HEADER METAL BINDING PROTEIN 02-SEP-01 1JW1 TITLE CRYSTALLIZATION AND STRUCTURE DETERMINATION OF GOAT TITLE 2 LACTOFERRIN AT 4.0 RESOLUTION: A NEW FORM OF PACKING IN TITLE 3 LACTOFERRINS WITH A HIGH SOLVENT CONTENT IN CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACTOFERRIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAPRA HIRCUS; SOURCE 3 ORGANISM_COMMON: GOAT; SOURCE 4 ORGANISM_TAXID: 9925 KEYWDS GOAT LACTOFERRIN, X-RAY DIFFRACTION, HIGH SOLVENT CONTENT, KEYWDS 2 METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.KUMAR,S.YADAV,T.P.SINGH REVDAT 2 24-FEB-09 1JW1 1 VERSN REVDAT 1 29-APR-03 1JW1 0 JRNL AUTH P.KUMAR,S.YADAV,T.P.SINGH JRNL TITL CRYSTALLIZATION AND STRUCTURE DETERMONATION OF JRNL TITL 2 GOAT LACTOFERRIN AT 4.0A RESOLUTION: A NEW FORM OF JRNL TITL 3 PACKING IN LACTOFERRINS WITH A HIGH SOLVENT JRNL TITL 4 CONTENT IN CRYSTALS JRNL REF INDIAN J.BIOCHEM.BIOPHYS. V. 39 16 2002 JRNL REFN ISSN 0301-1208 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 103755.160 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.0 REMARK 3 NUMBER OF REFLECTIONS : 17327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 841 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.24 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2460 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 124 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5293 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.96000 REMARK 3 B22 (A**2) : 3.13000 REMARK 3 B33 (A**2) : -2.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.79 REMARK 3 ESD FROM SIGMAA (A) : 0.27 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.84 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.87 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.49 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 1.49 REMARK 3 BSOL : 300.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JW1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-OCT-01. REMARK 100 THE RCSB ID CODE IS RCSB014249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-98 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15870 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ETHANOL, PH 8.0, MICRODIALYSIS, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.30000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.52500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 76.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.52500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.30000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 76.