HEADER HYDROLASE 09-JUL-01 1JJW TITLE STRUCTURE OF HAEMOPHILUS INFLUENZAE HSLV PROTEIN AT 1.9 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT PROTEASE HSLV; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.4.99.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: HSLV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSET KEYWDS K ANOMALOUS SCATTERING, QUASI-EQUIVALENT PACKING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.SOUSA,D.B.MCKAY REVDAT 4 16-AUG-23 1JJW 1 REMARK LINK REVDAT 3 13-JUL-11 1JJW 1 VERSN REVDAT 2 24-FEB-09 1JJW 1 VERSN REVDAT 1 05-DEC-01 1JJW 0 JRNL AUTH M.C.SOUSA,D.B.MCKAY JRNL TITL STRUCTURE OF HAEMOPHILUS INFLUENZAE HSLV PROTEIN AT 1.9 A JRNL TITL 2 RESOLUTION, REVEALING A CATION-BINDING SITE NEAR THE JRNL TITL 3 CATALYTIC SITE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 1950 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11717526 JRNL DOI 10.1107/S090744490101575X REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3273928.100 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 88796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 8730 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13221 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1435 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3846 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.82000 REMARK 3 B22 (A**2) : -1.53000 REMARK 3 B33 (A**2) : -1.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.19 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.790 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 42.27 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013859. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JAN-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.55 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46472 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.04900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19500 REMARK 200 R SYM FOR SHELL (I) : 0.19500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1G3K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, HCL TRIS, PEG 400, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.44650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.16550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 63.14400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.44650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.16550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.14400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.44650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.16550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.14400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.44650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.16550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.14400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -39.44650 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -61.16550 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 63.14400 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 39.44650 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 61.16550 