21 sing N N 183 GLN NE2 HE22 sing N N 184 GLN OXT HXT sing N N 185 GLU N CA sing N N 186 GLU N H sing N N 187 GLU N H2 sing N N 188 GLU CA C sing N N 189 GLU CA CB sing N N 190 GLU CA HA sing N N 191 GLU C O doub N N 192 GLU C OXT sing N N 193 GLU CB CG sing N N 194 GLU CB HB2 sing N N 195 GLU CB HB3 sing N N 196 GLU CG CD sing N N 197 GLU CG HG2 sing N N 198 GLU CG HG3 sing N N 199 GLU CD OE1 doub N N 200 GLU CD OE2 sing N N 201 GLU OE2 HE2 sing N N 202 GLU OXT HXT sing N N 203 GLY N CA sing N N 204 GLY N H sing N N 205 GLY N H2 sing N N 206 GLY CA C sing N N 207 GLY CA HA2 sing N N 208 GLY CA HA3 sing N N 209 GLY C O doub N N 210 GLY C OXT sing N N 211 GLY OXT HXT sing N N 212 HOH O H1 sing N N 213 HOH O H2 sing N N 214 ILE N CA sing N N 215 ILE N H sing N N 216 ILE N H2 sing N N 217 ILE CA C sing N N 218 ILE CA CB sing N N 219 ILE CA HA sing N N 220 ILE C O doub N N 221 ILE C OXT sing N N 222 ILE CB CG1 sing N N 223 ILE CB CG2 sing N N 224 ILE CB HB sing N N 225 ILE CG1 CD1 sing N N 226 ILE CG1 HG12 sing N N 227 ILE CG1 HG13 sing N N 228 ILE CG2 HG21 sing N N 229 ILE CG2 HG22 sing N N 230 ILE CG2 HG23 sing N N 231 ILE CD1 HD11 sing N N 232 ILE CD1 HD12 sing N N 233 ILE CD1 HD13 sing N N 234 ILE OXT HXT sing N N 235 LEU N CA sing N N 236 LEU N H sing N N 237 LEU N H2 sing N N 238 LEU CA C sing N N 239 LEU CA CB sing N N 240 LEU CA HA sing N N 241 LEU C O doub N N 242 LEU C OXT sing N N 243 LEU CB CG sing N N 244 LEU CB HB2 sing N N 245 LEU CB HB3 sing N N 246 LEU CG CD1 sing N N 247 LEU CG CD2 sing N N 248 LEU CG HG sing N N 249 LEU CD1 HD11 sing N N 250 LEU CD1 HD12 sing N N 251 LEU CD1 HD13 sing N N 252 LEU CD2 HD21 sing N N 253 LEU CD2 HD22 sing N N 254 LEU CD2 HD23 sing N N 255 LEU OXT HXT sing N N 256 LYS N CA sing N N 257 LYS N H sing N N 258 LYS N H2 sing N N 259 LYS CA C sing N N 260 LYS CA CB sing N N 261 LYS CA HA sing N N 262 LYS C O doub N N 263 LYS C OXT sing N N 264 LYS CB CG sing N N 265 LYS CB HB2 sing N N 266 LYS CB HB3 sing N N 267 LYS CG CD sing N N 268 LYS CG HG2 sing N N 269 LYS CG HG3 sing N N 270 LYS CD CE sing N N 271 LYS CD HD2 sing N N 272 LYS CD HD3 sing N N 273 LYS CE NZ sing N N 274 LYS CE HE2 sing N N 275 LYS CE HE3 sing N N 276 LYS NZ HZ1 sing N N 277 LYS NZ HZ2 sing N N 278 LYS NZ HZ3 sing N N 279 LYS OXT HXT sing N N 280 MET N CA sing N N 281 MET N H sing N N 282 MET N H2 sing N N 283 MET CA C sing N N 284 MET CA CB sing N N 285 MET CA HA sing N N 286 MET C O doub N N 287 MET C OXT sing N N 288 MET CB CG sing N N 289 MET CB HB2 sing N N 290 MET CB HB3 sing N N 291 MET CG SD sing N N 292 MET CG HG2 sing N N 293 MET CG HG3 sing N N 294 MET SD CE sing N N 295 MET CE HE1 sing N N 296 MET CE HE2 sing N N 297 MET CE HE3 sing N N 298 MET OXT HXT sing N N 299 PHE N CA sing N N 300 PHE N H sing N N 301 PHE N H2 sing N N 302 PHE CA C sing N N 303 PHE CA CB sing N N 304 PHE CA HA sing N N 305 PHE C O doub N N 306 PHE C OXT sing N N 307 PHE CB CG sing N N 308 PHE CB HB2 sing N N 309 PHE CB HB3 sing N N 310 PHE CG CD1 doub Y N 311 PHE CG CD2 sing Y N 312 PHE CD1 CE1 sing Y N 313 PHE CD1 HD1 sing N N 314 PHE CD2 CE2 doub Y N 315 PHE CD2 HD2 sing N N 316 PHE CE1 CZ doub Y N 317 PHE CE1 HE1 sing N N 318 PHE CE2 CZ sing Y N 319 PHE CE2 HE2 sing N N 320 PHE CZ HZ sing N N 321 PHE OXT HXT sing N N 322 PRO N CA sing N N 323 PRO N CD sing N N 324 PRO N H sing N N 325 PRO CA C sing N N 326 PRO CA CB sing N N 327 PRO CA HA sing N N 328 PRO C O doub N N 329 PRO C OXT sing N N 330 PRO CB CG sing N N 331 PRO CB HB2 sing N N 332 PRO CB HB3 sing N N 333 PRO CG CD sing N N 334 PRO CG HG2 sing N N 335 PRO CG HG3 sing N N 336 PRO CD HD2 sing N N 337 PRO CD HD3 sing N N 338 PRO OXT HXT sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # _atom_sites.entry_id 1IVQ _atom_sites.fract_transf_matrix[1][1] 0.031056 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007375 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'SEE REMARK 5 ABOVE.' 2 'SEE REMARK 6 ABOVE.' # loop_ _atom_type.symbol C N O S # loop_