HEADER TRANSCRIPTION 22-AUG-01 1JTY TITLE CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REGULATOR TITLE 2 QACR BOUND TO ETHIDIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION; COMPND 3 CHAIN: B, D, A, E; COMPND 4 SYNONYM: QACR REPRESSOR, ORF 188; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: DH5A; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PSK5210 KEYWDS MULTIDRUG BINDING, MULTIDRUG RECOGNITION MECHANISM, CATIONIC KEYWDS 2 LIPOPHILIC DRUGS, QACR, QACA, REPRESSOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER,M.C.MILLER,S.GRKOVIC,M.H.BROWN,R.A.SKURRAY,R.G.BRENNAN REVDAT 5 16-AUG-23 1JTY 1 REMARK REVDAT 4 27-OCT-21 1JTY 1 REMARK SEQADV REVDAT 3 30-JUN-09 1JTY 1 REMARK REVDAT 2 24-FEB-09 1JTY 1 VERSN REVDAT 1 12-DEC-01 1JTY 0 JRNL AUTH M.A.SCHUMACHER,M.C.MILLER,S.GRKOVIC,M.H.BROWN,R.A.SKURRAY, JRNL AUTH 2 R.G.BRENNAN JRNL TITL STRUCTURAL MECHANISMS OF QACR INDUCTION AND MULTIDRUG JRNL TITL 2 RECOGNITION. JRNL REF SCIENCE V. 294 2158 2001 JRNL REFN ISSN 0036-8075 JRNL PMID 11739955 JRNL DOI 10.1126/SCIENCE.1066020 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 15486414.380 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 73.6 REMARK 3 NUMBER OF REFLECTIONS : 22060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2192 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2988 REMARK 3 BIN R VALUE (WORKING SET) : 0.4400 REMARK 3 BIN FREE R VALUE : 0.4540 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 367 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.024 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 109 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.70000 REMARK 3 B22 (A**2) : 2.70000 REMARK 3 B33 (A**2) : -5.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.63 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.52 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.77 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 73.02 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : ETBR.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : ETBR.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JTY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-01. REMARK 100 THE DEPOSITION ID IS D_1000014181. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22060 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 83.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.22900 REMARK 200 R SYM FOR SHELL (I) : 0.22900 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1JUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 86.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 86.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.50000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 86.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 86.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.50000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 86.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 86.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.50000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 86.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 86.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.50000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: QACR IS A DIMER THAT BINDS ONE DRUG PER DIMER. IN THE REMARK 300 CRYSTAL THERE IS A DRUG-FREE DIMER AND DRUG-BOUND DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 LYS B 188 REMARK 465 HIS B 189 REMARK 465 HIS B 190 REMARK 465 HIS B 191 REMARK 465 HIS B 192 REMARK 465 HIS B 193 REMARK 465 HIS B 194 REMARK 465 MET D 1 REMARK 465 LYS D 188 REMARK 465 HIS D 189 REMARK 465 HIS D 190 REMARK 465 HIS D 191 REMARK 465 HIS D 192 REMARK 465 HIS D 193 REMARK 465 HIS D 194 REMARK 465 MET A 1 REMARK 465 LYS A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 MET E 1 REMARK 465 LYS E 188 REMARK 465 HIS E 189 REMARK 465 HIS E 190 REMARK 465 HIS E 191 REMARK 465 HIS E 192 REMARK 465 HIS E 193 REMARK 465 HIS E 194 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 21 OE1 GLU B 105 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER D 187 N SER D 187 CA 0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER D 187 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 3 -97.85 -57.98 REMARK 500 VAL B 10 -70.16 -75.20 REMARK 500 TYR B 20 -74.98 -78.29 REMARK 500 LYS B 30 -76.52 -62.70 REMARK 500 GLU B 33 51.59 76.89 REMARK 500 LYS B 36 26.93 -64.99 REMARK 500 TYR B 41 -95.86 -46.79 REMARK 500 LEU B 54 -76.88 -50.21 REMARK 500 LYS B 67 22.60 -62.35 REMARK 500 GLU B 68 -35.32 -142.66 REMARK 500 LYS B 73 -87.15 -82.69 REMARK 500 TYR B 92 -70.40 64.28 REMARK 500 PRO B 94 26.98 -65.45 REMARK 500 LEU B 95 40.63 -171.59 REMARK 500 THR B 104 -65.74 -99.30 REMARK 500 GLU B 105 -14.67 -46.83 REMARK 500 ASN B 110 81.73 -43.70 REMARK 500 SER B 111 -40.11 -139.47 REMARK 500 GLU B 114 -101.10 -74.79 REMARK 500 VAL B 129 -72.45 -55.61 REMARK 500 LEU B 136 -70.77 -56.04 REMARK 500 ASN B 137 -8.35 -56.07 REMARK 500 TRP B 140 -165.30 -170.32 REMARK 500 SER B 141 112.19 -166.17 REMARK 500 ASP B 144 34.53 -176.39 REMARK 500 VAL B 145 -28.64 -31.27 REMARK 500 HIS B 164 -2.51 -56.78 REMARK 500 ASN B 167 156.28 -45.84 REMARK 500 PHE B 178 -71.17 -67.14 REMARK 500 