data_1KFP # _entry.id 1KFP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KFP RCSB RCSB014907 WWPDB D_1000014907 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KFP _pdbx_database_status.recvd_initial_deposition_date 2001-11-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mandard, N.' 1 'Bulet, P.' 2 'Caille, A.' 3 'Daffre, S.' 4 'Vovelle, F.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The solution structure of gomesin, an antimicrobial cysteine-rich peptide from the spider.' Eur.J.Biochem. 269 1190 1198 2002 EJBCAI IX 0014-2956 0262 ? 11856345 10.1046/j.0014-2956.2002.02760.x 1 ;Isolation and characterization of gomesin, an 18-residue cysteine-rich defense peptide from the spider Acanthoscurria gomesiana hemocytes with sequence similarities to horseshoe crab antimicrobial peptides of the tachyplesin family ; J.Biol.Chem. 275 33464 33470 2000 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.M001491200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mandard, N.' 1 ? primary 'Bulet, P.' 2 ? primary 'Caille, A.' 3 ? primary 'Daffre, S.' 4 ? primary 'Vovelle, F.' 5 ? 1 'Silva, P.I.' 6 ? 1 'Daffre, S.' 7 ? 1 'Bulet, P.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description GOMESIN _entity.formula_weight 2279.762 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(PCA)CRRLCYKQRCVTYCRGR(NH2)' _entity_poly.pdbx_seq_one_letter_code_can QCRRLCYKQRCVTYCRGRX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 CYS n 1 3 ARG n 1 4 ARG n 1 5 LEU n 1 6 CYS n 1 7 TYR n 1 8 LYS n 1 9 GLN n 1 10 ARG n 1 11 CYS n 1 12 VAL n 1 13 THR n 1 14 TYR n 1 15 CYS n 1 16 ARG n 1 17 GLY n 1 18 ARG n 1 19 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Acanthoscurria gomesiana' _pdbx_entity_src_syn.organism_common_name 'mygalomorphae spider' _pdbx_entity_src_syn.ncbi_taxonomy_id 115339 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GOME_ACAGO _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QCRRLCYKQRCVTYCRGR _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P82358 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KFP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 18 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P82358 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 18 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 DQF-COSY 2 1 1 '2D NOESY' 3 1 1 clean-TOCSY 4 2 1 '2D NOESY' 5 2 1 Clean-TOCSY 6 1 2 '2D NOESY' 7 1 2 Clean-TOCSY # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 278 ambient 3.5 ? ? K 2 285 ambient 3.5 ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '3.3mM Gomesin' '90% H2O/10% D2O' 2 '3.3mM Gomesin' '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1KFP _pdbx_nmr_refine.method ;distance geometry simulated annealing energy minimization ; _pdbx_nmr_refine.details ;The 20 structures are based on a total of 289 restraints, 279 are NOE-derived distance constraints, 4 are used for hydrogen bonds modelling and 6 (i.e. 2x3) are used for disulfide bridge modelling. No dihedral angle restraints used. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1KFP _pdbx_nmr_details.text 'This solution structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1KFP _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria ;structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal DYANA 1.5 'structure solution' Guentert 1 X-PLOR 3.1 refinement Brunger 2 VNMR 6.1 processing 'Varian, Inc.' 3 # _exptl.entry_id 1KFP _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1KFP _struct.title 'Solution structure of the antimicrobial 18-residue gomesin' _struct.pdbx_descriptor GOMESIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KFP _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'hairpin-like, beta-sheet, disulfide bridges, ANTIBIOTIC' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 15 SG ? ? A CYS 2 A CYS 15 1_555 ? ? ? ? ? ? ? 2.022 ? disulf2 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 11 SG ? ? A CYS 6 A CYS 11 1_555 ? ? ? ? ? ? ? 2.024 ? covale1 covale both ? A PCA 1 C ? ? ? 1_555 A CYS 2 N ? ? A PCA 1 A CYS 2 1_555 ? ? ? ? ? ? ? 1.286 ? covale2 covale both ? A ARG 18 C ? ? ? 1_555 A NH2 19 N ? ? A ARG 18 A NH2 19 1_555 ? ? ? ? ? ? ? 1.298 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 2 ? TYR A 7 ? CYS A 2 TYR A 7 A 2 ARG A 10 ? CYS A 15 ? ARG A 10 CYS A 15 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 5 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 5 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 12 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 12 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 19' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id ARG _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 18 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id ARG _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 18 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _database_PDB_matrix.entry_id 1KFP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KFP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 CYS 15 15 15 CYS CYS A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 NH2 19 19 19 NH2 NH2 A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PCA _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PCA _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLN _pdbx_struct_mod_residue.details 'PYROGLUTAMIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-04-10 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Polymer sequence' 6 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_poly 2 4 'Structure model' pdbx_entity_src_syn 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_mod_residue 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 2 4 'Structure model' '_pdbx_entity_src_syn.details' 3 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 4 4 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 5 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 6 4 'Structure model' '_pdbx_struct_mod_residue.parent_comp_id' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH2 A ARG 3 ? ? 114.11 120.30 -6.19 0.50 N 2 2 NH1 A ARG 4 ? ? CZ A ARG 4 ? ? NH2 A ARG 4 ? ? 126.35 119.40 6.95 1.10 N 3 2 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 115.43 120.30 -4.87 0.50 N 4 2 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 115.98 120.30 -4.32 0.50 N 5 2 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 116.91 120.30 -3.39 0.50 N 6 3 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH2 A ARG 3 ? ? 114.74 120.30 -5.56 0.50 N 7 3 NH1 A ARG 4 ? ? CZ A ARG 4 ? ? NH2 A ARG 4 ? ? 