HEADER IMMUNE SYSTEM 29-MAY-01 1JA3 TITLE CRYSTAL STRUCTURE OF THE MURINE NK CELL INHIBITORY RECEPTOR LY-49I COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I RECOGNITION RECEPTOR LY49I; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TYPE LECTIN-LIKE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: 129-J; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21CODONPLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS NK-CELL SURFACE GLYCOPROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.DIMASI,W.M.SAWICKI,L.A.REINECK,Y.LI,K.NATARAJAN,D.H.MURGULIES, AUTHOR 2 A.R.MARIUZZA REVDAT 4 16-AUG-23 1JA3 1 REMARK REVDAT 3 24-FEB-09 1JA3 1 VERSN REVDAT 2 01-APR-03 1JA3 1 JRNL REVDAT 1 17-JUL-02 1JA3 0 JRNL AUTH N.DIMASI,M.W.SAWICKI,L.A.REINECK,Y.LI,K.NATARAJAN, JRNL AUTH 2 D.H.MARGULIES,R.A.MARIUZZA JRNL TITL CRYSTAL STRUCTURE OF THE LY49I NATURAL KILLER CELL RECEPTOR JRNL TITL 2 REVEALS VARIABILITY IN DIMERIZATION MODE WITHIN THE LY49 JRNL TITL 3 FAMILY. JRNL REF J.MOL.BIOL. V. 320 573 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12096910 JRNL DOI 10.1016/S0022-2836(02)00498-9 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 234421.550 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 5162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.333 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.600 REMARK 3 FREE R VALUE TEST SET COUNT : 291 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.018 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 615 REMARK 3 BIN R VALUE (WORKING SET) : 0.5660 REMARK 3 BIN FREE R VALUE : 0.6460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 37 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.106 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.75000 REMARK 3 B22 (A**2) : 7.75000 REMARK 3 B33 (A**2) : -15.51000 REMARK 3 B12 (A**2) : 14.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.66 REMARK 3 ESD FROM SIGMAA (A) : 1.09 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.150 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 12.540; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 15.510; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.080 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.640 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.26 REMARK 3 BSOL : 20.54 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JA3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013549. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.15000 REMARK 200 R SYM FOR SHELL (I) : 0.06100 REMARK 200 FOR SHELL : 0.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1QO3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000 12%, NACL 0.2 M, CHESS 0.1 M, REMARK 280 PH 9.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.86650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.48104 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.86133 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 45.86650 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 26.48104 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.86133 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 45.86650 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 26.48104 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.86133 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.96207 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 59.72267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 52.96207 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 59.72267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 52.96207 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 59.72267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 136 REMARK 465 GLY A 137 REMARK 465 ARG A 138 REMARK 465 GLY A 139 REMARK 465 ILE A 222 REMARK 465 ARG A 223 REMARK 465 LYS A 224 REMARK 465 MET A 225 REMARK 465 ASN A 226 REMARK 465 PHE A 227 REMARK 465 LYS A 228 REMARK 465 ASP A 262 REMARK 465 THR B 136 REMARK 465 GLY B 137 REMARK 465 ARG B 138 REMARK 465 GLY B 139 REMARK 465 GLY B 215 REMARK 465 PRO B 216 REMARK 465 SER B 217 REMARK 465 ILE B 222A REMARK 465 ARG B 222B REMARK 465 LYS B 222C REMARK 465 MET B 222D REMARK 465 ASN B 222E REMARK 465 PRO B 261 REMARK 465 ASP B 262 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 221 N SER A 229 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 218 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 LYS B 222 C - N - CA ANGL. DEV. = 18.4 DEGREES REMARK 500 LYS B 222 CA - C - O ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 