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 63.14400 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 39.44650 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -61.16550 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 63.14400 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -39.44650 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 61.16550 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 63.14400 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 126.28800 REMARK 350 BIOMT1 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 126.28800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 174 REMARK 465 ASN B 174 REMARK 465 ASN C 174 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 35 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 MET A 66 CG SD CE REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 ARG B 32 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 35 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 68 CG CD OE1 NE2 REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 GLU B 117 CG CD OE1 OE2 REMARK 470 GLU B 139 CG CD OE1 OE2 REMARK 470 GLU B 142 CG CD OE1 OE2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 MET C 27 CG SD CE REMARK 470 ARG C 62 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 73 CG CD CE NZ REMARK 470 ARG C 86 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 92 CG CD OE1 OE2 REMARK 470 GLU C 100 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 35 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 30.15 -98.28 REMARK 500 ASP A 111 -145.40 51.64 REMARK 500 GLU A 117 -19.40 -48.59 REMARK 500 ASN A 164 -169.84 -111.33 REMARK 500 ASN B 164 -168.77 -112.15 REMARK 500 ASN C 24 25.09 -166.39 REMARK 500 ALA C 93 169.60 177.14 REMARK 500 ASP C 99 -168.47 -128.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 129 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 501 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 157 O REMARK 620 2 CYS A 160 O 91.3 REMARK 620 3 THR A 163 O 84.4 76.3 REMARK 620 4 HOH A 236 O 135.3 118.1 72.2 REMARK 620 5 HOH A 237 O 74.9 164.0 94.0 69.5 REMARK 620 6 HOH A 238 O 74.0 74.3 142.8 142.9 108.6 REMARK 620 7 HOH B 346 O 92.3 127.6 156.1 94.3 62.4 56.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 502 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 269 O REMARK 620 2 HOH A 335 O 48.9 REMARK 620 3 GLY B 157 O 88.9 120.6 REMARK 620 4 CYS B 160 O 138.9 97.6 91.3 REMARK 620 5 THR B 163 O 146.5 153.8 85.0 74.4 REMARK 620 6 HOH B 334 O 90.6 86.4 141.6 113.2 74.6 REMARK 620 7 HOH B 336 O 61.7 103.5 81.8 158.5 84.8 64.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 503 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 157 O REMARK 620 2 CYS C 160 O 86.6 REMARK 620 3 THR C 163 O 88.9 84.3 REMARK 620 4 HOH C 438 O 106.9 103.4 162.6 REMARK 620 5 HOH C 439 O 152.4 111.6 73.3 89.4 REMARK 620 6 HOH C 454 O 74.3 160.9 95.1 82.7 86.