HEADER CHAPERONE 28-JUN-01 1JHN TITLE CRYSTAL STRUCTURE OF THE LUMENAL DOMAIN OF CALNEXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALNEXIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LUMENAL DOMAIN (RESIDUES 45-468); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 STRAIN: FAMILIARIS; SOURCE 6 CELL_LINE: SF9; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PBLUBAC KEYWDS JELLY-ROLL, BETA SANDWICH, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.D.SCHRAG,J.M.BERGERON,Y.LI,S.BORISOVA,M.HAHN,D.Y.THOMAS,M.CYGLER REVDAT 4 13-NOV-24 1JHN 1 REMARK SHEET LINK REVDAT 3 24-FEB-09 1JHN 1 VERSN REVDAT 2 01-APR-03 1JHN 1 JRNL REVDAT 1 10-OCT-01 1JHN 0 JRNL AUTH J.D.SCHRAG,J.J.BERGERON,Y.LI,S.BORISOVA,M.HAHN,D.Y.THOMAS, JRNL AUTH 2 M.CYGLER JRNL TITL THE STRUCTURE OF CALNEXIN, AN ER CHAPERONE INVOLVED IN JRNL TITL 2 QUALITY CONTROL OF PROTEIN FOLDING. JRNL REF MOL.CELL V. 8 633 2001 JRNL REFN ISSN 1097-2765 JRNL PMID 11583625 JRNL DOI 10.1016/S1097-2765(01)00318-5 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.HAHN,S.BORISOVA,J.D.SCHRAG,D.C.TESSIER,A.ZAPUN,R.TOM, REMARK 1 AUTH 2 A.A.KAMEN,J.J.BERGERON,D.Y.THOMAS,M.CYGLER REMARK 1 TITL IDENTIFICATION AND CRYSTALLIZATION OF A PROTEASE-RESISTANT REMARK 1 TITL 2 CORE OF CALNEXIN THAT RETAINS BIOLOGICAL ACTIVITY REMARK 1 REF J.STRUCT.BIOL. V. 123 260 1998 REMARK 1 REFN ISSN 1047-8477 REMARK 1 DOI 10.1006/JSBI.1998.4032 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 11392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.327 REMARK 3 FREE R VALUE : 0.377 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 529 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2853 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.90000 REMARK 3 B22 (A**2) : -11.90000 REMARK 3 B33 (A**2) : 23.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.61 REMARK 3 ESD FROM SIGMAA (A) : 0.82 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.76 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.06 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.410 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PHASE RESTRAINTS USED REMARK 4 REMARK 4 1JHN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12339 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : 0.04600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.24500 REMARK 200 R SYM FOR SHELL (I) : 0.24500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS, SAS, MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, MPD, CALCIUM CHLORIDE, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.73800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.88600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 107.60700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.88600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.86900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.88600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 107.60700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.88600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.86900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 