126.09 119.40 6.69 1.10 N 8 3 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 115.56 120.30 -4.74 0.50 N 9 3 CB A TYR 7 ? ? CG A TYR 7 ? ? CD2 A TYR 7 ? ? 116.57 121.00 -4.43 0.60 N 10 3 CB A TYR 7 ? ? CG A TYR 7 ? ? CD1 A TYR 7 ? ? 125.16 121.00 4.16 0.60 N 11 3 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 115.57 120.30 -4.73 0.50 N 12 3 CB A TYR 14 ? ? CG A TYR 14 ? ? CD1 A TYR 14 ? ? 125.06 121.00 4.06 0.60 N 13 3 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 116.71 120.30 -3.59 0.50 N 14 4 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 116.34 120.30 -3.96 0.50 N 15 4 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.29 120.30 -4.01 0.50 N 16 5 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH2 A ARG 3 ? ? 114.95 120.30 -5.35 0.50 N 17 6 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 116.67 120.30 -3.63 0.50 N 18 6 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.27 120.30 -4.03 0.50 N 19 6 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 115.64 120.30 -4.66 0.50 N 20 6 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 116.80 120.30 -3.50 0.50 N 21 6 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH2 A ARG 18 ? ? 116.96 120.30 -3.34 0.50 N 22 7 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.29 120.30 -4.01 0.50 N 23 7 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 117.03 120.30 -3.27 0.50 N 24 8 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 115.94 120.30 -4.36 0.50 N 25 8 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 115.78 120.30 -4.52 0.50 N 26 9 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 117.19 120.30 -3.11 0.50 N 27 9 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.86 120.30 -3.44 0.50 N 28 9 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 116.47 120.30 -3.83 0.50 N 29 9 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 116.99 120.30 -3.31 0.50 N 30 10 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 116.13 120.30 -4.17 0.50 N 31 10 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.60 120.30 -3.70 0.50 N 32 10 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 116.79 120.30 -3.51 0.50 N 33 11 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 117.06 120.30 -3.24 0.50 N 34 11 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 117.06 120.30 -3.24 0.50 N 35 11 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 116.89 120.30 -3.41 0.50 N 36 12 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.08 120.30 -4.22 0.50 N 37 13 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH2 A ARG 4 ? ? 116.92 120.30 -3.38 0.50 N 38 13 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH2 A ARG 10 ? ? 116.14 120.30 -4.16 0.50 N 39 13 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 116.96 120.30 -3.34 0.50 N 40 14 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 115.78 120.30 -4.52 0.50 N 41 14 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH2 A ARG 18 ? ? 117.24 120.30 -3.06 0.50 N 42 15 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 115.63 120.30 -4.67 0.50 N 43 15 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.98 120.30 -3.32 0.50 N 44 15 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 117.22 120.30 -3.08 0.50 N 45 16 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 117.08 120.30 -3.22 0.50 N 46 16 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 115.63 120.30 -4.67 0.50 N 47 16 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH2 A ARG 10 ? ? 