HEADER VIRAL PROTEIN 05-JUL-01 1JJG TITLE SOLUTION STRUCTURE OF MYXOMA VIRUS PROTEIN M156R COMPND MOL_ID: 1; COMPND 2 MOLECULE: M156R; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYXOMA VIRUS (STRAIN LAUSANNE); SOURCE 3 ORGANISM_TAXID: 31530; SOURCE 4 STRAIN: LAUSANNE; SOURCE 5 GENE: M156R; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-LAMDADE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS BETA BARREL, S1 MOTIF, OB FOLD, MYXV156R, NESG PROJECT, STRUCTURAL KEYWDS 2 GENOMICS, EIF-2A HOMOLOG, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.RAMELOT,J.R.CORT,A.A.YEE,C.H.ARROWSMITH,M.A.KENNEDY,NORTHEAST AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 8 08-MAY-24 1JJG 1 REMARK REVDAT 7 14-JUN-23 1JJG 1 REMARK REVDAT 6 05-FEB-20 1JJG 1 REMARK REVDAT 5 24-FEB-09 1JJG 1 VERSN REVDAT 4 25-JAN-05 1JJG 1 AUTHOR KEYWDS REMARK REVDAT 3 13-JAN-04 1JJG 1 JRNL REVDAT 2 16-OCT-02 1JJG 2 KEYWDS AUTHOR JRNL REMARK REVDAT 2 2 2 MASTER REVDAT 1 06-MAR-02 1JJG 0 JRNL AUTH T.A.RAMELOT,J.R.CORT,A.A.YEE,F.LIU,M.B.GOSHE,A.M.EDWARDS, JRNL AUTH 2 R.D.SMITH,C.H.ARROWSMITH,T.E.DEVER,M.A.KENNEDY JRNL TITL MYXOMA VIRUS IMMUNOMODULATORY PROTEIN M156R IS A STRUCTURAL JRNL TITL 2 MIMIC OF EUKARYOTIC TRANSLATION INITIATION FACTOR EIF2ALPHA. JRNL REF J.MOL.BIOL. V. 322 943 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12367520 JRNL DOI 10.1016/S0022-2836(02)00858-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.YEE,X.CHANG,A.PINEDA-LUCENA,B.WU,A.SEMESI,B.LE,T.RAMELOT, REMARK 1 AUTH 2 G.M.LEE,S.BHATTACHARYYA,P.GUTIERREZ,A.DENISOV,C.-H.LEE, REMARK 1 AUTH 3 J.R.CORT,G.KOZLOV,J.LIAO,G.FINAK,L.CHEN,D.WISHART,W.LEE, REMARK 1 AUTH 4 L.P.MCINTOSH,K.KALLE GEHRING,M.A.KENNEDY,A.M.EDWARDS, REMARK 1 AUTH 5 C.H.ARROWSMITH REMARK 1 TITL AN NMR APPROACH TO STRUCTURAL PROTEOMICS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 99 1825 2002 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 11854485 REMARK 1 DOI 10.1073/PNAS.042684599 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.84, X-PLOR 3.84 REMARK 3 AUTHORS : BRUNGER (X-PLOR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 326 NOE-DERIVED RESTRAINTS, 66 DIHEDRAL ANGLE RESTRAINTS, 48 REMARK 3 DISTANCE RESTRAINTS REMARK 3 FROM HYDROGEN BONDS. REMARK 4 REMARK 4 1JJG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013843. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 450 MM NACL, 25 MM NA2PO4 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM M156R, U-15N, 13C; 25 MM REMARK 210 PHOSPHATE BUFFER, PH 6.5; 1 MM REMARK 210 M156R, U-15N, 13C; 25 MM REMARK 210 PHOSPHATE BUFFER, PH 6.1; 1 MM REMARK 210 M156R, U-15N; 25 MM PHOSPHATE REMARK 210 BUFFER, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; REMARK 210 4D_13C/15N-SEPARATED_NOESY; HNHA; REMARK 210 2H_EXCHANGE; NH_HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 750 MHZ; 600 MHZ; 500 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 98, VNMR, SPARKY 3.