71.73800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 45 REMARK 465 LYS A 46 REMARK 465 SER A 47 REMARK 465 LYS A 48 REMARK 465 PRO A 49 REMARK 465 ASP A 50 REMARK 465 THR A 51 REMARK 465 SER A 52 REMARK 465 ALA A 53 REMARK 465 PRO A 54 REMARK 465 THR A 55 REMARK 465 SER A 56 REMARK 465 PRO A 57 REMARK 465 LYS A 58 REMARK 465 VAL A 59 REMARK 465 THR A 60 REMARK 465 LYS A 91 REMARK 465 ASP A 92 REMARK 465 ASP A 93 REMARK 465 THR A 94 REMARK 465 ASP A 95 REMARK 465 ASP A 96 REMARK 465 GLU A 97 REMARK 465 ILE A 98 REMARK 465 ALA A 99 REMARK 465 LYS A 100 REMARK 465 TYR A 101 REMARK 465 LEU A 263 REMARK 465 LEU A 264 REMARK 465 ASN A 265 REMARK 465 ASP A 266 REMARK 465 MET A 267 REMARK 465 THR A 268 REMARK 465 PRO A 269 REMARK 465 LYS A 459 REMARK 465 LYS A 460 REMARK 465 ALA A 461 REMARK 465 ALA A 462 REMARK 465 ASP A 463 REMARK 465 GLY A 464 REMARK 465 ALA A 465 REMARK 465 ALA A 466 REMARK 465 GLU A 467 REMARK 465 PRO A 468 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 65 CG1 CG2 REMARK 470 THR A 80 OG1 CG2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 GLU A 106 CG CD OE1 OE2 REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 THR A 113 OG1 CG2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 LEU A 115 CG CD1 CD2 REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 VAL A 122 CG1 CG2 REMARK 470 HIS A 129 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 LEU A 141 CG CD1 CD2 REMARK 470 THR A 144 OG1 CG2 REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 GLN A 156 CG CD OE1 NE2 REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 PHE A 205 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 THR A 212 OG1 CG2 REMARK 470 VAL A 214 CG1 CG2 REMARK 470 GLU A 216 CB CG CD OE1 OE2 REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 ASN A 244 CG OD1 ND2 REMARK 470 ASP A 246 CG OD1 OD2 REMARK 470 SER A 248 OG REMARK 470 LEU A 252 CG CD1 CD2 REMARK 470 SER A 256 OG REMARK 470 ILE A 257 CD1 REMARK 470 ASN A 262 CG OD1 ND2 REMARK 470 ILE A 277 CG1 CG2 CD1 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 LYS A 284 CB CG CD CE NZ REMARK 470 GLU A 286 CG CD OE1 OE2 REMARK 470 LYS A 293 CD CE NZ REMARK 470 GLU A 307 CG CD OE1 OE2 REMARK 470 ASP A 336 CG OD1 OD2 REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 GLU A 345 CG CD OE1 OE2 REMARK 470 ILE A 356 CG1 CG2 CD1 REMARK 470 GLU A 362 CG CD OE1 OE2 REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 ASN A 391 CG OD1 ND2 REMARK 470 ARG A 401 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 402 CG CD CE NZ REMARK 470 ILE A 403 CG1 CG2 CD1 REMARK 470 PHE A 408 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 409 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 411 CG OD1 OD2 REMARK 470 GLU A 413 CG CD OE1 OE2 REMARK 470 LYS A 416 CG CD CE NZ REMARK 470 SER A 429 OG REMARK 470 ASP A 433 CG OD1 OD2 REMARK 470 ILE A 440 CG1 CG2 CD1 REMARK 470 ARG A 445 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 