HEADER TRANSCRIPTION 05-JUL-02 1J5Y TITLE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR (TM1602) FROM TITLE 2 THERMOTOGA MARITIMA AT 2.3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM1602; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, TM1602, TRANSCRIPTIONAL REGULATOR, BIOTIN KEYWDS 2 REPRESSOR FAMILY, JCSG, CONSERVED HYPOTHETICAL PROTEIN, PSI, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 4 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 11 16-OCT-24 1J5Y 1 REMARK REVDAT 10 25-JAN-23 1J5Y 1 REMARK SEQADV LINK REVDAT 9 18-JUL-18 1J5Y 1 REMARK REVDAT 8 13-JUL-11 1J5Y 1 VERSN REVDAT 7 24-FEB-09 1J5Y 1 VERSN REVDAT 6 24-JUL-07 1J5Y 1 JRNL REVDAT 5 28-MAR-06 1J5Y 1 JRNL REVDAT 4 18-JAN-05 1J5Y 1 AUTHOR KEYWDS REMARK REVDAT 3 08-JUL-03 1J5Y 1 REMARK REVDAT 2 14-AUG-02 1J5Y 1 KEYWDS REVDAT 1 31-JUL-02 1J5Y 0 JRNL AUTH D.WEEKES,M.D.MILLER,S.S.KRISHNA,D.MCMULLAN,T.M.MCPHILLIPS, JRNL AUTH 2 C.ACOSTA,J.M.CANAVES,M.A.ELSLIGER,R.FLOYD,S.K.GRZECHNIK, JRNL AUTH 3 L.JAROSZEWSKI,H.E.KLOCK,E.KOESEMA,J.S.KOVARIK,A.KREUSCH, JRNL AUTH 4 A.T.MORSE,K.QUIJANO,G.SPRAGGON,H.VAN DEN BEDEM,G.WOLF, JRNL AUTH 5 K.O.HODGSON,J.WOOLEY,A.M.DEACON,A.GODZIK,S.A.LESLEY, JRNL AUTH 6 I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF A TRANSCRIPTION REGULATOR (TM1602) FROM JRNL TITL 2 THERMOTOGA MARITIMA AT 2.3 A RESOLUTION. JRNL REF PROTEINS V. 67 247 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17256761 JRNL DOI 10.1002/PROT.21221 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : STANDARD CNS DICTIONARY/ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 574 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 928 REMARK 3 BIN R VALUE (WORKING SET) : 0.2175 REMARK 3 BIN FREE R VALUE : 0.2693 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 48 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1347 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 6.00 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.470 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.360 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.208 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.710 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.980 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT CORRECTION REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 34.42 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: POOR ELECTRON DENSITY (BROKEN 2FO-FC REMARK 3 DENSITY AT THE 1 SIGMA LEVEL AND SOME NEGATIVE FO-FC DENSITY AT REMARK 3 THE 3 SIGMA LEVEL) INDICATE THAT THE SIDECHAINS OF THE FOLLOWING REMARK 3 RESIDUES MAY BE MORE DISORDERED THAN INDICATED BY THEIR B- REMARK 3 FACTORS: GLN-8, GLU-9, ARG-20, GLU-23, ARG-112, GLU- 136, GLU- REMARK 3 156, AND GLU-173. NO ELECTRON DENSITY WAS OBSERVED FOR SIDECHAIN REMARK 3 ATOMS BEYOND CB FOR LYS-134. THESE ATOMS WERE GIVEN AN OCCUPANCY REMARK 3 OF ZERO. REMARK 4 REMARK 4 1J5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000001653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162, 0.979105, 0.979445 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, CCP4 REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11360 