117.00 120.30 -3.30 0.50 N 48 16 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 117.10 120.30 -3.20 0.50 N 49 17 CA A CYS 2 ? ? CB A CYS 2 ? ? SG A CYS 2 ? ? 121.36 114.20 7.16 1.10 N 50 17 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 117.09 120.30 -3.21 0.50 N 51 17 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH1 A ARG 16 ? ? 117.27 120.30 -3.03 0.50 N 52 17 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 117.29 120.30 -3.01 0.50 N 53 18 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH2 A ARG 3 ? ? 117.17 120.30 -3.13 0.50 N 54 18 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.81 120.30 -3.49 0.50 N 55 18 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 116.49 120.30 -3.81 0.50 N 56 18 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 117.25 120.30 -3.05 0.50 N 57 19 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH2 A ARG 4 ? ? 116.36 120.30 -3.94 0.50 N 58 20 NE A ARG 3 ? ? CZ A ARG 3 ? ? NH1 A ARG 3 ? ? 116.54 120.30 -3.76 0.50 N 59 20 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 116.98 120.30 -3.32 0.50 N 60 20 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH2 A ARG 10 ? ? 116.86 120.30 -3.44 0.50 N 61 20 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH2 A ARG 16 ? ? 117.17 120.30 -3.13 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 8 ? ? 25.14 25.59 2 1 GLN A 9 ? ? -175.34 -47.03 3 2 LYS A 8 ? ? 39.93 18.82 4 2 GLN A 9 ? ? -170.27 -47.65 5 3 TYR A 7 ? ? -102.15 57.40 6 3 LYS A 8 ? ? 67.98 -47.45 7 4 LYS A 8 ? ? 41.03 11.24 8 4 GLN A 9 ? ? -158.35 -51.97 9 5 LYS A 8 ? ? 36.87 13.98 10 5 GLN A 9 ? ? -157.07 -53.73 11 6 TYR A 7 ? ? -101.91 78.32 12 6 LYS A 8 ? ? 18.68 34.98 13 6 GLN A 9 ? ? 178.04 -40.10 14 7 TYR A 7 ? ? -102.98 79.24 15 7 LYS A 8 ? ? 16.41 40.52 16 7 GLN A 9 ? ? 172.19 -39.32 17 8 LYS A 8 ? ? 39.54 9.77 18 8 GLN A 9 ? ? -144.81 -52.84 19 9 LYS A 8 ? ? 43.29 14.57 20 9 GLN A 9 ? ? -161.58 -55.49 21 10 TYR A 7 ? ? -101.30 65.28 22 10 LYS A 8 ? ? 38.68 12.85 23 10 GLN A 9 ? ? -149.59 -51.83 24 11 LYS A 8 ? ? 21.99 73.76 25 11 GLN A 9 ? ? 129.05 -55.12 26 12 TYR A 7 ? ? -106.78 61.76 27 12 LYS A 8 ? ? 30.43 42.75 28 12 GLN A 9 ? ? -176.64 -64.12 29 13 TYR A 7 ? ? -101.06 74.47 30 13 LYS A 8 ? ? 41.81 23.62 31 13 GLN A 9 ? ? -173.77 -50.62 32 14 LYS A 8 ? ? 0.72 76.88 33 14 GLN A 9 ? ? 148.62 -46.87 34 15 LYS A 8 ? ? 37.66 7.58 35 15 GLN A 9 ? ? -157.30 -45.98 36 16 LYS A 8 ? ? 68.10 -67.66 37 16 GLN A 9 ? ? -141.49 -10.28 38 17 LYS A 8 ? ? 17.50 44.73 39 17 GLN A 9 ? ? 170.55 -53.06 40 18 LYS A 8 ? ? 35.11 13.92 41 18 GLN A 9 ? ? -168.38 -47.53 42 19 LYS A 8 ? ? 32.04 51.03 43 19 GLN A 9 ? ? 169.81 -62.55 44 20 LYS A 8 ? ? 69.25 -62.22 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 3 ? ? 0.233 'SIDE CHAIN' 2 1 ARG A 4 ? ? 0.314 'SIDE CHAIN' 3 1 ARG A 10 ? ? 0.317 'SIDE CHAIN' 4 1 ARG A 16 ? ? 0.311 'SIDE CHAIN' 5 1 ARG A 18 ? ? 0.301 'SIDE CHAIN' 6 2 ARG A 3 ? ? 0.301 'SIDE CHAIN' 7 2 ARG A 4 ? ? 0.279 'SIDE CHAIN' 8 2 ARG A 10 ? ? 0.314 'SIDE CHAIN' 9 2 ARG A 16 ? ? 0.302 'SIDE CHAIN' 10 2 ARG A 18 ? ? 0.156 'SIDE CHAIN' 11 3 ARG A 3 ? ? 