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G3K RELATED DB: PDB REMARK 900 NA CONTAINING STRUCTURE DBREF 1JJW A 1 174 UNP P43772 HSLV_HAEIN 1 174 DBREF 1JJW B 1 174 UNP P43772 HSLV_HAEIN 1 174 DBREF 1JJW C 1 174 UNP P43772 HSLV_HAEIN 1 174 SEQRES 1 A 174 THR THR ILE VAL SER VAL ARG ARG ASN GLY GLN VAL VAL SEQRES 2 A 174 VAL GLY GLY ASP GLY GLN VAL SER LEU GLY ASN THR VAL SEQRES 3 A 174 MET LYS GLY ASN ALA ARG LYS VAL ARG ARG LEU TYR ASN SEQRES 4 A 174 GLY LYS VAL LEU ALA GLY PHE ALA GLY GLY THR ALA ASP SEQRES 5 A 174 ALA PHE THR LEU PHE GLU LEU PHE GLU ARG LYS LEU GLU SEQRES 6 A 174 MET HIS GLN GLY HIS LEU LEU LYS SER ALA VAL GLU LEU SEQRES 7 A 174 ALA LYS ASP TRP ARG THR ASP ARG ALA LEU ARG LYS LEU SEQRES 8 A 174 GLU ALA MET LEU ILE VAL ALA ASP GLU LYS GLU SER LEU SEQRES 9 A 174 ILE ILE THR GLY ILE GLY ASP VAL VAL GLN PRO GLU GLU SEQRES 10 A 174 ASP GLN ILE LEU ALA ILE GLY SER GLY GLY ASN TYR ALA SEQRES 11 A 174 LEU SER ALA ALA ARG ALA LEU VAL GLU ASN THR GLU LEU SEQRES 12 A 174 SER ALA HIS GLU ILE VAL GLU LYS SER LEU ARG ILE ALA SEQRES 13 A 174 GLY ASP ILE CYS VAL PHE THR ASN THR ASN PHE THR ILE SEQRES 14 A 174 GLU GLU LEU PRO ASN SEQRES 1 B 174 THR THR ILE VAL SER VAL ARG ARG ASN GLY GLN VAL VAL SEQRES 2 B 174 VAL GLY GLY ASP GLY GLN VAL SER LEU GLY ASN THR VAL SEQRES 3 B 174 MET LYS GLY ASN ALA ARG LYS VAL ARG ARG LEU TYR ASN SEQRES 4 B 174 GLY LYS VAL LEU ALA GLY PHE ALA GLY GLY THR ALA ASP SEQRES 5 B 174 ALA PHE THR LEU PHE GLU LEU PHE GLU ARG LYS LEU GLU SEQRES 6 B 174 MET HIS GLN GLY HIS LEU LEU LYS SER ALA VAL GLU LEU SEQRES 7 B 174 ALA LYS ASP TRP ARG THR ASP ARG ALA LEU ARG LYS LEU SEQRES 8 B 174 GLU ALA MET LEU ILE VAL ALA ASP GLU LYS GLU SER LEU SEQRES 9 B 174 ILE ILE THR GLY ILE GLY ASP VAL VAL GLN PRO GLU GLU SEQRES 10 B 174 ASP GLN ILE LEU ALA ILE GLY SER GLY GLY ASN TYR ALA SEQRES 11 B 174 LEU SER ALA ALA ARG ALA LEU VAL GLU ASN THR GLU LEU SEQRES 12 B 174 SER ALA HIS GLU ILE VAL GLU LYS SER LEU ARG ILE ALA SEQRES 13 B 174 GLY ASP ILE CYS VAL PHE THR ASN THR ASN PHE THR ILE SEQRES 14 B 174 GLU GLU LEU PRO ASN SEQRES 1 C 174 THR THR ILE VAL SER VAL ARG ARG ASN GLY GLN VAL VAL SEQRES 2 C 174 VAL GLY GLY ASP GLY GLN VAL SER LEU GLY ASN THR VAL SEQRES 3 C 174 MET LYS GLY ASN ALA ARG LYS VAL ARG ARG LEU TYR ASN SEQRES 4 C 174 GLY LYS VAL LEU ALA GLY PHE ALA GLY GLY THR ALA ASP SEQRES 5 C 174 ALA PHE THR LEU PHE GLU LEU PHE GLU ARG LYS LEU GLU SEQRES 6 C 174 MET HIS GLN GLY HIS LEU LEU LYS SER ALA VAL GLU LEU SEQRES 7 C 174 ALA LYS ASP TRP ARG THR ASP ARG ALA LEU ARG LYS LEU SEQRES 8 C 174 GLU ALA MET LEU ILE VAL ALA ASP GLU LYS GLU SER LEU SEQRES 9 C 174 ILE ILE THR GLY ILE GLY ASP VAL VAL GLN PRO GLU GLU SEQRES 10 C 174 ASP GLN ILE LEU ALA ILE GLY SER GLY GLY ASN TYR ALA SEQRES 11 C 174 LEU SER ALA ALA ARG ALA LEU VAL GLU ASN THR GLU LEU SEQRES 12 C 174 SER ALA HIS GLU ILE VAL GLU LYS SER LEU ARG ILE ALA SEQRES 13 C 174 GLY ASP ILE CYS VAL PHE THR ASN THR ASN PHE THR ILE SEQRES 14 C 174 GLU GLU LEU PRO ASN HET K A 501 1 HET K B 502 1 HET K C 503 1 HETNAM K POTASSIUM ION FORMUL 4 K 3(K 1+) FORMUL 7 HOH *191(H2 O) HELIX 1 1 GLY A 49 HIS A 67 1 19 HELIX 2 2 HIS A 70 ASP A 85 1 16 HELIX 3 3 ALA A 87 LEU A 91 5 5 HELIX 4 4 GLY A 126 THR A 141 1 16 HELIX 5 5 SER A 144 CYS A 160 1 17 HELIX 6 6 GLY B 49 HIS B 67 1 19 HELIX 7 7 HIS B 70 ASP B 85 1 16 HELIX 8 8 ALA B 87 LEU B 91 5 5 HELIX 9 9 GLY B 126 THR B 141 1 