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.677 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M NAH2PO4/0.8 M KH2PO4, 0.1 M REMARK 280 HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, REMARK 280 TEMPERATURE 293K, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 13050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 90.95660 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 90.95660 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 HIS A 2 REMARK 465 GLY A 175 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 134 CG CD CE NZ REMARK 600 REMARK 600 HETEROGEN REMARK 600 NI ASSIGNED BASED ON ELECTRON DENSITY AND REMARK 600 COORDINATION, POTASSIUM ION BASED ON REMARK 600 ELECTRON DENSITY AND ENVIRONMENT. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 18 O REMARK 620 2 GLU A 19 O 72.9 REMARK 620 3 SER A 21 O 81.7 88.8 REMARK 620 4 LEU A 64 O 69.6 101.0 145.0 REMARK 620 5 GLY A 66 N 116.3 74.7 149.4 64.9 REMARK 620 6 HOH A 223 O 132.6 154.2 98.3 87.4 87.3 REMARK 620 7 HOH A 255 O 53.2 124.3 72.1 74.7 138.4 81.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 79 NE2 REMARK 620 2 GLU A 87 OE2 82.0 REMARK 620 3 GLU A 87 OE1 86.7 55.1 REMARK 620 4 HIS A 146 NE2 83.3 107.8 161.4 REMARK 620 5 HIS A 148 NE2 171.6 89.8 90.0 97.6 REMARK 620 6 HOH A 241 O 94.7 154.3 99.4 97.0 93.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 283459 RELATED DB: TARGETDB DBREF 1J5Y A 1 175 UNP Q9X1T8 Q9X1T8_THEMA 1 175 SEQADV 1J5Y MSE A -11 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y GLY A -10 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y SER A -9 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y ASP A -8 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y LYS A -7 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y ILE A -6 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A -5 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A -4 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A -3 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A -2 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A -1 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y HIS A 0 UNP Q9X1T8 EXPRESSION TAG SEQADV 1J5Y MSE A 1 UNP Q9X1T8 MET 1 MODIFIED RESIDUE SEQADV 1J5Y MSE A 3 UNP Q9X1T8 MET 3 MODIFIED RESIDUE SEQADV 1J5Y MSE A 130 UNP Q9X1T8 MET 130 MODIFIED RESIDUE SEQADV 1J5Y MSE A 132 UNP Q9X1T8 MET 132 MODIFIED RESIDUE SEQADV 1J5Y MSE A 158 UNP Q9X1T8 MET 158 MODIFIED RESIDUE SEQADV 1J5Y MSE A 162 UNP Q9X1T8 MET 162 MODIFIED RESIDUE SEQRES 1 A 187 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 187 HIS MSE LYS THR VAL ARG GLN GLU ARG LEU LYS SER ILE SEQRES 3 A 187 VAL ARG ILE LEU GLU ARG SER LYS GLU PRO VAL SER GLY SEQRES 4 A 187 ALA GLN LEU ALA GLU GLU LEU SER VAL SER ARG GLN VAL SEQRES 5 A 187 ILE VAL GLN ASP ILE ALA TYR LEU ARG SER LEU GLY TYR SEQRES 6 A 187 ASN ILE VAL ALA THR PRO ARG GLY TYR VAL LEU ALA GLY SEQRES 7 A 187 GLY LYS SER GLY VAL SER ARG LEU VAL ALA VAL LYS HIS SEQRES 8 A 187 ALA PRO GLU GLU ILE LYS GLU GLU LEU LEU CYS VAL VAL SEQRES 9 A 187 ARG ASN GLY GLY ARG ILE VAL ASP VAL ILE VAL GLU HIS SEQRES 10 A 187 PRO VAL TYR GLY GLU ILE ARG