data_1KDM # _entry.id 1KDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KDM RCSB RCSB014840 WWPDB D_1000014840 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D2S 'The crystal structure of SHBG (trigonal crystal)' unspecified PDB 1F5F 'The crystal structure of SHBG complexed with Zn' unspecified PDB 1KDK 'The crystal structure of SHBG(EDTA-soak)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KDM _pdbx_database_status.recvd_initial_deposition_date 2001-11-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grishkovskaya, I.' 1 'Avvakumov, G.V.' 2 'Hammond, G.L.' 3 'Muller, Y.A.' 4 # _citation.id primary _citation.title 'Resolution of a disordered region at the entrance of the human sex hormone-binding globulin steroid-binding site.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 318 _citation.page_first 621 _citation.page_last 626 _citation.year 2002 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12054810 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)00169-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Grishkovskaya, I.' 1 primary 'Avvakumov, G.V.' 2 primary 'Hammond, G.L.' 3 primary 'Muller, Y.A.' 4 # _cell.entry_id 1KDM _cell.length_a 52.240 _cell.length_b 52.240 _cell.length_c 148.530 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KDM _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'sex hormone-binding globulin' 19655.336 1 ? ? 'N-terminal LG-domain' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 5-ALPHA-DIHYDROTESTOSTERONE 290.440 1 ? ? ? ? 4 water nat water 18.015 72 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWL DKQAEISASAPTSLRSC ; _entity_poly.pdbx_seq_one_letter_code_can ;DPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWL DKQAEISASAPTSLRSC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 PRO n 1 4 ALA n 1 5 VAL n 1 6 HIS n 1 7 LEU n 1 8 SER n 1 9 ASN n 1 10 GLY n 1 11 PRO n 1 12 GLY n 1 13 GLN n 1 14 GLU n 1 15 PRO n 1 16 ILE n 1 17 ALA n 1 18 VAL n 1 19 MET n 1 20 THR n 1 21 PHE n 1 22 ASP n 1 23 LEU n 1 24 THR n 1 25 LYS n 1 26 ILE n 1 27 THR n 1 28 LYS n 1 29 THR n 1 30 SER n 1 31 SER n 1 32 SER n 1 33 PHE n 1 34 GLU n 1 35 VAL n 1 36 ARG n 1 37 THR n 1 38 TRP n 1 39 ASP n 1 40 PRO n 1 41 GLU n 1 42 GLY n 1 43 VAL n 1 44 ILE n 1 45 PHE n 1 46 TYR n 1 47 GLY n 1 48 ASP n 1 49 THR n 1 50 ASN n 1 51 PRO n 1 52 LYS n 1 53 ASP n 1 54 ASP n 1 55 TRP n 1 56 PHE n 1 57 MET n 1 58 LEU n 1 59 GLY n 1 60 LEU n 1 61 ARG n 1 62 ASP n 1 63 GLY n 1 64 ARG n 1 65 PRO n 1 66 GLU n 1 67 ILE n 1 68 GLN n 1 69 LEU n 1 70 HIS n 1 71 ASN n 1 72 HIS n 1 73 TRP n 1 74 ALA n 1 75 GLN n 1 76 LEU n 1 77 THR n 1 78 VAL n 1 79 GLY n 1 80 ALA n 1 81 GLY n 1 82 PRO n 1 83 ARG n 1 84 LEU n 1 85 ASP n 1 86 ASP n 1 87 GLY n 1 88 ARG n 1 89 TRP n 1 90 HIS n 1 91 GLN n 1 92 VAL n 1 93 GLU n 1 94 VAL n 1 95 LYS n 1 96 MET n 1 97 GLU n 1 98 GLY n 1 99 ASP n 1 100 SER n 1 101 VAL n 1 102 LEU n 1 103 LEU n 1 104 GLU n 1 