data_1J1U # _entry.id 1J1U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1J1U pdb_00001j1u 10.2210/pdb1j1u/pdb NDB PR0092 ? ? RCSB RCSB005524 ? ? WWPDB D_1000005524 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-06-03 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1J1U _pdbx_database_status.recvd_initial_deposition_date 2002-12-17 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id my_001000009.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kobayashi, T.' 1 'Nureki, O.' 2 'Ishitani, R.' 3 'Tukalo, M.' 4 'Cusack, S.' 5 'Sakamoto, K.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion' _citation.journal_abbrev NAT.STRUCT.BIOL. _citation.journal_volume 10 _citation.page_first 425 _citation.page_last 432 _citation.year 2003 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12754495 _citation.pdbx_database_id_DOI 10.1038/nsb934 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kobayashi, T.' 1 ? primary 'Nureki, O.' 2 ? primary 'Ishitani, R.' 3 ? primary 'Yaremchuk, A.' 4 ? primary 'Tukalo, M.' 5 ? primary 'Cusack, S.' 6 ? primary 'Sakamoto, K.' 7 ? primary 'Yokoyama, S.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'tRNA(Tyr)' 24804.752 1 ? ? ? ? 2 polymer man 'Tyrosyl-tRNA synthetase' 35102.816 1 6.1.1.1 ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 4 non-polymer syn TYROSINE 181.189 1 ? ? ? ? 5 water nat water 18.015 364 ? ? ? ? # _entity_name_sys.entity_id 2 _entity_name_sys.name E.C.6.1.1.1 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CCGGCGGUAGUUCAGCCUGGUAGAACGGCGGACUGUAGAUCCGCAUGUCGCUGGUUCAAAUCCGGCCCGCCGGACCA CCGGCGGUAGUUCAGCCUGGUAGAACGGCGGACUGUAGAUCCGCAUGUCGCUGGUUCAAAUCCGGCCCGCCGGACCA B ? 2 'polypeptide(L)' no no ;MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL ; ;MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL ; A my_001000009.1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 TYROSINE TYR 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 C n 1 3 G n 1 4 G n 1 5 C n 1 6 G n 1 7 G n 1 8 U n 1 9 A n 1 10 G n 1 11 U n 1 12 U n 1 13 C n 1 14 A n 1 15 G n 1 16 C n 1 17 C n 1 18 U n 1 19 G n 1 20 G n 1 21 U n 1 22 A n 1 23 G n 1 24 A n 1 25 A n 1 26 C n 1 27 G n 1 28 G n 1 29 C n 1 30 G n 1 31 G n 1 32 A n 1 33 C n 1 34 U n 1 35 G n 1 36 U n 1 37 A n 1 38 G n 1 39 A n 1 40 U n 1 41 C n 1 42 C n 1 43 G n 1 44 C n 1 45 A n 1 46 U n 1 47 G n 1 48 U n 1 49 C n 1 50 G n 1 51 C n 1 52 U n 1 53 G n 1 54 G n 1 55 U n 1 56 U n 1 57 C n 1 58 A n 1 59 A n 1 60 A n 1 61 U n 1 62 C n 1 63 C n 1 64 G n 1 65 G n 1 66 C n 1 67 C n 1 68 C n 1 69 G n 1 70 C n 1 71 C n 1 72 G n 1 73 G n 1 74 A n 1 75 C n 1 76 C n 1 77 A n 2 1 MET n 2 2 ASP n 2 3 GLU n 2 4 PHE n 2 5 GLU n 2 6 MET n 2 7 ILE n 2 8 LYS n 2 9 ARG n 2 10 ASN n 2 11 THR n 2 12 SER n 2 13 GLU n 2 14 ILE n 2 15 ILE n 2 16 SER n 2 17 GLU n 2 18 GLU n 2 19 GLU n 2 20 LEU n 2 21 ARG n 2 22 GLU n 2 23 VAL n 2 24 LEU n 2 25 LYS n 2 26 LYS n 2 27 ASP n 2 28 GLU n 2 29 LYS n 2 30 SER n 2 31 ALA n 2 32 TYR n 2 33 ILE n 2 34 GLY n 2 35 PHE n 2 36 GLU n 2 37 PRO n 2 38 SER n 2 39 GLY n 2 40 LYS n 2 41 ILE n 2 42 HIS n 2 43 LEU n 2 44 GLY n 2 45 HIS n 2 46 TYR n 2 47 LEU n 2 48 GLN n 2 49 ILE n 2 50 LYS n 2 51 LYS n 2 52 MET n 2 53 ILE n 2 54 ASP n 2 55 LEU n 2 56 GLN n 2 57 ASN n 2 58 ALA n 2 59 GLY n 2 60 PHE n 2 61 ASP n 2 62 ILE n 2 63 ILE n 2 64 ILE n 2 65 LEU n 2 66 LEU n 2 67 ALA n 2 68 ASP n 2 69 LEU n 2 70 HIS n 2 71 ALA n 2 72 TYR n 2 73 LEU n 2 74 ASN n 2 75 GLN n 2 76 LYS n 2 77 GLY n 2 78 GLU n 2 79 LEU n 2 80 ASP n 2 81 GLU n 2 82 ILE n 2 83 ARG n 2 84 LYS n 2 85 ILE n 2 86 GLY n 2 87 ASP n 2 88 TYR n 2 89 ASN n 2 90 LYS n 2 91 LYS n 2 92 VAL n 2 93 PHE n 2 94 GLU n 2 95 ALA n 2 96 MET n 2 97 GLY n 2 98 LEU n 2 99 LYS n 2 100 ALA n 2 101 LYS n 2 102 TYR n 2 103 VAL n 2 104 TYR n 2 105 GLY n 2 106 SER n 2 107 GLU n 2 108 PHE n 2 109 GLN n 2 110 LEU n 2 111 ASP n 2 112 LYS n 2 113 ASP n 2 114 TYR n 2 115 THR n 2 116 LEU n 2 117 ASN n 2 118 VAL n 2 119 TYR n 2 120 ARG n 2 121 LEU n 2 122 ALA n 2 123 LEU n 2 124 LYS n 2 125 THR n 2 126 THR n 2 127 LEU n 2 128 LYS n 2 129 ARG n 2 130 ALA n 2 131 ARG n 2 132 ARG n 2 133 SER n 2 134 MET n 2 135 GLU n 2 136 LEU n 2 137 ILE n 2 138 ALA n 2 139 ARG n 2 140 GLU n 2 141 ASP n 2 142 GLU n 2 143 ASN n 2 144 PRO n 2 145 LYS n 2 146 VAL n 2 147 ALA n 2 148 GLU n 2 149 VAL n 2 150 ILE n 2 151 TYR n 2 152 PRO n 2 153 ILE n 2 154 MET n 2 155 GLN n 2 156 VAL n 2 157 ASN n 2 158 ASP n 2 159 ILE n 2 160 HIS n 2 161 TYR n 2 162 LEU n 2 163 GLY n 2 164 VAL n 2 165 ASP n 2 166 VAL n 2 167 ALA n 2 168 VAL n 2 169 GLY n 2 170 GLY n 2 171 MET n 2 172 GLU n 2 173 GLN n 2 174 ARG n 2 175 LYS n 2 176 ILE n 2 177 HIS n 2 178 MET n 2 179 LEU n 2 180 ALA n 2 181 ARG n 2 182 GLU n 2 183 LEU n 2 184 LEU n 2 185 PRO n 2 186 LYS n 2 187 LYS n 2 188 VAL n 2 189 VAL n 2 190 CYS n 2 191 ILE n 2 192 HIS n 2 193 ASN n 2 194 PRO n 2 195 VAL n 2 196 LEU n 2 197 THR n 2 198 GLY n 2 199 LEU n 2 200 ASP n 2 201 GLY n 2 202 GLU n 2 203 GLY n 2 204 LYS n 2 205 MET n 2 206 SER n 2 207 SER n 2 208 SER n 2 209 LYS n 2 210 GLY n 2 211 ASN n 2 212 PHE n 2 213 ILE n 2 214 ALA n 2 215 VAL n 2 216 ASP n 2 217 ASP n 2 218 SER n 2 219 PRO n 2 220 GLU n 2 221 GLU n 2 222 ILE n 2 223 ARG n 2 224 ALA n 2 225 LYS n 2 226 ILE n 2 227 LYS n 2 228 LYS n 2 229 ALA n 2 230 TYR n 2 231 CYS n 2 232 PRO n 2 233 ALA n 2 234 GLY n 2 235 VAL n 2 236 VAL n 2 237 GLU n 2 238 GLY n 2 239 ASN n 2 240 PRO n 2 241 ILE n 2 242 MET n 2 243 GLU n 2 244 ILE n 2 245 ALA n 2 246 LYS n 2 247 TYR n 2 248 PHE n 2 249 LEU n 2 250 GLU n 2 251 TYR n 2 252 PRO n 2 253 LEU n 2 254 THR n 2 255 ILE n 2 256 LYS n 2 257 ARG n 2 258 PRO n 2 259 GLU n 2 260 LYS n 2 261 PHE n 2 262 GLY n 2 263 GLY n 2 264 ASP n 2 265 LEU n 2 266 THR n 2 267 VAL n 2 268 ASN n 2 269 SER n 2 270 TYR n 2 271 GLU n 2 272 GLU n 2 273 LEU n 2 274 GLU n 2 275 SER n 2 276 LEU n 2 277 PHE n 2 278 LYS n 2 279 ASN n 2 280 LYS n 2 281 GLU n 2 282 LEU n 2 283 HIS n 2 284 PRO n 2 285 MET n 2 286 ASP n 2 287 LEU n 2 288 LYS n 2 289 ASN n 2 290 ALA n 2 291 VAL n 2 292 ALA n 2 293 GLU n 2 294 GLU n 2 295 LEU n 2 296 ILE n 2 297 LYS n 2 298 ILE n 2 299 LEU n 2 300 GLU n 2 301 PRO n 2 302 ILE n 2 303 ARG n 2 304 LYS n 2 305 ARG n 2 306 LEU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Methanocaldococcus _entity_src_gen.pdbx_gene_src_gene TYRS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2190 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs in Methanococcus jannaschii.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 501 501 C C B . n A 1 2 C 2 502 502 C C B . n A 1 3 G 3 503 503 G G B . n A 1 4 G 4 504 504 G G B . n A 1 5 C 5 505 505 C C B . n A 1 6 G 6 506 506 G G B . n A 1 7 G 7 507 507 G G B . n A 1 8 U 8 508 508 U U B . n A 1 9 A 9 509 509 A A B . n A 1 10 G 10 510 510 G G B . n A 1 11 U 11 511 511 U U B . n A 1 12 U 12 512 512 U U B . n A 1 13 C 13 513 513 C C B . n A 1 14 A 14 514 514 A A B . n A 1 15 G 15 515 515 G G B . n A 1 16 C 16 516 516 C C B . n A 1 17 C 17 517 517 C C B . n A 1 18 U 18 518 518 U U B . n A 1 19 G 19 519 519 G G B . n A 1 20 G 20 520 520 G G B . n A 1 21 U 21 521 521 U U B . n A 1 22 A 22 522 522 A A B . n A 1 23 G 23 523 523 G G B . n A 1 24 A 24 524 524 A A B . n A 1 25 A 25 525 525 A A B . n A 1 26 C 26 526 526 C C B . n A 1 27 G 27 527 527 G G B . n A 1 28 G 28 528 528 G G B . n A 1 29 C 29 529 529 C C B . n A 1 30 G 30 530 530 G G B . n A 1 31 G 31 531 531 G G B . n A 1 32 A 32 532 532 A A B . n A 1 33 C 33 533 533 C C B . n A 1 34 U 34 534 534 U U B . n A 1 35 G 35 535 535 G G B . n A 1 36 U 36 536 536 U U B . n A 1 37 A 37 537 537 A A B . n A 1 38 G 38 538 538 G G B . n A 1 39 A 39 539 539 A A B . n A 1 40 U 40 540 540 U U B . n A 1 41 C 41 541 541 C C B . n A 1 42 C 42 542 542 C C B . n A 1 43 G 43 543 543 G G B . n A 1 44 C 44 544 544 C C B . n A 1 45 A 45 545 545 A A B . n A 1 46 U 46 546 546 U U B . n A 1 47 G 47 547 547 G G B . n A 1 48 U 48 548 548 U U B . n A 1 49 C 49 549 549 C C B . n A 1 50 G 50 550 550 G G B . n A 1 51 C 51 551 551 C C B . n A 1 52 U 52 552 552 U U B . n A 1 53 G 53 553 553 G G B . n A 1 54 G 54 554 554 G G B . n A 1 55 U 55 555 555 U U B . n A 1 56 U 56 556 556 U U B . n A 1 57 C 57 557 557 C C B . n A 1 58 A 58 558 558 A A B . n A 1 59 A 59 559 559 A A B . n A 1 60 A 60 560 560 A A B . n A 1 61 U 61 561 561 U U B . n A 1 62 C 62 562 562 C C B . n A 1 63 C 63 563 563 C C B . n A 1 64 G 64 564 564 G G B . n A 1 65 G 65 565 565 G G B . n A 1 66 C 66 566 566 C C B . n A 1 67 C 67 567 567 C C B . n A 1 68 C 68 568 568 C C B . n A 1 69 G 