446 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 391 N ASN A 393 2.10 REMARK 500 O ASP A 233 N LYS A 235 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 329 C - N - CA ANGL. DEV. = 11.8 DEGREES REMARK 500 PRO A 392 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 PRO A 404 C - N - CA ANGL. DEV. = 14.1 DEGREES REMARK 500 PRO A 404 C - N - CD ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO A 414 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 62 163.00 160.31 REMARK 500 ALA A 63 -79.31 179.53 REMARK 500 PRO A 64 100.15 21.01 REMARK 500 SER A 67 -68.67 -104.69 REMARK 500 GLU A 69 -155.21 48.57 REMARK 500 VAL A 70 -69.54 -154.36 REMARK 500 TYR A 71 -44.74 71.38 REMARK 500 PHE A 72 130.47 166.52 REMARK 500 LEU A 81 30.47 -79.01 REMARK 500 LYS A 88 -2.04 -146.93 REMARK 500 ALA A 89 -94.37 -41.80 REMARK 500 GLU A 112 65.74 33.63 REMARK 500 THR A 113 -158.53 -52.44 REMARK 500 LYS A 114 11.09 -177.98 REMARK 500 MET A 124 82.64 -171.46 REMARK 500 SER A 125 -133.32 -173.07 REMARK 500 ARG A 126 -5.32 178.22 REMARK 500 LYS A 128 90.47 155.32 REMARK 500 HIS A 129 23.51 -66.54 REMARK 500 HIS A 130 79.10 -46.99 REMARK 500 ALA A 131 -152.41 -176.58 REMARK 500 ILE A 132 142.66 46.43 REMARK 500 SER A 133 -176.95 179.11 REMARK 500 LEU A 136 -172.13 -62.50 REMARK 500 PRO A 139 122.76 -36.82 REMARK 500 ASP A 143 -94.91 -128.41 REMARK 500 THR A 144 48.19 -97.70 REMARK 500 LYS A 145 134.39 -172.31 REMARK 500 ASN A 154 79.28 -174.23 REMARK 500 PHE A 155 82.23 -49.71 REMARK 500 ALA A 164 50.24 -145.95 REMARK 500 PRO A 173 -82.78 -44.92 REMARK 500 LEU A 175 78.00 -104.85 REMARK 500 ASN A 176 88.06 -55.74 REMARK 500 ASP A 178 -30.88 -28.18 REMARK 500 PHE A 180 80.86 -45.29 REMARK 500 HIS A 181 -174.90 -67.97 REMARK 500 PHE A 190 133.71 -171.74 REMARK 500 LYS A 194 115.65 -164.47 REMARK 500 GLU A 197 43.64 -175.78 REMARK 500 TYR A 199 87.82 40.81 REMARK 500 PHE A 203 101.37 -176.55 REMARK 500 ASN A 209 103.27 -57.91 REMARK 500 PRO A 210 25.65 -68.83 REMARK 500 LYS A 211 -81.97 -142.59 REMARK 500 HIS A 219 -169.32 -75.56 REMARK 500 LYS A 221 150.67 -43.56 REMARK 500 ARG A 222 174.22 -57.53 REMARK 500 ALA A 225 133.98 149.95 REMARK 500 LYS A 228 -65.70 -10.09 REMARK 500 REMARK 500 THIS ENTRY HAS 101 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 75 O REMARK 620 2 ASP A 118 OD1 130.9 REMARK 620 3 ASP A 118 OD2 138.9 39.9 REMARK 620 4 LYS A 119 O 81.3 66.5 106.3 REMARK 620 5 ASP A 437 OD1 114.4 82.9 104.2 62.2 REMARK 620 6 ASP A 437 OD2 140.7 88.1 72.6 116.7 57.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 900 DBREF 1JHN A 45 468 UNP P24643 CALX_CANFA 45 468 SEQRES 1 A 424 SER LYS SER LYS PRO ASP THR SER ALA PRO THR SER PRO SEQRES 2 A 424 LYS VAL THR TYR LYS ALA PRO VAL PRO SER GLY GLU VAL SEQRES 3 A 424 TYR PHE ALA ASP SER PHE ASP ARG GLY THR LEU SER GLY SEQRES 4 A 424 TRP ILE LEU SER LYS ALA LYS LYS ASP ASP THR ASP ASP SEQRES 5 A 424 GLU ILE ALA LYS TYR ASP GLY LYS TRP GLU VAL ASP GLU SEQRES 6 A 424 MET LYS GLU THR LYS LEU PRO GLY ASP LYS