105 VAL n 1 106 ASP n 1 107 GLY n 1 108 GLU n 1 109 GLU n 1 110 VAL n 1 111 LEU n 1 112 ARG n 1 113 LEU n 1 114 ARG n 1 115 GLN n 1 116 VAL n 1 117 SER n 1 118 GLY n 1 119 PRO n 1 120 LEU n 1 121 THR n 1 122 SER n 1 123 LYS n 1 124 ARG n 1 125 HIS n 1 126 PRO n 1 127 ILE n 1 128 MET n 1 129 ARG n 1 130 ILE n 1 131 ALA n 1 132 LEU n 1 133 GLY n 1 134 GLY n 1 135 LEU n 1 136 LEU n 1 137 PHE n 1 138 PRO n 1 139 ALA n 1 140 SER n 1 141 ASN n 1 142 LEU n 1 143 ARG n 1 144 LEU n 1 145 PRO n 1 146 LEU n 1 147 VAL n 1 148 PRO n 1 149 ALA n 1 150 LEU n 1 151 ASP n 1 152 GLY n 1 153 CYS n 1 154 LEU n 1 155 ARG n 1 156 ARG n 1 157 ASP n 1 158 SER n 1 159 TRP n 1 160 LEU n 1 161 ASP n 1 162 LYS n 1 163 GLN n 1 164 ALA n 1 165 GLU n 1 166 ILE n 1 167 SER n 1 168 ALA n 1 169 SER n 1 170 ALA n 1 171 PRO n 1 172 THR n 1 173 SER n 1 174 LEU n 1 175 ARG n 1 176 SER n 1 177 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM109 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SHBG_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAG PRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQAEIS ASAPTSLRSC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P04278 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KDM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 177 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04278 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 170 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 12 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1KDM ASP A 1 ? UNP P04278 ? ? INSERTION 12 1 1 1KDM PRO A 119 ? UNP P04278 ? ? INSERTION 130 2 1 1KDM LEU A 120 ? UNP P04278 ? ? INSERTION 131 3 1 1KDM THR A 121 ? UNP P04278 ? ? INSERTION 132 4 1 1KDM SER A 122 ? UNP P04278 ? ? INSERTION 133 5 1 1KDM LYS A 123 ? UNP P04278 ? ? INSERTION 134 6 1 1KDM ARG A 124 ? UNP P04278 ? ? INSERTION 135 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHT non-polymer . 5-ALPHA-DIHYDROTESTOSTERONE ? 'C19 H30 O2' 290.440 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KDM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_percent_sol 52.25 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG4000, isopropanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'diamond (111), Ge(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.93 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.93 # _reflns.entry_id 1KDM _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 2.35 _reflns.number_obs 8915 _reflns.number_all 8915 _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 38.7 _reflns.pdbx_redundancy 8.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.40 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.379 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KDM _refine.ls_number_reflns_obs 7986 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 40.0 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.264 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 896 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 35.6 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1378 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 1472 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 40.