HEADER IMMUNE SYSTEM 03-AUG-01 1JPS TITLE CRYSTAL STRUCTURE OF TISSUE FACTOR IN COMPLEX WITH HUMANIZED FAB D3H44 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN FAB D3H44, LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: FAB FRAGMENT; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: IMMUNOGLOBULIN FAB D3H44, HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: FAB FRAGMENT; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TISSUE FACTOR; COMPND 13 CHAIN: T; COMPND 14 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEMX1; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PEMX1; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PEMX1 KEYWDS ANTIGEN-ANTIBODY RECOGNITION, HUMANIZED ANTIBODY, BLOOD COAGULATION, KEYWDS 2 INTERFACE WATER MOLECULES, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.FAELBER,D.KIRCHHOFER,L.PRESTA,R.F.KELLEY,Y.A.MULLER REVDAT 6 06-NOV-24 1JPS 1 REMARK REVDAT 5 25-OCT-23 1JPS 1 REMARK REVDAT 4 04-OCT-17 1JPS 1 REMARK REVDAT 3 24-FEB-09 1JPS 1 VERSN REVDAT 2 18-DEC-02 1JPS 1 REMARK REVDAT 1 03-FEB-02 1JPS 0 JRNL AUTH K.FAELBER,D.KIRCHHOFER,L.PRESTA,R.F.KELLEY,Y.A.MULLER JRNL TITL THE 1.85 A RESOLUTION CRYSTAL STRUCTURES OF TISSUE FACTOR IN JRNL TITL 2 COMPLEX WITH HUMANIZED FAB D3H44 AND OF FREE HUMANIZED FAB JRNL TITL 3 D3H44: REVISITING THE SOLVATION OF ANTIGEN COMBINING SITES. JRNL REF J.MOL.BIOL. V. 313 83 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11601848 JRNL DOI 10.1006/JMBI.2001.5036 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.PRESTA,P.SIMS,Y.G.MENG,P.MORAN,S.BULLENS,S.BUNTING, REMARK 1 AUTH 2 J.SCHOENFELD,D.LOWE,J.LAI,P.RANCATORE,M.IVERSON,A.LIM, REMARK 1 AUTH 3 V.CHISHOLM,R.F.KELLEY,M.RIEDERER,D.KIRCHHOFER REMARK 1 TITL GENERATION OF A HUMANIZED, HIGH AFFINITY ANTI-TISSUE FACTOR REMARK 1 TITL 2 ANTIBODY FOR USE AS A NOVEL ANTITHROMBOTIC THERAPEUTIC REMARK 1 REF THROMB.HAEMOST. V. 85 379 2001 REMARK 1 REFN ISSN 0340-6245 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.A.MULLER,M.H.ULTSCH,A.M.DE VOS REMARK 1 TITL THE CRYSTAL STRUCTURE OF THE EXTRACELLULARE DOMAIN OF HUMAN REMARK 1 TITL 2 TISSUE FACTOR REFINED TO 1.7 A RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 256 144 1996 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1996.0073 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 73054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.221 REMARK 3 FREE R VALUE TEST SET COUNT : 5275 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 850 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4858 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 579 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.35200 REMARK 3 B22 (A**2) : 3.94000 REMARK 3 B33 (A**2) : 0.41300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.640 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000014044. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8428 REMARK 200 MONOCHROMATOR : TRIANGULAR MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73056 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27000 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1AHW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, SODIUM CHLORIDE, SODIUM REMARK 280 -HEPES BUFFER, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.12500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.00500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.00500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.12500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS L 214 REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 LYS H 218 REMARK 465 SER H 219 REMARK 465 CYS H 220 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 THR H 223 REMARK 465 HIS H 224 REMARK 465 THR H 225 REMARK 465 SER T 1 REMARK 465 GLY T 2 REMARK 465 THR T 3 REMARK 465 THR T 4 REMARK 465 GLU T 84 REMARK 465 SER T 85 REMARK 465 THR T 86 REMARK 465 GLY T 87 REMARK 465 SER T 88 REMARK 465 ALA T 89 REMARK 465 GLY T 90 REMARK 465 GLN T 212 REMARK 465 GLU T 213 REMARK 465 LYS T 214 REMARK 465 GLY T 215 REMARK 465 GLU T 216 REMARK 465 PHE T 217 REMARK 465 ARG T 218 REMARK 465 GLU T 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS L 23 CA - CB - SG ANGL. DEV. = 8.