GLY LEU VAL SEQRES 7 A 424 LEU MET SER ARG ALA LYS HIS HIS ALA ILE SER ALA LYS SEQRES 8 A 424 LEU ASN LYS PRO PHE LEU PHE ASP THR LYS PRO LEU ILE SEQRES 9 A 424 VAL GLN TYR GLU VAL ASN PHE GLN ASN GLY ILE GLU CYS SEQRES 10 A 424 GLY GLY ALA TYR VAL LYS LEU LEU SER LYS THR PRO GLU SEQRES 11 A 424 LEU ASN LEU ASP GLN PHE HIS ASP LYS THR PRO TYR THR SEQRES 12 A 424 ILE MET PHE GLY PRO ASP LYS CYS GLY GLU ASP TYR LYS SEQRES 13 A 424 LEU HIS PHE ILE PHE ARG HIS LYS ASN PRO LYS THR GLY SEQRES 14 A 424 VAL TYR GLU GLU LYS HIS ALA LYS ARG PRO ASP ALA ASP SEQRES 15 A 424 LEU LYS THR TYR PHE THR ASP LYS LYS THR HIS LEU TYR SEQRES 16 A 424 THR LEU ILE LEU ASN PRO ASP ASN SER PHE GLU ILE LEU SEQRES 17 A 424 VAL ASP GLN SER ILE VAL ASN SER GLY ASN LEU LEU ASN SEQRES 18 A 424 ASP MET THR PRO PRO VAL ASN PRO SER ARG GLU ILE GLU SEQRES 19 A 424 ASP PRO GLU ASP GLN LYS PRO GLU ASP TRP ASP GLU ARG SEQRES 20 A 424 PRO LYS ILE PRO ASP PRO ASP ALA VAL LYS PRO ASP ASP SEQRES 21 A 424 TRP ASN GLU ASP ALA PRO ALA LYS ILE PRO ASP GLU GLU SEQRES 22 A 424 ALA THR LYS PRO ASP GLY TRP LEU ASP ASP GLU PRO GLU SEQRES 23 A 424 TYR VAL PRO ASP PRO ASP ALA GLU LYS PRO GLU ASP TRP SEQRES 24 A 424 ASP GLU ASP MET ASP GLY GLU TRP GLU ALA PRO GLN ILE SEQRES 25 A 424 ALA ASN PRO LYS CYS GLU SER ALA PRO GLY CYS GLY VAL SEQRES 26 A 424 TRP GLN ARG PRO MET ILE ASP ASN PRO ASN TYR LYS GLY SEQRES 27 A 424 LYS TRP LYS PRO PRO MET ILE ASP ASN PRO ASN TYR GLN SEQRES 28 A 424 GLY ILE TRP LYS PRO ARG LYS ILE PRO ASN PRO ASP PHE SEQRES 29 A 424 PHE GLU ASP LEU GLU PRO PHE LYS MET THR PRO PHE SER SEQRES 30 A 424 ALA ILE GLY LEU GLU LEU TRP SER MET THR SER ASP ILE SEQRES 31 A 424 PHE PHE ASP ASN PHE ILE VAL CYS GLY ASP ARG ARG VAL SEQRES 32 A 424 VAL ASP ASP TRP ALA ASN ASP GLY TRP GLY LEU LYS LYS SEQRES 33 A 424 ALA ALA ASP GLY ALA ALA GLU PRO HET CA A 900 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ HELIX 1 1 ASN A 176 PHE A 180 5 5 SHEET 1 A 3 ALA A 73 ASP A 74 0 SHEET 2 A 3 ASP A 437 CYS A 442 -1 O PHE A 439 N ASP A 74 SHEET 3 A 3 LEU A 147 VAL A 153 -1 O ILE A 148 N CYS A 442 SHEET 1 C 2 ALA A 131 PHE A 140 0 SHEET 2 C 2 PHE A 420 LEU A 425 -1 O PHE A 420 N PHE A 140 SHEET 1 D 2 TYR A 186 CYS A 195 0 SHEET 2 D 2 CYS A 161 GLY A 163 -1 SHEET 1 E 2 TYR A 186 CYS A 195 0 SHEET 2 E 2 VAL A 166 LEU A 169 -1 N VAL A 166 O PHE A 190 SHEET 1 F 1 MET A 388 ASP A 390 0 SHEET 1 G 2 LYS A 312 PRO A 314 0 SHEET 2 G 2 MET A 374 ASP A 376 -1 N ILE A 375 O ILE A 313 SSBOND 1 CYS A 161 CYS A 195 1555 1555 2.56 SSBOND 2 CYS A 361 CYS A 367 1555 1555 2.03 LINK O SER A 75 CA CA A 900 1555 1555 2.34 LINK OD1 ASP A 118 CA CA A 900 1555 1555 2.31 LINK OD2 ASP A 118 CA CA A 900 1555 1555 3.40 LINK O LYS A 119 CA CA A 900 1555 1555 3.26 LINK OD1 ASP A 437 CA CA A 900 1555 1555 2.36 LINK OD2 ASP A 437 CA CA A 900 1555 1555 2.20 SITE 1 AC1 4 SER A 75 ASP A 118 LYS A 119 ASP A 437 CRYST1 85.772 85.772 143.476 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011659 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006970 0.00000