HEADER DNA BINDING PROTEIN 06-DEC-02 1J1J TITLE CRYSTAL STRUCTURE OF HUMAN TRANSLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: M15[PREP4]; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE9 KEYWDS TESTIS/BRAIN RNA BINDING PROTEIN, SSDNA BINDING PROTEIN, RNA BINDING KEYWDS 2 PROTEIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.SUGIURA,C.SASAKI,T.HASEGAWA,T.KOHNO,S.SUGIO,H.MORIYAMA,M.KASAI, AUTHOR 2 T.MATSUZAKI REVDAT 5 27-DEC-23 1J1J 1 SEQADV REVDAT 4 13-JUL-11 1J1J 1 VERSN REVDAT 3 24-FEB-09 1J1J 1 VERSN REVDAT 2 09-MAR-04 1J1J 1 REMARK REVDAT 1 06-DEC-03 1J1J 0 JRNL AUTH I.SUGIURA,C.SASAKI,T.HASEGAWA,T.KOHNO,S.SUGIO,H.MORIYAMA, JRNL AUTH 2 M.KASAI,T.MATSUZAKI JRNL TITL STRUCTURE OF HUMAN TRANSLIN AT 2.2 A RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 674 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 15039555 JRNL DOI 10.1107/S0907444904002549 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 54339 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2899 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 57238 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 414 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J1J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-DEC-02. REMARK 100 THE DEPOSITION ID IS D_1000005513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL24XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.836 REMARK 200 MONOCHROMATOR : SI III CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57661 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, SODIUM CHLORIDE, REMARK 280 ACETATE, PH 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.17500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.17500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 64.71000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.63500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 64.71000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.63500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.17500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 64.71000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.63500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.17500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 64.71000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.63500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ASN A 218 REMARK 465 LYS A 219 REMARK 465 GLU A 220 REMARK 465 THR A 221 REMARK 465 ALA A 222 REMARK 465 ALA A 223 REMARK 465 ALA A 224 REMARK 465 CYS A 225 REMARK 465 VAL A 226 REMARK 465 GLU A 227 REMARK 465 LYS A 228 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASN B 218 REMARK 465 LYS B 219 REMARK 465 GLU B 220 REMARK 465 THR B 221 REMARK 465 ALA B 222 REMARK 465 ALA B 223 REMARK 465 ALA B 224 REMARK 465 CYS B 225 REMARK 465 VAL B 226 REMARK 465 GLU B 227 REMARK 465 LYS B 228 REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 ASN C 218 REMARK 465 LYS C 219 REMARK 465 GLU C 220 REMARK 465 THR C 221 REMARK 465 ALA C 222 REMARK 465 ALA C 223 REMARK 465 ALA C 224 REMARK 465 CYS C 225 REMARK 465 VAL C 226 REMARK 465 GLU C 227 REMARK 465 LYS C 228 REMARK 465 MET D -11 REMARK 465 ARG D -10 REMARK 465 GLY D -9 REMARK 465 SER D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 ASN D 218 REMARK 465 LYS D 219 REMARK 465 GLU D 220 REMARK 465 THR D 221 REMARK 465 ALA D 222 REMARK 465 ALA D 223 REMARK 465 ALA D 224 REMARK 465 CYS D 225 REMARK 465 VAL D 226 REMARK 465 GLU D 227 REMARK 465 LYS D 228 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 268 O HOH B 268 4555 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 