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA L 51 -43.07 70.69 REMARK 500 ALA L 84 176.25 177.91 REMARK 500 ASN L 138 70.38 46.47 REMARK 500 ASN L 152 -7.32 69.96 REMARK 500 ALA H 101 -16.05 91.89 REMARK 500 ASP H 148 71.06 58.83 REMARK 500 PHE T 19 -12.79 79.27 REMARK 500 LYS T 41 -155.18 -148.29 REMARK 500 TYR T 51 58.34 36.88 REMARK 500 ASP T 66 94.71 -164.53 REMARK 500 ALA T 80 -179.04 -69.55 REMARK 500 ASN T 82 105.48 -165.76 REMARK 500 PHE T 116 59.45 -144.45 REMARK 500 SER T 161 47.72 -98.11 REMARK 500 SER T 163 -63.76 -94.85 REMARK 500 THR T 172 -157.70 -120.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR L 140 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JPT RELATED DB: PDB REMARK 900 1JPT CONTAINS CRYSTAL STRUCTURE OF D3H44 REMARK 900 RELATED ID: 2HFT RELATED DB: PDB REMARK 900 2HFT CONTAINS CRYSTAL STRUCTURE OF TISSUE FACTOR DBREF 1JPS T 1 219 UNP P13726 TF_HUMAN 33 251 DBREF 1JPS L 1 214 PDB 1JPS 1JPS 1 214 DBREF 1JPS H 1 225 PDB 1JPS 1JPS 1 225 SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 ARG ASP ILE LYS SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS VAL LEU ILE TYR TYR ALA THR SEQRES 5 L 214 SER LEU ALA GLU GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS LEU GLN HIS SEQRES 8 L 214 GLY GLU SER PRO TRP THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 H 225 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 225 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 225 PHE ASN ILE LYS GLU TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 225 ALA PRO GLY LYS GLY LEU GLU TRP VAL GLY LEU ILE ASP SEQRES 5 H 225 PRO GLU GLN GLY ASN THR ILE TYR ASP PRO LYS PHE GLN SEQRES 6 H 225 ASP ARG ALA THR ILE SER ALA ASP ASN SER LYS ASN THR SEQRES 7 H 225 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 225 ALA VAL TYR TYR CYS ALA ARG ASP THR ALA ALA TYR PHE SEQRES 9 H 225 ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER SEQRES 10 H 225 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 225 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 225 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 225 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 225 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 225 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 225 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 225 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 225 LYS THR HIS THR SEQRES 1 T 219 SER GLY THR THR ASN THR VAL ALA ALA TYR ASN LEU THR SEQRES 2 T 219 TRP LYS SER THR ASN PHE LYS THR ILE LEU GLU TRP GLU SEQRES 3 T 219 PRO LYS PRO VAL ASN GLN VAL TYR THR VAL GLN ILE SER SEQRES 4 T 219 THR LYS SER GLY ASP TRP LYS SER LYS CYS PHE TYR THR SEQRES 5 T 219 THR ASP THR GLU CYS ASP LEU THR ASP GLU ILE VAL LYS SEQRES 6 T 219 ASP VAL LYS GLN THR TYR LEU ALA ARG VAL PHE SER TYR SEQRES 7 T 219 PRO ALA GLY ASN VAL GLU SER THR GLY SER ALA GLY GLU SEQRES 8 T 219 PRO LEU TYR GLU ASN SER PRO GLU PHE THR PRO TYR LEU SEQRES 9 T 219 GLU THR ASN LEU GLY GLN PRO THR ILE GLN SER PHE GLU SEQRES 10 T 219 GLN VAL GLY THR LYS VAL ASN VAL THR VAL GLU ASP GLU SEQRES 11 T 219 ARG THR LEU VAL ARG ARG ASN ASN THR PHE LEU SER LEU SEQRES 12 T 219 ARG ASP VAL PHE GLY LYS ASP LEU ILE TYR THR LEU TYR SEQRES 13 T 219 TYR TRP LYS SER SER SER SER GLY LYS LYS THR ALA LYS SEQRES 14 T 219 THR ASN THR ASN GLU PHE LEU ILE ASP VAL ASP LYS GLY SEQRES 15 T 219 GLU ASN TYR CYS PHE SER VAL GLN ALA VAL ILE PRO SER SEQRES 16 T 219 ARG THR VAL ASN ARG LYS SER THR ASP SER PRO VAL GLU SEQRES 17 T 219 CYS MET GLY GLN GLU LYS GLY GLU PHE ARG GLU FORMUL 4 HOH *579(H2 O) HELIX 1 1 GLN L 79 PHE L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 GLU L 187 1 5 HELIX 4 4 ASN H 28 TYR H 32 5 5 HELIX 5 5 ARG H 87 THR H 91 5 5 