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 0.039 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.35 _refine_ls_shell.d_res_low ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.264 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 896 _refine_ls_shell.number_reflns_obs 7986 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1KDM _struct.title 'THE CRYSTAL STRUCTURE OF THE HUMAN SEX HORMONE-BINDING GLOBULIN (TETRAGONAL CRYSTAL FORM)' _struct.pdbx_descriptor 'SEX HORMONE-BINDING GLOBULIN, DIHYDROTESTOSTERONE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KDM _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'SHBG, DHT, tetragonal crystal form, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 24 ? ILE A 26 ? THR A 35 ILE A 37 5 ? 3 HELX_P HELX_P2 2 PRO A 138 ? LEU A 142 ? PRO A 149 LEU A 153 5 ? 5 HELX_P HELX_P3 3 ASP A 161 ? GLN A 163 ? ASP A 172 GLN A 174 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 153 SG ? ? ? 1_555 A CYS 177 SG ? ? A CYS 164 A CYS 188 1_555 ? ? ? ? ? ? ? 2.039 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A GLU 41 O ? ? A CA 350 A GLU 52 1_555 ? ? ? ? ? ? ? 2.151 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A ALA 149 O ? ? A CA 350 A ALA 160 1_555 ? ? ? ? ? ? ? 2.279 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 350 A HOH 364 1_555 ? ? ? ? ? ? ? 2.148 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 350 A HOH 369 1_555 ? ? ? ? ? ? ? 2.565 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 39 OD1 ? ? A CA 350 A ASP 50 1_555 ? ? ? ? ? ? ? 2.581 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 39 OD2 ? ? A CA 350 A ASP 50 1_555 ? ? ? ? ? ? ? 2.428 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? HIS A 6 ? VAL A 16 HIS A 17 A 2 GLY A 152 ? SER A 158 ? GLY A 163 SER A 169 A 3 SER A 30 ? THR A 37 ? SER A 41 THR A 48 A 4 HIS A 90 ? GLU A 97 ? HIS A 101 GLU A 108 A 5 SER A 100 ? VAL A 105 ? SER A 111 VAL A 116 A 6 GLU A 108 ? LEU A 113 ? GLU A 119 LEU A 124 B 1 GLN A 75 ? GLY A 79 ? GLN A 86 GLY A 90 B 2 ARG A 64 ? HIS A 70 ? ARG A 75 HIS A 81 B 3 ASP A 54 ? ARG A 61 ? ASP A 65 ARG A 72 B 4 GLY A 42 ? ASN A 50 ? GLY A 53 ASN A 61 B 5 ILE A 127 ? LEU A 132 ? ILE A 138 LEU A 143 B 6 ALA A 17 ? ASP A 22 ? ALA A 28 ASP A 33 B 7 GLU A 165 ? ALA A 168 ? GLU A 176 ALA A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 16 O LEU A 154 ? O LEU A 165 A 2 3 O ARG A 155 ? O ARG A 166 N GLU A 34 ? N GLU A 45 A 3 4 N PHE A 33 ? N PHE A 44 O VAL A 92 ? O VAL A 103 A 4 5 N LYS A 95 ? N LYS A 106 O LEU A 102 ? O LEU A 113 A 5 6 N LEU A 103 ? N LEU A 114 O LEU A 111 ? O LEU A 122 B 1 2 O VAL A 78 ? O VAL A 89 N ILE A 67 ? N ILE A 78 B 2 3 O GLN A 68 ? O GLN A 79 N MET A 57 ? N MET A 68 B 3 4 O LEU A 58 ? O LEU A 69 N PHE A 45 ? N PHE A 56 B 4 5 N ASP A 48 ? N ASP A 59 O ARG A 129 ? O ARG A 140 B 5 6 O ILE A 130 ? O ILE A 141 N MET A 19 ? N MET A 30 B 6 7 N THR A 20 ? N THR A 31 O ILE A 166 ? O ILE A 177 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CA A 350' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE DHT A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 39 ? ASP A 50 . ? 1_555 ? 2 AC1 5 GLU A 41 ? GLU A 52 . ? 1_555 ? 3 AC1 5 ALA A 149 ? ALA A 160 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH A 364 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 369 . ? 1_555 ? 6 AC2 7 THR A 29 ? THR A 40 . ? 1_555 ? 7 AC2 7 SER A 30 ? SER A 41 . ? 1_555 ? 8 AC2 7 SER A 31 ? SER A 42 . ? 1_555 ? 9 AC2 7 ASP A 54 ? ASP A 65 . ? 1_555 ? 10 AC2 7 ASN A 71 ? ASN A 82 . ? 1_555 ? 11 AC2 7 LYS A 123 ? LYS A 134 . ? 1_555 ? 12 AC2 7 LEU A 160 ? LEU A 171 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KDM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KDM _atom_sites.fract_transf_matrix[1][1] 0.019142 _atom_sites.fract_transf_matrix[1][2] -0.000001 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019142 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006733 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 12 12 ASP ASP A . n A 1 2 PRO 2 13 13 PRO PRO A . n A 1 3 PRO 3 14 14 PRO PRO A . n A 1 4 ALA 4 15 15 ALA ALA A . n A 1 5 VAL 5 16 16 VAL VAL A . n A 1 6 HIS 6 17 17 HIS HIS A . n A 1 7 LEU 7 18 18 LEU LEU A . n A 1 8 SER 8 19 19 SER SER A . n A 1 9 ASN 9 20 20 ASN ASN A . n A 1 10 GLY 10 21 21 GLY GLY A . n A 1 11 PRO 11 22 22 PRO PRO A . n A 1 12 GLY 12 23 23 GLY GLY A . n A 1 13 GLN 13 24 24 GLN GLN A . n A 1 14 GLU 14 25 25 GLU GLU A . n A 1 15 PRO 15 26 26 PRO PRO A . n A 1 16 ILE 16 27 27 ILE ILE A . n A 1 17 ALA 17 28 28 ALA ALA A . n A 1 18 VAL 18 29 29 VAL VAL A . n A 1 19 MET 19 30 30 MET MET A . n A 1 20 THR 20 31 31 THR THR A . n A 1 21 PHE 21 32 32 PHE PHE A . n A 1 22 ASP 22 33 33 ASP ASP A . n A 1 23 LEU 23 34 34 LEU LEU A . n A 1 24 THR 24 35 35 THR THR A . n A 1 25 LYS 25 36 36 LYS LYS A . n A 1 26 ILE 26 37 37 ILE ILE A . n A 1 27 THR 27 38 38 THR THR A . n A 1 28 LYS 28 39 39 LYS LYS A . n A 1 29 THR 29 40 40 THR THR A . n A 1 30 SER 30 41 41 SER SER A . n A 1 31 SER 31 42 42 SER SER A . n A 1 32 SER 32 43 43 SER SER A . n A 1 33 PHE 33 44 44 PHE PHE A . n A 1 34 GLU 34 45 45 GLU GLU A . n A 1 35 VAL 35 46 46 VAL VAL A . n A 1 36 ARG 36 47 47 ARG ARG A . n A 1 37 THR 37 48 48 THR THR A . n A 1 38 TRP 38 49 49 TRP TRP A . n A 1 39 ASP 39 50 50 ASP ASP A . n A 1 40 PRO 40 51 51 PRO PRO A . n A 1 41 GLU 41 52 52 GLU GLU A . n A 1 42 GLY 42 53 53 GLY GLY A . n A 1 43 VAL 43 54 54 VAL VAL A . n A 1 44 ILE 44 55 55 ILE ILE A . n A 1 45 PHE 45 56 56 PHE PHE A . n A 1 46 TYR 46 57 57 TYR TYR A . n A 1 47 GLY 47 58 58 GLY GLY A . n A 1 