69 569 569 G G B . n A 1 70 C 70 570 570 C C B . n A 1 71 C 71 571 571 C C B . n A 1 72 G 72 572 572 G G B . n A 1 73 G 73 573 573 G G B . n A 1 74 A 74 574 574 A A B . n A 1 75 C 75 575 ? ? ? B . n A 1 76 C 76 576 ? ? ? B . n A 1 77 A 77 577 ? ? ? B . n B 2 1 MET 1 1 1 MET MET A . n B 2 2 ASP 2 2 2 ASP ASP A . n B 2 3 GLU 3 3 3 GLU GLU A . n B 2 4 PHE 4 4 4 PHE PHE A . n B 2 5 GLU 5 5 5 GLU GLU A . n B 2 6 MET 6 6 6 MET MET A . n B 2 7 ILE 7 7 7 ILE ILE A . n B 2 8 LYS 8 8 8 LYS LYS A . n B 2 9 ARG 9 9 9 ARG ARG A . n B 2 10 ASN 10 10 10 ASN ASN A . n B 2 11 THR 11 11 11 THR THR A . n B 2 12 SER 12 12 12 SER SER A . n B 2 13 GLU 13 13 13 GLU GLU A . n B 2 14 ILE 14 14 14 ILE ILE A . n B 2 15 ILE 15 15 15 ILE ILE A . n B 2 16 SER 16 16 16 SER SER A . n B 2 17 GLU 17 17 17 GLU GLU A . n B 2 18 GLU 18 18 18 GLU GLU A . n B 2 19 GLU 19 19 19 GLU GLU A . n B 2 20 LEU 20 20 20 LEU LEU A . n B 2 21 ARG 21 21 21 ARG ARG A . n B 2 22 GLU 22 22 22 GLU GLU A . n B 2 23 VAL 23 23 23 VAL VAL A . n B 2 24 LEU 24 24 24 LEU LEU A . n B 2 25 LYS 25 25 25 LYS LYS A . n B 2 26 LYS 26 26 26 LYS LYS A . n B 2 27 ASP 27 27 27 ASP ASP A . n B 2 28 GLU 28 28 28 GLU GLU A . n B 2 29 LYS 29 29 29 LYS LYS A . n B 2 30 SER 30 30 30 SER SER A . n B 2 31 ALA 31 31 31 ALA ALA A . n B 2 32 TYR 32 32 32 TYR TYR A . n B 2 33 ILE 33 33 33 ILE ILE A . n B 2 34 GLY 34 34 34 GLY GLY A . n B 2 35 PHE 35 35 35 PHE PHE A . n B 2 36 GLU 36 36 36 GLU GLU A . n B 2 37 PRO 37 37 37 PRO PRO A . n B 2 38 SER 38 38 38 SER SER A . n B 2 39 GLY 39 39 39 GLY GLY A . n B 2 40 LYS 40 40 40 LYS LYS A . n B 2 41 ILE 41 41 41 ILE ILE A . n B 2 42 HIS 42 42 42 HIS HIS A . n B 2 43 LEU 43 43 43 LEU LEU A . n B 2 44 GLY 44 44 44 GLY GLY A . n B 2 45 HIS 45 45 45 HIS HIS A . n B 2 46 TYR 46 46 46 TYR TYR A . n B 2 47 LEU 47 47 47 LEU LEU A . n B 2 48 GLN 48 48 48 GLN GLN A . n B 2 49 ILE 49 49 49 ILE ILE A . n B 2 50 LYS 50 50 50 LYS LYS A . n B 2 51 LYS 51 51 51 LYS LYS A . n B 2 52 MET 52 52 52 MET MET A . n B 2 53 ILE 53 53 53 ILE ILE A . n B 2 54 ASP 54 54 54 ASP ASP A . n B 2 55 LEU 55 55 55 LEU LEU A . n B 2 56 GLN 56 56 56 GLN GLN A . n B 2 57 ASN 57 57 57 ASN ASN A . n B 2 58 ALA 58 58 58 ALA ALA A . n B 2 59 GLY 59 59 59 GLY GLY A . n B 2 60 PHE 60 60 60 PHE PHE A . n B 2 61 ASP 61 61 61 ASP ASP A . n B 2 62 ILE 62 62 62 ILE ILE A . n B 2 63 ILE 63 63 63 ILE ILE A . n B 2 64 ILE 64 64 64 ILE ILE A . n B 2 65 LEU 65 65 65 LEU LEU A . n B 2 66 LEU 66 66 66 LEU LEU A . n B 2 67 ALA 67 67 67 ALA ALA A . n B 2 68 ASP 68 68 68 ASP ASP A . n B 2 69 LEU 69 69 69 LEU LEU A . n B 2 70 HIS 70 70 70 HIS HIS A . n B 2 71 ALA 71 71 71 ALA ALA A . n B 2 72 TYR 72 72 72 TYR TYR A . n B 2 73 LEU 73 73 73 LEU LEU A . n B 2 74 ASN 74 74 74 ASN ASN A . n B 2 75 GLN 75 75 75 GLN GLN A . n B 2 76 LYS 76 76 76 LYS LYS A . n B 2 77 GLY 77 77 77 GLY GLY A . n B 2 78 GLU 78 78 78 GLU GLU A . n B 2 79 LEU 79 79 79 LEU LEU A . n B 2 80 ASP 80 80 80 ASP ASP A . n B 2 81 GLU 81 81 81 GLU GLU A . n B 2 82 ILE 82 82 82 ILE ILE A . n B 2 83 ARG 83 83 83 ARG ARG A . n B 2 84 LYS 84 84 84 LYS LYS A . n B 2 85 ILE 85 85 85 ILE ILE A . n B 2 86 GLY 86 86 86 GLY GLY A . n B 2 87 ASP 87 87 87 ASP ASP A . n B 2 88 TYR 88 88 88 TYR TYR A . n B 2 89 ASN 89 89 89 ASN ASN A . n B 2 90 LYS 90 90 90 LYS LYS A . n B 2 91 LYS 91 91 91 LYS LYS A . n B 2 92 VAL 92 92 92 VAL VAL A . n B 2 93 PHE 93 93 93 PHE PHE A . n B 2 94 GLU 94 94 94 GLU GLU A . n B 2 95 ALA 95 95 95 ALA ALA A . n B 2 96 MET 96 96 96 MET MET A . n B 2 97 GLY 97 97 97 GLY GLY A . n B 2 98 LEU 98 98 98 LEU LEU A . n B 2 99 LYS 99 99 99 LYS LYS A . n B 2 100 ALA 100 100 100 ALA ALA A . n B 2 101 LYS 101 101 101 LYS LYS A . n B 2 102 TYR 102 102 102 TYR TYR A . n B 2 103 VAL 103 103 103 VAL VAL A . n B 2 104 TYR 104 104 104 TYR TYR A . n B 2 105 GLY 105 105 105 GLY GLY A . n B 2 106 SER 106 106 106 SER SER A . n B 2 107 GLU 107 107 107 GLU GLU A . n B 2 108 PHE 108 108 108 PHE PHE A . n B 2 109 GLN 109 109 109 GLN GLN A . n B 2 110 LEU 110 110 110 LEU LEU A . n B 2 111 ASP 111 111 111 ASP ASP A . n B 2 112 LYS 112 112 112 LYS LYS A . n B 2 113 ASP 113 113 113 ASP ASP A . n B 2 114 TYR 114 114 114 TYR TYR A . n B 2 115 THR 115 115 115 THR THR A . n B 2 116 LEU 116 116 116 LEU LEU A . n B 2 117 ASN 117 117 117 ASN ASN A . n B 2 118 VAL 118 118 118 VAL VAL A . n B 2 119 TYR 119 119 119 TYR TYR A . n B 2 120 ARG 120 120 120 ARG ARG A . n B 2 121 LEU 121 121 121 LEU LEU A . n B 2 122 ALA 122 122 122 ALA ALA A . n B 2 123 LEU 123 123 123 LEU LEU A . n B 2 124 LYS 124 124 124 LYS LYS A . n B 2 125 THR 125 125 125 THR THR A . n B 2 126 THR 126 126 126 THR THR A . n B 2 127 LEU 127 127 127 LEU LEU A . n B 2 128 LYS 128 128 128 LYS LYS A . n B 2 129 ARG 129 129 129 ARG ARG A . n B 2 130 ALA 130 130 130 ALA ALA A . n B 2 131 ARG 131 131 131 ARG ARG A . n B 2 132 ARG 132 132 132 ARG ARG A . n B 2 133 SER 133 133 133 SER SER A . n B 2 134 MET 134 134 134 MET MET A . n B 2 135 GLU 135 135 135 GLU GLU A . n B 2 136 LEU 136 136 136 LEU LEU A . n B 2 137 ILE 137 137 137 ILE ILE A . n B 2 138 ALA 138 138 138 ALA ALA A . n B 2 139 ARG 139 139 139 ARG ARG A . n B 2 140 GLU 140 140 140 GLU GLU A . n B 2 141 ASP 141 141 141 ASP ASP A . n B 2 142 GLU 142 142 142 GLU GLU A . n B 2 143 ASN 143 143 143 ASN ASN A . n B 2 144 PRO 144 144 144 PRO PRO A . n B 2 145 LYS 145 145 145 LYS LYS A . n B 2 146 VAL 146 146 146 VAL VAL A . n B 2 147 ALA 147 147 147 ALA ALA A . n B 2 148 GLU 148 148 148 GLU GLU A . n B 2 149 VAL 149 149 149 VAL VAL A . n B 2 150 ILE 150 150 150 ILE ILE A . n B 2 151 TYR 151 151 151 TYR TYR A . n B 2 152 PRO 152 152 152 PRO PRO A . n B 2 153 ILE 153 153 153 ILE ILE A . n B 2 154 MET 154 154 154 MET MET A . n B 2 155 GLN 155 155 155 GLN GLN A . n B 2 156 VAL 156 156 156 VAL VAL A . n B 2 157 ASN 157 157 157 ASN ASN A . n B 2 158 ASP 158 158 158 ASP ASP A . n B 2 159 ILE 159 159 159 ILE ILE A . n B 2 160 HIS 160 160 160 HIS HIS A . n B 2 161 TYR 161 161 161 TYR TYR A . n B 2 162 LEU 162 162 162 LEU LEU A . n B 2 163 GLY 163 163 163 GLY GLY A . n B 2 164 VAL 164 164 164 VAL VAL A . n B 2 165 ASP 165 165 165 ASP ASP A . n B 2 166 VAL 166 166 166 VAL VAL A . n B 2 167 ALA 167 167 167 ALA ALA A . n B 2 168 VAL 168 168 168 VAL VAL A . n B 2 169 GLY 169 169 169 GLY GLY A . n B 2 170 GLY 170 170 170 GLY GLY A . n B 2 171 MET 171 171 171 MET MET A . n B 2 172 GLU 172 172 172 GLU GLU A . n B 2 173 GLN 173 173 173 GLN GLN A . n B 2 174 ARG 174 174 174 ARG ARG A . n B 2 175 LYS 175 175 175 LYS LYS A . n B 2 176 ILE 176 176 176 ILE ILE A . n B 2 177 HIS 177 177 177 HIS HIS A . n B 2 178 MET 178 178 178 MET MET A . n B 2 179 LEU 179 179 179 LEU LEU A . n B 2 180 ALA 180 180 180 ALA ALA A . n B 2 181 ARG 181 181 181 ARG ARG A . n B 2 182 GLU 182 182 182 GLU GLU A . n B 2 183 LEU 183 183 183 LEU LEU A . n B 2 184 LEU 184 184 184 LEU LEU A . n B 2 185 PRO 185 185 185 PRO PRO A . n B 2 186 LYS 186 186 186 LYS LYS A . n B 2 187 LYS 187 187 187 LYS LYS A . n B 2 188 VAL 188 188 188 VAL VAL A . n B 2 189 VAL 189 189 189 VAL VAL A . n B 2 190 CYS 190 190 190 CYS CYS A . n B 2 191 ILE 191 191 191 ILE ILE A . n B 2 192 HIS 192 192 192 HIS HIS A . n B 2 193 ASN 193 193 193 ASN ASN A . n B 2 194 PRO 194 194 194 PRO PRO A . n B 2 195 VAL 195 195 195 VAL VAL A . n B 2 196 LEU 196 196 196 LEU LEU A . n B 2 197 THR 197 197 197 THR THR A . n B 2 198 GLY 198 198 198 GLY GLY A . n B 2 199 LEU 199 199 199 LEU LEU A . n B 2 200 ASP 200 200 200 ASP ASP A . n B 2 201 GLY 201 201 201 GLY GLY A . n B 2 202 GLU 202 202 202 GLU GLU A . n B 2 203 GLY 203 203 ? ? ? A . n B 2 204 LYS 204 204 ? ? ? A . n B 2 205 MET 205 205 ? ? ? A . n B 2 206 SER 206 206 ? ? ? A . n B 2 207 SER 207 207 ? ? ? A . n B 2 208 SER 208 208 ? ? ? A . n B 2 209 LYS 209 209 ? ? ? A . n B 2 210 GLY 210 210 210 GLY GLY A . n B 2 211 ASN 211 211 211 ASN ASN A . n B 2 212 PHE 212 212 212 PHE PHE A . n B 2 213 ILE 213 213 213 ILE ILE A . n B 2 214 ALA 214 214 214 ALA ALA A . n B 2 215 VAL 215 215 215 VAL VAL A . n B 2 216 ASP 216 216 216 ASP ASP A . n B 2 217 ASP 217 217 217 ASP ASP A . n B 2 218 SER 218 218 218 SER SER A . n B 2 219 PRO 219 219 219 PRO PRO A . n B 2 220 GLU 220 220 220 GLU GLU A . n B 2 221 GLU 221 221 221 GLU GLU A . n B 2 222 ILE 222 222 222 ILE ILE A . n B 2 223 ARG 223 223 223 ARG ARG A . n B 2 224 ALA 224 224 224 ALA ALA A . n B 2 225 LYS 225 225 225 LYS LYS A . n B 2 226 ILE 226 226 226 ILE ILE A . n B 2 227 LYS 227 227 227 LYS LYS A . n B 2 228 LYS 228 228 228 LYS LYS A . n B 2 229 ALA 229 229 229 ALA ALA A . n B 2 230 TYR 230 230 230 TYR TYR A . n B 