HELIX 6 6 SER H 160 ALA H 162 5 3 HELIX 7 7 SER H 191 LEU H 193 5 3 HELIX 8 8 LYS H 205 ASN H 208 5 4 HELIX 9 9 LEU T 59 VAL T 64 1 6 HELIX 10 10 THR T 101 THR T 106 1 6 HELIX 11 11 LEU T 143 GLY T 148 1 6 HELIX 12 12 LYS T 149 LEU T 151 5 3 SHEET 1 A 4 MET L 4 SER L 7 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 N THR L 22 O SER L 7 SHEET 3 A 4 ASP L 70 ILE L 75 -1 N TYR L 71 O CYS L 23 SHEET 4 A 4 PHE L 62 SER L 67 -1 O SER L 63 N THR L 74 SHEET 1 B 8 SER L 10 SER L 14 0 SHEET 2 B 8 THR L 102 LYS L 107 1 O LYS L 103 N LEU L 11 SHEET 3 B 8 ALA L 84 GLN L 90 -1 O ALA L 84 N VAL L 104 SHEET 4 B 8 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 5 B 8 ALA L 84 GLN L 90 -1 N GLN L 90 O THR L 97 SHEET 6 B 8 LEU L 33 GLN L 38 -1 N ASN L 34 O LEU L 89 SHEET 7 B 8 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 8 B 8 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 C 4 SER L 114 PHE L 118 0 SHEET 2 C 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 C 4 TYR L 173 SER L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 C 4 SER L 159 VAL L 163 -1 O GLN L 160 N THR L 178 SHEET 1 D 4 ALA L 153 LEU L 154 0 SHEET 2 D 4 LYS L 145 VAL L 150 -1 O VAL L 150 N ALA L 153 SHEET 3 D 4 VAL L 191 THR L 197 -1 N ALA L 193 O LYS L 149 SHEET 4 D 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 E 4 GLN H 3 SER H 7 0 SHEET 2 E 4 LEU H 18 SER H 25 -1 N SER H 21 O SER H 7 SHEET 3 E 4 THR H 78 MET H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 E 4 ALA H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 F 8 GLY H 10 VAL H 12 0 SHEET 2 F 8 THR H 111 VAL H 115 1 O LEU H 112 N GLY H 10 SHEET 3 F 8 ALA H 92 ASP H 99 -1 O ALA H 92 N VAL H 113 SHEET 4 F 8 PHE H 104 TRP H 107 -1 N ASP H 105 O ARG H 98 SHEET 5 F 8 ALA H 92 ASP H 99 -1 N ARG H 98 O TYR H 106 SHEET 6 F 8 TYR H 33 GLN H 39 -1 O TYR H 33 N ASP H 99 SHEET 7 F 8 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 8 F 8 THR H 58 TYR H 60 -1 N ILE H 59 O LEU H 50 SHEET 1 G 6 SER H 124 LEU H 128 0 SHEET 2 G 6 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 128 SHEET 3 G 6 TYR H 180 PRO H 189 -1 N TYR H 180 O TYR H 149 SHEET 4 G 6 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 5 G 6 TYR H 180 PRO H 189 -1 N VAL H 185 O HIS H 168 SHEET 6 G 6 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 H 3 THR H 155 TRP H 158 0 SHEET 2 H 3 ILE H 199 HIS H 204 -1 N ASN H 201 O SER H 157 SHEET 3 H 3 THR H 209 LYS H 214 -1 O THR H 209 N HIS H 204 SHEET 1 I 3 TYR T 10 THR T 17 0 SHEET 2 I 3 LYS T 20 GLU T 26 -1 N LYS T 20 O THR T 17 SHEET 3 I 3 GLU T 56 ASP T 58 -1 O CYS T 57 N LEU T 23 SHEET 1 J 4 LYS T 46 THR T 52 0 SHEET 2 J 4 GLN T 32 SER T 39 -1 N TYR T 34 O THR T 52 SHEET 3 J 4 LEU T 72 PRO T 79 -1 N LEU T 72 O SER T 39 SHEET 4 J 4 LEU T 93 ASN T 96 -1 O LEU T 93 N SER T 77 SHEET 1 K 3 ILE T 113 VAL T 119 0 SHEET 2 K 3 LYS T 122 VAL T 127 -1 O LYS T 122 N VAL T 119 SHEET 3 K 3 GLU T 174 ASP T 178 -1 O PHE T 175 N VAL T 125 SHEET 1 L 2 ARG T 131 ARG T 135 0 SHEET 2 L 2 PHE T 140 SER T 142 -1 N LEU T 141 O VAL T 134 SHEET 1 M 4 LYS T 166 THR T 170 0 SHEET 2 M 4 ILE T 152 LYS T 159 -1 N TYR T 153 O THR T 170 SHEET 3 M 4 TYR T 185 VAL T 192 -1 N CYS T 186 O TRP T 158 SHEET 4 M 4 GLU T 208 CYS T 209 -1 O GLU T 208 N PHE T 187 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.10 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.06 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 4 CYS H 144 CYS H 200 1555 1555 2.04 SSBOND 5 CYS T 49 CYS T 57 1555 1555 2.07 SSBOND 6 CYS T 186 CYS T 209 1555 1555 2.05 CISPEP 1 SER L 7 PRO L 8 0 -0.24 CISPEP 2 SER L 94 PRO L 95 0 -0.48 CISPEP 3 TYR L 140 PRO L 141 0 0.20 CISPEP 4 PHE H 150 PRO H 151 0 -0.35 CISPEP 5 GLU H 152 PRO H 153 0 0.10 CISPEP 6 GLU T 26 PRO T 27 0 -0.22 CRYST1 84.250 93.280 110.010 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011869 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010720 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009090 0.00000