48 ASP 48 59 59 ASP ASP A . n A 1 49 THR 49 60 60 THR THR A . n A 1 50 ASN 50 61 61 ASN ASN A . n A 1 51 PRO 51 62 62 PRO PRO A . n A 1 52 LYS 52 63 63 LYS LYS A . n A 1 53 ASP 53 64 64 ASP ASP A . n A 1 54 ASP 54 65 65 ASP ASP A . n A 1 55 TRP 55 66 66 TRP TRP A . n A 1 56 PHE 56 67 67 PHE PHE A . n A 1 57 MET 57 68 68 MET MET A . n A 1 58 LEU 58 69 69 LEU LEU A . n A 1 59 GLY 59 70 70 GLY GLY A . n A 1 60 LEU 60 71 71 LEU LEU A . n A 1 61 ARG 61 72 72 ARG ARG A . n A 1 62 ASP 62 73 73 ASP ASP A . n A 1 63 GLY 63 74 74 GLY GLY A . n A 1 64 ARG 64 75 75 ARG ARG A . n A 1 65 PRO 65 76 76 PRO PRO A . n A 1 66 GLU 66 77 77 GLU GLU A . n A 1 67 ILE 67 78 78 ILE ILE A . n A 1 68 GLN 68 79 79 GLN GLN A . n A 1 69 LEU 69 80 80 LEU LEU A . n A 1 70 HIS 70 81 81 HIS HIS A . n A 1 71 ASN 71 82 82 ASN ASN A . n A 1 72 HIS 72 83 83 HIS HIS A . n A 1 73 TRP 73 84 84 TRP TRP A . n A 1 74 ALA 74 85 85 ALA ALA A . n A 1 75 GLN 75 86 86 GLN GLN A . n A 1 76 LEU 76 87 87 LEU LEU A . n A 1 77 THR 77 88 88 THR THR A . n A 1 78 VAL 78 89 89 VAL VAL A . n A 1 79 GLY 79 90 90 GLY GLY A . n A 1 80 ALA 80 91 91 ALA ALA A . n A 1 81 GLY 81 92 92 GLY GLY A . n A 1 82 PRO 82 93 93 PRO PRO A . n A 1 83 ARG 83 94 94 ARG ARG A . n A 1 84 LEU 84 95 95 LEU LEU A . n A 1 85 ASP 85 96 96 ASP ASP A . n A 1 86 ASP 86 97 97 ASP ASP A . n A 1 87 GLY 87 98 98 GLY GLY A . n A 1 88 ARG 88 99 99 ARG ARG A . n A 1 89 TRP 89 100 100 TRP TRP A . n A 1 90 HIS 90 101 101 HIS HIS A . n A 1 91 GLN 91 102 102 GLN GLN A . n A 1 92 VAL 92 103 103 VAL VAL A . n A 1 93 GLU 93 104 104 GLU GLU A . n A 1 94 VAL 94 105 105 VAL VAL A . n A 1 95 LYS 95 106 106 LYS LYS A . n A 1 96 MET 96 107 107 MET MET A . n A 1 97 GLU 97 108 108 GLU GLU A . n A 1 98 GLY 98 109 109 GLY GLY A . n A 1 99 ASP 99 110 110 ASP ASP A . n A 1 100 SER 100 111 111 SER SER A . n A 1 101 VAL 101 112 112 VAL VAL A . n A 1 102 LEU 102 113 113 LEU LEU A . n A 1 103 LEU 103 114 114 LEU LEU A . n A 1 104 GLU 104 115 115 GLU GLU A . n A 1 105 VAL 105 116 116 VAL VAL A . n A 1 106 ASP 106 117 117 ASP ASP A . n A 1 107 GLY 107 118 118 GLY GLY A . n A 1 108 GLU 108 119 119 GLU GLU A . n A 1 109 GLU 109 120 120 GLU GLU A . n A 1 110 VAL 110 121 121 VAL VAL A . n A 1 111 LEU 111 122 122 LEU LEU A . n A 1 112 ARG 112 123 123 ARG ARG A . n A 1 113 LEU 113 124 124 LEU LEU A . n A 1 114 ARG 114 125 125 ARG ARG A . n A 1 115 GLN 115 126 126 GLN GLN A . n A 1 116 VAL 116 127 127 VAL VAL A . n A 1 117 SER 117 128 128 SER SER A . n A 1 118 GLY 118 129 129 GLY GLY A . n A 1 119 PRO 119 130 130 PRO PRO A . n A 1 120 LEU 120 131 131 LEU LEU A . n A 1 121 THR 121 132 132 THR THR A . n A 1 122 SER 122 133 133 SER SER A . n A 1 123 LYS 123 134 134 LYS LYS A . n A 1 124 ARG 124 135 135 ARG ARG A . n A 1 125 HIS 125 136 136 HIS HIS A . n A 1 126 PRO 126 137 137 PRO PRO A . n A 1 127 ILE 127 138 138 ILE ILE A . n A 1 128 MET 128 139 139 MET MET A . n A 1 129 ARG 129 140 140 ARG ARG A . n A 1 130 ILE 130 141 141 ILE ILE A . n A 1 131 ALA 131 142 142 ALA ALA A . n A 1 132 LEU 132 143 143 LEU LEU A . n A 1 133 GLY 133 144 144 GLY GLY A . n A 1 134 GLY 134 145 145 GLY GLY A . n A 1 135 LEU 135 146 146 LEU LEU A . n A 1 136 LEU 136 147 147 LEU LEU A . n A 1 137 PHE 137 148 148 PHE PHE A . n A 1 138 PRO 138 149 149 PRO PRO A . n A 1 139 ALA 139 150 150 ALA ALA A . n A 1 140 SER 140 151 151 SER SER A . n A 1 141 ASN 141 152 152 ASN ASN A . n A 1 142 LEU 142 153 153 LEU LEU A . n A 1 143 ARG 143 154 154 ARG ARG A . n A 1 144 LEU 144 155 155 LEU LEU A . n A 1 145 PRO 145 156 156 PRO PRO A . n A 1 146 LEU 146 157 157 LEU LEU A . n A 1 147 VAL 147 158 158 VAL VAL A . n A 1 148 PRO 148 159 159 PRO PRO A . n A 1 149 ALA 149 160 160 ALA ALA A . n A 1 150 LEU 150 161 161 LEU LEU A . n A 1 151 ASP 151 162 162 ASP ASP A . n A 1 152 GLY 152 163 163 GLY GLY A . n A 1 153 CYS 153 164 164 CYS CYS A . n A 1 154 LEU 154 165 165 LEU LEU A . n A 1 155 ARG 155 166 166 ARG ARG A . n A 1 156 ARG 156 167 167 ARG ARG A . n A 1 157 ASP 157 168 168 ASP ASP A . n A 1 158 SER 158 169 169 SER SER A . n A 1 159 TRP 159 170 170 TRP TRP A . n A 1 160 LEU 160 171 171 LEU LEU A . n A 1 161 ASP 161 172 172 ASP ASP A . n A 1 162 LYS 162 173 173 LYS LYS A . n A 1 163 GLN 163 174 174 GLN GLN A . n A 1 164 ALA 164 175 175 ALA ALA A . n A 1 165 GLU 165 176 176 GLU GLU A . n A 1 166 ILE 166 177 177 ILE ILE A . n A 1 167 SER 167 178 178 SER SER A . n A 1 168 ALA 168 179 179 ALA ALA A . n A 1 169 SER 169 180 180 SER SER A . n A 1 170 ALA 170 181 181 ALA ALA A . n A 1 171 PRO 171 182 182 PRO PRO A . n A 1 172 THR 172 183 183 THR THR A . n A 1 173 SER 173 184 184 SER SER A . n A 1 174 LEU 174 185 185 LEU LEU A . n A 1 175 ARG 175 186 186 ARG ARG A . n A 1 176 SER 176 187 187 SER SER A . n A 1 177 CYS 177 188 188 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 350 350 CA CA A . C 3 DHT 1 301 301 DHT DHT A . D 4 HOH 1 351 1 HOH WAT A . D 4 HOH 2 352 2 HOH WAT A . D 4 HOH 3 353 3 HOH WAT A . D 4 HOH 4 354 4 HOH WAT A . D 4 HOH 5 355 5 HOH WAT A . D 4 HOH 6 356 6 HOH WAT A . D 4 HOH 7 357 7 HOH WAT A . D 4 HOH 8 358 8 HOH WAT A . D 4 HOH 9 359 9 HOH WAT A . D 4 HOH 10 360 10 HOH WAT A . D 4 HOH 11 361 11 HOH WAT A . D 4 HOH 12 362 12 HOH WAT A . D 4 HOH 13 363 13 HOH WAT A . D 4 HOH 14 364 14 HOH WAT A . D 4 HOH 15 365 15 HOH WAT A . D 4 HOH 16 366 16 HOH WAT A . D 4 HOH 17 367 17 HOH WAT A . D 4 HOH 18 368 18 HOH WAT A . D 4 HOH 19 369 19 HOH WAT A . D 4 HOH 20 370 20 HOH WAT A . D 4 HOH 21 371 21 HOH WAT A . D 4 HOH 22 372 22 HOH WAT A . D 4 HOH 23 373 23 HOH WAT A . D 4 HOH 24 374 24 HOH WAT A . D 4 HOH 25 375 25 HOH WAT A . D 4 HOH 26 376 26 HOH WAT A . D 4 HOH 27 377 27 HOH WAT A . D 4 HOH 28 378 28 HOH WAT A . D 4 HOH 29 379 29 HOH WAT A . D 4 HOH 30 380 30 HOH WAT A . D 4 HOH 31 381 31 HOH WAT A . D 4 HOH 32 382 32 HOH WAT A . D 4 HOH 33 383 33 HOH WAT A . D 4 HOH 34 384 34 HOH WAT A . D 4 