0.305 'SIDE CHAIN' 12 3 ARG A 4 ? ? 0.286 'SIDE CHAIN' 13 3 ARG A 10 ? ? 0.308 'SIDE CHAIN' 14 3 ARG A 16 ? ? 0.239 'SIDE CHAIN' 15 3 ARG A 18 ? ? 0.317 'SIDE CHAIN' 16 4 ARG A 3 ? ? 0.308 'SIDE CHAIN' 17 4 ARG A 4 ? ? 0.292 'SIDE CHAIN' 18 4 ARG A 10 ? ? 0.308 'SIDE CHAIN' 19 4 ARG A 16 ? ? 0.322 'SIDE CHAIN' 20 4 ARG A 18 ? ? 0.318 'SIDE CHAIN' 21 5 ARG A 3 ? ? 0.269 'SIDE CHAIN' 22 5 ARG A 4 ? ? 0.313 'SIDE CHAIN' 23 5 ARG A 10 ? ? 0.107 'SIDE CHAIN' 24 5 ARG A 16 ? ? 0.309 'SIDE CHAIN' 25 5 ARG A 18 ? ? 0.317 'SIDE CHAIN' 26 6 ARG A 3 ? ? 0.331 'SIDE CHAIN' 27 6 ARG A 4 ? ? 0.304 'SIDE CHAIN' 28 6 ARG A 10 ? ? 0.283 'SIDE CHAIN' 29 6 ARG A 16 ? ? 0.253 'SIDE CHAIN' 30 6 ARG A 18 ? ? 0.305 'SIDE CHAIN' 31 7 ARG A 3 ? ? 0.301 'SIDE CHAIN' 32 7 ARG A 4 ? ? 0.304 'SIDE CHAIN' 33 7 ARG A 10 ? ? 0.208 'SIDE CHAIN' 34 7 ARG A 16 ? ? 0.269 'SIDE CHAIN' 35 7 ARG A 18 ? ? 0.305 'SIDE CHAIN' 36 8 ARG A 3 ? ? 0.122 'SIDE CHAIN' 37 8 ARG A 4 ? ? 0.293 'SIDE CHAIN' 38 8 ARG A 10 ? ? 0.205 'SIDE CHAIN' 39 8 ARG A 16 ? ? 0.314 'SIDE CHAIN' 40 8 ARG A 18 ? ? 0.302 'SIDE CHAIN' 41 9 ARG A 3 ? ? 0.206 'SIDE CHAIN' 42 9 ARG A 4 ? ? 0.313 'SIDE CHAIN' 43 9 ARG A 16 ? ? 0.237 'SIDE CHAIN' 44 9 ARG A 18 ? ? 0.295 'SIDE CHAIN' 45 10 ARG A 3 ? ? 0.249 'SIDE CHAIN' 46 10 ARG A 4 ? ? 0.312 'SIDE CHAIN' 47 10 ARG A 10 ? ? 0.320 'SIDE CHAIN' 48 10 ARG A 16 ? ? 0.322 'SIDE CHAIN' 49 10 ARG A 18 ? ? 0.279 'SIDE CHAIN' 50 11 ARG A 3 ? ? 0.284 'SIDE CHAIN' 51 11 ARG A 4 ? ? 0.312 'SIDE CHAIN' 52 11 ARG A 10 ? ? 0.303 'SIDE CHAIN' 53 11 ARG A 16 ? ? 0.306 'SIDE CHAIN' 54 11 ARG A 18 ? ? 0.309 'SIDE CHAIN' 55 12 ARG A 3 ? ? 0.136 'SIDE CHAIN' 56 12 ARG A 4 ? ? 0.278 'SIDE CHAIN' 57 12 ARG A 10 ? ? 0.313 'SIDE CHAIN' 58 12 ARG A 16 ? ? 0.312 'SIDE CHAIN' 59 12 ARG A 18 ? ? 0.315 'SIDE CHAIN' 60 13 ARG A 3 ? ? 0.088 'SIDE CHAIN' 61 13 ARG A 4 ? ? 0.294 'SIDE CHAIN' 62 13 ARG A 10 ? ? 0.316 'SIDE CHAIN' 63 13 ARG A 16 ? ? 0.165 'SIDE CHAIN' 64 13 ARG A 18 ? ? 0.312 'SIDE CHAIN' 65 14 ARG A 3 ? ? 0.281 'SIDE CHAIN' 66 14 ARG A 4 ? ? 0.314 'SIDE CHAIN' 67 14 ARG A 10 ? ? 0.309 'SIDE CHAIN' 68 14 ARG A 16 ? ? 0.287 'SIDE CHAIN' 69 14 ARG A 18 ? ? 0.310 'SIDE CHAIN' 70 15 ARG A 3 ? ? 0.328 'SIDE CHAIN' 71 15 ARG A 4 ? ? 0.298 'SIDE CHAIN' 72 15 ARG A 10 ? ? 0.295 'SIDE CHAIN' 73 15 ARG A 16 ? ? 0.316 'SIDE CHAIN' 74 15 ARG A 18 ? ? 0.321 'SIDE CHAIN' 75 16 ARG A 3 ? ? 0.316 'SIDE CHAIN' 76 16 ARG A 4 ? ? 0.300 'SIDE CHAIN' 77 16 ARG A 10 ? ? 0.304 'SIDE CHAIN' 78 16 ARG A 16 ? ? 0.311 'SIDE CHAIN' 79 16 ARG A 18 ? ? 0.309 'SIDE CHAIN' 80 17 ARG A 3 ? ? 0.321 'SIDE CHAIN' 81 17 ARG A 4 ? ? 0.282 'SIDE CHAIN' 82 17 ARG A 10 ? ? 0.159 'SIDE CHAIN' 83 17 ARG A 16 ? ? 0.317 'SIDE CHAIN' 84 17 ARG A 18 ? ? 0.309 'SIDE CHAIN' 85 18 ARG A 3 ? ? 0.075 'SIDE CHAIN' 86 18 ARG A 4 ? ? 0.309 'SIDE CHAIN' 87 18 ARG A 10 ? ? 0.291 'SIDE CHAIN' 88 18 ARG A 16 ? ? 0.314 'SIDE CHAIN' 89 18 ARG A 18 ? ? 0.310 'SIDE CHAIN' 90 19 ARG A 3 ? ? 0.312 'SIDE CHAIN' 91 19 ARG A 4 ? ? 0.266 'SIDE CHAIN' 92 19 ARG A 10 ? ? 0.141 'SIDE CHAIN' 93 19 ARG A 16 ? ? 0.189 'SIDE CHAIN' 94 19 ARG A 18 ? ? 0.312 'SIDE CHAIN' 95 20 ARG A 3 ? ? 0.322 'SIDE CHAIN' 96 20 ARG A 4 ? ? 0.290 'SIDE CHAIN' 97 20 ARG A 10 ? ? 0.312 'SIDE CHAIN' 98 20 ARG A 16 ? ? 0.311 'SIDE CHAIN' 99 20 ARG A 18 ? ? 0.316 'SIDE CHAIN' #