LEU D 8 -36.48 -36.16 REMARK 500 ASN D 18 -24.36 -145.56 REMARK 500 VAL D 29 -76.97 -58.78 REMARK 500 SER D 34 -157.83 -138.07 REMARK 500 LYS D 44 -73.27 -42.36 REMARK 500 LYS D 66 -75.17 -57.61 REMARK 500 LYS D 71 8.40 -45.24 REMARK 500 LYS D 73 -72.26 -75.33 REMARK 500 TYR D 92 -74.54 60.14 REMARK 500 TYR D 93 -33.17 -36.81 REMARK 500 GLU D 105 35.04 -95.25 REMARK 500 TYR D 106 2.33 -164.76 REMARK 500 LYS D 108 -92.98 -51.42 REMARK 500 THR D 109 97.34 -31.08 REMARK 500 GLU D 120 -9.29 -53.27 REMARK 500 ALA D 126 -18.37 -47.17 REMARK 500 LYS D 132 -74.25 -68.60 REMARK 500 LEU D 136 2.43 -68.15 REMARK 500 HIS D 164 -54.31 -19.19 REMARK 500 ASN D 167 109.92 -46.58 REMARK 500 ASN A 18 16.84 -146.11 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ET A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 899 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 699 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 999 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 399 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 799 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JT0 RELATED DB: PDB REMARK 900 QACR-DNA COMPLEX REMARK 900 RELATED ID: 1JT6 RELATED DB: PDB REMARK 900 QACR-DEQUALINIUM COMPLEX REMARK 900 RELATED ID: 1JTX RELATED DB: PDB REMARK 900 QACR-CRYSTAL VIOLET COMPLEX REMARK 900 RELATED ID: 1JUM RELATED DB: PDB REMARK 900 QACR-BERBERINE COMPLEX REMARK 900 RELATED ID: 1JUP RELATED DB: PDB REMARK 900 QACR-MALCHITE GREEN COMPLEX REMARK 900 RELATED ID: 1JUS RELATED DB: PDB REMARK 900 QACR-RHODAMINE 6G COMPLEX DBREF 1JTY B 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1JTY D 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1JTY A 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1JTY E 1 188 UNP P0A0N4 QACR_STAAU 1 188 SEQADV 1JTY ALA B 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1JTY SER B 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1JTY HIS B 189 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS B 190 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS B 191 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS B 192 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS B 193 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS B 194 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY ALA D 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1JTY SER D 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1JTY HIS D 189 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS D 190 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS D 191 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS D 192 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS D 193 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS D 194 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY ALA A 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1JTY SER A 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1JTY HIS A 189 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS A 190 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS A 191 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS A 192 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS A 193 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS A 194 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY ALA E 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1JTY SER E 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1JTY HIS E 189 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS E 190 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS E 191 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS E 192 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS E 193 UNP P0A0N4 EXPRESSION TAG SEQADV 1JTY HIS E 194 UNP P0A0N4 EXPRESSION TAG SEQRES 1 B 194 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 B 194 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 B 194 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 B 194 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 B 194 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 B 194 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 B 194 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 B 194 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 B 194 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 B 194 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 B 194 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 B 194 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 B 194 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 B 194 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 B 194 LEU ASN GLY LEU SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 D 194 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 D 194 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 D 194 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 D 194 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 D 194 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 D 194 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 D 194 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 D 194 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 D 194 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 D 