155 69.44 -107.87 REMARK 500 LYS A 157 92.75 -53.10 REMARK 500 SER A 161 9.10 -64.52 REMARK 500 LYS A 164 -65.94 -27.24 REMARK 500 ILE A 177 94.54 -69.61 REMARK 500 ASP A 179 171.70 176.04 REMARK 500 PRO A 192 100.17 -48.99 REMARK 500 LYS A 204 16.84 -56.72 REMARK 500 TRP A 210 -56.72 -123.29 REMARK 500 ILE A 211 -39.67 -162.53 REMARK 500 ASP A 212 -125.99 -134.24 REMARK 500 PRO A 215 42.21 -60.20 REMARK 500 LYS A 217 -51.65 -165.13 REMARK 500 PHE A 218 92.11 -54.41 REMARK 500 ASP A 219 56.15 -97.27 REMARK 500 ARG A 239 -175.60 -173.35 REMARK 500 GLU A 241 149.91 176.06 REMARK 500 THR A 243 170.08 139.03 REMARK 500 ASP A 244 149.71 -35.05 REMARK 500 PRO A 248 94.22 -59.80 REMARK 500 LYS A 259 -105.41 -130.13 REMARK 500 PHE A 260 -50.55 -174.85 REMARK 500 LYS B 141 78.36 -153.59 REMARK 500 MET B 155 68.35 -118.94 REMARK 500 LYS B 157 87.84 -34.21 REMARK 500 TRP B 160 -56.61 -23.07 REMARK 500 SER B 161 2.17 -52.97 REMARK 500 ASN B 166 -74.85 -59.62 REMARK 500 TYR B 170 27.40 -72.08 REMARK 500 SER B 171 19.37 42.58 REMARK 500 PRO B 173 159.42 -49.52 REMARK 500 ILE B 177 107.03 -52.45 REMARK 500 LEU B 183 -59.98 -29.04 REMARK 500 VAL B 190 153.13 -27.97 REMARK 500 PRO B 192 96.42 -42.35 REMARK 500 LYS B 204 17.39 -69.66 REMARK 500 ASP B 220 138.93 -174.02 REMARK 500 SER B 229 -63.49 -145.92 REMARK 500 ARG B 230 163.21 163.69 REMARK 500 ARG B 239 165.44 179.92 REMARK 500 GLU B 241 151.94 179.67 REMARK 500 THR B 243 178.90 149.39 REMARK 500 ASP B 244 150.07 -45.58 REMARK 500 ILE B 252 88.23 -154.95 REMARK 500 LYS B 259 -113.60 -125.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER A 229 11.40 REMARK 500 REMARK 500 REMARK: NULL DBREF 1JA3 A 136 262 UNP Q9JHN9 Q9JHN9_MOUSE 140 266 DBREF 1JA3 B 136 262 UNP Q9JHN9 Q9JHN9_MOUSE 140 266 SEQRES 1 A 127 THR GLY ARG GLY VAL LYS TYR TRP PHE CYS TYR GLY THR SEQRES 2 A 127 LYS CYS TYR TYR PHE ILE MET ASN LYS THR THR TRP SER SEQRES 3 A 127 GLY CYS LYS ALA ASN CYS GLN HIS TYR SER VAL PRO ILE SEQRES 4 A 127 VAL LYS ILE GLU ASP GLU ASP GLU LEU LYS PHE LEU GLN SEQRES 5 A 127 ARG HIS VAL ILE PRO GLU GLY TYR TRP ILE GLY LEU SER SEQRES 6 A 127 TYR ASP LYS LYS LYS LYS GLU TRP ALA TRP ILE ASP ASN SEQRES 7 A 127 GLY PRO SER LYS PHE ASP MET LYS ILE ARG LYS MET ASN SEQRES 8 A 127 PHE LYS SER ARG GLY CYS VAL PHE LEU SER LYS ALA ARG SEQRES 9 A 127 ILE GLU ASP THR ASP CYS ASN ILE PRO TYR TYR CYS ILE SEQRES 10 A 127 CYS GLY LYS LYS LEU ASP LYS PHE PRO ASP SEQRES 1 B 127 THR GLY ARG GLY VAL LYS TYR TRP PHE CYS TYR GLY THR SEQRES 2 B 127 LYS CYS TYR TYR PHE ILE MET ASN LYS THR THR TRP SER SEQRES 3 B 127 GLY CYS LYS ALA ASN CYS GLN HIS TYR SER VAL PRO ILE SEQRES 4 B 127 VAL LYS ILE GLU ASP GLU ASP GLU LEU LYS PHE LEU GLN SEQRES 5 B 127 ARG HIS VAL ILE PRO GLU GLY TYR TRP ILE GLY LEU SER SEQRES 6 B 127 TYR ASP LYS LYS LYS LYS GLU TRP ALA TRP ILE ASP ASN SEQRES 7 B 127 GLY PRO SER LYS PHE ASP MET LYS ILE ARG LYS MET ASN SEQRES 8 B 127 PHE LYS SER ARG GLY CYS VAL PHE LEU SER LYS ALA ARG SEQRES 9 B 127 ILE GLU ASP THR ASP CYS ASN ILE PRO TYR TYR CYS ILE SEQRES 10 B 127 CYS GLY LYS LYS LEU ASP LYS PHE PRO ASP HELIX 1 1 TRP A 160 TYR A 170 1 11 HELIX 2 2 ASP A 179 VAL A 190 1 12 HELIX 3 3 TRP B 160 TYR B 170 1 11 HELIX 4 4 ASP B 179 VAL B 190 1 12 SHEET 1 A 3 LYS A 141 TYR A 146 0 SHEET 2 A 3 LYS A 149 THR A 158 -1 O LYS A 149 N TYR A 146 SHEET 3 A 3 TYR A 249 LYS A 255 -1 N TYR A 249 O THR A 158 SHEET 1 B 4 TRP A 208 ALA A 209 0 SHEET 2 B 4 TYR A 195 TYR A 201 -1 N SER A 200 O ALA A 209 SHEET 3 B 4 CYS A 232 LEU A 235 -1 N VAL A 233 O LEU A 199 SHEET 4 B 4 ILE A 240 THR A 243 -1 O GLU A 241 N PHE A 234 SHEET 1 C 3 LYS B 141 TYR B 146 0 SHEET 2 C 3 LYS B 149 ILE B 154 -1 O LYS B 149 N TYR B 146 SHEET 3 C 3 CYS B 253 LYS B 256 -1 N CYS B 253 O TYR B 152 SHEET 1 D 4 TRP B 208 TRP B 210 0 SHEET 2 D 4 TYR B 195 TYR B 201 -1 O SER B 200 N ALA B 209 SHEET 3 D 4 CYS B 232 LEU B 235 -1 N VAL B 233 O LEU B 199 SHEET 4 D 4 ILE B 240 THR B 243 -1 O GLU B 241 N PHE B 234 SSBOND 1 CYS A 145 CYS A 150 1555 1555 2.06 SSBOND 2 CYS A 163 CYS A 251 1555 1555 2.03 SSBOND 3 CYS A 167 CYS A 253 1555 1555 2.04 SSBOND 4 CYS A 232 CYS A 245 1555 1555 2.03 SSBOND 5 CYS B 145 CYS B 150 1555 1555 2.03 SSBOND 6 CYS B 163 CYS B 251 1555 1555 2.03 SSBOND 7 CYS B 167 CYS B 253 1555 1555 2.03 SSBOND 8 CYS B 232 CYS B 245 1555 1555 2.03 CRYST1 91.733 91.733 89.584 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010901 0.006294 0.000000 0.00000 SCALE2 0.000000 0.012588 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011163 0.00000