2 231 CYS 231 231 231 CYS CYS A . n B 2 232 PRO 232 232 232 PRO PRO A . n B 2 233 ALA 233 233 233 ALA ALA A . n B 2 234 GLY 234 234 234 GLY GLY A . n B 2 235 VAL 235 235 235 VAL VAL A . n B 2 236 VAL 236 236 236 VAL VAL A . n B 2 237 GLU 237 237 237 GLU GLU A . n B 2 238 GLY 238 238 238 GLY GLY A . n B 2 239 ASN 239 239 239 ASN ASN A . n B 2 240 PRO 240 240 240 PRO PRO A . n B 2 241 ILE 241 241 241 ILE ILE A . n B 2 242 MET 242 242 242 MET MET A . n B 2 243 GLU 243 243 243 GLU GLU A . n B 2 244 ILE 244 244 244 ILE ILE A . n B 2 245 ALA 245 245 245 ALA ALA A . n B 2 246 LYS 246 246 246 LYS LYS A . n B 2 247 TYR 247 247 247 TYR TYR A . n B 2 248 PHE 248 248 248 PHE PHE A . n B 2 249 LEU 249 249 249 LEU LEU A . n B 2 250 GLU 250 250 250 GLU GLU A . n B 2 251 TYR 251 251 251 TYR TYR A . n B 2 252 PRO 252 252 252 PRO PRO A . n B 2 253 LEU 253 253 253 LEU LEU A . n B 2 254 THR 254 254 254 THR THR A . n B 2 255 ILE 255 255 255 ILE ILE A . n B 2 256 LYS 256 256 256 LYS LYS A . n B 2 257 ARG 257 257 257 ARG ARG A . n B 2 258 PRO 258 258 258 PRO PRO A . n B 2 259 GLU 259 259 259 GLU GLU A . n B 2 260 LYS 260 260 260 LYS LYS A . n B 2 261 PHE 261 261 261 PHE PHE A . n B 2 262 GLY 262 262 262 GLY GLY A . n B 2 263 GLY 263 263 263 GLY GLY A . n B 2 264 ASP 264 264 264 ASP ASP A . n B 2 265 LEU 265 265 265 LEU LEU A . n B 2 266 THR 266 266 266 THR THR A . n B 2 267 VAL 267 267 267 VAL VAL A . n B 2 268 ASN 268 268 268 ASN ASN A . n B 2 269 SER 269 269 269 SER SER A . n B 2 270 TYR 270 270 270 TYR TYR A . n B 2 271 GLU 271 271 271 GLU GLU A . n B 2 272 GLU 272 272 272 GLU GLU A . n B 2 273 LEU 273 273 273 LEU LEU A . n B 2 274 GLU 274 274 274 GLU GLU A . n B 2 275 SER 275 275 275 SER SER A . n B 2 276 LEU 276 276 276 LEU LEU A . n B 2 277 PHE 277 277 277 PHE PHE A . n B 2 278 LYS 278 278 278 LYS LYS A . n B 2 279 ASN 279 279 279 ASN ASN A . n B 2 280 LYS 280 280 280 LYS LYS A . n B 2 281 GLU 281 281 281 GLU GLU A . n B 2 282 LEU 282 282 282 LEU LEU A . n B 2 283 HIS 283 283 283 HIS HIS A . n B 2 284 PRO 284 284 284 PRO PRO A . n B 2 285 MET 285 285 285 MET MET A . n B 2 286 ASP 286 286 286 ASP ASP A . n B 2 287 LEU 287 287 287 LEU LEU A . n B 2 288 LYS 288 288 288 LYS LYS A . n B 2 289 ASN 289 289 289 ASN ASN A . n B 2 290 ALA 290 290 290 ALA ALA A . n B 2 291 VAL 291 291 291 VAL VAL A . n B 2 292 ALA 292 292 292 ALA ALA A . n B 2 293 GLU 293 293 293 GLU GLU A . n B 2 294 GLU 294 294 294 GLU GLU A . n B 2 295 LEU 295 295 295 LEU LEU A . n B 2 296 ILE 296 296 296 ILE ILE A . n B 2 297 LYS 297 297 297 LYS LYS A . n B 2 298 ILE 298 298 298 ILE ILE A . n B 2 299 LEU 299 299 299 LEU LEU A . n B 2 300 GLU 300 300 300 GLU GLU A . n B 2 301 PRO 301 301 301 PRO PRO A . n B 2 302 ILE 302 302 302 ILE ILE A . n B 2 303 ARG 303 303 303 ARG ARG A . n B 2 304 LYS 304 304 304 LYS LYS A . n B 2 305 ARG 305 305 305 ARG ARG A . n B 2 306 LEU 306 306 306 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 1501 1501 MG MG B . D 3 MG 1 1502 502 MG MG B . E 3 MG 1 1503 504 MG MG B . F 3 MG 1 503 503 MG MG A . G 4 TYR 1 401 401 TYR TYR A . H 5 HOH 1 5 5 HOH HOH B . H 5 HOH 2 18 18 HOH HOH B . H 5 HOH 3 23 23 HOH HOH B . H 5 HOH 4 24 24 HOH HOH B . H 5 HOH 5 25 25 HOH HOH B . H 5 HOH 6 28 28 HOH HOH B . H 5 HOH 7 38 38 HOH HOH B . H 5 HOH 8 41 41 HOH HOH B . H 5 HOH 9 43 43 HOH HOH B . H 5 HOH 10 46 46 HOH HOH B . H 5 HOH 11 56 56 HOH HOH B . H 5 HOH 12 58 58 HOH HOH B . H 5 HOH 13 59 59 HOH HOH B . H 5 HOH 14 60 60 HOH HOH B . H 5 HOH 15 61 61 HOH HOH B . H 5 HOH 16 66 66 HOH HOH B . H 5 HOH 17 71 71 HOH HOH B . H 5 HOH 18 77 77 HOH HOH B . H 5 HOH 19 88 88 HOH HOH B . H 5 HOH 20 92 92 HOH HOH B . H 5 HOH 21 98 98 HOH HOH B . H 5 HOH 22 107 107 HOH HOH B . H 5 HOH 23 112 112 HOH HOH B . H 5 HOH 24 116 116 HOH HOH B . H 5 HOH 25 118 118 HOH HOH B . H 5 HOH 26 120 120 HOH HOH B . H 5 HOH 27 126 126 HOH HOH B . H 5 HOH 28 131 131 HOH HOH B . H 5 HOH 29 132 132 HOH HOH B . H 5 HOH 30 133 133 HOH HOH B . H 5 HOH 31 138 138 HOH HOH B . H 5 HOH 32 141 141 HOH HOH B . H 5 HOH 33 142 142 HOH HOH B . H 5 HOH 34 145 145 HOH HOH B . H 5 HOH 35 148 148 HOH HOH B . H 5 HOH 36 149 149 HOH HOH B . H 5 HOH 37 152 152 HOH HOH B . H 5 HOH 38 155 155 HOH HOH B . H 5 HOH 39 157 157 HOH HOH B . H 5 HOH 40 160 160 HOH HOH B . H 5 HOH 41 162 162 HOH HOH B . H 5 HOH 42 163 163 HOH HOH B . H 5 HOH 43 165 165 HOH HOH B . H 5 HOH 44 168 168 HOH HOH B . H 5 HOH 45 169 169 HOH HOH B . H 5 HOH 46 171 171 HOH HOH B . H 5 HOH 47 173 173 HOH HOH B . H 5 HOH 48 175 175 HOH HOH B . H 5 HOH 49 181 181 HOH HOH B . H 5 HOH 50 182 182 HOH HOH B . H 5 HOH 51 185 185 HOH HOH B . H 5 HOH 52 192 192 HOH HOH B . H 5 HOH 53 195 195 HOH HOH B . H 5 HOH 54 196 196 HOH HOH B . H 5 HOH 55 197 197 HOH HOH B . H 5 HOH 56 198 198 HOH HOH B . H 5 HOH 57 199 199 HOH HOH B . H 5 HOH 58 200 200 HOH HOH B . H 5 HOH 59 203 203 HOH HOH B . H 5 HOH 60 204 204 HOH HOH B . H 5 HOH 61 206 206 HOH HOH B . H 5 HOH 62 207 207 HOH HOH B . H 5 HOH 63 209 209 HOH HOH B . H 5 HOH 64 211 211 HOH HOH B . H 5 HOH 65 215 215 HOH HOH B . H 5 HOH 66 219 219 HOH HOH B . H 5 HOH 67 221 221 HOH HOH B . H 5 HOH 68 224 224 HOH HOH B . H 5 HOH 69 225 225 HOH HOH B . H 5 HOH 70 228 228 HOH HOH B . H 5 HOH 71 230 230 HOH HOH B . H 5 HOH 72 231 231 HOH HOH B . H 5 HOH 73 232 232 HOH HOH B . H 5 HOH 74 235 235 HOH HOH B . H 5 HOH 75 236 236 HOH HOH B . H 5 HOH 76 239 239 HOH HOH B . H 5 HOH 77 243 243 HOH HOH B . H 5 HOH 78 247 247 HOH HOH B . H 5 HOH 79 252 252 HOH HOH B . H 5 HOH 80 260 260 HOH HOH B . H 5 HOH 81 261 261 HOH HOH B . H 5 HOH 82 262 262 HOH HOH B . H 5 HOH 83 264 264 HOH HOH B . H 5 HOH 84 265 265 HOH HOH B . H 5 HOH 85 273 273 HOH HOH B . H 5 HOH 86 278 278 HOH HOH B . H 5 HOH 87 280 280 HOH HOH B . H 5 HOH 88 282 282 HOH HOH B . H 5 HOH 89 287 287 HOH HOH B . H 5 HOH 90 288 288 HOH HOH B . H 5 HOH 91 289 289 HOH HOH B . H 5 HOH 92 290 290 HOH HOH B . H 5 HOH 93 291 291 HOH HOH B . H 5 HOH 94 292 292 HOH HOH B . H 5 HOH 95 306 306 HOH HOH B . H 5 HOH 96 307 307 HOH HOH B . H 5 HOH 97 308 308 HOH HOH B . H 5 HOH 98 309 309 HOH HOH B . H 5 HOH 99 311 311 HOH HOH B . H 5 HOH 100 315 315 HOH HOH B . H 5 HOH 101 316 316 HOH HOH B . H 5 HOH 102 323 323 HOH HOH B . H 5 HOH 103 327 327 HOH HOH B . H 5 HOH 104 328 328 HOH HOH B . H 5 HOH 105 329 329 HOH HOH B . H 5 HOH 106 330 330 HOH HOH B . H 5 HOH 107 331 331 HOH HOH B . H 5 HOH 108 332 332 HOH HOH B . H 5 HOH 109 333 333 HOH HOH B . H 5 HOH 110 350 350 HOH HOH B . H 5 HOH 111 351 351 HOH HOH B . H 5 HOH 112 352 352 HOH HOH B . H 5 HOH 113 353 353 HOH HOH B . H 5 HOH 114 354 354 HOH HOH B . H 5 HOH 115 355 355 HOH HOH B . H 5 HOH 116 357 357 HOH HOH B . H 5 HOH 117 358 358 HOH HOH B . H 5 HOH 118 359 359 HOH HOH B . H 5 HOH 119 360 360 HOH HOH B . H 5 HOH 120 361 361 HOH HOH B . H 5 HOH 121 362 362 HOH HOH B . H 5 HOH 122 363 363 HOH HOH B . I 5 HOH 1 504 1 HOH HOH A . I 5 HOH 2 505 2 HOH HOH A . I 5 HOH 3 506 3 HOH HOH A . I 5 HOH 4 507 4 HOH HOH A . I 5 HOH 5 508 6 HOH HOH A . I 5 HOH 6 509 7 HOH HOH A . I 5 HOH 7 510 8 HOH HOH A . I 5 HOH 8 511 9 HOH HOH A . I 5 HOH 9 512 10 HOH HOH A . I 5 HOH 10 513 11 HOH HOH A . I 5 HOH 11 514 12 HOH HOH A . I 5 HOH 12 515 13 HOH HOH A . I 5 HOH 13 516 14 HOH HOH A . I 5 HOH 14 517 15 HOH HOH A . I 5 HOH 15 518 16 HOH HOH A . I 5 HOH 16 519 17 HOH HOH A . I 5 HOH 17 520 19 HOH HOH A . I 5 HOH 18 521 20 HOH HOH A . I 5 HOH 19 522 21 HOH HOH A . I 5 HOH 20 523 22 HOH HOH A . I 5 HOH 21 524 26 HOH HOH A . I 5 HOH 22 525 27 HOH HOH A . I 5 HOH 23 526 29 HOH HOH A . I 5 HOH 24 527 30 HOH HOH A . I 5 HOH 25 528 31 HOH HOH A . I 5 HOH 26 529 32 HOH HOH A . I 5 HOH 27 530 33 HOH HOH A . I 5 HOH 28 531 34 HOH HOH A . I 5 HOH 29 532 35 HOH HOH A . I 5 HOH 30 533 36 HOH HOH A . I 5 HOH 31 534 37 HOH HOH A . I 5 HOH 32 535 39 HOH HOH A . I 5 HOH 33 536 40 HOH HOH A . I 5 HOH 34 537 42 HOH HOH A . I 5 HOH 35 538 44 HOH HOH A . I 5 HOH 36 539 45 HOH HOH A . I 5 HOH 37 540 47 HOH HOH A . I 5 HOH 38 541 48 HOH HOH A . I 5 HOH 39 542 49 HOH HOH A . I 5 HOH 40 543 50 HOH HOH A . I 5 HOH 41 544 51 HOH HOH A . I 5 HOH 42 545 52 HOH HOH A . I 5 HOH 43 546 53 HOH HOH A . I 5 HOH 44 547 54 HOH HOH A . I 5 HOH 45 548 55 HOH HOH A . I 5 HOH 46 549 57 HOH HOH A . I 5 HOH 47 550 62 HOH HOH A . I 5 HOH 48 551 63 HOH HOH A . I 5 HOH 49 552 64 HOH HOH A . I 5 HOH 50 553 65 HOH HOH A . I 5 HOH 51 554 67 HOH HOH A . I 5 HOH 52 555 68 HOH HOH A . I 5 HOH 53 556 69 HOH HOH A . I 5 HOH 54 557 70 HOH HOH A . I 5 HOH 55 558 72 HOH HOH A . I 5 HOH 56 559 73 HOH HOH A . I 5 HOH 57 560 74 HOH HOH A . I 5 HOH 58 561 75 