194 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 D 194 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 D 194 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 D 194 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 D 194 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 D 194 LEU ASN GLY LEU SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 A 194 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 A 194 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 A 194 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 A 194 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 A 194 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 A 194 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 A 194 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 A 194 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 A 194 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 A 194 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 A 194 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 A 194 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 A 194 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 A 194 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 A 194 LEU ASN GLY LEU SER LYS HIS HIS HIS HIS HIS HIS SEQRES 1 E 194 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 E 194 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 E 194 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 E 194 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 E 194 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 E 194 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 E 194 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 E 194 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 E 194 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 E 194 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 E 194 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 E 194 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 E 194 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 E 194 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 E 194 LEU ASN GLY LEU SER LYS HIS HIS HIS HIS HIS HIS HET SO4 B 195 5 HET SO4 B 199 5 HET SO4 B1000 5 HET SO4 D 195 5 HET SO4 D 999 5 HET ET A 205 24 HET SO4 A 299 5 HET SO4 A 699 5 HET SO4 A 799 5 HET SO4 A 499 5 HET SO4 A 800 5 HET SO4 A 801 5 HET SO4 A 802 5 HET SO4 E 899 5 HET SO4 E 900 5 HET SO4 E 399 5 HET SO4 E 901 5 HET SO4 E 902 5 HETNAM SO4 SULFATE ION HETNAM ET ETHIDIUM FORMUL 5 SO4 17(O4 S 2-) FORMUL 10 ET C21 H20 N3 1+ FORMUL 23 HOH *46(H2 O) HELIX 1 1 ASN B 2 ILE B 7 1 6 HELIX 2 2 ILE B 7 ASN B 18 1 12 HELIX 3 3 THR B 24 GLU B 33 1 10 HELIX 4 4 GLY B 37 PHE B 43 1 7 HELIX 5 5 THR B 45 ILE B 70 1 26 HELIX 6 6 THR B 74 THR B 89 1 16 HELIX 7 7 TYR B 92 PRO B 94 5 3 HELIX 8 8 LEU B 95 TYR B 106 1 12 HELIX 9 9 LYS B 115 TYR B 123 1 9 HELIX 10 10 ILE B 124 ASN B 137 1 14 HELIX 11 11 ASP B 144 PHE B 162 1 19 HELIX 12 12 ASN B 167 SER B 187 1 21 HELIX 13 13 ASN D 2 LYS D 17 1 16 HELIX 14 14 THR D 24 SER D 32 1 9 HELIX 15 15 SER D 35 PHE D 43 1 9 HELIX 16 16 THR D 45 GLU D 68 1 24 HELIX 17 17 THR D 74 THR D 89 1 16 HELIX 18 18 TYR D 92 PRO D 94 5 3 HELIX 19 19 LEU D 95 GLU D 105 1 11 HELIX 20 20 THR D 109 LEU D 136 1 28 HELIX 21 21 ASP D 144 THR D 163 1 20 HELIX 22 22 ASN D 167 GLY D 185 1 19 HELIX 23 23 ASN A 2 GLY A 19 1 18 HELIX 24 24 THR A 24 SER A 32 1 9 HELIX 25 25 SER A 35 LYS A 44 1 10 HELIX 26 26 THR A 45 GLU A 68 1 24 HELIX 27 27 THR A 74 GLU A 90 1 17 HELIX 28 28 LEU A 95 TYR A 106 1 12 HELIX 29 29 SER A 111 ASN A 137 1 27 HELIX 30 30 ASP A 144 THR A 163 1 20 HELIX 31 31 ASN A 167 ASN A 184 1 18 HELIX 32 32 ASN E 2 GLY E 19 1 18 HELIX 33 33 THR E 24 SER E 32 1 9 HELIX 34 34 SER E 35 PHE E 43 1 9 HELIX 35 35 THR E 45 GLN E 69 1 25 HELIX 36 36 ILE E 70 ALA E 72 5 3 HELIX 37 37 THR E 74 THR E 89 1 16 HELIX 38 38 LEU E 95 TYR E 107 1 13 HELIX 39 39 ASN E 110 ILE E 112 5 3 HELIX 40 40 ASN E 113 ASN E 137 1 25 HELIX 41 41 ASP E 144 PHE E 162 1 19 HELIX 42 42 ASN E 167 GLY E 185 1 19 SITE 1 AC1 8 GLN A 96 ILE A 99 ILE A 100 TYR A 103 SITE 2 AC1 8 GLU A 120 TYR A 123 ASN A 157 PHE B 162 SITE 1 AC2 3 LYS A 4 TYR A 41 HIS A 42 SITE 1 AC3 5 TYR E 20 LYS E 46 GLU E 47 GLU E 105 SITE 2 AC3 5 TYR E 106 SITE 1 AC4 3 THR D 24 GLY D 26 GLU D 27 SITE 1 AC5 5 LYS E 36 TYR E 40 THR E 45 LYS E 46 SITE 2 AC5 5 GLU E 47 SITE 1 AC6 3 THR A 24 GLY A 26 HOH A 811 SITE 1 AC7 3 ASN D 2 ASP D 5 LYS D 6 SITE 1 AC8 3 HIS B 128 LYS B 132 TYR D 41 SITE 1 AC9 4 LYS E 12 ILE E 56 GLU E 57 LYS E 60 SITE 1 BC1 5 THR A 25 LEU A 39 TYR A 40 LYS A 44 SITE 2 BC1 5 THR A 45 SITE 1 BC2 2 LYS E 4 HIS E 42 SITE 1 BC3 3 LYS B 60 TYR B 91 LYS D 67 SITE 1 BC4 4 ILE A 142 ASN A 143 ASP A 144 LYS B 177 SITE 1 BC5 5 GLN B 64 LYS B 67 TYR B 91 GLU D 90 SITE 2 BC5 5 TYR D 91 SITE 1 BC6 3 HIS A 128 VAL A 145 ASN A 146 SITE 1 BC7 3 LEU A 3 LYS A 4 HIS A 42 SITE 1 BC8 3 HIS E 128 LYS E 132 HOH E 913 SITE 1 BC9 4 SER A 35 LYS A 36 LYS E 60 TYR E 91 CRYST1 172.000 172.000 95.000 90.00 90.00 90.00 P 42 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005814 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005814 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010526 0.00000