HOH 35 385 35 HOH WAT A . D 4 HOH 36 386 36 HOH WAT A . D 4 HOH 37 387 37 HOH WAT A . D 4 HOH 38 388 38 HOH WAT A . D 4 HOH 39 389 39 HOH WAT A . D 4 HOH 40 390 40 HOH WAT A . D 4 HOH 41 391 41 HOH WAT A . D 4 HOH 42 392 42 HOH WAT A . D 4 HOH 43 393 43 HOH WAT A . D 4 HOH 44 394 44 HOH WAT A . D 4 HOH 45 395 45 HOH WAT A . D 4 HOH 46 396 46 HOH WAT A . D 4 HOH 47 397 47 HOH WAT A . D 4 HOH 48 398 48 HOH WAT A . D 4 HOH 49 399 49 HOH WAT A . D 4 HOH 50 400 50 HOH WAT A . D 4 HOH 51 401 51 HOH WAT A . D 4 HOH 52 402 52 HOH WAT A . D 4 HOH 53 403 53 HOH WAT A . D 4 HOH 54 404 54 HOH WAT A . D 4 HOH 55 405 55 HOH WAT A . D 4 HOH 56 406 56 HOH WAT A . D 4 HOH 57 407 57 HOH WAT A . D 4 HOH 58 408 58 HOH WAT A . D 4 HOH 59 409 59 HOH WAT A . D 4 HOH 60 410 60 HOH WAT A . D 4 HOH 61 411 61 HOH WAT A . D 4 HOH 62 412 62 HOH WAT A . D 4 HOH 63 413 63 HOH WAT A . D 4 HOH 64 414 64 HOH WAT A . D 4 HOH 65 415 65 HOH WAT A . D 4 HOH 66 416 66 HOH WAT A . D 4 HOH 67 417 67 HOH WAT A . D 4 HOH 68 418 68 HOH WAT A . D 4 HOH 69 419 69 HOH WAT A . D 4 HOH 70 420 70 HOH WAT A . D 4 HOH 71 421 71 HOH WAT A . D 4 HOH 72 422 72 HOH WAT A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_565 x,-y+1,-z+1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 52.2400000000 0.0000000000 0.0000000000 -1.0000000000 74.2650000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 421 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 41 ? A GLU 52 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? A ALA 149 ? A ALA 160 ? 1_555 85.9 ? 2 O ? A GLU 41 ? A GLU 52 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? D HOH . ? A HOH 364 ? 1_555 79.5 ? 3 O ? A ALA 149 ? A ALA 160 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? D HOH . ? A HOH 364 ? 1_555 80.9 ? 4 O ? A GLU 41 ? A GLU 52 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? D HOH . ? A HOH 369 ? 1_555 106.4 ? 5 O ? A ALA 149 ? A ALA 160 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? D HOH . ? A HOH 369 ? 1_555 155.4 ? 6 O ? D HOH . ? A HOH 364 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 O ? D HOH . ? A HOH 369 ? 1_555 80.6 ? 7 O ? A GLU 41 ? A GLU 52 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD1 ? A ASP 39 ? A ASP 50 ? 1_555 83.6 ? 8 O ? A ALA 149 ? A ALA 160 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD1 ? A ASP 39 ? A ASP 50 ? 1_555 135.1 ? 9 O ? D HOH . ? A HOH 364 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD1 ? A ASP 39 ? A ASP 50 ? 1_555 138.8 ? 10 O ? D HOH . ? A HOH 369 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD1 ? A ASP 39 ? A ASP 50 ? 1_555 68.6 ? 11 O ? A GLU 41 ? A GLU 52 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD2 ? A ASP 39 ? A ASP 50 ? 1_555 100.1 ? 12 O ? A ALA 149 ? A ALA 160 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD2 ? A ASP 39 ? A ASP 50 ? 1_555 85.8 ? 13 O ? D HOH . ? A HOH 364 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD2 ? A ASP 39 ? A ASP 50 ? 