HOH HOH A . I 5 HOH 59 562 76 HOH HOH A . I 5 HOH 60 563 78 HOH HOH A . I 5 HOH 61 564 79 HOH HOH A . I 5 HOH 62 565 80 HOH HOH A . I 5 HOH 63 566 81 HOH HOH A . I 5 HOH 64 567 82 HOH HOH A . I 5 HOH 65 568 83 HOH HOH A . I 5 HOH 66 569 84 HOH HOH A . I 5 HOH 67 570 85 HOH HOH A . I 5 HOH 68 571 86 HOH HOH A . I 5 HOH 69 572 87 HOH HOH A . I 5 HOH 70 573 89 HOH HOH A . I 5 HOH 71 574 90 HOH HOH A . I 5 HOH 72 575 91 HOH HOH A . I 5 HOH 73 576 93 HOH HOH A . I 5 HOH 74 577 94 HOH HOH A . I 5 HOH 75 578 95 HOH HOH A . I 5 HOH 76 579 96 HOH HOH A . I 5 HOH 77 580 97 HOH HOH A . I 5 HOH 78 581 99 HOH HOH A . I 5 HOH 79 582 100 HOH HOH A . I 5 HOH 80 583 101 HOH HOH A . I 5 HOH 81 584 102 HOH HOH A . I 5 HOH 82 585 103 HOH HOH A . I 5 HOH 83 586 104 HOH HOH A . I 5 HOH 84 587 105 HOH HOH A . I 5 HOH 85 588 106 HOH HOH A . I 5 HOH 86 589 108 HOH HOH A . I 5 HOH 87 590 109 HOH HOH A . I 5 HOH 88 591 110 HOH HOH A . I 5 HOH 89 592 111 HOH HOH A . I 5 HOH 90 593 113 HOH HOH A . I 5 HOH 91 594 114 HOH HOH A . I 5 HOH 92 595 115 HOH HOH A . I 5 HOH 93 596 117 HOH HOH A . I 5 HOH 94 597 119 HOH HOH A . I 5 HOH 95 598 121 HOH HOH A . I 5 HOH 96 599 122 HOH HOH A . I 5 HOH 97 600 123 HOH HOH A . I 5 HOH 98 601 124 HOH HOH A . I 5 HOH 99 602 125 HOH HOH A . I 5 HOH 100 603 127 HOH HOH A . I 5 HOH 101 604 128 HOH HOH A . I 5 HOH 102 605 129 HOH HOH A . I 5 HOH 103 606 130 HOH HOH A . I 5 HOH 104 607 134 HOH HOH A . I 5 HOH 105 608 135 HOH HOH A . I 5 HOH 106 609 136 HOH HOH A . I 5 HOH 107 610 137 HOH HOH A . I 5 HOH 108 611 139 HOH HOH A . I 5 HOH 109 612 140 HOH HOH A . I 5 HOH 110 613 143 HOH HOH A . I 5 HOH 111 614 144 HOH HOH A . I 5 HOH 112 615 146 HOH HOH A . I 5 HOH 113 616 147 HOH HOH A . I 5 HOH 114 617 150 HOH HOH A . I 5 HOH 115 618 151 HOH HOH A . I 5 HOH 116 619 153 HOH HOH A . I 5 HOH 117 620 154 HOH HOH A . I 5 HOH 118 621 156 HOH HOH A . I 5 HOH 119 622 158 HOH HOH A . I 5 HOH 120 623 159 HOH HOH A . I 5 HOH 121 624 161 HOH HOH A . I 5 HOH 122 625 164 HOH HOH A . I 5 HOH 123 626 166 HOH HOH A . I 5 HOH 124 627 167 HOH HOH A . I 5 HOH 125 628 170 HOH HOH A . I 5 HOH 126 629 172 HOH HOH A . I 5 HOH 127 630 174 HOH HOH A . I 5 HOH 128 631 176 HOH HOH A . I 5 HOH 129 632 177 HOH HOH A . I 5 HOH 130 633 178 HOH HOH A . I 5 HOH 131 634 179 HOH HOH A . I 5 HOH 132 635 180 HOH HOH A . I 5 HOH 133 636 183 HOH HOH A . I 5 HOH 134 637 184 HOH HOH A . I 5 HOH 135 638 186 HOH HOH A . I 5 HOH 136 639 187 HOH HOH A . I 5 HOH 137 640 188 HOH HOH A . I 5 HOH 138 641 189 HOH HOH A . I 5 HOH 139 642 190 HOH HOH A . I 5 HOH 140 643 191 HOH HOH A . I 5 HOH 141 644 193 HOH HOH A . I 5 HOH 142 645 194 HOH HOH A . I 5 HOH 143 646 201 HOH HOH A . I 5 HOH 144 647 202 HOH HOH A . I 5 HOH 145 648 205 HOH HOH A . I 5 HOH 146 649 208 HOH HOH A . I 5 HOH 147 650 210 HOH HOH A . I 5 HOH 148 651 212 HOH HOH A . I 5 HOH 149 652 213 HOH HOH A . I 5 HOH 150 653 214 HOH HOH A . I 5 HOH 151 654 216 HOH HOH A . I 5 HOH 152 655 217 HOH HOH A . I 5 HOH 153 656 218 HOH HOH A . I 5 HOH 154 657 220 HOH HOH A . I 5 HOH 155 658 222 HOH HOH A . I 5 HOH 156 659 223 HOH HOH A . I 5 HOH 157 660 226 HOH HOH A . I 5 HOH 158 661 227 HOH HOH A . I 5 HOH 159 662 229 HOH HOH A . I 5 HOH 160 663 233 HOH HOH A . I 5 HOH 161 664 234 HOH HOH A . I 5 HOH 162 665 237 HOH HOH A . I 5 HOH 163 666 238 HOH HOH A . I 5 HOH 164 667 240 HOH HOH A . I 5 HOH 165 668 241 HOH HOH A . I 5 HOH 166 669 242 HOH HOH A . I 5 HOH 167 670 244 HOH HOH A . I 5 HOH 168 671 245 HOH HOH A . I 5 HOH 169 672 246 HOH HOH A . I 5 HOH 170 673 248 HOH HOH A . I 5 HOH 171 674 249 HOH HOH A . I 5 HOH 172 675 250 HOH HOH A . I 5 HOH 173 676 251 HOH HOH A . I 5 HOH 174 677 253 HOH HOH A . I 5 HOH 175 678 254 HOH HOH A . I 5 HOH 176 679 255 HOH HOH A . I 5 HOH 177 680 256 HOH HOH A . I 5 HOH 178 681 257 HOH HOH A . I 5 HOH 179 682 258 HOH HOH A . I 5 HOH 180 683 259 HOH HOH A . I 5 HOH 181 684 263 HOH HOH A . I 5 HOH 182 685 266 HOH HOH A . I 5 HOH 183 686 267 HOH HOH A . I 5 HOH 184 687 268 HOH HOH A . I 5 HOH 185 688 269 HOH HOH A . I 5 HOH 186 689 270 HOH HOH A . I 5 HOH 187 690 271 HOH HOH A . I 5 HOH 188 691 272 HOH HOH A . I 5 HOH 189 692 274 HOH HOH A . I 5 HOH 190 693 275 HOH HOH A . I 5 HOH 191 694 276 HOH HOH A . I 5 HOH 192 695 277 HOH HOH A . I 5 HOH 193 696 279 HOH HOH A . I 5 HOH 194 697 281 HOH HOH A . I 5 HOH 195 698 283 HOH HOH A . I 5 HOH 196 699 284 HOH HOH A . I 5 HOH 197 700 285 HOH HOH A . I 5 HOH 198 701 286 HOH HOH A . I 5 HOH 199 702 293 HOH HOH A . I 5 HOH 200 703 294 HOH HOH A . I 5 HOH 201 704 295 HOH HOH A . I 5 HOH 202 705 296 HOH HOH A . I 5 HOH 203 706 297 HOH HOH A . I 5 HOH 204 707 298 HOH HOH A . I 5 HOH 205 708 299 HOH HOH A . I 5 HOH 206 709 300 HOH HOH A . I 5 HOH 207 710 301 HOH HOH A . I 5 HOH 208 711 302 HOH HOH A . I 5 HOH 209 712 303 HOH HOH A . I 5 HOH 210 713 304 HOH HOH A . I 5 HOH 211 714 305 HOH HOH A . I 5 HOH 212 715 310 HOH HOH A . I 5 HOH 213 716 312 HOH HOH A . I 5 HOH 214 717 313 HOH HOH A . I 5 HOH 215 718 314 HOH HOH A . I 5 HOH 216 719 317 HOH HOH A . I 5 HOH 217 720 318 HOH HOH A . I 5 HOH 218 721 319 HOH HOH A . I 5 HOH 219 722 320 HOH HOH A . I 5 HOH 220 723 321 HOH HOH A . I 5 HOH 221 724 322 HOH HOH A . I 5 HOH 222 725 324 HOH HOH A . I 5 HOH 223 726 325 HOH HOH A . I 5 HOH 224 727 326 HOH HOH A . I 5 HOH 225 728 334 HOH HOH A . I 5 HOH 226 729 335 HOH HOH A . I 5 HOH 227 730 336 HOH HOH A . I 5 HOH 228 731 337 HOH HOH A . I 5 HOH 229 732 338 HOH HOH A . I 5 HOH 230 733 339 HOH HOH A . I 5 HOH 231 734 340 HOH HOH A . I 5 HOH 232 735 341 HOH HOH A . I 5 HOH 233 736 342 HOH HOH A . I 5 HOH 234 737 343 HOH HOH A . I 5 HOH 235 738 344 HOH HOH A . I 5 HOH 236 739 345 HOH HOH A . I 5 HOH 237 740 346 HOH HOH A . I 5 HOH 238 741 347 HOH HOH A . I 5 HOH 239 742 348 HOH HOH A . I 5 HOH 240 743 349 HOH HOH A . I 5 HOH 241 744 356 HOH HOH A . I 5 HOH 242 745 364 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MLPHARE phasing . ? 4 # _cell.entry_id 1J1U _cell.length_a 86.805 _cell.length_b 86.805 _cell.length_c 156.075 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J1U _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 1J1U _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.11 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details ;1,6-hexanediol, ammonium chloride, magnesium chloride, zinc acetate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 303K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 1,6-hexanediol ? ? ? 1 2 1 'ammonium chloride' ? ? ? 1 3 1 'magnesium chloride' ? ? ? 1 4 1 'zinc acetate' ? ? ? 1 5 1 'sodium acetate' ? ? ? 1 6 2 'ammonium chloride' ? ? ? 1 7 2 'magnesium chloride' ? ? ? 1 8 2 'zinc acetate' ? ? ? 1 9 2 'sodium acetate' ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2002-05-23 mirrors 2 CCD MARRESEARCH 2002-06-13 mirrors # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si 111 CHANNEL' 'SINGLE WAVELENGTH' x-ray 2 1 M 'Si 111 CHANNEL' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9132 1.0 2 0.9793 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SPRING-8 BEAMLINE BL41XU' SPring-8 BL41XU ? 0.9132 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL41XU' SPring-8 BL41XU ? 0.9793 # _reflns.entry_id 1J1U _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.95 _reflns.number_obs 49557 _reflns.number_all 50210 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_sigmaI 30.9 _reflns.B_iso_Wilson_estimate 23.1 _reflns.pdbx_redundancy 8.5 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 93.1 _reflns_shell.Rmerge_I_obs 0.282 _reflns_shell.pdbx_Rsym_value 0.282 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2302 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1J1U _refine.ls_number_reflns_obs 49545 _refine.ls_number_reflns_all 50210 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 1657649.24 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 34.63 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 98.6 _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error 0.003 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 4982 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 43.6 _refine.aniso_B[1][1] 3.86 _refine.aniso_B[2][2] 3.86 _refine.aniso_B[3][3] -7.72 _refine.aniso_B[1][2] 3.02 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.356068 _refine.solvent_model_param_bsol 62.7078 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'The bond distance between SD and CE in MET A 134 is slightly long.