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 347 CB TRP A 347 CG 0.144 REMARK 500 ARG A 463 N ARG A 463 CA 0.141 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 13 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 LEU A 29 CA - CB - CG ANGL. DEV. = 16.9 DEGREES REMARK 500 LEU A 43 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 LEU A 59 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 MET A 117 CB - CG - SD ANGL. DEV. = -20.5 DEGREES REMARK 500 PRO A 128 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 LEU A 230 CA - CB - CG ANGL. DEV. = 16.1 DEGREES REMARK 500 ARG A 272 CB - CA - C ANGL. DEV. = -12.0 DEGREES REMARK 500 ARG A 272 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG A 272 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 GLN A 284 N - CA - C ANGL. DEV. = 21.8 DEGREES REMARK 500 THR A 376 N - CA - C ANGL. DEV. = -16.5 DEGREES REMARK 500 LEU A 394 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 ASP A 395 N - CA - CB ANGL. DEV. = -11.3 DEGREES REMARK 500 ASP A 395 CB - CG - OD2 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 462 CA - C - O ANGL. DEV. = -16.8 DEGREES REMARK 500 ARG A 463 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 ARG A 463 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 463 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 462 CA - C - N ANGL. DEV. = -17.8 DEGREES REMARK 500 ASP A 462 O - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 SER A 557 CA - C - N ANGL. DEV. = -20.2 DEGREES REMARK 500 SER A 557 O - C - N ANGL. DEV. = 9.8 DEGREES REMARK 500 LEU A 617 CA - CB - CG ANGL. DEV. = 19.1 DEGREES REMARK 500 LEU A 640 CA - CB - CG ANGL. DEV. = 19.5 DEGREES REMARK 500 GLY A 662 N - CA - C ANGL. DEV. = -17.9 DEGREES REMARK 500 CYS A 675 CA - CB - SG ANGL. DEV. = 10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 2 14.12 -68.26 REMARK 500 LYS A 4 42.23 -95.47 REMARK 500 ILE A 11 73.11 -111.18 REMARK 500 SER A 12 -130.22 -178.45 REMARK 500 LEU A 13 -39.49 -153.73 REMARK 500 MET A 26 -80.45 -82.81 REMARK 500 ALA A 31 162.03 178.77 REMARK 500 PRO A 32 98.20 -39.31 REMARK 500 ARG A 39 -154.44 -160.18 REMARK 500 THR A 40 -90.10 -157.37 REMARK 500 GLU A 44 0.14 -66.02 REMARK 500 LYS A 52 34.94 72.53 REMARK 500 VAL A 57 133.02 165.91 REMARK 500 ARG A 69 -151.48 -91.52 REMARK 500 TYR A 72 -76.70 -91.57 REMARK 500 LYS A 73 76.72 97.71 REMARK 500 HIS A 91 -161.26 -122.26 REMARK 500 TYR A 92 -167.33 -160.94 REMARK 500 ALA A 94 84.41 -163.54 REMARK 500 ALA A 96 46.93 -142.36 REMARK 500 VAL A 97 70.75 -31.85 REMARK 500 LYS A 100 99.39 -45.67 REMARK 500 LYS A 113 -157.43 -78.63 REMARK 500 SER A 114 -179.11 -171.37 REMARK 500 CYS A 115 97.46 -162.59 REMARK 500 SER A 122 -71.98 -49.62 REMARK 500 TRP A 125 -41.47 166.99 REMARK 500 ARG A 133 -47.76 -19.33 REMARK 500 SER A 137 29.75 37.99 REMARK 500 ALA A 142 -68.86 173.15 REMARK 500 GLN A 146 -5.27 -58.86 REMARK 500 PHE A 152 -70.91 -76.00 REMARK 500 ALA A 155 114.85 -174.99 REMARK 500 CYS A 160 -24.65 79.45 REMARK 500 LEU A 169 42.87 -85.58 REMARK 500 CYS A 170 57.73 171.96 REMARK 500 LEU A 172 42.89 -92.72 REMARK 500 CYS A 183 50.65 -69.05 REMARK 500 SER A 185 7.55 -63.67 REMARK 500 TYR A 189 79.82 -106.52 REMARK 500 ALA A 203 -77.43 -48.64 REMARK 500 ASP A 205 -94.88 -74.19 REMARK 500 LYS A 210 -144.39 -59.44 REMARK 500 THR A 213 -17.36 -143.84 REMARK 500 LEU A 218 73.74 -106.17 REMARK 500 ALA A 222 39.60 -88.67 REMARK 500 ASP A 223 -19.94 -146.49 REMARK 500 GLN A 226 23.04 -57.94 REMARK 500 LEU A 229 -155.64 -72.77 REMARK 500 ASN A 233 39.21 -74.48 REMARK 500 THR A 235 -163.43 -120.03 REMARK 500 VAL A 239 -3.16 -57.23 REMARK 500 PHE A 242 -36.26 -37.61 REMARK 500 ALA A 248 158.98 168.64 REMARK 500 SER A 252 -162.03 -67.44 REMARK 500 ARG A 258 156.95 -24.27 REMARK 500 ASP A 261 11.30 93.59 REMARK 500 LYS A 263 70.91 49.31 REMARK 500 GLU A 276 -74.00 -91.35 REMARK 500 ASN A 281 18.54 83.66 REMARK 500 LYS A 282 -96.01 -116.99 REMARK 500 PHE A 286 101.88 -170.97 REMARK 500 PHE A 289 50.77 -116.69 REMARK 500 PRO A 292 176.37 -52.90 REMARK 500 ASP A 297 36.70 37.25 REMARK 500 LEU A 299 -72.58 67.07 REMARK 500 LYS A 301 118.77 -39.93 REMARK 500 SER A 303 -8.52 81.20 REMARK 500 PRO A 311 80.18 -66.04 REMARK 500 SER A 312 -21.37 -0.97 REMARK 500 ASP A 315 -142.00 -113.01 REMARK 500 SER A 316 -77.18 -49.14 REMARK 500 ALA A 327 -75.46 -88.05 REMARK 500 ASN A 330 -66.37 -18.07 REMARK 500 ARG A 332 4.71 -67.25 REMARK 500 THR A 334 -179.24 -47.63 REMARK 500 CYS A 348 88.58 -55.14 REMARK 500 VAL A 350 88.11 -60.07 REMARK 500 GLN A 359 11.32 -55.81 REMARK 500 GLN A 367 34.67 78.88 REMARK 500 THR A 376 -161.35 -128.85 REMARK 500 LYS A 386 34.10 -67.70 REMARK 500 ALA A 391 -151.97 -148.88 REMARK 500 LEU A 392 153.52 168.89 REMARK 500 PRO A 409 123.57 -24.14 REMARK 500 VAL A 410 -93.99 -101.88 REMARK 500 GLU A 413 53.50 -68.28 REMARK 500 SER A 422 -64.60 -21.19 REMARK 500 LEU A 423 -143.93 -64.25 REMARK 500 LEU A 427 9.47 -61.12 REMARK 500 THR A 430 96.91 -48.01 REMARK 500 TRP A 448 -43.63 -21.26 REMARK 500 SER A 450 31.34 -93.54 REMARK 500 THR A 459 -89.60 -30.21 REMARK 500 ASP A 462 -23.67 154.10 REMARK 500 ARG A 463 -170.36 -59.82 REMARK 500 THR A 464 -98.21 -70.54 REMARK 500 TRP A 467 -67.85 -174.68 REMARK 500 THR A 478 -84.25 -38.13 REMARK 500 ALA A 482 91.85 -33.40 REMARK 500 PRO A 493 85.75 -69.21 REMARK 500 ASP A 508 -146.95 -72.80 REMARK 500 LEU A 512 174.04 -48.62 REMARK 500 CYS A 515 97.59 54.95 REMARK 500 PRO A 517 25.18 -66.40 REMARK 500 SER A 519 -26.09 -18.26 REMARK 500 GLU A 521 93.34 -66.72 REMARK 500 TYR A 523 47.06 -96.95 REMARK 500 GLU A 535 31.43 -160.03 REMARK 500 ASP A 536 26.15 41.11 REMARK 500 ASN A 545 -47.19 -27.17 REMARK 500 GLU A 550 61.42 -110.07 REMARK 500 ASN A 551 15.11 -177.96 REMARK 500 SER A 556 -82.09 -86.33 REMARK 500 SER A 557 -48.43 167.75 REMARK 500 ALA A 561 38.27 -89.68 REMARK 500 LYS A 562 -76.00 -131.02 REMARK 500 GLU A 567 29.89 -76.39 REMARK 500 LEU A 572 111.47 -36.39 REMARK 500 THR A 582 -71.36 -59.95 REMARK 500 GLU A 583 55.43 -69.67 REMARK 500 TYR A 588 136.44 169.46 REMARK 500 ALA A 590 144.36 -175.56 REMARK 500 ASN A 594 170.75 -50.44 REMARK 500 SER A 601 34.26 -61.15 REMARK 500 ALA A 604 -91.80 -61.02 REMARK 500 ALA A 605 -18.44 -22.55 