55 C - N - CA ANGL. DEV. = 14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 128 -19.56 -46.37 REMARK 500 GLU A 130 9.30 175.22 REMARK 500 LYS A 131 96.44 29.02 REMARK 500 PHE A 133 95.99 48.03 REMARK 500 THR B 77 33.41 -81.02 REMARK 500 TYR B 85 2.59 -68.96 REMARK 500 ASP B 128 11.51 -56.31 REMARK 500 ARG B 129 58.99 -156.49 REMARK 500 GLU B 130 22.36 -153.75 REMARK 500 LYS B 131 109.58 41.51 REMARK 500 GLN C 47 -152.73 -131.40 REMARK 500 ALA C 49 -4.24 162.97 REMARK 500 GLN C 52 6.10 -68.24 REMARK 500 ALA C 81 22.62 -62.73 REMARK 500 ASP C 128 34.82 -69.20 REMARK 500 ARG C 129 16.97 -160.46 REMARK 500 GLU C 130 -90.27 -99.62 REMARK 500 LYS C 131 -105.54 -162.34 REMARK 500 PHE C 133 96.14 74.13 REMARK 500 LYS C 187 49.67 -73.50 REMARK 500 ASN C 188 135.67 -172.19 REMARK 500 ASP C 189 173.01 67.11 REMARK 500 ILE C 214 6.83 -64.12 REMARK 500 ARG C 215 -67.33 -128.62 REMARK 500 ALA D 49 58.31 -63.14 REMARK 500 PRO D 127 -161.76 -56.97 REMARK 500 ARG D 129 -89.02 71.07 REMARK 500 LYS D 131 -1.58 111.75 REMARK 500 ASN D 185 64.98 -106.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KEY RELATED DB: PDB DBREF 1J1J A 1 228 UNP Q15631 TSN_HUMAN 1 228 DBREF 1J1J B 1 228 UNP Q15631 TSN_HUMAN 1 228 DBREF 1J1J C 1 228 UNP Q15631 TSN_HUMAN 1 228 DBREF 1J1J D 1 228 UNP Q15631 TSN_HUMAN 1 228 SEQADV 1J1J MET A -11 UNP Q15631 EXPRESSION TAG SEQADV 1J1J ARG A -10 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY A -9 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER A -8 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -7 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -6 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -5 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -4 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -3 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS A -2 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY A -1 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER A 0 UNP Q15631 EXPRESSION TAG SEQADV 1J1J MET B -11 UNP Q15631 EXPRESSION TAG SEQADV 1J1J ARG B -10 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY B -9 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER B -8 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -7 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -6 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -5 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -4 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -3 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS B -2 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY B -1 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER B 0 UNP Q15631 EXPRESSION TAG SEQADV 1J1J MET C -11 UNP Q15631 EXPRESSION TAG SEQADV 1J1J ARG C -10 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY C -9 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER C -8 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -7 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -6 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -5 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -4 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -3 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS C -2 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY C -1 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER C 0 UNP Q15631 EXPRESSION TAG SEQADV 1J1J MET D -11 UNP Q15631 EXPRESSION TAG SEQADV 1J1J ARG D -10 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY D -9 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER D -8 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -7 