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY AND SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 8 77.75 -156.76 REMARK 500 1 ARG A 11 67.17 -150.56 REMARK 500 1 ASN A 17 87.32 -160.81 REMARK 500 1 LYS A 19 93.89 45.98 REMARK 500 1 THR A 22 72.17 -154.89 REMARK 500 1 ARG A 24 -169.60 61.36 REMARK 500 1 ALA A 27 147.81 74.34 REMARK 500 1 MET A 28 147.70 168.41 REMARK 500 1 ASP A 29 140.12 177.85 REMARK 500 1 LEU A 30 21.93 -151.06 REMARK 500 1 LYS A 43 142.46 -178.95 REMARK 500 1 GLU A 55 96.09 57.87 REMARK 500 1 LEU A 65 -82.54 -77.37 REMARK 500 1 TYR A 67 112.34 -176.84 REMARK 500 1 ARG A 68 143.65 67.08 REMARK 500 1 ASP A 70 49.41 -156.06 REMARK 500 1 LEU A 72 44.79 -157.94 REMARK 500 1 ASP A 73 89.30 -151.71 REMARK 500 1 VAL A 80 160.15 -40.74 REMARK 500 1 ARG A 82 156.64 -37.86 REMARK 500 1 ARG A 90 103.60 178.46 REMARK 500 1 LEU A 94 -57.13 84.39 REMARK 500 2 THR A 2 -54.02 -132.22 REMARK 500 2 LYS A 5 67.15 -172.65 REMARK 500 2 ARG A 9 85.95 -154.93 REMARK 500 2 ARG A 11 -58.69 -179.02 REMARK 500 2 ILE A 18 92.55 -60.64 REMARK 500 2 LYS A 19 -36.54 -170.30 REMARK 500 2 THR A 22 51.33 -169.40 REMARK 500 2 ARG A 24 58.47 -163.05 REMARK 500 2 THR A 25 167.69 -49.93 REMARK 500 2 GLU A 55 84.49 62.53 REMARK 500 2 ASN A 66 78.27 75.07 REMARK 500 2 TYR A 67 177.86 64.00 REMARK 500 2 ARG A 68 -164.49 63.00 REMARK 500 2 GLN A 69 114.37 -177.59 REMARK 500 2 THR A 71 61.33 -156.19 REMARK 500 2 VAL A 80 165.59 -42.98 REMARK 500 2 ARG A 82 156.78 -38.96 REMARK 500 2 ARG A 90 101.87 -179.03 REMARK 500 3 THR A 2 66.74 -163.37 REMARK 500 3 ILE A 4 74.02 40.00 REMARK 500 3 LYS A 5 70.68 -155.10 REMARK 500 3 SER A 7 -45.87 -171.18 REMARK 500 3 SER A 8 86.61 51.29 REMARK 500 3 LYS A 14 69.85 -116.76 REMARK 500 3 LYS A 16 -89.85 -103.32 REMARK 500 3 ASN A 21 87.04 -166.75 REMARK 500 3 ARG A 24 88.81 44.67 REMARK 500 3 ALA A 27 129.51 67.13 REMARK 500 REMARK 500 THIS ENTRY HAS 424 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 9 0.23 SIDE CHAIN REMARK 500 1 ARG A 11 0.30 SIDE CHAIN REMARK 500 1 ARG A 13 0.32 SIDE CHAIN REMARK 500 1 ARG A 24 0.09 SIDE CHAIN REMARK 500 1 ARG A 50 0.18 SIDE CHAIN REMARK 500 1 ARG A 68 0.22 SIDE CHAIN REMARK 500 1 ARG A 74 0.30 SIDE CHAIN REMARK 500 1 ARG A 78 0.27 SIDE CHAIN REMARK 500 1 ARG A 82 0.17 SIDE CHAIN REMARK 500 1 ARG A 87 0.12 SIDE CHAIN REMARK 500 1 ARG A 90 0.28 SIDE CHAIN REMARK 500 1 ARG A 99 0.28 SIDE