REMARK 500 LEU A 612 24.65 -79.41 REMARK 500 HIS A 613 -52.93 -130.54 REMARK 500 LEU A 617 -54.08 -132.46 REMARK 500 PHE A 618 42.56 -108.13 REMARK 500 CYS A 625 -66.79 -107.60 REMARK 500 ASP A 627 -89.51 -82.08 REMARK 500 PHE A 629 128.92 -176.19 REMARK 500 LEU A 631 -6.80 -58.01 REMARK 500 SER A 634 57.67 -163.31 REMARK 500 GLU A 635 52.83 28.59 REMARK 500 ASN A 638 59.53 73.31 REMARK 500 LEU A 640 -53.83 95.86 REMARK 500 ASN A 642 107.85 -50.72 REMARK 500 CYS A 647 -153.47 -131.23 REMARK 500 PRO A 655 105.26 -28.35 REMARK 500 THR A 656 178.46 -48.58 REMARK 500 LYS A 673 5.35 -63.56 REMARK 500 ALA A 685 43.58 -109.38 REMARK 500 PHE A 686 -18.66 -143.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 72 0.14 SIDE_CHAIN REMARK 500 TYR A 82 0.08 SIDE_CHAIN REMARK 500 TYR A 92 0.14 SIDE_CHAIN REMARK 500 PHE A 542 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 462 -21.46 REMARK 500 ARG A 463 -13.62 REMARK 500 SER A 557 -11.90 REMARK 500 ALA A 558 -17.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 690 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 60 OD1 REMARK 620 2 TYR A 92 OH 106.5 REMARK 620 3 TYR A 192 OH 119.9 101.9 REMARK 620 4 HIS A 253 NE2 97.8 138.4 94.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 691 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 433 OH REMARK 620 2 ASP A 395 OD1 123.3 REMARK 620 3 ASP A 395 OD2 137.3 50.3 REMARK 620 4 TYR A 526 OH 71.8 60.2 71.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 690 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 691 DBREF 1JW1 A 1 689 UNP Q29477 TRFL_CAPHI 20 708 SEQADV 1JW1 VAL A 42 UNP Q29477 ALA 61 CONFLICT SEQADV 1JW1 ASP A 61 UNP Q29477 SER 80 CONFLICT SEQADV 1JW1 LEU A 308 UNP Q29477 VAL 327 CONFLICT SEQADV 1JW1 VAL A 338 UNP Q29477 LEU 357 CONFLICT SEQADV 1JW1 ASP A 395 UNP Q29477 GLY 414 CONFLICT SEQADV 1JW1 HIS A 420 UNP Q29477 TYR 439 CONFLICT SEQADV 1JW1 LYS A 628 UNP Q29477 GLN 647 CONFLICT SEQRES 1 A 689 ALA PRO ARG LYS ASN VAL ARG TRP CYS ALA ILE SER LEU SEQRES 2 A 689 PRO GLU TRP SER LYS CYS TYR GLN TRP GLN ARG ARG MET SEQRES 3 A 689 ARG LYS LEU GLY ALA PRO SER ILE THR CYS VAL ARG ARG SEQRES 4 A 689 THR SER VAL LEU GLU CYS ILE ARG ALA ILE ALA GLY LYS SEQRES 5 A 689 ASN ALA ASP ALA VAL THR LEU ASP ASP GLY MET VAL PHE SEQRES 6 A 689 GLU ALA GLY ARG ASP PRO TYR LYS LEU ARG PRO VAL ALA SEQRES 7 A 689 ALA GLU ILE TYR GLY THR GLU LYS SER PRO GLN THR HIS SEQRES 8 A 689 TYR TYR ALA VAL ALA VAL VAL LYS LYS GLY SER ASN PHE SEQRES 9 A 689 LYS LEU ASP GLN LEU GLN GLY GLN LYS SER CYS HIS MET SEQRES 10 A 689 GLY LEU GLY ARG SER ALA GLY TRP ASN ILE PRO VAL GLY SEQRES 11 A 689 ILE LEU ARG PRO PRO LEU SER TRP THR GLU SER ALA GLU SEQRES 12 A 689 PRO LEU GLN GLY ALA VAL ALA ARG PHE PHE SER ALA SER SEQRES 13 A 689 CYS VAL PRO CYS VAL ASP GLY LYS ALA TYR PRO ASN LEU SEQRES 14 A 689 CYS GLN LEU CYS LYS GLY VAL GLY GLU ASN LYS CYS ALA SEQRES 15 A 689 CYS SER SER GLN GLU PRO TYR PHE