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -6 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -5 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -4 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -3 UNP Q15631 EXPRESSION TAG SEQADV 1J1J HIS D -2 UNP Q15631 EXPRESSION TAG SEQADV 1J1J GLY D -1 UNP Q15631 EXPRESSION TAG SEQADV 1J1J SER D 0 UNP Q15631 EXPRESSION TAG SEQRES 1 A 240 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 240 SER VAL SER GLU ILE PHE VAL GLU LEU GLN GLY PHE LEU SEQRES 3 A 240 ALA ALA GLU GLN ASP ILE ARG GLU GLU ILE ARG LYS VAL SEQRES 4 A 240 VAL GLN SER LEU GLU GLN THR ALA ARG GLU ILE LEU THR SEQRES 5 A 240 LEU LEU GLN GLY VAL HIS GLN GLY ALA GLY PHE GLN ASP SEQRES 6 A 240 ILE PRO LYS ARG CYS LEU LYS ALA ARG GLU HIS PHE GLY SEQRES 7 A 240 THR VAL LYS THR HIS LEU THR SER LEU LYS THR LYS PHE SEQRES 8 A 240 PRO ALA GLU GLN TYR TYR ARG PHE HIS GLU HIS TRP ARG SEQRES 9 A 240 PHE VAL LEU GLN ARG LEU VAL PHE LEU ALA ALA PHE VAL SEQRES 10 A 240 VAL TYR LEU GLU THR GLU THR LEU VAL THR ARG GLU ALA SEQRES 11 A 240 VAL THR GLU ILE LEU GLY ILE GLU PRO ASP ARG GLU LYS SEQRES 12 A 240 GLY PHE HIS LEU ASP VAL GLU ASP TYR LEU SER GLY VAL SEQRES 13 A 240 LEU ILE LEU ALA SER GLU LEU SER ARG LEU SER VAL ASN SEQRES 14 A 240 SER VAL THR ALA GLY ASP TYR SER ARG PRO LEU HIS ILE SEQRES 15 A 240 SER THR PHE ILE ASN GLU LEU ASP SER GLY PHE ARG LEU SEQRES 16 A 240 LEU ASN LEU LYS ASN ASP SER LEU ARG LYS ARG TYR ASP SEQRES 17 A 240 GLY LEU LYS TYR ASP VAL LYS LYS VAL GLU GLU VAL VAL SEQRES 18 A 240 TYR ASP LEU SER ILE ARG GLY PHE ASN LYS GLU THR ALA SEQRES 19 A 240 ALA ALA CYS VAL GLU LYS SEQRES 1 B 240 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 B 240 SER VAL SER GLU ILE PHE VAL GLU LEU GLN GLY PHE LEU SEQRES 3 B 240 ALA ALA GLU GLN ASP ILE ARG GLU GLU ILE ARG LYS VAL SEQRES 4 B 240 VAL GLN SER LEU GLU GLN THR ALA ARG GLU ILE LEU THR SEQRES 5 B 240 LEU LEU GLN GLY VAL HIS GLN GLY ALA GLY PHE GLN ASP SEQRES 6 B 240 ILE PRO LYS ARG CYS LEU LYS ALA ARG GLU HIS PHE GLY SEQRES 7 B 240 THR VAL LYS THR HIS LEU THR SER LEU LYS THR LYS PHE SEQRES 8 B 240 PRO ALA GLU GLN TYR TYR ARG PHE HIS GLU HIS TRP ARG SEQRES 9 B 240 PHE VAL LEU GLN ARG LEU VAL PHE LEU ALA ALA PHE VAL SEQRES 10 B 240 VAL TYR LEU GLU THR GLU THR LEU VAL THR ARG GLU ALA SEQRES 11 B 240 VAL THR GLU ILE LEU GLY ILE GLU PRO ASP ARG GLU LYS SEQRES 12 B 240 GLY PHE HIS LEU ASP VAL GLU ASP TYR LEU SER GLY VAL SEQRES 13 B 240 LEU ILE LEU ALA SER GLU LEU SER ARG LEU SER VAL ASN SEQRES 14 B 240 SER VAL THR ALA GLY ASP TYR SER ARG PRO LEU HIS ILE SEQRES 15 B 240 SER THR PHE ILE ASN GLU LEU ASP SER GLY PHE ARG LEU SEQRES 16 B 240 LEU ASN LEU LYS ASN ASP SER LEU ARG LYS ARG TYR ASP SEQRES 17 B 240 GLY LEU LYS TYR ASP VAL LYS LYS VAL GLU GLU VAL VAL SEQRES 18 B 240 TYR ASP LEU SER ILE ARG GLY PHE ASN LYS GLU THR ALA SEQRES 19 B 240 ALA ALA CYS VAL GLU LYS SEQRES 1 C 240 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 C 240 SER VAL SER GLU ILE PHE VAL GLU LEU GLN GLY PHE LEU SEQRES 3 C 240 ALA ALA GLU GLN ASP ILE ARG GLU GLU ILE ARG LYS VAL SEQRES 4 C 240 VAL GLN SER LEU GLU GLN THR ALA ARG GLU ILE LEU THR SEQRES 5 C 240 LEU LEU GLN GLY VAL HIS GLN GLY ALA GLY PHE GLN ASP SEQRES 6 C 240 ILE PRO LYS ARG CYS LEU LYS ALA ARG GLU HIS PHE GLY SEQRES 7 C 240 THR VAL LYS THR HIS LEU THR SER LEU LYS THR LYS PHE SEQRES 8 C 240 PRO ALA GLU GLN TYR TYR ARG PHE HIS GLU HIS TRP ARG SEQRES 9 C 240 PHE VAL LEU GLN ARG LEU VAL PHE LEU ALA ALA PHE VAL SEQRES 10 C 240 VAL TYR LEU GLU THR GLU THR LEU VAL THR ARG GLU ALA SEQRES 11 C 240 VAL THR