CHAIN REMARK 500 1 ARG A 100 0.24 SIDE CHAIN REMARK 500 2 ARG A 9 0.31 SIDE CHAIN REMARK 500 2 ARG A 11 0.27 SIDE CHAIN REMARK 500 2 ARG A 13 0.30 SIDE CHAIN REMARK 500 2 ARG A 24 0.31 SIDE CHAIN REMARK 500 2 ARG A 50 0.20 SIDE CHAIN REMARK 500 2 ARG A 68 0.19 SIDE CHAIN REMARK 500 2 ARG A 74 0.30 SIDE CHAIN REMARK 500 2 ARG A 78 0.19 SIDE CHAIN REMARK 500 2 ARG A 82 0.22 SIDE CHAIN REMARK 500 2 ARG A 87 0.25 SIDE CHAIN REMARK 500 2 ARG A 90 0.08 SIDE CHAIN REMARK 500 2 ARG A 99 0.32 SIDE CHAIN REMARK 500 2 ARG A 100 0.14 SIDE CHAIN REMARK 500 3 ARG A 9 0.31 SIDE CHAIN REMARK 500 3 ARG A 11 0.25 SIDE CHAIN REMARK 500 3 ARG A 13 0.26 SIDE CHAIN REMARK 500 3 ARG A 24 0.31 SIDE CHAIN REMARK 500 3 ARG A 50 0.18 SIDE CHAIN REMARK 500 3 ARG A 68 0.32 SIDE CHAIN REMARK 500 3 ARG A 74 0.15 SIDE CHAIN REMARK 500 3 ARG A 78 0.12 SIDE CHAIN REMARK 500 3 ARG A 82 0.32 SIDE CHAIN REMARK 500 3 ARG A 87 0.18 SIDE CHAIN REMARK 500 3 ARG A 90 0.09 SIDE CHAIN REMARK 500 3 ARG A 99 0.32 SIDE CHAIN REMARK 500 3 ARG A 100 0.14 SIDE CHAIN REMARK 500 4 ARG A 9 0.26 SIDE CHAIN REMARK 500 4 ARG A 11 0.32 SIDE CHAIN REMARK 500 4 ARG A 13 0.29 SIDE CHAIN REMARK 500 4 ARG A 24 0.18 SIDE CHAIN REMARK 500 4 ARG A 50 0.25 SIDE CHAIN REMARK 500 4 ARG A 68 0.13 SIDE CHAIN REMARK 500 4 ARG A 74 0.31 SIDE CHAIN REMARK 500 4 ARG A 78 0.23 SIDE CHAIN REMARK 500 4 ARG A 82 0.30 SIDE CHAIN REMARK 500 4 ARG A 87 0.18 SIDE CHAIN REMARK 500 4 ARG A 90 0.22 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 254 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5077 RELATED DB: BMRB REMARK 900 BMRB 5077 IS THE 1H, 13C AND 15N RESONANCE ASSIGNMENTS FOR M156R REMARK 900 RELATED ID: OP2 RELATED DB: TARGETDB DBREF 1JJG A 1 102 UNP Q9Q8E9 Q9Q8E9_9POXV 1 102 SEQRES 1 A 102 MET THR VAL ILE LYS PRO SER SER ARG PRO ARG PRO ARG SEQRES 2 A 102 LYS ASN LYS ASN ILE LYS VAL ASN THR TYR ARG THR SER SEQRES 3 A 102 ALA MET ASP LEU SER PRO GLY SER VAL HIS GLU GLY ILE SEQRES 4 A 102 VAL TYR PHE LYS ASP GLY ILE PHE LYS VAL ARG LEU LEU SEQRES 5 A 102 GLY TYR GLU GLY HIS GLU CYS ILE LEU LEU ASP TYR LEU SEQRES 6 A 102 ASN TYR ARG GLN ASP THR LEU ASP ARG LEU LYS GLU ARG SEQRES 7 A 102 LEU VAL GLY ARG VAL ILE LYS THR ARG VAL VAL ARG ALA SEQRES 8 A 102 ASP GLY LEU TYR VAL ASP LEU ARG ARG PHE PHE HELIX 1 1 ASP A 73 VAL A 80 1 8 SHEET 1 A 6 VAL A 35 LYS A 43 0 SHEET 2 A 6 ILE A 46 ARG A 50 -1 O ILE A 46 N LYS A 43 SHEET 3 A 6 GLU A 58 LEU A 61 -1 N CYS A 59 O VAL A 49 SHEET 4 A 6 TYR A 95 ARG A 99 1 O VAL A 96 N ILE A 60 SHEET 5 A 6 VAL A 83 ALA A 91 -1 O ARG A 87 N ARG A 99 SHEET 6 A 6 VAL A 35 LYS A 43 -1 O HIS A 36 N THR A 86 CRYST1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1