GLY TYR SER GLY ALA SEQRES 16 A 689 PHE LYS CYS LEU GLN ASP GLY ALA GLY ASP VAL ALA PHE SEQRES 17 A 689 VAL LYS GLU THR THR VAL PHE GLU ASN LEU PRO GLU LYS SEQRES 18 A 689 ALA ASP ARG ASP GLN TYR GLU LEU LEU CYS LEU ASN ASN SEQRES 19 A 689 THR ARG ALA PRO VAL ASP ALA PHE LYS GLU CYS HIS LEU SEQRES 20 A 689 ALA GLN VAL PRO SER HIS ALA VAL VAL ALA ARG SER VAL SEQRES 21 A 689 ASP GLY LYS GLU ASN LEU ILE TRP GLU LEU LEU ARG LYS SEQRES 22 A 689 ALA GLN GLU LYS PHE GLY LYS ASN LYS SER GLN ARG PHE SEQRES 23 A 689 GLN LEU PHE GLY SER PRO GLU GLY ARG ARG ASP LEU LEU SEQRES 24 A 689 PHE LYS ASP SER ALA LEU GLY PHE LEU ARG ILE PRO SER SEQRES 25 A 689 LYS VAL ASP SER ALA LEU TYR LEU GLY SER ARG TYR LEU SEQRES 26 A 689 THR ALA LEU LYS ASN LEU ARG GLU THR ALA GLU GLU VAL SEQRES 27 A 689 LYS ALA ARG CYS THR ARG VAL VAL TRP CYS ALA VAL GLY SEQRES 28 A 689 PRO GLU GLU GLN SER LYS CYS GLN GLN TRP SER GLU GLN SEQRES 29 A 689 SER GLY GLN ASN VAL THR CYS ALA THR ALA SER THR THR SEQRES 30 A 689 ASP ASP CYS ILE ALA LEU VAL LEU LYS GLY GLU ALA ASP SEQRES 31 A 689 ALA LEU SER LEU ASP GLY GLY TYR ILE TYR THR ALA GLY SEQRES 32 A 689 LYS CYS GLY LEU VAL PRO VAL MET ALA GLU ASN ARG LYS SEQRES 33 A 689 SER SER LYS HIS SER SER LEU ASP CYS VAL LEU ARG PRO SEQRES 34 A 689 THR GLU GLY TYR LEU ALA VAL ALA VAL VAL LYS LYS ALA SEQRES 35 A 689 ASN GLU GLY LEU THR TRP ASN SER LEU LYS GLY LYS LYS SEQRES 36 A 689 SER CYS HIS THR ALA VAL ASP ARG THR ALA GLY TRP ASN SEQRES 37 A 689 ILE PRO MET GLY LEU ILE ALA ASN GLN THR GLY SER CYS SEQRES 38 A 689 ALA PHE ASP GLU PHE PHE SER GLN SER CYS ALA PRO GLY SEQRES 39 A 689 ALA ASP PRO LYS SER SER LEU CYS ALA LEU CYS ALA GLY SEQRES 40 A 689 ASP ASP GLN GLY LEU ASP LYS CYS VAL PRO ASN SER LYS SEQRES 41 A 689 GLU LYS TYR TYR GLY TYR THR GLY ALA PHE ARG CYS LEU SEQRES 42 A 689 ALA GLU ASP VAL GLY ASP VAL ALA PHE VAL LYS ASN ASP SEQRES 43 A 689 THR VAL TRP GLU ASN THR ASN GLY GLU SER SER ALA ASP SEQRES 44 A 689 TRP ALA LYS ASN LEU ASN ARG GLU ASP PHE ARG LEU LEU SEQRES 45 A 689 CYS LEU ASP GLY THR THR LYS PRO VAL THR GLU ALA GLN SEQRES 46 A 689 SER CYS TYR LEU ALA VAL ALA PRO ASN HIS ALA VAL VAL SEQRES 47 A 689 SER ARG SER ASP ARG ALA ALA HIS VAL GLU GLN VAL LEU SEQRES 48 A 689 LEU HIS GLN GLN ALA LEU PHE GLY LYS ASN GLY LYS ASN SEQRES 49 A 689 CYS PRO ASP LYS PHE CYS LEU PHE LYS SER GLU THR LYS SEQRES 50 A 689 ASN LEU LEU PHE ASN ASP ASN THR GLU CYS LEU ALA LYS SEQRES 51 A 689 LEU GLY GLY ARG PRO THR TYR GLU LYS TYR LEU GLY THR SEQRES 52 A 689 GLU TYR VAL THR ALA ILE ALA ASN LEU LYS LYS CYS SER SEQRES 53 A 689 THR SER PRO LEU LEU GLU ALA CYS ALA PHE LEU THR ARG HET FE A 690 1 HET FE A 691 1 HETNAM FE FE (III) ION FORMUL 2 FE 2(FE 3+) HELIX 1 1 LYS A 18 GLY A 30 1 13 HELIX 2 2 ILE A 46 GLY A 51 1 6 HELIX 3 3 LYS A 105 LEU A 109 5 5 HELIX 4 4 ARG A 133 SER A 137 5 5 HELIX 5 5 PHE A 196 ASP A 201 1 6 HELIX 6 6 THR A 213 LEU A 218 1 6 HELIX 7 7 LYS A 263 TRP A 268 1 6 HELIX 8 8 TRP A 