HEADER TRANSFERASE 29-NOV-01 1KHC TITLE CRYSTAL STRUCTURE OF THE PWWP DOMAIN OF MAMMALIAN DNA TITLE 2 METHYLTRANSFERASE DNMT3B COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA CYTOSINE-5 METHYLTRANSFERASE 3B2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PWWP DOMAIN (RESIDUES 219-365); COMPND 5 EC: 2.1.1.37; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DNMT3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS FIVE BETA-SHEETS BARREL FOLLOWED BY FIVE-HELIX BUNDLE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.QIU,K.SAWADA,X.ZHANG,X.CHENG REVDAT 6 14-FEB-24 1KHC 1 REMARK LINK REVDAT 5 16-NOV-11 1KHC 1 VERSN HETATM REVDAT 4 24-FEB-09 1KHC 1 VERSN REVDAT 3 01-APR-03 1KHC 1 JRNL REVDAT 2 13-MAR-02 1KHC 1 HETNAM REMARK HET FORMUL REVDAT 2 2 1 HETATM REVDAT 1 27-FEB-02 1KHC 0 JRNL AUTH C.QIU,K.SAWADA,X.ZHANG,X.CHENG JRNL TITL THE PWWP DOMAIN OF MAMMALIAN DNA METHYLTRANSFERASE DNMT3B JRNL TITL 2 DEFINES A NEW FAMILY OF DNA-BINDING FOLDS. JRNL REF NAT.STRUCT.BIOL. V. 9 217 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 11836534 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 14656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1477 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1450 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 11.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 166 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1056 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.21 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.615 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KHC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-01. REMARK 100 THE DEPOSITION ID IS D_1000014961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : CONFOCAL MULTILAYER MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15308 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.14800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.1M SODIUM CACODYLATE, REMARK 280 0.2M SODIUM ACETATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 124.57333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.28667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.43000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.14333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 155.71667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 124.57333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 62.28667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.14333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 93.43000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 155.71667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 49 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 140 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 150 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 219 REMARK 465 ASP A 220 REMARK 465 SER A 221 REMARK 465 LYS A 359 REMARK 465 LYS A 360 REMARK 465 GLN A 361 REMARK 465 PRO A 362 REMARK 465 GLU A 363 REMARK 465 ASN A 364 REMARK 465 LYS A 365 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 222 N CA O CB OG1 CG2 REMARK 470 GLN A 225 CB CG CD OE1 NE2 REMARK 470 ASP A 227 CB CG OD1 OD2 REMARK 470 LYS A 228 CE NZ REMARK 470 PHE A 243 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 254 CE NZ REMARK 470 LYS A 301 CE NZ REMARK 470 LEU A 332 CD1 CD2 REMARK 470 GLU A 353 CD OE1 OE2 REMARK 470 LYS A 356 CE NZ REMARK 470 ASN A 358 CA C O CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 226 19.86 -147.40 REMARK 500 PHE A 230 131.18 75.34 REMARK 500 LYS A 258 -116.37 -115.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 THE AUTHORS WERE UNABLE TO FIGURE OUT THE REMARK 600 IDENTITY OF THE MOLECULES LABELED AS "UNX" REMARK 600 FROM THE ELECTRON DENSITY. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 167 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 169 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 170 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 171 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 172 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 173 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 174 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 176 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 177 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 178 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 179 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 180 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 181 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 183 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 184 DBREF 1KHC A 219 365 UNP O88509 DNM3B_MOUSE 219 365 SEQRES 1 A 147 GLY ASP SER THR GLU TYR GLN ASP ASP LYS GLU PHE GLY SEQRES 2 A 147 ILE GLY ASP LEU VAL TRP GLY LYS ILE LYS GLY PHE SER SEQRES 3 A 147 TRP TRP PRO ALA MET VAL VAL SER TRP LYS ALA THR SER SEQRES 4 A 147 LYS ARG GLN ALA MET PRO GLY MET ARG TRP VAL GLN TRP SEQRES 5 A 147 PHE GLY ASP GLY LYS PHE SER GLU ILE SER ALA ASP LYS SEQRES 6 A 147 LEU VAL ALA LEU GLY LEU PHE SER GLN HIS PHE ASN LEU SEQRES 7 A 147 ALA THR PHE ASN LYS LEU VAL SER TYR ARG LYS ALA MET SEQRES 8 A 147 TYR HIS THR LEU GLU LYS ALA ARG VAL ARG ALA GLY LYS SEQRES 9 A 147 THR PHE SER SER SER PRO GLY GLU SER LEU GLU ASP GLN SEQRES 10 A 147 LEU LYS PRO MET LEU GLU TRP ALA HIS GLY GLY PHE LYS SEQRES 11 A 147 PRO THR GLY ILE GLU GLY LEU LYS PRO ASN LYS LYS GLN SEQRES 12 A 147 PRO GLU ASN LYS HET UNX A 163 1 HET UNX A 164 1 HET UNX A 165 1 HET UNX A 166 1 HET UNX A 167 1 HET UNX A 168 1 HET UNX A 169 1 HET UNX A 170 1 HET UNX A 171 1 HET UNX A 172 1 HET UNX A 173 1 HET UNX A 174 1 HET UNX A 175 1 HET UNX A 176 1 HET UNX A 177 1 HET UNX A 178 1 HET UNX A 179 1 HET UNX A 180 1 HET UNX A 181 1 HET UNX A 182 1 HET UNX A 183 1 HET UNX A 184 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 UNX 22(X) FORMUL 24 HOH *162(H2 O) HELIX 1 1 SER A 252 THR A 256 5 5 HELIX 2 2 ASP A 282 LEU A 287 5 6 HELIX 3 3 LEU A 289 PHE A 294 1 6 HELIX 4 4 ASN A 295 LEU A 302 1 8 HELIX 5 5 LEU A 302 GLY A 321 1 20 HELIX 6 6 SER A 331 GLY A 345 1 15 HELIX 7 7 THR A 350 LYS A 356 5 7 SHEET 1 A 5 PHE A 276 SER A 280 0 SHEET 2 A 5 MET A 265 TRP A 270 -1 N ARG A 266 O ILE A 279 SHEET 3 A 5 SER A 244 VAL A 251 -1 N MET A 249 O GLN A 269 SHEET 4 A 5 LEU A 235 ILE A 240 -1 N GLY A 238 O TRP A 246 SHEET 5 A 5 VAL A 285 ALA A 286 -1 O VAL A 285 N TRP A 237 LINK UNK UNX A 163 UNK UNX A 164 1555 1555 1.45 LINK UNK UNX A 163 UNK UNX A 165 1555 1555 1.20 LINK UNK UNX A 163 UNK UNX A 166 1555 1555 1.90 LINK UNK UNX A 164 UNK UNX A 165 1555 1555 2.17 LINK UNK UNX A 165 UNK UNX A 166 1555 1555 2.08 LINK UNK UNX A 167 UNK UNX A 168 1555 1555 1.86 LINK UNK UNX A 169 UNK UNX A 170 1555 1555 1.97 LINK UNK UNX A 170 UNK UNX A 171 1555 1555 1.93 LINK UNK UNX A 172 UNK UNX A 173 1555 1555 1.72 LINK UNK UNX A 173 UNK UNX A 174 1555 1555 1.65 LINK UNK UNX A 175 UNK UNX A 176 1555 1555 2.01 LINK UNK UNX A 178 UNK UNX A 181 1555 1555 1.88 LINK UNK UNX A 179 UNK UNX A 181 1555 1555 2.12 LINK UNK UNX A 182 UNK UNX A 183 1555 1555 2.19 CISPEP 1 LYS A 348 PRO A 349 0 0.25 SITE 1 AC1 4 UNX A 164 UNX A 165 UNX A 166 SER A 257 SITE 1 AC2 5 UNX A 163 UNX A 165 UNX A 166 PHE A 271 SITE 2 AC2 5 GLY A 272 SITE 1 AC3 5 UNX A 163 UNX A 164 UNX A 166 SER A 257 SITE 2 AC3 5 GLY A 274 SITE 1 AC4 7 HOH A 40 UNX A 163 UNX A 164 UNX A 165 SITE 2 AC4 7 GLN A 269 TRP A 270 GLY A 274 SITE 1 AC5 2 HOH A 100 UNX A 168 SITE 1 AC6 3 HOH A 61 UNX A 167 TRP A 342 SITE 1 AC7 4 HOH A 103 HOH A 120 UNX A 170 UNX A 171 SITE 1 AC8 3 UNX A 169 UNX A 171 LYS A 348 SITE 1 AC9 5 HOH A 88 HOH A 100 UNX A 169 UNX A 170 SITE 2 AC9 5 ALA A 297 SITE 1 BC1 4 UNX A 173 UNX A 174 LYS A 315 ARG A 319 SITE 1 BC2 3 HOH A 121 UNX A 172 UNX A 174 SITE 1 BC3 3 UNX A 172 UNX A 173 GLY A 233 SITE 1 BC4 5 HOH A 7 HOH A 130 UNX A 176 UNX A 177 SITE 2 BC4 5 LYS A 315 SITE 1 BC5 3 UNX A 175 UNX A 177 VAL A 318 SITE 1 BC6 3 UNX A 175 UNX A 176 LYS A 315 SITE 1 BC7 9 UNX A 179 UNX A 181 UNX A 182 UNX A 183 SITE 2 BC7 9 UNX A 184 GLY A 288 PHE A 290 SER A 291 SITE 3 BC7 9 GLN A 292 SITE 1 BC8 6 HOH A 60 UNX A 178 UNX A 180 UNX A 181 SITE 2 BC8 6 ASP A 282 GLN A 292 SITE 1 BC9 6 HOH A 85 HOH A 151 UNX A 179 UNX A 181 SITE 2 BC9 6 UNX A 184 GLY A 288 SITE 1 CC1 7 UNX A 178 UNX A 179 UNX A 180 UNX A 182 SITE 2 CC1 7 UNX A 183 UNX A 184 ASP A 282 SITE 1 CC2 6 UNX A 178 UNX A 181 UNX A 183 UNX A 184 SITE 2 CC2 6 ALA A 343 GLY A 346 SITE 1 CC3 6 UNX A 178 UNX A 181 UNX A 182 ASP A 282 SITE 2 CC3 6 SER A 291 HIS A 344 SITE 1 CC4 7 UNX A 178 UNX A 180 UNX A 181 UNX A 182 SITE 2 CC4 7 GLY A 288 PHE A 347 ILE A 352 CRYST1 52.750 52.750 186.860 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018957 0.010945 0.000000 0.00000 SCALE2 0.000000 0.021890 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005352 0.00000