1_555 166.6 ? 14 O ? D HOH . ? A HOH 369 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD2 ? A ASP 39 ? A ASP 50 ? 1_555 112.1 ? 15 OD1 ? A ASP 39 ? A ASP 50 ? 1_555 CA ? B CA . ? A CA 350 ? 1_555 OD2 ? A ASP 39 ? A ASP 50 ? 1_555 53.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-15 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR 'data collection' . ? 1 XDS 'data reduction' . ? 2 REFMAC refinement . ? 3 MAR 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A SER 19 ? ? CA A SER 19 ? ? CB A SER 19 ? ? 121.69 110.50 11.19 1.50 N 2 1 CD A ARG 47 ? ? NE A ARG 47 ? ? CZ A ARG 47 ? ? 134.61 123.60 11.01 1.40 N 3 1 NE A ARG 47 ? ? CZ A ARG 47 ? ? NH1 A ARG 47 ? ? 124.17 120.30 3.87 0.50 N 4 1 OE1 A GLU 52 ? ? CD A GLU 52 ? ? OE2 A GLU 52 ? ? 116.09 123.30 -7.21 1.20 N 5 1 CB A ASP 59 ? ? CG A ASP 59 ? ? OD1 A ASP 59 ? ? 125.55 118.30 7.25 0.90 N 6 1 CB A ASP 73 ? ? CG A ASP 73 ? ? OD2 A ASP 73 ? ? 126.51 118.30 8.21 0.90 N 7 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH1 A ARG 75 ? ? 124.56 120.30 4.26 0.50 N 8 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH2 A ARG 75 ? ? 115.58 120.30 -4.72 0.50 N 9 1 CA A LEU 80 ? ? CB A LEU 80 ? ? CG A LEU 80 ? ? 130.75 115.30 15.45 2.30 N 10 1 NE A ARG 94 ? ? CZ A ARG 94 ? ? NH1 A ARG 94 ? ? 117.15 120.30 -3.15 0.50 N 11 1 NE A ARG 99 ? ? CZ A ARG 99 ? ? NH2 A ARG 99 ? ? 117.01 120.30 -3.29 0.50 N 12 1 CA A VAL 103 ? ? CB A VAL 103 ? ? CG2 A VAL 103 ? ? 120.01 110.90 9.11 1.50 N 13 1 CB A GLU 108 ? ? CA A GLU 108 ? ? C A GLU 108 ? ? 123.83 110.40 13.43 2.00 N 14 1 CD A ARG 135 ? ? NE A ARG 135 ? ? CZ A ARG 135 ? ? 147.40 123.60 23.80 1.40 N 15 1 NE A ARG 135 ? ? CZ A ARG 135 ? ? NH2 A ARG 135 ? ? 124.09 120.30 3.79 0.50 N 16 1 NE A ARG 140 ? ? CZ A ARG 140 ? ? NH2 A ARG 140 ? ? 117.17 120.30 -3.13 0.50 N 17 1 NE A ARG 166 ? ? CZ A ARG 166 ? ? NH2 A ARG 166 ? ? 114.11 120.30 -6.19 0.50 N 18 1 CD A ARG 167 ? ? NE A ARG 167 ? ? CZ A ARG 167 ? ? 114.27 123.60 -9.33 1.40 N 19 1 NE A ARG 167 ? ? CZ A ARG 167 ? ? NH1 A ARG 167 ? ? 116.11 120.30 -4.19 0.50 N 20 1 CB A ASP 172 ? ? CG A ASP 172 ? ? OD2 A ASP 172 ? ? 112.62 118.30 -5.68 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 40 ? ? -115.88 59.42 2 1 ASP A 64 ? ? -150.76 14.51 3 1 ASP A 96 ? ? -81.57 49.51 4 1 LEU A 131 ? ? -66.39 -70.56 5 1 THR A 132 ? ? -16.93 -54.18 6 1 SER A 133 ? ? -95.25 53.81 7 1 ARG A 135 ? ? -63.53 76.99 8 1 HIS A 136 ? ? 100.59 99.59 9 1 PRO A 137 ? ? -80.51 36.00 10 1 LEU A 171 ? ? 43.97 -129.14 11 1 PRO A 182 ? ? -94.04 40.54 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id GLU _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 108 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 12 ? CG ? A ASP 1 CG 2 1 Y 1 A ASP 12 ? OD1 ? A ASP 1 OD1 3 1 Y 1 A ASP 12 ? OD2 ? A ASP 1 OD2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 5-ALPHA-DIHYDROTESTOSTERONE DHT 4 water HOH #