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1J1U _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.22 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.25 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2414 _refine_hist.pdbx_number_atoms_nucleic_acid 1578 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 364 _refine_hist.number_atoms_total 4373 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 34.63 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.95 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 4.48 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 5.07 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 6.27 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 8.22 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 2.07 _refine_ls_shell.number_reflns_R_work 7049 _refine_ls_shell.R_factor_R_work 0.258 _refine_ls_shell.percent_reflns_obs 94.7 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.R_factor_R_free_error 0.011 _refine_ls_shell.percent_reflns_R_free 10.3 _refine_ls_shell.number_reflns_R_free 807 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 CIS_PEPTIDE.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1J1U _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1J1U _struct.title 'Crystal structure of archaeal tyrosyl-tRNA synthetase complexed with tRNA(Tyr) and L-tyrosine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1J1U _struct_keywords.pdbx_keywords ligase/RNA _struct_keywords.text ;Aminoacyl-tRNA synthetase, ligase, tRNA, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, ligase-RNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SYY_METJA 2 ;MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL ; 1 Q57834 ? 2 PDB 1J1U 1 ? ? 1J1U ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1J1U A 1 ? 306 ? Q57834 1 ? 306 ? 1 306 2 2 1J1U B 1 ? 77 ? 1J1U 501 ? 577 ? 501 577 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 156.0750000000 # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly is generated by the two fold axis: y,x,-z+1 ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP B 2 ? ARG B 9 ? ASP A 2 ARG A 9 1 ? 8 HELX_P HELX_P2 2 SER B 16 ? LYS B 25 ? SER A 16 LYS A 25 1 ? 10 HELX_P HELX_P3 3 HIS B 42 ? ALA B 58 ? HIS A 42 ALA A 58 1 ? 17 HELX_P HELX_P4 4 ALA B 67 ? ASN B 74 ? ALA A 67 ASN A 74 1 ? 8 HELX_P HELX_P5 5 GLU B 78 ? MET B 96 ? GLU A 78 MET A 96 1 ? 19 HELX_P HELX_P6 6 SER B 106 ? PHE B 108 ? SER A 106 PHE A 108 5 ? 3 HELX_P HELX_P7 7 ASP B 111 ? THR B 125 ? ASP A 111 THR A 125 1 ? 15 HELX_P HELX_P8 8 THR B 126 ? MET B 134 ? THR A 126 MET A 134 1 ? 9 HELX_P HELX_P9 9 VAL B 146 ? GLY B 163 ? VAL A 146 GLY A 163 1 ? 18 HELX_P HELX_P10 10 GLN B 173 ? LEU B 184 ? GLN A 173 LEU A 184 1 ? 12 HELX_P HELX_P11 11 SER B 218 ? ALA B 229 ? SER A 218 ALA A 229 1 ? 12 HELX_P HELX_P12 12 ASN B 239 ? PHE B 248 ? ASN A 239 PHE A 248 1 ? 10 HELX_P HELX_P13 13 PRO B 258 ? GLY B 262 ? PRO A 258 GLY A 262 5 ? 5 HELX_P HELX_P14 14 SER B 269 ? ASN B 279 ? SER A 269 ASN A 279 1 ? 11 HELX_P HELX_P15 15 HIS B 283 ? ARG B 305 ? HIS A 283 ARG A 305 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 18 B MG 1503 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc2 metalc ? ? H HOH . O ? ? ? 1_555 C MG . MG ? ? B HOH 60 B MG 1501 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc3 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 61 B MG 1502 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc4 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 77 B MG 1503 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc5 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 278 B MG 1503 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc6 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 288 B MG 1502 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc7 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 289 B MG 1502 1_555 ? ? ? ? ? ? ? 2.151 ? ? metalc8 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 290 B MG 1502 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc9 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 291 B MG 1502 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc10 metalc ? ? H HOH . O ? ? ? 1_555 D MG . MG ? ? B HOH 292 B MG 1502 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc11 metalc ? ? H HOH . O ? ? ? 1_555 C MG . MG ? ? B HOH 350 B MG 1501 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc12 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 359 B MG 1503 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc13 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 360 B MG 1503 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc14 metalc ? ? H HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 361 B MG 1503 1_555 ? ? ? ? ? ? ? 2.593 ? ? metalc15 metalc ? ? A A 9 OP1 ? ? ? 1_555 C MG . MG ? ? B A 509 B MG 1501 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc16 metalc ? ? A G 10 OP2 ? ? ? 1_555 C MG . MG ? ? B G 510 B MG 1501 1_555 ? ? ? ? ? ? ? 2.240 ? ? metalc17 metalc ? ? A U 48 OP1 ? ? ? 1_555 C MG . MG ? ? B U 548 B MG 1501 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc18 metalc ? ? B HIS 160 NE2 ? ? ? 1_555 F MG . MG ? ? A HIS 160 A MG 503 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc19 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 503 A HOH 722 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 503 A HOH 723 1_555 ? ? ? ? ? ? ? 2.091 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 73 N1 ? ? B C 501 B G 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 73 O6 ? ? B C 501 B G 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 73 N2 ? ? B C 501 B G 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 72 N1 ? ? B C 502 B G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 72 O6 ? ? B C 502 B G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 72 N2 ? ? B C 502 B G 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 71 N3 ? ? B G 503 B C 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 71 O2 ? ? B G 503 B C 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 71 N4 ? ? B G 503 B C 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 70 N3 ? ? B G 504 B C 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 70 O2 ? ? B G 504 B C 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 70 N4 ? ? B G 504 B C 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 69 N1 ? ? B C 505 B G 569 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 69 O6 ? ? B C 505 B G 569 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 69 N2 ? ? B C 505 B G 569 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 68 N3 ? ? B G 506 B C 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 68 O2 ? ? B G 506 B C 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 68 N4 ? ? B G 506 B C 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 67 N3 ? ? B G 507 B C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 67 O2 ? ? B G 507 B C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 67 N4 ? ? B G 507 B C 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? B U 508 B A 514 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog23 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 14 N6 ? ? B U 508 B A 514 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog24 hydrog ? ? A A 9 N6 ? ? ? 1_555 A A 24 N7 ? ? B A 509 B A 524 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog25 hydrog ? ? A A 9 N7 ? ? ? 1_555 A A 24 N6 ? ? B A 509 B A 524 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog26 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 26 N3 ? ? B G 510 B C 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 26 O2 ? ? B G 510 B C 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 26 N4 ? ? B G 510 B C 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 10 O6 ? ? ? 1_555 A U 46 N3 ? ? B G 510 B U 546 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog30 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 25 N1 ? ? B U 511 B A 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 25 N6 ? ? B U 511 B A 525 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 24 N1 ? ? B U 512 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 24 N6 ? ? B U 512 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 23 N1 ? ? B C 513 B G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 23 O6 ? ? B C 513 B G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 23 N2 ? ? B C 513 B G 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 22 N3 ? ? B A 514 B A 522 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog38 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 49 O2 ? ? B G 515 B C 549 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog39 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 49 N3 ? ? B G 515 B C 549 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog40 hydrog ? ? A G 19 N1 ? ? ? 