16 HELIX 10 10 SER B 144 ASP B 158 1 15 HELIX 11 11 GLY C 49 HIS C 67 1 19 HELIX 12 12 HIS C 70 ASP C 85 1 16 HELIX 13 13 ALA C 87 LEU C 91 5 5 HELIX 14 14 GLY C 126 THR C 141 1 16 HELIX 15 15 SER C 144 CYS C 160 1 17 SHEET 1 A 4 ILE A 120 ILE A 123 0 SHEET 2 A 4 ILE A 3 ARG A 8 -1 N ILE A 3 O ILE A 123 SHEET 3 A 4 GLN A 11 GLY A 16 -1 O GLN A 11 N ARG A 8 SHEET 4 A 4 THR A 168 LEU A 172 -1 N THR A 168 O GLY A 16 SHEET 1 B 2 VAL A 20 LEU A 22 0 SHEET 2 B 2 THR A 25 LYS A 28 -1 O THR A 25 N LEU A 22 SHEET 1 C 5 VAL A 34 LEU A 37 0 SHEET 2 C 5 VAL A 42 ALA A 47 -1 O VAL A 42 N LEU A 37 SHEET 3 C 5 MET A 94 ALA A 98 -1 O MET A 94 N ALA A 47 SHEET 4 C 5 SER A 103 THR A 107 -1 N LEU A 104 O VAL A 97 SHEET 5 C 5 ASP A 111 VAL A 113 -1 O ASP A 111 N THR A 107 SHEET 1 D 4 ILE B 120 ILE B 123 0 SHEET 2 D 4 ILE B 3 ARG B 8 -1 N ILE B 3 O ILE B 123 SHEET 3 D 4 GLN B 11 GLY B 16 -1 O GLN B 11 N ARG B 8 SHEET 4 D 4 THR B 168 LEU B 172 -1 N THR B 168 O GLY B 16 SHEET 1 E 2 VAL B 20 LEU B 22 0 SHEET 2 E 2 THR B 25 LYS B 28 -1 O THR B 25 N LEU B 22 SHEET 1 F 5 VAL B 34 LEU B 37 0 SHEET 2 F 5 VAL B 42 ALA B 47 -1 O VAL B 42 N LEU B 37 SHEET 3 F 5 MET B 94 ALA B 98 -1 O MET B 94 N ALA B 47 SHEET 4 F 5 SER B 103 THR B 107 -1 N LEU B 104 O VAL B 97 SHEET 5 F 5 VAL B 112 VAL B 113 -1 N VAL B 113 O ILE B 105 SHEET 1 G 4 ILE C 120 ILE C 123 0 SHEET 2 G 4 ILE C 3 ARG C 8 -1 O ILE C 3 N ILE C 123 SHEET 3 G 4 GLN C 11 GLY C 16 -1 O GLN C 11 N ARG C 8 SHEET 4 G 4 THR C 168 LEU C 172 -1 N THR C 168 O GLY C 16 SHEET 1 H 2 VAL C 20 LEU C 22 0 SHEET 2 H 2 THR C 25 LYS C 28 -1 O THR C 25 N LEU C 22 SHEET 1 I 5 VAL C 34 LEU C 37 0 SHEET 2 I 5 VAL C 42 GLY C 48 -1 O VAL C 42 N LEU C 37 SHEET 3 I 5 ALA C 93 ALA C 98 -1 O MET C 94 N ALA C 47 SHEET 4 I 5 SER C 103 THR C 107 -1 N LEU C 104 O VAL C 97 SHEET 5 I 5 VAL C 112 VAL C 113 -1 N VAL C 113 O ILE C 105 LINK O GLY A 157 K K A 501 1555 1555 2.59 LINK O CYS A 160 K K A 501 1555 1555 2.65 LINK O THR A 163 K K A 501 1555 1555 2.59 LINK O HOH A 236 K K A 501 1555 1555 2.97 LINK O HOH A 237 K K A 501 1555 1555 2.76 LINK O HOH A 238 K K A 501 1555 1555 2.53 LINK O HOH A 269 K K B 502 3556 1555 3.11 LINK O HOH A 335 K K B 502 3556 1555 2.69 LINK K K A 501 O HOH B 346 1555 3556 3.09 LINK O GLY B 157 K K B 502 1555 1555 2.57 LINK O CYS B 160 K K B 502 1555 1555 2.72 LINK O THR B 163 K K B 502 1555 1555 2.54 LINK O HOH B 334 K K B 502 1555 1555 2.52 LINK O HOH B 336 K K B 502 1555 1555 3.09 LINK O GLY C 157 K K C 503 1555 1555 2.62 LINK O CYS C 160 K K C 503 1555 1555 2.72 LINK O THR C 163 K K C 503 1555 1555 2.69 LINK O HOH C 438 K K C 503 2665 1555 2.67 LINK O HOH C 439 K K C 503 1555 1555 2.91 LINK O HOH C 454 K K C 503 1555 1555 2.80 CISPEP 1 LEU B 172 PRO B 173 0 0.43 SITE 1 AC1 7 GLY A 157 CYS A 160 THR A 163 HOH A 236 SITE 2 AC1 7 HOH A 237 HOH A 238 HOH B 346 SITE 1 AC2 6 HOH A 335 GLY B 157 CYS B 160 THR B 163 SITE 2 AC2 6 HOH B 334 HOH B 336 SITE 1 AC3 6 GLY C 157 CYS C 160 THR C 163 HOH C 438 SITE 2 AC3 6 HOH C 439 HOH C 454 CRYST1 78.893 122.331 126.288 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012675 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007918 0.00000