GLY ILE ILE ASP VAL SER SEQRES 11 A 187 SER GLU GLU GLU VAL LEU LYS PHE VAL ASN LEU MSE GLU SEQRES 12 A 187 MSE ALA LYS THR GLU PRO LEU LEU THR LEU SER GLY GLY SEQRES 13 A 187 VAL HIS LEU HIS THR ILE GLU ALA PRO ASP GLU GLU THR SEQRES 14 A 187 MSE GLU ARG ILE MSE ARG GLU LEU LYS LYS LYS GLY PHE SEQRES 15 A 187 LEU ILE GLU GLU GLY MODRES 1J5Y MSE A 3 MET SELENOMETHIONINE MODRES 1J5Y MSE A 130 MET SELENOMETHIONINE MODRES 1J5Y MSE A 132 MET SELENOMETHIONINE MODRES 1J5Y MSE A 158 MET SELENOMETHIONINE MODRES 1J5Y MSE A 162 MET SELENOMETHIONINE HET MSE A 3 8 HET MSE A 130 8 HET MSE A 132 8 HET MSE A 158 8 HET MSE A 162 8 HET NI A 201 1 HET K A 202 1 HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION HETNAM K POTASSIUM ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 NI NI 2+ FORMUL 3 K K 1+ FORMUL 4 HOH *97(H2 O) HELIX 1 1 MSE A 3 SER A 21 1 19 HELIX 2 2 SER A 26 SER A 35 1 10 HELIX 3 3 SER A 37 GLY A 52 1 16 HELIX 4 4 ALA A 80 GLU A 82 5 3 HELIX 5 5 GLU A 83 ASN A 94 1 12 HELIX 6 6 SER A 119 ALA A 133 1 15 HELIX 7 7 THR A 140 GLY A 143 5 4 HELIX 8 8 ASP A 154 LYS A 168 1 15 SHEET 1 A 2 VAL A 56 THR A 58 0 SHEET 2 A 2 GLY A 61 VAL A 63 -1 O VAL A 63 N VAL A 56 SHEET 1 B 4 VAL A 71 LYS A 78 0 SHEET 2 B 4 VAL A 145 ALA A 152 -1 O ILE A 150 N ARG A 73 SHEET 3 B 4 ARG A 97 HIS A 105 -1 N ILE A 102 O LEU A 147 SHEET 4 B 4 GLY A 109 VAL A 117 -1 O GLY A 113 N VAL A 101 LINK C MSE A 3 N LYS A 4 1555 1555 1.33 LINK C LEU A 129 N MSE A 130 1555 1555 1.33 LINK C MSE A 130 N GLU A 131 1555 1555 1.33 LINK C GLU A 131 N MSE A 132 1555 1555 1.33 LINK C MSE A 132 N ALA A 133 1555 1555 1.33 LINK C THR A 157 N MSE A 158 1555 1555 1.33 LINK C MSE A 158 N GLU A 159 1555 1555 1.33 LINK C ILE A 161 N MSE A 162 1555 1555 1.34 LINK C MSE A 162 N ARG A 163 1555 1555 1.32 LINK O LEU A 18 K K A 202 1555 1555 2.90 LINK O GLU A 19 K K A 202 1555 1555 3.18 LINK O SER A 21 K K A 202 1555 1555 2.72 LINK O LEU A 64 K K A 202 1555 1555 2.83 LINK N GLY A 66 K K A 202 1555 1555 3.30 LINK NE2 HIS A 79 NI NI A 201 1555 1555 2.38 LINK OE2 GLU A 87 NI NI A 201 1555 1555 2.53 LINK OE1 GLU A 87 NI NI A 201 1555 1555 2.10 LINK NE2 HIS A 146 NI NI A 201 1555 1555 2.30 LINK NE2 HIS A 148 NI NI A 201 1555 1555 2.12 LINK NI NI A 201 O HOH A 241 1555 1555 2.31 LINK K K A 202 O HOH A 223 1555 1555 3.07 LINK K K A 202 O HOH A 255 1555 1555 3.45 SITE 1 AC1 5 HIS A 79 GLU A 87 HIS A 146 HIS A 148 SITE 2 AC1 5 HOH A 241 SITE 1 AC2 6 LEU A 18 GLU A 19 SER A 21 LEU A 64 SITE 2 AC2 6 GLY A 66 HOH A 223 CRYST1 90.957 90.957 90.957 90.00 90.00 90.00 P 2 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010994 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010994 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010994 0.00000 HETATM 1 N MSE A 3 27.637 30.458 12.059 1.00 58.57 N HETATM 2 CA MSE A 3 28.903 31.260 12.210 1.00 58.54 C HETATM 3 C MSE A 3 30.161 30.428 11.905 1.00 55.22 C HETATM 4 O MSE A 3 30.320 29.306 12.400 1.00 54.04 O HETATM 5 CB MSE A 3 28.975 31.845 13.632 1.00 64.67 C HETATM 6 CG MSE A 3 30.134 32.803 13.909 1.00 71.44 C HETATM 7 SE MSE A 3 29.628 34.284 15.132 1.00 85.94 SE HETATM 8 CE MSE A 3 28.727 33.295 16.546 1.00 79.41 C