1_555 A U 56 O2 ? ? B G 519 B U 556 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog41 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 57 N3 ? ? B G 520 B C 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 57 O2 ? ? B G 520 B C 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 57 N4 ? ? B G 520 B C 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 23 N7 ? ? ? 1_555 A G 47 N1 ? ? B G 523 B G 547 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog45 hydrog ? ? A G 23 O6 ? ? ? 1_555 A G 47 N2 ? ? B G 523 B G 547 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog46 hydrog ? ? A C 26 N4 ? ? ? 1_555 A U 46 O4 ? ? B C 526 B U 546 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog47 hydrog ? ? A G 27 N1 ? ? ? 1_555 A A 45 N1 ? ? B G 527 B A 545 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog48 hydrog ? ? A G 27 O6 ? ? ? 1_555 A A 45 N6 ? ? B G 527 B A 545 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog49 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 44 N3 ? ? B G 528 B C 544 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 44 O2 ? ? B G 528 B C 544 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 44 N4 ? ? B G 528 B C 544 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 43 N1 ? ? B C 529 B G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 43 O6 ? ? B C 529 B G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 43 N2 ? ? B C 529 B G 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 42 N3 ? ? B G 530 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 42 O2 ? ? B G 530 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 42 N4 ? ? B G 530 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 41 N3 ? ? B G 531 B C 541 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog59 hydrog ? ? A A 32 N1 ? ? ? 1_555 A U 40 N3 ? ? B A 532 B U 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A A 32 N6 ? ? ? 1_555 A U 40 O4 ? ? B A 532 B U 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 33 O2 ? ? ? 1_555 A A 39 N6 ? ? B C 533 B A 539 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog62 hydrog ? ? A U 34 N3 ? ? ? 1_555 A A 37 N7 ? ? B U 534 B A 537 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog63 hydrog ? ? A G 50 N1 ? ? ? 1_555 A C 66 N3 ? ? B G 550 B C 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 50 N2 ? ? ? 1_555 A C 66 O2 ? ? B G 550 B C 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 50 O6 ? ? ? 1_555 A C 66 N4 ? ? B G 550 B C 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 51 N3 ? ? ? 1_555 A G 65 N1 ? ? B C 551 B G 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 51 N4 ? ? ? 1_555 A G 65 O6 ? ? B C 551 B G 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 51 O2 ? ? ? 1_555 A G 65 N2 ? ? B C 551 B G 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A U 52 N3 ? ? ? 1_555 A G 64 O6 ? ? B U 552 B G 564 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog70 hydrog ? ? A U 52 O2 ? ? ? 1_555 A G 64 N1 ? ? B U 552 B G 564 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog71 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 63 N3 ? ? B G 553 B C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 63 O2 ? ? B G 553 B C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 63 N4 ? ? B G 553 B C 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 54 N1 ? ? ? 1_555 A C 62 N3 ? ? B G 554 B C 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 54 N2 ? ? ? 1_555 A C 62 O2 ? ? B G 554 B C 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 54 O6 ? ? ? 1_555 A C 62 N4 ? ? B G 554 B C 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A U 55 N3 ? ? ? 1_555 A A 59 N7 ? ? B U 555 B A 559 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog78 hydrog ? ? A U 55 O2 ? ? ? 1_555 A A 59 N6 ? ? B U 555 B A 559 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? B HOH 18 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 77 ? 1_555 167.8 ? 2 O ? H HOH . ? B HOH 18 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 278 ? 1_555 90.2 ? 3 O ? H HOH . ? B HOH 77 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 278 ? 1_555 86.3 ? 4 O ? H HOH . ? B HOH 18 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 359 ? 1_555 88.4 ? 5 O ? H HOH . ? B HOH 77 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 359 ? 1_555 103.9 ? 6 O ? H HOH . ? B HOH 278 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 359 ? 1_555 106.5 ? 7 O ? H HOH . ? B HOH 18 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 360 ? 1_555 83.5 ? 8 O ? H HOH . ? B HOH 77 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 360 ? 1_555 84.6 ? 9 O ? H HOH . ? B HOH 278 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 360 ? 1_555 87.6 ? 10 O ? H HOH . ? B HOH 359 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 360 ? 1_555 163.8 ? 11 O ? H HOH . ? B HOH 18 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 361 ? 1_555 78.4 ? 12 O ? H HOH . ? B HOH 77 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 361 ? 1_555 103.7 ? 13 O ? H HOH . ? B HOH 278 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 361 ? 1_555 167.5 ? 14 O ? H HOH . ? B HOH 359 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 361 ? 1_555 78.6 ? 15 O ? H HOH . ? B HOH 360 ? 1_555 MG ? E MG . ? B MG 1503 ? 1_555 O ? H HOH . ? B HOH 361 ? 1_555 86.0 ? 16 O ? H HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 O ? H HOH . ? B HOH 350 ? 1_555 94.2 ? 17 O ? H HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A A 9 ? B A 509 ? 1_555 81.5 ? 18 O ? H HOH . ? B HOH 350 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A A 9 ? B A 509 ? 1_555 105.1 ? 19 O ? H HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP2 ? A G 10 ? B G 510 ? 1_555 72.2 ? 20 O ? H HOH . ? B HOH 350 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP2 ? A G 10 ? B G 510 ? 1_555 153.8 ? 21 OP1 ? A A 9 ? B A 509 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP2 ? A G 10 ? B G 510 ? 1_555 95.1 ? 22 O ? H HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A U 48 ? B U 548 ? 1_555 159.9 ? 23 O ? H HOH . ? B HOH 350 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A U 48 ? B U 548 ? 1_555 89.7 ? 24 OP1 ? A A 9 ? B A 509 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A U 48 ? B U 548 ? 1_555 116.5 ? 25 OP2 ? A G 10 ? B G 510 ? 1_555 MG ? C MG . ? B MG 1501 ? 1_555 OP1 ? A U 48 ? B U 548 ? 1_555 96.0 ? 26 O ? H HOH . ? B HOH 61 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 288 ? 1_555 86.9 ? 27 O ? H HOH . ? B HOH 61 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 289 ? 1_555 82.7 ? 28 O ? H HOH . ? B HOH 288 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 289 ? 1_555 169.3 ? 29 O ? H HOH . ? B HOH 61 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 290 ? 1_555 89.7 ? 30 O ? H HOH . ? B HOH 288 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 290 ? 1_555 83.4 ? 31 O ? H HOH . ? B HOH 289 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 290 ? 1_555 94.7 ? 32 O ? H HOH . ? B HOH 61 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 291 ? 1_555 92.3 ? 33 O ? H HOH . ? B HOH 288 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 291 ? 1_555 87.7 ? 34 O ? H HOH . ? B HOH 289 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 291 ? 1_555 94.5 ? 35 O ? H HOH . ? B HOH 290 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 291 ? 1_555 170.8 ? 36 O ? H HOH . ? B HOH 61 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 292 ? 1_555 166.4 ? 37 O ? H HOH . ? B HOH 288 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 292 ? 1_555 85.0 ? 38 O ? H HOH . ? B HOH 289 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 292 ? 1_555 104.9 ? 39 O ? H HOH . ? B HOH 290 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 292 ? 1_555 78.5 ? 40 O ? H HOH . ? B HOH 291 ? 1_555 MG ? D MG . ? B MG 1502 ? 1_555 O ? H HOH . ? B HOH 292 ? 1_555 98.3 ? 41 NE2 ? B HIS 160 ? A HIS 160 ? 1_555 MG ? F MG . ? A MG 503 ? 1_555 O ? I HOH . ? A HOH 722 ? 1_555 112.0 ? 42 NE2 ? B HIS 160 ? A HIS 160 ? 1_555 MG ? F MG . ? A MG 503 ? 1_555 O ? I HOH . ? A HOH 723 ? 1_555 108.4 ? 43 O ? I HOH . ? A HOH 722 ? 1_555 MG ? F MG . ? A MG 503 ? 1_555 O ? I HOH . ? A HOH 723 ? 