268 LYS A 273 1 6 HELIX 9 9 ASP A 315 LEU A 320 1 6 HELIX 10 10 LYS A 329 GLU A 333 5 5 HELIX 11 11 LYS A 357 TRP A 361 5 5 HELIX 12 12 ASP A 379 VAL A 384 1 6 HELIX 13 13 GLY A 396 THR A 401 1 6 HELIX 14 14 THR A 447 LEU A 451 5 5 HELIX 15 15 TRP A 467 GLY A 472 1 6 HELIX 16 16 ALA A 482 PHE A 487 1 6 HELIX 17 17 ASN A 545 GLU A 550 1 6 HELIX 18 18 ASN A 565 PHE A 569 5 5 HELIX 19 19 VAL A 607 GLN A 615 1 9 HELIX 20 20 TYR A 657 GLY A 662 1 6 HELIX 21 21 GLY A 662 LYS A 673 1 12 SHEET 1 A 2 ARG A 7 ALA A 10 0 SHEET 2 A 2 THR A 35 ARG A 38 1 O VAL A 37 N TRP A 8 SHEET 1 B 3 THR A 58 LEU A 59 0 SHEET 2 B 3 ALA A 254 ARG A 258 -1 O ALA A 254 N LEU A 59 SHEET 3 B 3 LEU A 74 PRO A 76 -1 N ARG A 75 O ALA A 257 SHEET 1 C 3 SER A 87 GLN A 89 0 SHEET 2 C 3 GLU A 80 THR A 84 -1 N TYR A 82 O GLN A 89 SHEET 3 C 3 GLY A 306 PHE A 307 -1 O GLY A 306 N ILE A 81 SHEET 1 D 2 HIS A 91 TYR A 92 0 SHEET 2 D 2 VAL A 250 PRO A 251 -1 O VAL A 250 N TYR A 92 SHEET 1 E 2 GLY A 111 LYS A 113 0 SHEET 2 E 2 PHE A 153 ALA A 155 1 O SER A 154 N GLY A 111 SHEET 1 F 2 VAL A 345 TRP A 347 0 SHEET 2 F 2 VAL A 369 CYS A 371 1 O THR A 370 N TRP A 347 SHEET 1 G 2 SER A 393 LEU A 394 0 SHEET 2 G 2 ALA A 596 VAL A 597 -1 O ALA A 596 N LEU A 394 SHEET 1 H 2 MET A 411 ALA A 412 0 SHEET 2 H 2 ALA A 649 LYS A 650 -1 N ALA A 649 O ALA A 412 SHEET 1 I 3 VAL A 543 LYS A 544 0 SHEET 2 I 3 TYR A 433 VAL A 436 -1 N VAL A 436 O VAL A 543 SHEET 3 I 3 ALA A 590 ALA A 592 -1 O ALA A 592 N TYR A 433 SSBOND 1 CYS A 9 CYS A 45 1555 1555 2.03 SSBOND 2 CYS A 19 CYS A 36 1555 1555 2.04 SSBOND 3 CYS A 115 CYS A 198 1555 1555 2.01 SSBOND 4 CYS A 157 CYS A 173 1555 1555 2.04 SSBOND 5 CYS A 160 CYS A 183 1555 1555 2.04 SSBOND 6 CYS A 170 CYS A 181 1555 1555 2.03 SSBOND 7 CYS A 231 CYS A 245 1555 1555 2.04 SSBOND 8 CYS A 348 CYS A 380 1555 1555 2.04 SSBOND 9 CYS A 358 CYS A 371 1555 1555 2.04 SSBOND 10 CYS A 405 CYS A 684 1555 1555 2.01 SSBOND 11 CYS A 425 CYS A 647 1555 1555 2.03 SSBOND 12 CYS A 457 CYS A 532 1555 1555 2.01 SSBOND 13 CYS A 481 CYS A 675 1555 1555 2.04 SSBOND 14 CYS A 491 CYS A 505 1555 1555 2.02 SSBOND 15 CYS A 502 CYS A 515 1555 1555 2.01 SSBOND 16 CYS A 573 CYS A 587 1555 1555 2.03 SSBOND 17 CYS A 625 CYS A 630 1555 1555 2.03 LINK FE FE A 690 OD1 ASP A 60 1555 1555 1.96 LINK FE FE A 690 OH TYR A 92 1555 1555 1.49 LINK FE FE A 690 OH TYR A 192 1555 1555 1.85 LINK FE FE A 690 NE2 HIS A 253 1555 1555 2.14 LINK FE FE A 691 OH TYR A 433 1555 1555 1.32 LINK FE FE A 691 OD1 ASP A 395 1555 1555 2.43 LINK FE FE A 691 OD2 ASP A 395 1555 1555 2.74 LINK FE FE A 691 OH TYR A 526 1555 1555 2.38 SITE 1 AC1 4 ASP A 60 TYR A 92 TYR A 192 HIS A 253 SITE 1 AC2 5 ASP A 395 TYR A 433 THR A 464 TYR A 526 SITE 2 AC2 5 HIS A 595 CRYST1 104.600 153.800 155.050 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009560 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006502 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006450 0.00000