GLU ILE LEU GLY ILE GLU PRO ASP ARG GLU LYS SEQRES 12 C 240 GLY PHE HIS LEU ASP VAL GLU ASP TYR LEU SER GLY VAL SEQRES 13 C 240 LEU ILE LEU ALA SER GLU LEU SER ARG LEU SER VAL ASN SEQRES 14 C 240 SER VAL THR ALA GLY ASP TYR SER ARG PRO LEU HIS ILE SEQRES 15 C 240 SER THR PHE ILE ASN GLU LEU ASP SER GLY PHE ARG LEU SEQRES 16 C 240 LEU ASN LEU LYS ASN ASP SER LEU ARG LYS ARG TYR ASP SEQRES 17 C 240 GLY LEU LYS TYR ASP VAL LYS LYS VAL GLU GLU VAL VAL SEQRES 18 C 240 TYR ASP LEU SER ILE ARG GLY PHE ASN LYS GLU THR ALA SEQRES 19 C 240 ALA ALA CYS VAL GLU LYS SEQRES 1 D 240 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 D 240 SER VAL SER GLU ILE PHE VAL GLU LEU GLN GLY PHE LEU SEQRES 3 D 240 ALA ALA GLU GLN ASP ILE ARG GLU GLU ILE ARG LYS VAL SEQRES 4 D 240 VAL GLN SER LEU GLU GLN THR ALA ARG GLU ILE LEU THR SEQRES 5 D 240 LEU LEU GLN GLY VAL HIS GLN GLY ALA GLY PHE GLN ASP SEQRES 6 D 240 ILE PRO LYS ARG CYS LEU LYS ALA ARG GLU HIS PHE GLY SEQRES 7 D 240 THR VAL LYS THR HIS LEU THR SER LEU LYS THR LYS PHE SEQRES 8 D 240 PRO ALA GLU GLN TYR TYR ARG PHE HIS GLU HIS TRP ARG SEQRES 9 D 240 PHE VAL LEU GLN ARG LEU VAL PHE LEU ALA ALA PHE VAL SEQRES 10 D 240 VAL TYR LEU GLU THR GLU THR LEU VAL THR ARG GLU ALA SEQRES 11 D 240 VAL THR GLU ILE LEU GLY ILE GLU PRO ASP ARG GLU LYS SEQRES 12 D 240 GLY PHE HIS LEU ASP VAL GLU ASP TYR LEU SER GLY VAL SEQRES 13 D 240 LEU ILE LEU ALA SER GLU LEU SER ARG LEU SER VAL ASN SEQRES 14 D 240 SER VAL THR ALA GLY ASP TYR SER ARG PRO LEU HIS ILE SEQRES 15 D 240 SER THR PHE ILE ASN GLU LEU ASP SER GLY PHE ARG LEU SEQRES 16 D 240 LEU ASN LEU LYS ASN ASP SER LEU ARG LYS ARG TYR ASP SEQRES 17 D 240 GLY LEU LYS TYR ASP VAL LYS LYS VAL GLU GLU VAL VAL SEQRES 18 D 240 TYR ASP LEU SER ILE ARG GLY PHE ASN LYS GLU THR ALA SEQRES 19 D 240 ALA ALA CYS VAL GLU LYS FORMUL 5 HOH *414(H2 O) HELIX 1 1 SER A 2 GLN A 43 1 42 HELIX 2 2 GLY A 44 GLN A 47 5 4 HELIX 3 3 ASP A 53 LYS A 78 1 26 HELIX 4 4 PHE A 79 PHE A 79 5 1 HELIX 5 5 PRO A 80 GLU A 82 5 3 HELIX 6 6 GLN A 83 HIS A 88 1 6 HELIX 7 7 TRP A 91 GLU A 111 1 21 HELIX 8 8 THR A 115 GLY A 124 1 10 HELIX 9 9 ASP A 136 ALA A 161 1 26 HELIX 10 10 SER A 165 ARG A 182 1 18 HELIX 11 11 ASN A 188 ASP A 196 1 9 HELIX 12 12 GLY A 197 ILE A 214 1 18 HELIX 13 13 SER B 2 GLY B 44 1 43 HELIX 14 14 VAL B 45 GLN B 47 5 3 HELIX 15 15 PRO B 55 THR B 77 1 23 HELIX 16 16 LYS B 78 PHE B 79 5 2 HELIX 17 17 PRO B 80 GLU B 82 5 3 HELIX 18 18 GLN B 83 HIS B 88 1 6 HELIX 19 19 TRP B 91 GLU B 111 1 21 HELIX 20 20 THR B 115 LEU B 123 1 9 HELIX 21 21 ASP B 136 ALA B 161 1 26 HELIX 22 22 SER B 165 LEU B 183 1 19 HELIX 23 23 ASN B 188 GLY B 197 1 10 HELIX 24 24 GLY B 197 ARG B 215 1 19 HELIX 25 25 SER C 2 GLY C 44 1 43 HELIX 26 26 GLN C 52 LYS C 76 1 25 HELIX 27 27 GLN C 83 HIS C 88 1 6 HELIX 28 28 TRP C 91 GLU C 111 1 21 HELIX 29 29 THR C 115 LEU C 123 1 9 HELIX 30 30 ASP C 136 THR C 160 1 25 HELIX 31 31 SER C 165 LEU C 184 1 20 HELIX 32 32 SER C 190 ASP C 196 1 7 HELIX 33 33 GLY C 197 ILE C 214 1 18 HELIX 34 34 SER D 2 GLY D 44 1 43 HELIX 35 35 VAL D 45 GLN D 47 5 3 HELIX 36 36 ASP D 53 LYS D 78 1 26 HELIX 37 37 PRO D 80 GLU D 82 5 3 HELIX 38 38 GLN D 83 HIS D 88 1 6 HELIX 39 39 TRP D 91 GLU D 111 1 21 HELIX 40 40 THR D 115 LEU D 123 1 9 HELIX 41 41 ASP D 136 ALA D 161 1 26 HELIX 42 42 SER D 165 LEU D 184 1 20 HELIX 43 43 ASN D 188 ARG D 215 1 28 CISPEP 1 ILE B 54 PRO B 55 0 0.08 CRYST1 129.420 135.270 134.350 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007727 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007393 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007443 0.00000