1_555 123.5 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 15 B . ? ILE 15 A SER 16 B ? SER 16 A 1 -0.20 2 TYR 251 B . ? TYR 251 A PRO 252 B ? PRO 252 A 1 -0.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU B 13 ? ILE B 15 ? GLU A 13 ILE A 15 A 2 VAL B 189 ? ASN B 193 ? VAL A 189 ASN A 193 A 3 VAL B 166 ? GLY B 170 ? VAL A 166 GLY A 170 A 4 LYS B 29 ? PHE B 35 ? LYS A 29 PHE A 35 A 5 PHE B 60 ? LEU B 66 ? PHE A 60 LEU A 66 A 6 LYS B 101 ? TYR B 104 ? LYS A 101 TYR A 104 B 1 LEU B 253 ? ILE B 255 ? LEU A 253 ILE A 255 B 2 LEU B 265 ? VAL B 267 ? LEU A 265 VAL A 267 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE B 15 ? N ILE A 15 O CYS B 190 ? O CYS A 190 A 2 3 O VAL B 189 ? O VAL A 189 N ALA B 167 ? N ALA A 167 A 3 4 O VAL B 168 ? O VAL A 168 N TYR B 32 ? N TYR A 32 A 4 5 N ILE B 33 ? N ILE A 33 O LEU B 65 ? O LEU A 65 A 5 6 N LEU B 66 ? N LEU A 66 O VAL B 103 ? O VAL A 103 B 1 2 N ILE B 255 ? N ILE A 255 O LEU B 265 ? O LEU A 265 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MG 1501 ? 5 'BINDING SITE FOR RESIDUE MG B 1501' AC2 Software B MG 1502 ? 6 'BINDING SITE FOR RESIDUE MG B 1502' AC3 Software A MG 503 ? 3 'BINDING SITE FOR RESIDUE MG A 503' AC4 Software B MG 1503 ? 6 'BINDING SITE FOR RESIDUE MG B 1503' AC5 Software A TYR 401 ? 12 'BINDING SITE FOR RESIDUE TYR A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HOH H . ? HOH B 60 . ? 1_555 ? 2 AC1 5 HOH H . ? HOH B 350 . ? 1_555 ? 3 AC1 5 A A 9 ? A B 509 . ? 1_555 ? 4 AC1 5 G A 10 ? G B 510 . ? 1_555 ? 5 AC1 5 U A 48 ? U B 548 . ? 1_555 ? 6 AC2 6 HOH H . ? HOH B 61 . ? 1_555 ? 7 AC2 6 HOH H . ? HOH B 288 . ? 1_555 ? 8 AC2 6 HOH H . ? HOH B 289 . ? 1_555 ? 9 AC2 6 HOH H . ? HOH B 290 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH B 291 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH B 292 . ? 1_555 ? 12 AC3 3 HIS B 160 ? HIS A 160 . ? 1_555 ? 13 AC3 3 HOH I . ? HOH A 722 . ? 1_555 ? 14 AC3 3 HOH I . ? HOH A 723 . ? 1_555 ? 15 AC4 6 HOH H . ? HOH B 18 . ? 1_555 ? 16 AC4 6 HOH H . ? HOH B 77 . ? 1_555 ? 17 AC4 6 HOH H . ? HOH B 278 . ? 1_555 ? 18 AC4 6 HOH H . ? HOH B 359 . ? 1_555 ? 19 AC4 6 HOH H . ? HOH B 360 . ? 1_555 ? 20 AC4 6 HOH H . ? HOH B 361 . ? 1_555 ? 21 AC5 12 TYR B 32 ? TYR A 32 . ? 1_555 ? 22 AC5 12 GLY B 34 ? GLY A 34 . ? 1_555 ? 23 AC5 12 GLU B 36 ? GLU A 36 . ? 1_555 ? 24 AC5 12 LEU B 65 ? LEU A 65 . ? 1_555 ? 25 AC5 12 ALA B 67 ? ALA A 67 . ? 1_555 ? 26 AC5 12 HIS B 70 ? HIS A 70 . ? 1_555 ? 27 AC5 12 TYR B 151 ? TYR A 151 . ? 1_555 ? 28 AC5 12 GLN B 155 ? GLN A 155 . ? 1_555 ? 29 AC5 12 ASP B 158 ? ASP A 158 . ? 1_555 ? 30 AC5 12 GLN B 173 ? GLN A 173 . ? 1_555 ? 31 AC5 12 HOH I . ? HOH A 599 . ? 1_555 ? 32 AC5 12 HOH I . ? HOH A 705 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 129 ? ? O A HOH 716 ? ? 1.87 2 1 O A HOH 504 ? ? O A HOH 706 ? ? 1.91 3 1 O A HOH 704 ? ? O A HOH 738 ? ? 1.91 4 1 O A HOH 528 ? ? O A HOH 732 ? ? 1.97 5 1 O A HOH 724 ? ? O A HOH 728 ? ? 1.99 6 1 O A HOH 724 ? ? O A HOH 729 ? ? 2.00 7 1 O A HOH 507 ? ? O A HOH 706 ? ? 2.00 8 1 O A HOH 519 ? ? O A HOH 713 ? ? 2.00 9 1 O A HOH 542 ? ? O A HOH 721 ? ? 2.06 10 1 "O3'" B A 574 ? ? O B HOH 282 ? ? 2.13 11 1 O A HOH 553 ? ? O A HOH 704 ? ? 2.17 12 1 O A HOH 740 ? ? O A HOH 742 ? ? 2.18 13 1 OP1 B G 564 ? ? O B HOH 38 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O5'" B G 553 ? ? "C5'" B G 553 ? ? 1.333 1.420 -0.087 0.009 N 2 1 N1 B C 562 ? ? C2 B C 562 ? ? 1.325 1.397 -0.072 0.010 N 3 1 CE2 A TYR 72 ? ? CD2 A TYR 72 ? ? 1.500 1.389 0.111 0.015 N 4 1 CG A GLU 135 ? ? CD A GLU 135 ? ? 1.636 1.515 0.121 0.015 N 5 1 CD A LYS 145 ? ? CE A LYS 145 ? ? 1.663 1.508 0.155 0.025 N 6 1 CB A VAL 166 ? ? CG2 A VAL 166 ? ? 1.673 1.524 0.149 0.021 N 7 1 CG A GLU 237 ? ? CD A GLU 237 ? ? 1.609 1.515 0.094 0.015 N 8 1 CG A GLU 293 ? ? CD A GLU 293 ? ? 1.612 1.515 0.097 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" B G 519 ? ? "C3'" B G 519 ? ? "O3'" B G 519 ? ? 96.67 109.40 -12.73 2.10 N 2 1 N1 B U 534 ? ? "C1'" B U 534 ? ? "C2'" B U 534 ? ? 123.81 114.00 9.81 1.30 N 3 1 N9 B G 547 ? ? "C1'" B G 547 ? ? "C2'" B G 547 ? ? 122.41 114.00 8.41 1.30 N 4 1 "O3'" B G 547 ? ? P B U 548 ? ? OP1 B U 548 ? ? 117.43 110.50 6.93 1.10 Y 5 1 "O3'" B C 549 ? ? P B G 550 ? ? OP1 B G 550 ? ? 118.17 110.50 7.67 1.10 Y 6 1 "C5'" B G 553 ? ? "C4'" B G 553 ? ? "C3'" B G 553 ? ? 103.43 115.20 -11.77 1.40 N 7 1 "O3'" B C 571 ? ? P B G 572 ? ? OP2 B G 572 ? ? 119.67 110.50 9.17 1.10 Y 8 1 NE A ARG 181 ? ? CZ A ARG 181 ? ? NH1 A ARG 181 ? ? 123.37 120.30 3.07 0.50 N 9 1 CB A VAL 188 ? ? CA A VAL 188 ? ? C A VAL 188 ? ? 96.66 111.40 -14.74 1.90 N 10 1 CG1 A VAL 188 ? ? CB A VAL 188 ? ? CG2 A VAL 188 ? ? 120.66 110.90 9.76 1.60 N 11 1 NE A ARG 257 ? ? CZ A ARG 257 ? ? NH2 A ARG 257 ? ? 116.49 120.30 -3.81 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 2 ? ? 94.53 112.88 2 1 HIS A 42 ? ? -115.72 -168.81 3 1 ASN A 211 ? ? -65.21 13.08 4 1 CYS A 231 ? ? -163.50 79.61 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 C B 501 ? ? 0.072 'SIDE CHAIN' 2 1 G B 504 ? ? 0.062 'SIDE CHAIN' 3 1 U B 518 ? ? 0.097 'SIDE CHAIN' 4 1 G B 520 ? ? 0.071 'SIDE CHAIN' 5 1 U B 534 ? ? 0.212 'SIDE CHAIN' 6 1 A B 539 ? ? 0.054 'SIDE CHAIN' 7 1 C B 542 ? ? 0.066 'SIDE CHAIN' 8 1 U B 546 ? ? 0.119 'SIDE CHAIN' 9 1 ARG A 129 ? ? 0.117 'SIDE CHAIN' # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 730 ? I HOH . 2 1 A HOH 745 ? I HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B C 575 ? A C 75 2 1 Y 1 B C 576 ? A C 76 3 1 Y 1 B A 577 ? A A 77 4 1 Y 1 A GLY 203 ? B GLY 203 5 1 Y 1 A LYS 204 ? B LYS 204 6 1 Y 1 A MET 205 ? B MET 205 7 1 Y 1 A SER 206 ? B SER 206 8 1 Y 1 A SER 207 ? B SER 207 9 1 Y 1 A SER 208 ? B SER 208 10 1 Y 1 A LYS 209 ? B LYS 209 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 MG MG MG N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TYR N N N N 432 TYR CA C N S 433 TYR C C N N 434 TYR O O N N 435 TYR CB C N N 436 TYR CG C Y N 437 TYR CD1 C Y N 438 TYR CD2 C Y N 439 TYR CE1 C Y N 440 TYR CE2 C Y N 441 TYR CZ C Y N 442 TYR OH O N N 443 TYR OXT O N N 444 TYR H H N N 445 TYR H2 H N N 446 TYR HA H N N 447 TYR HB2 H N N 448 TYR HB3 H N N 449 TYR HD1 H N N 450 TYR HD2 H N N 451 TYR HE1 H N N 452 TYR HE2 H N N 453 TYR HH H N N 454 TYR HXT H N N 455 U OP3 O N N 456 U P P N N 457 U OP1 O N N 458 U OP2 O N N 459 U "O5'" O N N 460 U "C5'" C N N 461 U "C4'" C N R 462 U "O4'" O N N 463 U "C3'" C N S 464 U "O3'" O N N 465 U "C2'" C N R 466 U "O2'" O N N 467 U "C1'" C N R 468 U N1 N N N 469 U C2 C N N 470 U O2 O N N 471 U N3 N N N 472 U C4 C N N 473 U O4 O N N 474 U C5 C N N 475 U C6 C N N 476 U HOP3 H N N 477 U HOP2 H N N 478 U "H5'" H N N 479 U "H5''" H N N 480 U "H4'" H N N 481 U "H3'" H N N 482 U "HO3'" H N N 483 U "H2'" H N N 484 U "HO2'" H N N 485 U "H1'" H N N 486 U H3 H N N 487 U H5 H N N 488 U H6 H N N 489 VAL N N N N 490 VAL CA C N S 491 VAL C C N N 492 VAL O O N N 493 VAL CB C N N 494 VAL CG1 C N N 495 VAL CG2 C N N 496 VAL OXT O N N 497 VAL H H N N 498 VAL H2 H N N 499 VAL HA H N N 500 VAL HB H N N 501 VAL HG11 H N N 502 VAL HG12 H N N 503 VAL HG13 H N N 504 VAL HG21 H N N 505 VAL HG22 H N N 506 VAL HG23 H N N 507 VAL HXT H N N 508 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 U OP3 P sing N N 445 U OP3 HOP3 sing N N 446 U P OP1 doub N N 447 U P OP2 sing N N 448 U P "O5'" sing N N 449 U OP2 HOP2 sing N N 450 U "O5'" "C5'" sing N N 451 U "C5'" "C4'" sing N N 452 U "C5'" "H5'" sing N N 453 U "C5'" "H5''" sing N N 454 U "C4'" "O4'" sing N N 455 U "C4'" "C3'" sing N N 456 U "C4'" "H4'" sing N N 457 U "O4'" "C1'" sing N N 458 U "C3'" "O3'" sing N N 459 U "C3'" "C2'" sing N N 460 U "C3'" "H3'" sing N N 461 U "O3'" "HO3'" sing N N 462 U "C2'" "O2'" sing N N 463 U "C2'" "C1'" sing N N 464 U "C2'" "H2'" sing N N 465 U "O2'" "HO2'" sing N N 466 U "C1'" N1 sing N N 467 U "C1'" "H1'" sing N N 468 U N1 C2 sing N N 469 U N1 C6 sing N N 470 U C2 O2 doub N N 471 U C2 N3 sing N N 472 U N3 C4 sing N N 473 U N3 H3 sing N N 474 U C4 O4 doub N N 475 U C4 C5 sing N N 476 U C5 C6 doub N N 477 U C5 H5 sing N N 478 U C6 H6 sing N N 479 VAL N CA sing N N 480 VAL N H sing N N 481 VAL N H2 sing N N 482 VAL CA C sing N N 483 VAL CA CB sing N N 484 VAL CA HA sing N N 485 VAL C O doub N N 486 VAL C OXT sing N N 487 VAL CB CG1 sing N N 488 VAL CB CG2 sing N N 489 VAL CB HB sing N N 490 VAL CG1 HG11 sing N N 491 VAL CG1 HG12 sing N N 492 VAL CG1 HG13 sing N N 493 VAL CG2 HG21 sing N N 494 VAL CG2 HG22 sing N N 495 VAL CG2 HG23 sing N N 496 VAL OXT HXT sing N N 497 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1J1U 'double helix' 1J1U 'a-form double helix' 1J1U 'parallel strands' 1J1U 'mismatched base pair' 1J1U 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 73 1_555 0.452 -0.189 0.155 12.958 -23.526 3.641 1 B_C501:G573_B B 501 ? B 573 ? 19 1 1 A C 2 1_555 A G 72 1_555 0.264 -0.222 0.282 2.909 -15.826 1.183 2 B_C502:G572_B B 502 ? B 572 ? 19 1 1 A G 3 1_555 A C 71 1_555 -0.009 -0.151 0.295 0.879 -13.490 0.059 3 B_G503:C571_B B 503 ? B 571 ? 19 1 1 A G 4 1_555 A C 70 1_555 -0.202 -0.185 0.169 2.241 -13.896 -0.333 4 B_G504:C570_B B 504 ? B 570 ? 19 1 1 A C 5 1_555 A G 69 1_555 0.204 -0.135 0.118 2.815 -13.222 3.421 5 B_C505:G569_B B 505 ? B 569 ? 19 1 1 A G 6 1_555 A C 68 1_555 -0.262 -0.117 0.100 -6.577 -16.980 1.838 6 B_G506:C568_B B 506 ? B 568 ? 19 1 1 A G 7 1_555 A C 67 1_555 -0.135 -0.189 -0.244 -9.284 -7.111 -2.148 7 B_G507:C567_B B 507 ? B 567 ? 19 1 1 A G 50 1_555 A C 66 1_555 -0.166 -0.082 -0.011 -4.634 -11.343 -0.379 8 B_G550:C566_B B 550 ? B 566 ? 19 1 1 A C 51 1_555 A G 65 1_555 0.243 -0.246 -0.046 0.546 -15.416 0.734 9 B_C551:G565_B B 551 ? B 565 ? 19 1 1 A U 52 1_555 A G 64 1_555 2.333 -0.602 0.126 -4.836 -9.719 0.846 10 B_U552:G564_B B 552 ? B 564 ? 28 1 1 A G 53 1_555 A C 63 1_555 -0.343 -0.207 -0.345 -6.233 -11.750 1.904 11 B_G553:C563_B B 553 ? B 563 ? 19 1 1 A G 54 1_555 A C 62 1_555 -0.363 -0.100 -0.117 -8.651 -12.311 -1.981 12 B_G554:C562_B B 554 ? B 562 ? 19 1 1 A U 55 1_555 A A 59 1_555 4.035 -1.931 0.264 -4.743 8.563 -100.925 13 B_U555:A559_B B 555 ? B 559 ? 24 4 1 A U 56 1_555 A G 19 1_555 0.666 -5.462 0.320 17.344 17.140 -94.099 14 B_U556:G519_B B 556 ? B 519 ? ? 2 1 A A 37 1_555 A U 34 1_555 -4.136 0.500 -0.811 -24.416 12.718 -136.594 15 B_A537:U534_B B 537 ? B 534 ? ? ? 1 A A 39 1_555 A C 33 1_555 -4.090 -0.722 0.904 16.503 -8.783 -12.739 16 B_A539:C533_B B 539 ? B 533 ? ? 1 1 A U 40 1_555 A A 32 1_555 -0.692 -0.205 0.013 13.447 -22.170 9.538 17 B_U540:A532_B B 540 ? B 532 ? 20 1 1 A C 41 1_555 A G 31 1_555 -0.794 -0.145 0.082 5.504 -16.020 -19.276 18 B_C541:G531_B B 541 ? B 531 ? ? 1 1 A C 42 1_555 A G 30 1_555 1.149 -0.666 0.215 -0.324 -15.449 -1.406 19 B_C542:G530_B B 542 ? B 530 ? 19 1 1 A G 43 1_555 A C 29 1_555 0.472 0.012 0.397 -5.499 -16.876 3.231 20 B_G543:C529_B B 543 ? B 529 ? 19 1 1 A C 44 1_555 A G 28 1_555 0.058 -0.341 0.460 -8.755 -10.969 -5.683 21 B_C544:G528_B B 544 ? B 528 ? 19 1 1 A A 45 1_555 A G 27 1_555 0.211 1.230 0.254 -13.488 -16.601 -26.335 22 B_A545:G527_B B 545 ? B 527 ? 8 ? 1 A G 10 1_555 A C 26 1_555 -0.527 -0.159 0.020 -5.174 -8.825 0.346 23 B_G510:C526_B B 510 ? B 526 ? 19 1 1 A U 11 1_555 A A 25 1_555 -0.024 -0.342 0.338 -12.144 -19.119 1.698 24 B_U511:A525_B B 511 ? B 525 ? 20 1 1 A U 12 1_555 A A 24 1_555 -0.161 -0.303 -0.327 -5.008 -8.303 -5.615 25 B_U512:A524_B B 512 ? B 524 ? 20 1 1 A C 13 1_555 A G 23 1_555 0.273 -0.214 0.065 -1.510 -1.793 5.450 26 B_C513:G523_B B 513 ? B 523 ? 19 1 1 A A 14 1_555 A U 8 1_555 -3.854 -2.163 0.619 5.256 8.197 -97.354 27 B_A514:U508_B B 514 ? B 508 ? 24 4 1 A G 15 1_555 A C 49 1_555 0.136 3.894 0.118 6.985 5.350 152.775 28 B_G515:C549_B B 515 ? B 549 ? 22 2 1 A G 20 1_555 A C 57 1_555 -0.329 0.279 -0.221 -22.334 -24.117 2.623 29 B_G520:C557_B B 520 ? B 557 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 73 1_555 A C 2 1_555 A G 72 1_555 -0.485 -1.698 3.420 -4.584 9.317 33.724 -4.174 0.128 2.902 15.607 7.679 35.242 1 BB_C501C502:G572G573_BB B 501 ? B 573 ? B 502 ? B 572 ? 1 A C 2 1_555 A G 72 1_555 A G 3 1_555 A C 71 1_555 -0.232 -1.889 3.055 -1.480 13.043 28.751 -5.455 0.203 2.036 24.705 2.803 31.548 2 BB_C502G503:C571G572_BB B 502 ? B 572 ? B 503 ? B 571 ? 1 A G 3 1_555 A C 71 1_555 A G 4 1_555 A C 70 1_555 -0.562 -1.230 3.178 -0.719 4.947 34.479 -2.767 0.836 2.989 8.292 1.205 34.828 3 BB_G503G504:C570C571_BB B 503 ? B 571 ? B 504 ? B 570 ? 1 A G 4 1_555 A C 70 1_555 A C 5 1_555 A G 69 1_555 0.779 -1.280 3.202 0.920 6.303 31.497 -3.382 -1.251 2.918 11.465 -1.673 32.119 4 BB_G504C505:G569C570_BB B 504 ? B 570 ? B 505 ? B 569 ? 1 A C 5 1_555 A G 69 1_555 A G 6 1_555 A C 68 1_555 0.303 -2.076 3.282 0.002 13.668 27.970 -6.138 -0.566 2.066 26.377 -0.004 31.071 5 BB_C505G506:C568G569_BB B 505 ? B 569 ? B 506 ? B 568 ? 1 A G 6 1_555 A C 68 1_555 A G 7 1_555 A C 67 1_555 -0.754 -1.480 3.233 1.264 9.728 33.925 -3.775 1.417 2.691 16.254 -2.113 35.274 6 BB_G506G507:C567C568_BB B 506 ? B 568 ? B 507 ? B 567 ? 1 A G 7 1_555 A C 67 1_555 A G 50 1_555 A C 66 1_555 0.116 -2.071 3.138 -0.757 7.771 32.523 -4.742 -0.312 2.585 13.631 1.328 33.423 7 BB_G507G550:C566C567_BB B 507 ? B 567 ? B 550 ? B 566 ? 1 A G 50 1_555 A C 66 1_555 A C 51 1_555 A G 65 1_555 -0.633 -1.530 3.092 0.328 1.409 34.667 -2.767 1.108 3.023 2.364 -0.551 34.696 8 BB_G550C551:G565C566_BB B 550 ? B 566 ? B 551 ? B 565 ? 1 A C 51 1_555 A G 65 1_555 A U 52 1_555 A G 64 1_555 0.291 -1.383 3.393 0.124 2.854 41.353 -2.265 -0.397 3.296 4.035 -0.175 41.447 9 BB_C551U552:G564G565_BB B 551 ? B 565 ? B 552 ? B 564 ? 1 A U 52 1_555 A G 64 1_555 A G 53 1_555 A C 63 1_555 -0.026 -1.929 3.260 6.749 8.489 20.714 -7.332 2.105 2.195 21.787 -17.322 23.353 10 BB_U552G553:C563G564_BB B 552 ? B 564 ? B 553 ? B 563 ? 1 A G 53 1_555 A C 63 1_555 A G 54 1_555 A C 62 1_555 0.941 -2.082 3.329 1.723 5.672 29.258 -5.184 -1.481 2.932 11.086 -3.367 29.840 11 BB_G553G554:C562C563_BB B 553 ? B 563 ? B 554 ? B 562 ? 1 A G 54 1_555 A C 62 1_555 A U 55 1_555 A A 59 1_555 -2.000 -2.172 3.185 2.731 1.189 91.125 -1.543 1.451 3.115 0.833 -1.912 91.163 12 BB_G554U555:A559C562_BB B 554 ? B 562 ? B 555 ? B 559 ? 1 A U 55 1_555 A A 59 1_555 A U 56 1_555 A G 19 1_555 2.182 -1.783 3.498 11.999 3.699 41.325 -2.841 -1.622 3.794 5.101 -16.548 43.110 13 BB_U555U556:G519A559_BB B 555 ? B 559 ? B 556 ? B 519 ? 1 A A 37 1_555 A U 34 1_555 A A 39 1_555 A C 33 1_555 2.663 -3.465 4.865 -8.894 19.490 46.949 -5.648 -3.825 2.797 23.110 10.545 51.353 14 BB_A537A539:C533U534_BB B 537 ? B 534 ? B 539 ? B 533 ? 1 A A 39 1_555 A C 33 1_555 A U 40 1_555 A A 32 1_555 0.575 -0.902 3.493 -0.009 13.713 43.591 -2.405 -0.742 3.088 17.945 0.012 45.597 15 BB_A539U540:A532C533_BB B 539 ? B 533 ? B 540 ? B 532 ? 1 A U 40 1_555 A A 32 1_555 A C 41 1_555 A G 31 1_555 -0.708 -1.516 3.486 -8.276 8.827 34.376 -3.704 -0.061 3.099 14.394 13.495 36.382 16 BB_U540C541:G531A532_BB B 540 ? B 532 ? B 541 ? B 531 ? 1 A C 41 1_555 A G 31 1_555 A C 42 1_555 A G 30 1_555 0.588 -1.231 3.433 1.731 5.737 43.143 -2.229 -0.621 3.271 7.757 -2.341 43.538 17 BB_C541C542:G530G531_BB B 541 ? B 531 ? B 542 ? B 530 ? 1 A C 42 1_555 A G 30 1_555 A G 43 1_555 A C 29 1_555 0.351 -1.993 3.159 0.714 9.936 26.304 -6.115 -0.578 2.278 20.903 -1.501 28.096 18 BB_C542G543:C529G530_BB B 542 ? B 530 ? B 543 ? B 529 ? 1 A G 43 1_555 A C 29 1_555 A C 44 1_555 A G 28 1_555 -0.258 -1.785 3.187 0.982 2.561 33.026 -3.541 0.610 3.035 4.496 -1.724 33.137 19 BB_G543C544:G528C529_BB B 543 ? B 529 ? B 544 ? B 528 ? 1 A C 44 1_555 A G 28 1_555 A A 45 1_555 A G 27 1_555 -0.946 -1.811 3.222 4.260 4.866 33.306 -3.831 2.257 2.798 8.392 -7.347 33.910 20 BB_C544A545:G527G528_BB B 544 ? B 528 ? B 545 ? B 527 ? 1 A A 45 1_555 A G 27 1_555 A G 10 1_555 A C 26 1_555 -3.036 -2.761 2.894 8.016 4.867 63.906 -2.753 3.118 2.346 4.572 -7.530 64.518 21 BB_A545G510:C526G527_BB B 545 ? B 527 ? B 510 ? B 526 ? 1 A G 10 1_555 A C 26 1_555 A U 11 1_555 A A 25 1_555 -0.499 -1.335 3.303 -2.296 7.490 37.093 -2.993 0.481 3.011 11.614 3.560 37.883 22 BB_G510U511:A525C526_BB B 510 ? B 526 ? B 511 ? B 525 ? 1 A U 11 1_555 A A 25 1_555 A U 12 1_555 A A 24 1_555 -0.895 -0.942 2.944 4.504 6.756 32.348 -2.602 2.200 2.557 11.893 -7.929 33.325 23 BB_U511U512:A524A525_BB B 511 ? B 525 ? B 512 ? B 524 ? 1 A U 12 1_555 A A 24 1_555 A C 13 1_555 A G 23 1_555 1.822 -1.469 3.300 -0.939 5.471 28.147 -4.148 -3.881 2.907 11.113 1.906 28.678 24 BB_U512C513:G523A524_BB B 512 ? B 524 ? B 513 ? B 523 ? 1 A C 13 1_555 A G 23 1_555 A A 14 1_555 A U 8 1_555 -1.339 -0.556 3.126 1.351 -4.663 64.881 -0.331 1.299 3.129 -4.340 -1.257 65.043 25 BB_C513A514:U508G523_BB B 513 ? B 523 ? B 514 ? B 508 ? 1 A A 14 1_555 A U 8 1_555 A G 15 1_555 A C 49 1_555 1.824 -3.214 3.355 2.521 7.514 -69.694 2.515 1.684 3.582 -6.553 2.199 -70.087 26 BB_A514G515:C549U508_BB B 514 ? B 508 ? B 515 ? B 549 ? # _atom_sites.entry_id 1J1U _atom_sites.fract_transf_matrix[1][1] 0.011520 _atom_sites.fract_transf_matrix[1][2] 0.006651 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013302 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006407 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_